View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14188_low_8 (Length: 414)
Name: NF14188_low_8
Description: NF14188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14188_low_8 |
 | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0038 (4 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 388; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 3280625 - 3281024
Alignment:
| Q |
1 |
ggaaaaaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3280625 |
ggaaaaaggttctattggttcttgatgacgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgat |
3280724 |
T |
|
| Q |
101 |
cattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttagg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3280725 |
cattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaca |
3280824 |
T |
|
| Q |
201 |
tggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3280825 |
tggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtat |
3280924 |
T |
|
| Q |
301 |
taggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatacttaaagt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3280925 |
taggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatacttaaagt |
3281024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 99 - 323
Target Start/End: Complemental strand, 17992333 - 17992109
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgctta |
198 |
Q |
| |
|
||||||||||||||||||||||| |||||| || ||||||||||| || || ||||||| |||||| |||||| |||||||||| |||||| || | | |
|
|
| T |
17992333 |
atcattaccactcgagacaaacatttgttaacatgtcatgggattaaaacaatatatgaagtagatggattaaatgaggaagaagctcttgaactgttaa |
17992234 |
T |
|
| Q |
199 |
ggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagt |
298 |
Q |
| |
|
|||||||||| |||||| | || || || |||| |||||| | | || ||||||| | ||| || |||||| ||||||| ||||| || |||||||| |
|
|
| T |
17992233 |
ggtggaaggcatttaaaggcaacgaaattgattctagttataactatattttaaaccgtgtagttaaatatgctgctggcctcccattagctttagaagt |
17992134 |
T |
|
| Q |
299 |
attaggttccaacttgtttggaaag |
323 |
Q |
| |
|
| | ||||||||||||||||||||| |
|
|
| T |
17992133 |
agtgggttccaacttgtttggaaag |
17992109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 17662502 - 17662555
Alignment:
| Q |
266 |
ttatgcttctggccttccattggcattagaagtattaggttccaacttgtttgg |
319 |
Q |
| |
|
|||||||||||||||||||||||| || |||||| ||||||| |||||||||| |
|
|
| T |
17662502 |
ttatgcttctggccttccattggctttggaagtaataggttctcacttgtttgg |
17662555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 17713528 - 17713581
Alignment:
| Q |
266 |
ttatgcttctggccttccattggcattagaagtattaggttccaacttgtttgg |
319 |
Q |
| |
|
|||||||||||||||||||||||| || |||||| ||||||| |||||||||| |
|
|
| T |
17713528 |
ttatgcttctggccttccattggctttggaagtaataggttctcacttgtttgg |
17713581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 17662239 - 17662316
Alignment:
| Q |
3 |
aaaaaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggttt |
80 |
Q |
| |
|
|||||||| || |||||||||||||||||| || || |||||||| | ||||| | || ||||||| |||||||||| |
|
|
| T |
17662239 |
aaaaaggtacttttggttcttgatgatgttgacaaagtgaagcagatacaagtacttgcaggagggcatgattggttt |
17662316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 170; Significance: 4e-91; HSPs: 39)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 6 - 395
Target Start/End: Complemental strand, 28097654 - 28097265
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||||||||| |||| || || |||| ||||||||||| |||||| | ||||||||| |||||||||| ||| ||| ||||| ||||| ||| |
|
|
| T |
28097654 |
aaggttctattgattctcgacgacattaataaattgaagcagctgcaagctatggctggagggactgattggtttggtgctggcagtagagtgattgtta |
28097555 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
|||||||||| ||| ||||| || ||||||||||||||||| |||||||||||| | | |||||||| ||| ||||||| |||||||||||||||||||| |
|
|
| T |
28097554 |
ccactcgagataaaaacttgctagcaagtcatgggattgaagtaacatatgaaacacacgagttaaacaagaaagaagcccttgaattgcttaggtggaa |
28097455 |
T |
|
| Q |
206 |
ggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggt |
305 |
Q |
| |
|
|||||||||| ||| |||||| |||||||||||||| || ||||||| ||| ||||||||||| |||||||||||||||| || ||| |||||||| |
|
|
| T |
28097454 |
ggcttttaaagctaaacaagttgattcaagttatgagtgtattttaaaccgtgcaataaattatgctgctggccttccattggccttggaaatattaggt |
28097355 |
T |
|
| Q |
306 |
tccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatactt |
395 |
Q |
| |
|
|||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||| | |||||||||| || |||||| |
|
|
| T |
28097354 |
tccaacttgtatggaaagcatatagaagaatggaattctttgttggatcgatatgaaagaattcctagtgaagagattcaaaaaatactt |
28097265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 86 - 400
Target Start/End: Original strand, 28140586 - 28140900
Alignment:
| Q |
86 |
tggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagca |
185 |
Q |
| |
|
||||||| |||| || |||| |||||||||||||| ||| || || ||||||||||||| ||| |||||| |||||| |||||||||||||||||| |
|
|
| T |
28140586 |
tggtagtcgggttgtcgttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagct |
28140685 |
T |
|
| Q |
186 |
cttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccat |
285 |
Q |
| |
|
|| || ||||| | |||||||| ||||||| ||| ||||| ||||||||||||||||| || ||||||| ||||| | |||||| ||||||||||||| |
|
|
| T |
28140686 |
ctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccat |
28140785 |
T |
|
| Q |
286 |
tggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattca |
385 |
Q |
| |
|
|||| ||||||||| | ||||| | ||||||||||||| ||| | | |||||||| ||| || ||||| ||||||||||||||| |||||||| | | |
|
|
| T |
28140786 |
tggctttagaagtagttggttctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcct |
28140885 |
T |
|
| Q |
386 |
gaagatacttaaagt |
400 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
28140886 |
gaagatacttaaagt |
28140900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 329
Target Start/End: Original strand, 28326449 - 28326772
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||||| ||| |||| ||||||||| ||||| ||||||| |||| || || |||||||| ||||||||||| || ||| ||||| |||||| ||| |
|
|
| T |
28326449 |
aaggttctgttgattctcgatgatgttcacgaactgaagcaattgcaggttttggctggaggacttgattggttcggtcctggcagtagagtgatcgtta |
28326548 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
|||||||||||||||| ||| || |||||| ||||||||| | |||||||||| | |||||| |||| |||||| ||||||||| | |||||||| |
|
|
| T |
28326549 |
ccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatatgaaattcctaagttaattaagagagaagctcttgaattgttgaggtggaa |
28326648 |
T |
|
| Q |
206 |
ggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggt |
305 |
Q |
| |
|
|||| |||| ||| |||| |||||| || ||| | || || || | ||||||| |||||||||||||||||||||||| ||||||||| | ||| |
|
|
| T |
28326649 |
tactttcaaaaataacaaagtcgattcaaattttgacggcattttatactgtgcagtaacttatgcttctggccttccattggctttagaagtagtgggt |
28326748 |
T |
|
| Q |
306 |
tccaacttgtttggaaagaatata |
329 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
28326749 |
tccaacttgtttggaaagaatata |
28326772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 329
Target Start/End: Original strand, 28504085 - 28504408
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||||| ||| |||| ||||||||| ||||| ||||||| |||| || || |||||||| ||||||||||| || ||| ||||| |||||| ||| |
|
|
| T |
28504085 |
aaggttctgttgattctcgatgatgttcacgaactgaagcaattgcaggttttggctggaggacttgattggttcggtcctggcagtagagtgatcgtta |
28504184 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
|||||||||||||||| ||| || |||||| ||||||||| | |||||||||| | |||||| |||| |||||| ||||||||| | |||||||| |
|
|
| T |
28504185 |
ccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatatgaaattcctaagttaattaagagagaagctcttgaattgttgaggtggaa |
28504284 |
T |
|
| Q |
206 |
ggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggt |
305 |
Q |
| |
|
|||| |||| ||| |||| |||||| || ||| | || || || | ||||||| |||||||||||||||||||||||| ||||||||| | ||| |
|
|
| T |
28504285 |
tactttcaaaaataacaaagtcgattcaaattttgacggcattttatactgtgcagtaacttatgcttctggccttccattggctttagaagtagtgggt |
28504384 |
T |
|
| Q |
306 |
tccaacttgtttggaaagaatata |
329 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
28504385 |
tccaacttgtttggaaagaatata |
28504408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 328
Target Start/End: Original strand, 28182089 - 28182411
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||||||||| |||| ||||||||| ||||| ||||||| |||| || || |||||||| ||||||||||| || |||||||| |||||||||| |
|
|
| T |
28182089 |
aaggttctattgattctagatgatgttcacgaactgaagcaattgcaggttttggctggaggaattgattggtttggtcctggtagtaaagtgatcatta |
28182188 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
||||||||||| |||| ||| || | |||||||||||||| | |||||||||||||| |||||||| || ||||||| ||||||||| | |||||| |
|
|
| T |
28182189 |
ccactcgagacgaacaattgctagtaggtcatgggattgaaagagcatatgaaatagataagttaaatgagaaagaagctcttgaattgttgaggtggtc |
28182288 |
T |
|
| Q |
206 |
ggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggt |
305 |
Q |
| |
|
||||| |||| ||| ||||| || | | || ||| | || || ||| ||||||| || ||| || | |||||||||||| ||||||||| | ||| |
|
|
| T |
28182289 |
tgctttcaaaattaacaaagttgatgcgaattttgacgtcattttacaccaagcagtaacttttgcatcagtccttccattggctttagaagtagtgggt |
28182388 |
T |
|
| Q |
306 |
tccaacttgtttggaaagaatat |
328 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
28182389 |
tccaacttgtttggaaagaatat |
28182411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 340
Target Start/End: Complemental strand, 28296951 - 28296617
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||| | ||| |||| ||||||||| | ||| ||||||| ||||||| || |||||| | |||||||||||| || |||| |||| |||||||||| |
|
|
| T |
28296951 |
aaggttttgttgattctagatgatgttcatgaactgaagcaattgcaagttttggctggacgacttgattggtttggtcttggaagtaaagtgatcatta |
28296852 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
|||||| ||| ||| | ||| || |||||||||||||| | ||||||||||| || |||||||| | ||||||| ||||||||| | || ||||| |
|
|
| T |
28296851 |
ccactcaagaaaaaaaattgctagatggtcatgggattgaaagagcatatgaaatacataagttaaatgacaaagaagctcttgaattgttgagatggaa |
28296752 |
T |
|
| Q |
206 |
ggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggt |
305 |
Q |
| |
|
||||| |||| ||| |||| || ||| || ||| || || || ||| || |||| |||||||||||||||||||||||| ||||||||| | ||| |
|
|
| T |
28296751 |
tgctttcaaaaataacaaagtcgatacaaattttgacgacattttacaccaggctgtaacttatgcttctggccttccattggctttagaagtagtgggt |
28296652 |
T |
|
| Q |
306 |
tccaacttgtttggaaagaatataaaagagtggaa |
340 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
28296651 |
tccaacttgtttggaaagaatataagagaatggaa |
28296617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 340
Target Start/End: Original strand, 28515122 - 28515456
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||| | ||| |||| ||||||||| | ||| ||||||| ||||||| || |||||| | |||||||||||| || |||| |||| |||||||||| |
|
|
| T |
28515122 |
aaggttttgttgattctagatgatgttcatgaactgaagcaattgcaagttttggctggacgacttgattggtttggtcttggaagtaaagtgatcatta |
28515221 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
|||||| ||| ||| | ||| || |||||||||||||| | ||||||||||| || |||||||| | ||||||| ||||||||| | || ||||| |
|
|
| T |
28515222 |
ccactcaagaaaaaaaattgctagatggtcatgggattgaaagagcatatgaaatacataagttaaatgacaaagaagctcttgaattgttgagatggaa |
28515321 |
T |
|
| Q |
206 |
ggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggt |
305 |
Q |
| |
|
||||| |||| ||| |||| || ||| || ||| || || || ||| || |||| |||||||||||||||||||||||| ||||||||| | ||| |
|
|
| T |
28515322 |
tgctttcaaaaataacaaagtcgatacaaattttgacgacattttacaccaggctgtaacttatgcttctggccttccattggctttagaagtagtgggt |
28515421 |
T |
|
| Q |
306 |
tccaacttgtttggaaagaatataaaagagtggaa |
340 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
28515422 |
tccaacttgtttggaaagaatataagagaatggaa |
28515456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 6 - 329
Target Start/End: Original strand, 28186364 - 28186688
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagc-aggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatt |
104 |
Q |
| |
|
|||||| | ||| |||| ||||||||| ||||| | |||| || || |||| || |||||||| || ||||||| || |||||||| ||||||||| |
|
|
| T |
28186364 |
aaggttttgttgattctcgatgatgttcacgaactaaagccagttggaagttttggctggaggatttcgttggtttggtcctggtagtattgtgatcatt |
28186463 |
T |
|
| Q |
105 |
accactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtgga |
204 |
Q |
| |
|
||||||||||||||||| ||| || | ||||||||||||| | ||||| || || || |||||||| || ||||||| ||||||||| | | ||||| |
|
|
| T |
28186464 |
accactcgagacaaacaattgctagctcatcatgggattgaaagagcatataaattacataagttaaatgagaaagaagctcttgaattgttgacgtgga |
28186563 |
T |
|
| Q |
205 |
aggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattagg |
304 |
Q |
| |
|
||||||| |||| ||| ||||| || ||| || || |||| || ||| ||||||| |||||||||||||||||||||||| ||||||||| | || |
|
|
| T |
28186564 |
aggctttaaaaaataacaaagttgatacaaatttcgacagcgttttacaccatgcagtaacttatgcttctggccttccattggctttagaagtagtggg |
28186663 |
T |
|
| Q |
305 |
ttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
28186664 |
ttccaacttgtttggaaagaatata |
28186688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 398
Target Start/End: Original strand, 29827014 - 29827349
Alignment:
| Q |
63 |
ggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatag |
162 |
Q |
| |
|
||||| |||||||||||| || ||| || | ||||||||||||||||||||| |||| ||| || |||||||||||||| | || |||| || ||| |
|
|
| T |
29827014 |
ggaggacttgattggtttggtcctggcagcatagtgatcattaccactcgagaccaacatttgctaacaagtcatgggattcatagaaaatatcaagtag |
29827113 |
T |
|
| Q |
163 |
atgagttaaataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagt |
262 |
Q |
| |
|
||| | |||||| | |||| | |||||||| |||||||||| ||||||||| || || | ||||||| ||||| || || || |||| ||| | |
|
|
| T |
29827114 |
atgcgctaaataggatagaatcccttgaattatttaggtggaaagcttttaaagatagtataggtgattcaagatatgatgacattttagaccgtgcaat |
29827213 |
T |
|
| Q |
263 |
aaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaa |
362 |
Q |
| |
|
| |||||||||||||||||| |||| |||||| || ||||| || |||||||||||||||||| |||| ||||| ||| | || ||| |||||||| |
|
|
| T |
29827214 |
agcttatgcttctggccttccgttggttttagaattagtaggtcccgcgttgtttggaaagaatatagaagaatggaaatctatattagatagatatgaa |
29827313 |
T |
|
| Q |
363 |
aggattcctaataaagagattcagaagatacttaaa |
398 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||| |
|
|
| T |
29827314 |
aggattcctaataaagagatccaaaatatacttaaa |
29827349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 400
Target Start/End: Original strand, 28243779 - 28244160
Alignment:
| Q |
19 |
ttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaa |
118 |
Q |
| |
|
|||| ||||||||| ||||| ||||||| |||| || ||||||||||| ||||||||||| || ||||||||| |||||| ||||||||||||||| |
|
|
| T |
28243779 |
ttctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgagacag |
28243878 |
T |
|
| Q |
119 |
acacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagt |
218 |
Q |
| |
|
||| ||| || |||||||||||||||| | |||||||| || | |||||||| || ||||| ||||||||| | |||||||| |||| |||| | |
|
|
| T |
28243879 |
acatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaatgagaccgaagctcttgaattgttgaggtggaattctttcaaaaat |
28243978 |
T |
|
| Q |
219 |
aagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttg |
318 |
Q |
| |
|
|| | || |||||| || || ||| || | ||||||| |||||||||||||||||||||||| ||||||||| | ||||| ||||| |||| |
|
|
| T |
28243979 |
aacaaggtggattcaaatttcgatggtgttttacggtgtgcagtaacttatgcttctggccttccattggctttagaagtagtgggttcaaacttatttg |
28244078 |
T |
|
| Q |
319 |
gaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatacttaaagt |
400 |
Q |
| |
|
|||| |||||| ||| ||||| ||| || ||||| ||| ||||||||| | |||| |||| ||| ||||||||||||| |
|
|
| T |
28244079 |
gaaataatataggagaatggaaatctgcattagatcggtatagaaggattccgattaaaaagatacaggagatacttaaagt |
28244160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 26636710 - 26636940
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgctta |
198 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| |||||||||| || | || ||| | ||| |||||||||||| |||| ||||||||| | | |
|
|
| T |
26636710 |
atcatcaccactcgagacaaacaattgttatcatctcatgggattaaatttttttacgaagcatatggtttaaataaggaacaagctcttgaattgttaa |
26636809 |
T |
|
| Q |
199 |
ggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagt |
298 |
Q |
| |
|
| |||||||||||||||||| || | ||||||| ||||| || || ||||||| ||||| || |||||||||||||||||||| || |||||||| |
|
|
| T |
26636810 |
gaacaaaggcttttaaaagtaagaaaaatgattcaagctatgattacattttaaaccgtgcagttaaatatgcttctggccttccattagctttagaagt |
26636909 |
T |
|
| Q |
299 |
attaggttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
| | |||||||||||||||||||||| |||| |
|
|
| T |
26636910 |
agtgggttccaacttgtttggaaagagtata |
26636940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 26742676 - 26742906
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgctta |
198 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| |||||||||| || | || ||| | ||| |||||||||||| |||| ||||||||| | | |
|
|
| T |
26742676 |
atcatcaccactcgagacaaacaattgttatcatctcatgggattaaatttttttacgaagcatatggtttaaataaggaacaagctcttgaattgttaa |
26742775 |
T |
|
| Q |
199 |
ggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagt |
298 |
Q |
| |
|
| |||||||||||||||||| || | ||||||| ||||| || || ||||||| ||||| || |||||||||||||||||||| || |||||||| |
|
|
| T |
26742776 |
gaacaaaggcttttaaaagtaagaaaaatgattcaagctatgattacattttaaaccgtgcagttaaatatgcttctggccttccattagctttagaagt |
26742875 |
T |
|
| Q |
299 |
attaggttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
| | |||||||||||||||||||||| |||| |
|
|
| T |
26742876 |
agtgggttccaacttgtttggaaagagtata |
26742906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 26950807 - 26951037
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgctta |
198 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| ||||||||||| || || ||||||| ||||| |||||||||||| |||| ||||||||| | | |
|
|
| T |
26950807 |
atcattaccactcgtgacaaacatttgttatcatgtcatgggattaaaaaaatatatgaagcagatggtttaaataaggaacaagctcttgaattgttaa |
26950906 |
T |
|
| Q |
199 |
ggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagt |
298 |
Q |
| |
|
| || ||||||||||||||| || | ||||||| ||||| || ||||||| ||||| || |||||| ||||||||||||| || |||||||| |
|
|
| T |
26950907 |
gaatgatggcttttaaaagtaacaaaaatgattcaaggtatgatagtattttaaaccgtgcagttaaatatgctgctggccttccattagctttagaagt |
26951006 |
T |
|
| Q |
299 |
attaggttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
| | ||||| |||||||||||||||| |||| |
|
|
| T |
26951007 |
agtgggttctaacttgtttggaaagactata |
26951037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 28227926 - 28228128
Alignment:
| Q |
9 |
gttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcattacca |
108 |
Q |
| |
|
||||||||| |||| ||||||||| || || | ||||| ||| || || |||||||| |||||||||||| || ||| |||| ||||||||||||| |
|
|
| T |
28227926 |
gttctattgattctcgatgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttggtcctggaagtaaagtgatcattacca |
28228025 |
T |
|
| Q |
109 |
ctcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggc |
208 |
Q |
| |
|
||||| ||||||| ||| || ||||||||||||||||| | |||||||||||||| |||||||| || | ||||| ||||||||| | |||||||| || |
|
|
| T |
28228026 |
ctcgaaacaaacaattgctagcaagtcatgggattgaaagagcatatgaaatagataagttaaatgagaacgaagctcttgaattgatgaggtggaacgc |
28228125 |
T |
|
| Q |
209 |
ttt |
211 |
Q |
| |
|
||| |
|
|
| T |
28228126 |
ttt |
28228128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 28235536 - 28235741
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||||| ||| |||| ||||||||| ||||| | ||||| |||| || || || |||| ||||||||||| || ||| |||| |||||||||| |
|
|
| T |
28235536 |
aaggttctgttgattctagatgatgttcacgaactaaagcaattgcaggttttggcgggagaaattgattggtttggtcctggaagtaaagtgatcatta |
28235635 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||||||| ||| || ||||||||| |||||||| || | ||||| ||||||||| | |||||||| |
|
|
| T |
28235636 |
ccactcgagacaaacaattgctagcaagtcatgggattgaaagaacgtacgaaatagataagttaaatgagaacgaagctcttgaattgttgaggtggaa |
28235735 |
T |
|
| Q |
206 |
ggcttt |
211 |
Q |
| |
|
|||||| |
|
|
| T |
28235736 |
ggcttt |
28235741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 26960188 - 26960419
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaac-atatgaaatagatgagttaaataaggaagaagcacttgaattgctt |
197 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| |||||||||| || || ||| ||| | ||| |||||||||||| |||| ||||||||| | |
|
|
| T |
26960188 |
atcattaccactagagacaaacaattgttatcatctcatgggattaaaaaaaatatacgaagcatatggtttaaataaggaacaagctcttgaattgtta |
26960287 |
T |
|
| Q |
198 |
aggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaag |
297 |
Q |
| |
|
|| |||||||||||||||||| || | ||||||| ||||| || || ||||||| ||||| || |||||||||||||||||||| || ||||||| |
|
|
| T |
26960288 |
agaacaaaggcttttaaaagtaagaaaaatgattcaagctatgattacattttaaaccgtgcagttaaatatgcttctggccttccattagctttagaag |
26960387 |
T |
|
| Q |
298 |
tattaggttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
|| | ||||||||||||||||| |||| |||| |
|
|
| T |
26960388 |
tagtgggttccaacttgtttggcaagagtata |
26960419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 99 - 321
Target Start/End: Original strand, 25074931 - 25075153
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgctta |
198 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| | || ||| ||| | ||| |||||||||||| |||| ||||||||| | | |
|
|
| T |
25074931 |
atcattaccactcgagacaaacatttgttatcatctcatgggattacaaaaatatacgaagcatatggtttaaataaggaacaagctcttgaattgttaa |
25075030 |
T |
|
| Q |
199 |
ggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagt |
298 |
Q |
| |
|
| ||||||||||||||||| || | ||||||| ||||| || || ||||||| ||| | || |||||||||||||||||||| || |||||||| |
|
|
| T |
25075031 |
gaacaaaggcttttaaaagtaaaaaaaatgattcaagctatgattacattttaaaccgtgcaattaaatatgcttctggccttccattagctttagaagt |
25075130 |
T |
|
| Q |
299 |
attaggttccaacttgtttggaa |
321 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
25075131 |
tgtgggttccaacttgtttggaa |
25075153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 26812583 - 26812831
Alignment:
| Q |
90 |
agtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacat--atgaaatagatgagttaaataaggaagaagcact |
187 |
Q |
| |
|
||||| || ||||||||||||||||||| ||| ||| ||||| |||||||||| ||||| || |||| |||||| |||||| | ||||||| || |
|
|
| T |
26812583 |
agtagagtcatcattaccactcgagacagacatttgctatcatgtcatgggat--aactagaatttatgacttagatggattaaatgacaaagaagctct |
26812680 |
T |
|
| Q |
188 |
tgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattg |
287 |
Q |
| |
|
||||||| ||| || ||| ||||||||||| | || ||||||||||||| || || |||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
26812681 |
tgaattgtttataaagatggcatttaaaagtaacataattgattcaagttatgattacattttaaatcgcgcagtaaaatatacttctggccttccatta |
26812780 |
T |
|
| Q |
288 |
gcattagaagtattaggttccaacttgtttggaaagaatataaaagagtgg |
338 |
Q |
| |
|
|| |||||||| | |||||||||||||||||||||| ||| |||||||| |
|
|
| T |
26812781 |
gctatagaagtagtgggttccaacttgtttggaaagagtattgaagagtgg |
26812831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 324
Target Start/End: Complemental strand, 27676704 - 27676513
Alignment:
| Q |
133 |
gtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattc |
232 |
Q |
| |
|
|||||||||| ||| |||||||| | |||| ||||| ||| || |||||| ||||||||| | ||||||||||||||||||| | || ||||| ||| |
|
|
| T |
27676704 |
gtcatgggatagaaaaaacatatgcagtagaagagttgaatgagacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttc |
27676605 |
T |
|
| Q |
233 |
aagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
||||||||| || || |||| || ||||| |||||||||||||||||||| || |||||||| | ||||| |||||||||||||||| |
|
|
| T |
27676604 |
aagttatgaagacattttaaagcgtgcagttgtatatgcttctggccttccattagcgatagaagtagtgggttctaacttgtttggaaaga |
27676513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 324
Target Start/End: Complemental strand, 27592178 - 27591914
Alignment:
| Q |
60 |
gctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaa |
159 |
Q |
| |
|
|||||||| ||||||||||| || ||| || || || ||||| ||||| ||||| |||||||| || |||||||||| ||| |||||||| | |
|
|
| T |
27592178 |
gctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactagactgtcatgggatagaaaaaacatatgcag |
27592079 |
T |
|
| Q |
160 |
tagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgc |
259 |
Q |
| |
|
|||| ||||| ||| | |||||| ||||||||| | ||||||||||||||||||| | || ||||| |||||||||||| || || |||| || || |
|
|
| T |
27592078 |
tagaagagttgaatgggacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttcaagttatgaagacattttaaagcgtgc |
27591979 |
T |
|
| Q |
260 |
agtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
||| |||||||||||||||||||| || |||||||| | ||||| |||||||||||||||| |
|
|
| T |
27591978 |
agttgtatatgcttctggccttccattagcgatagaagtagtgggttctaacttgtttggaaaga |
27591914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 334
Target Start/End: Original strand, 26849763 - 26850011
Alignment:
| Q |
86 |
tggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagca |
185 |
Q |
| |
|
|||||| || || ||||||||||||||||||||| ||||||||| |||||| ||| || || ||| ||| | ||| ||||| |||||| |||| |
|
|
| T |
26849763 |
tggtagcagagtcatcattaccactcgagacaaatgtttgttatcatctcatggaattaaaaaaatatacgaagcatatggtttaaacaaggaacaagct |
26849862 |
T |
|
| Q |
186 |
cttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccat |
285 |
Q |
| |
|
||||||||| | || |||| |||||||| |||| || | || |||| ||||| || || |||| || ||||| || ||||||||||||||||||| |
|
|
| T |
26849863 |
cttgaattggtaagaacgaagacttttaaatgtaacaaaactgatgcaagctatgattacattttaaatcgtgcagttaaatatgcttctggccttccat |
26849962 |
T |
|
| Q |
286 |
tggcattagaagtattaggttccaacttgtttggaaagaatataaaaga |
334 |
Q |
| |
|
| || ||||||||| | |||||||||||||||||||||| |||| |||| |
|
|
| T |
26849963 |
tagctttagaagtagtgggttccaacttgtttggaaagagtatagaaga |
26850011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 266 - 398
Target Start/End: Complemental strand, 29842943 - 29842811
Alignment:
| Q |
266 |
ttatgcttctggccttccattggcattagaagtattaggttccaactt-gtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaag |
364 |
Q |
| |
|
|||||||||||||||||| |||| |||||| || ||||| ||| ||| |||||||||||||||| |||| ||||| ||| || ||| | |||||||| |
|
|
| T |
29842943 |
ttatgcttctggccttccgttggttttagaattagtaggt-ccagctttgtttggaaagaatatagaagaatggaaatctacattagataggtatgaaag |
29842845 |
T |
|
| Q |
365 |
gattcctaataaagagattcagaagatacttaaa |
398 |
Q |
| |
|
|||||||||||||||||| || || ||||||||| |
|
|
| T |
29842844 |
gattcctaataaagagatccacaatatacttaaa |
29842811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 400
Target Start/End: Original strand, 26624424 - 26624636
Alignment:
| Q |
188 |
tgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattg |
287 |
Q |
| |
|
||||||| | ||||||| ||||||||||||| | ||||| |||| ||||||| || || ||||||| ||||| ||||||||||||||||| || |
|
|
| T |
26624424 |
tgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaaccgtgcagttgcatatgcttctggccttccgtta |
26624523 |
T |
|
| Q |
288 |
gcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcaga |
387 |
Q |
| |
|
| |||||| | | |||||||||||||||||||||| ||| |||| ||||| | | || ||| | ||||| |||||||| ||||||||||| || | |
|
|
| T |
26624524 |
gttttagaaattgtgggttccaacttgtttggaaagagcatagaagaatggaagtatacattagatgggtatgacaggattcccaataaagagatccaaa |
26624623 |
T |
|
| Q |
388 |
agatacttaaagt |
400 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26624624 |
agatacttaaagt |
26624636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 400
Target Start/End: Original strand, 26730401 - 26730613
Alignment:
| Q |
188 |
tgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattg |
287 |
Q |
| |
|
||||||| | ||||||| ||||||||||||| | ||||| |||| ||||||| || || ||||||| ||||| ||||||||||||||||| || |
|
|
| T |
26730401 |
tgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaaccgtgcagttgcatatgcttctggccttccgtta |
26730500 |
T |
|
| Q |
288 |
gcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcaga |
387 |
Q |
| |
|
| |||||| | | |||||||||||||||||||||| ||| |||| ||||| | | || ||| | ||||| |||||||| ||||||||||| || | |
|
|
| T |
26730501 |
gttttagaaattgtgggttccaacttgtttggaaagagcatagaagaatggaagtatacattagatgggtatgacaggattcccaataaagagatccaaa |
26730600 |
T |
|
| Q |
388 |
agatacttaaagt |
400 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26730601 |
agatacttaaagt |
26730613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 323
Target Start/End: Original strand, 26938097 - 26938317
Alignment:
| Q |
103 |
ttaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtg |
202 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |||||||||||||| || ||||| | |||||| ||||| |||||||||| |||||| | ||||||| |
|
|
| T |
26938097 |
ttaccactcgagacaaacatttgctatcatgtcatgggattgaaagaatatatgtagtagatggcttaaaggaggaagaagctcttgaactatttaggtg |
26938196 |
T |
|
| Q |
203 |
gaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtatta |
302 |
Q |
| |
|
|| |||||| ||||| || || || | ||||||| | | | ||||||| ||| | || || ||||||||||||||||| || |||||||| || |
|
|
| T |
26938197 |
gatggctttcaaaagcaacaaaattgaaccaagttagtatgatataataaaccgtgcaattaaatacgcttctggccttccattagctttagaagttgta |
26938296 |
T |
|
| Q |
303 |
ggttccaacttgtttggaaag |
323 |
Q |
| |
|
|||||| | |||||||||||| |
|
|
| T |
26938297 |
ggttcccatttgtttggaaag |
26938317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 401
Target Start/End: Original strand, 28240379 - 28240723
Alignment:
| Q |
60 |
gctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatca---agtcatgggattgaactaacatatg |
156 |
Q |
| |
|
|||||||||||||||||||| ||| || || || || |||||||||||||||||||||| ||| || || ||||| || ||||| ||| |||| |
|
|
| T |
28240379 |
gctggagggcttgattggttcagtcctgacagcagagtcatcattaccactcgagacaaacgtttgctaacatgcagtcacagggttgaaacaacctatg |
28240478 |
T |
|
| Q |
157 |
aaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccg |
256 |
Q |
| |
|
|| | ||| ||||||| || |||||| |||||||| | | ||||||||| ||||||||||| ||| |||||||||| || || ||||| | |
|
|
| T |
28240479 |
aagtggattggttaaatgtggcagaagctcttgaattattgacgtggaaggcatttaaaagtaacagagtccattcaagttacaagtacattctaccatg |
28240578 |
T |
|
| Q |
257 |
cgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcga |
356 |
Q |
| |
|
||| ||| ||||||||||||||| ||||| || ||||||||| | |||||||||||||||||| ||||| ||| ||| | || || || | |
|
|
| T |
28240579 |
tgcaataacttatgcttctggcctaccattagctttagaagtagttggttccaacttgtttggattagatataggagaatgggaatccacattagaccag |
28240678 |
T |
|
| Q |
357 |
tatgaaaggattcctaataaagagattcagaagatacttaaagtt |
401 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||||||||||||| |
|
|
| T |
28240679 |
tatgaaaggattccaaataaagagatccaaaagatacttaaagtt |
28240723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 26892804 - 26892649
Alignment:
| Q |
3 |
aaaaaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatca |
102 |
Q |
| |
|
|||| ||||||||||||| | ||||||||| ||||||| ||||| ||||| || | ||||| || || ||||||||| || |||||||| | |||||| |
|
|
| T |
26892804 |
aaaagggttctattggttttagatgatgttgacgaattaaagcaactgcaattcattgctggtggactcgattggtttggtattggtagtcgagtgatcg |
26892705 |
T |
|
| Q |
103 |
ttaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaa |
158 |
Q |
| |
|
|||| |||||||||| | | ||| || |||||||| |||||| |||||||||| |
|
|
| T |
26892704 |
ttactactcgagacagaaatttgctagcaagtcatcatattgaaaaaacatatgaa |
26892649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 329
Target Start/End: Complemental strand, 27664181 - 27664102
Alignment:
| Q |
250 |
taaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
||||||| ||||| | |||||||||||||||||||| || ||| ||||| | |||||||||||||||||||||| |||| |
|
|
| T |
27664181 |
taaaccgtgcagttgaatatgcttctggccttccattagctttaaaagtagtgggttccaacttgtttggaaagagtata |
27664102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 324
Target Start/End: Original strand, 26824963 - 26825108
Alignment:
| Q |
179 |
agaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggc |
278 |
Q |
| |
|
|||||| ||||||||| | ||||||| ||||||||||| ||| |||| ||||||||||| ||| || ||||||| ||||| |||||||| ||| |
|
|
| T |
26824963 |
agaagctcttgaattgttaaggtggatggcttttaaaaataacaaagtaccgtcaagttatgaacacattttaaaccgtgcagtttcatatgcttcgggc |
26825062 |
T |
|
| Q |
279 |
cttccattggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
||||| || | ||||||| || | |||||||| ||||||||||||| |
|
|
| T |
26825063 |
cttcccttagtattagaaatagtgggttccaatttgtttggaaaga |
26825108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 26862602 - 26862669
Alignment:
| Q |
57 |
ttagctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacactt |
124 |
Q |
| |
|
||||||||||| |||||||||||| || ||| ||||| || ||||||||||||||||| |||||||| |
|
|
| T |
26862602 |
ttagctggaggacttgattggtttggtcatggaagtagagtcatcattaccactcgagataaacactt |
26862669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 396
Target Start/End: Complemental strand, 27705285 - 27705075
Alignment:
| Q |
186 |
cttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccat |
285 |
Q |
| |
|
||||||||| | ||||||| ||||||||||| | | | ||| |||| ||||||| || || ||||||| ||||| ||||||||||||||||| | |
|
|
| T |
27705285 |
cttgaattgttgaggtggatggcttttaaaaatgacaacgttccttcaggttatgaagacattttaaaccgtgcagttgcatatgcttctggccttccgt |
27705186 |
T |
|
| Q |
286 |
tggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattca |
385 |
Q |
| |
|
| | ||||||||| | ||||| ||||||||||| ||||| ||| |||| ||||| | || ||| | ||||| |||||||| ||||||||||| || |
|
|
| T |
27705185 |
tagttttagaagtaatgggttctaacttgtttggcaagaacatagaagaatggaagaatacattagatgggtatgacaggattcccaataaagagatcca |
27705086 |
T |
|
| Q |
386 |
gaagatactta |
396 |
Q |
| |
|
|||||||||| |
|
|
| T |
27705085 |
aaagatactta |
27705075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 400
Target Start/End: Original strand, 28787433 - 28787603
Alignment:
| Q |
230 |
ttcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
|||||||||||| ||||| |||| || ||||| ||||||||| |||||||| || | |||||| || | |||||||||||||||||||||| ||| |
|
|
| T |
28787433 |
ttcaagttatgaagacgttttaaatcgtgcagtttcttatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgata |
28787532 |
T |
|
| Q |
330 |
aaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatacttaaagt |
400 |
Q |
| |
|
|||| ||||| | || ||| ||||||||| |||||| |||||| |||| || ||||||||||||| |
|
|
| T |
28787533 |
gaagaatggaagggtactttagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagt |
28787603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 29477032 - 29476962
Alignment:
| Q |
250 |
taaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttgga |
320 |
Q |
| |
|
||||||| ||||||| ||||||||| || ||||||||||| || |||||| ||||||| | |||||||||| |
|
|
| T |
29477032 |
taaaccgagcagtaacttatgcttccgggcttccattggccttggaagtaataggttcaagcttgtttgga |
29476962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 396
Target Start/End: Complemental strand, 27697500 - 27697407
Alignment:
| Q |
303 |
ggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatactta |
396 |
Q |
| |
|
||||| ||||||||||||||||| ||| |||| ||||| | | | || ||| | ||||| |||||||| ||||||||||| || |||||||||| |
|
|
| T |
27697500 |
ggttctaacttgtttggaaagaacatagaagaatggaagtatatattagatgggtatgacaggattcccaataaagagatccaaaagatactta |
27697407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 26976015 - 26976062
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaa |
146 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| ||||| |||||||| |
|
|
| T |
26976015 |
atcattaccactcgagacaaacaattgctatcaggtcatcggattgaa |
26976062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 26978612 - 26978674
Alignment:
| Q |
267 |
tatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatata |
329 |
Q |
| |
|
||||||||||| |||||||| || ||||||||| | ||||| | |||||||||||||| |||| |
|
|
| T |
26978612 |
tatgcttctggtcttccattagctttagaagtagtgggttcaagcttgtttggaaagagtata |
26978674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 25492437 - 25492320
Alignment:
| Q |
99 |
atcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgctta |
198 |
Q |
| |
|
|||||||||||||||||||||||| | || | ||||||||||| ||| | ||| | |||| ||||| || ||||||||| ||||||||||||| |
|
|
| T |
25492437 |
atcattaccactcgagacaaacacatactaaccagtcatgggatagaaagtatgcatgcagtagaagagttgcatggggaagaagctcttgaattgctta |
25492338 |
T |
|
| Q |
199 |
ggtggaaggcttttaaaa |
216 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
25492337 |
tgtggatggcttttaaaa |
25492320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 28782159 - 28782208
Alignment:
| Q |
93 |
agggtgatcattaccactcgagacaaacacttgttatcaagtcatgggat |
142 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
28782159 |
agggtcatcattaccactcgagacaaacacttactaagaagtcatgggat |
28782208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 26885095 - 26885159
Alignment:
| Q |
60 |
gctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacactt |
124 |
Q |
| |
|
|||||||| |||||||||||| || ||| || ||||| |||||||||||||| || |||||||| |
|
|
| T |
26885095 |
gctggaggacttgattggtttggtcgtggaagcagggtcatcattaccactcgtgataaacactt |
26885159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 6 - 400
Target Start/End: Complemental strand, 57505 - 57111
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||| | ||| |||| ||||||||| |||| ||||||| | || || || |||||||| |||||||||||| || |||||||| |||||||||| |
|
|
| T |
57505 |
aaggttttgttgattctcgatgatgttcacgagctgaagcaattacaggttttggctggaggacttgattggtttggtcctggtagtaaagtgatcatta |
57406 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
||||||||||| |||| ||| || || |||||||||||||| | |||||||||||||| |||||||| || ||||||| ||||||||| | |||||||| |
|
|
| T |
57405 |
ccactcgagacgaacaattgctagcaggtcatgggattgaaagagcatatgaaatagataagttaaatgagaaagaagctcttgaattgttgaggtggaa |
57306 |
T |
|
| Q |
206 |
ggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggt |
305 |
Q |
| |
|
||||| |||| ||| |||| ||| ||| || || ||||| || ||| ||||||| ||||||||| |||||||||||||| ||||||||| | ||| |
|
|
| T |
57305 |
tgctttcaaaaataacaaagtcaatccaaatttcgacaacgttttacaccttgcagtaacttatgcttcaggccttccattggccttagaagtagtgggt |
57206 |
T |
|
| Q |
306 |
tccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatacttaaagt |
400 |
Q |
| |
|
|| ||||||||||||||||||||| ||| ||||| ||| || ||| |||||||||||||| | |||| |||| || ||||||||||||| |
|
|
| T |
57205 |
tcgaacttgtttggaaagaatataggagaatggaaatctgcattaaatcagtatgaaaggattcccattaaaaagatccaagagatacttaaagt |
57111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 86; Significance: 6e-41; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 71 - 396
Target Start/End: Complemental strand, 5090096 - 5089771
Alignment:
| Q |
71 |
tgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagtta |
170 |
Q |
| |
|
|||||||||| || |||| || || || ||||||||||||||||||||||||||| || | ||||||||||||| ||||||| ||| |||||| ||| |
|
|
| T |
5090096 |
tgattggtttggtcttggcagcagagtcatcattaccactcgagacaaacacttgctaaaatgtcatgggattgatataacatacgaagtagatggttta |
5089997 |
T |
|
| Q |
171 |
aataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatg |
270 |
Q |
| |
|
||| || | ||||| ||| |||| | ||||||||||||||||||| || |||||| |||||||||| || ||||||| | |||| ||||| |
|
|
| T |
5089996 |
aatgagaacgaagctcttcaattattaaggtggaaggcttttaaaaatagtactgttaatccaagttatgaaggaattttaaaccgtgtggtaacttatg |
5089897 |
T |
|
| Q |
271 |
cttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcc |
370 |
Q |
| |
|
||||||||||||||||||| |||||||| | |||||||| |||||||||||| ||||| || | ||||| ||||| | ||| |||||||||||||| |
|
|
| T |
5089896 |
cttctggccttccattggctttagaagttgtgggttccaatttgtttggaaaggatatagaaaaatggaaatctttactagatgagtatgaaaggattcc |
5089797 |
T |
|
| Q |
371 |
taataaagagattcagaagatactta |
396 |
Q |
| |
|
||||||||| || || |||||||||| |
|
|
| T |
5089796 |
taataaagaaatccaaaagatactta |
5089771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 18678587 - 18678445
Alignment:
| Q |
186 |
cttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccat |
285 |
Q |
| |
|
||||||||| | ||||||| ||||||||||||| | ||||| |||||||||||| | || |||| || ||||| ||||||||||||||||||| |
|
|
| T |
18678587 |
cttgaattgttgaggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaacgtgcagttgtgtatgcttctggccttccat |
18678488 |
T |
|
| Q |
286 |
tggcattagaagtattaggttccaacttgtttggaaagaatat |
328 |
Q |
| |
|
| || |||||||| | |||||||||||||||||||||||||| |
|
|
| T |
18678487 |
tagctatagaagtagtgggttccaacttgtttggaaagaatat |
18678445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 18688653 - 18688515
Alignment:
| Q |
186 |
cttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccat |
285 |
Q |
| |
|
||||||||| | ||||||| ||||||||||||| | ||||| |||||||||||| | || ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
18688653 |
cttgaattgttgaggtggatggcttttaaaagttataaagttccttcaagttatgaagagattttaaaccgtgcagtcgtgtatgcttctggccttccat |
18688554 |
T |
|
| Q |
286 |
tggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
| || |||||||| | |||||||||||||||||||||| |
|
|
| T |
18688553 |
tagctatagaagtagtgggttccaacttgtttggaaaga |
18688515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 18723112 - 18722974
Alignment:
| Q |
186 |
cttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccat |
285 |
Q |
| |
|
||||||||| | ||||||| ||||||||||||| | ||||| |||||||||||| | || ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
18723112 |
cttgaattgttgaggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaccgagcagttgcgtatgcttctggccttccat |
18723013 |
T |
|
| Q |
286 |
tggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
| || |||||||| | |||||||||||||||||||||| |
|
|
| T |
18723012 |
tagctatagaagtagtgggttccaacttgtttggaaaga |
18722974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 18654504 - 18654366
Alignment:
| Q |
186 |
cttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccat |
285 |
Q |
| |
|
||||||||| | ||||||| ||||||||||| | | ||||| |||||||||||| | || ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
18654504 |
cttgaattgttgaggtggatggcttttaaaatttacaaagttccttcaagttatgaagagattttaaaccgtgcagttgcgtatgcttctggccttccat |
18654405 |
T |
|
| Q |
286 |
tggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
| || ||||||| | |||||||||||||||||||||| |
|
|
| T |
18654404 |
tagctatagaagtcgtgggttccaacttgtttggaaaga |
18654366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 18698346 - 18698289
Alignment:
| Q |
267 |
tatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
|||||||||||||||||||| || |||||||| | |||||||||||||||||||||| |
|
|
| T |
18698346 |
tatgcttctggccttccattagctctagaagtagtgggttccaacttgtttggaaaga |
18698289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 18730450 - 18730393
Alignment:
| Q |
267 |
tatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
|||||||||||||||||||| || |||||||| | |||||||||||||||||||||| |
|
|
| T |
18730450 |
tatgcttctggccttccattagctctagaagtagtgggttccaacttgtttggaaaga |
18730393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 90 - 323
Target Start/End: Original strand, 26136943 - 26137176
Alignment:
| Q |
90 |
agtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttg |
189 |
Q |
| |
|
||||| || ||||||||||| ||||||||||| ||| ||||| ||||||||||| || || ||||||| | ||| ||||||||||| ||||| |||| |
|
|
| T |
26136943 |
agtagagtcatcattaccacccgagacaaacatttgctatcatgtcatgggattaaaagaatatatgaagtcgatttcttaaataaggatgaagctcttg |
26137042 |
T |
|
| Q |
190 |
aattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggc |
289 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| || | | ||||||||||| | || ||||| | ||||| || ||||||||||||||||| || || |
|
|
| T |
26137043 |
aattgtttaggtggatggcttttaaaagtaaccacaatgactcaagttatgattatattttaaacagtgcagttaaatatgcttctggccttccgttagc |
26137142 |
T |
|
| Q |
290 |
attagaagtattaggttccaacttgtttggaaag |
323 |
Q |
| |
|
||||||||| | ||||||| ||||||||||||| |
|
|
| T |
26137143 |
tttagaagtagtgggttccagcttgtttggaaag |
26137176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 28126711 - 28126568
Alignment:
| Q |
181 |
aagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggcct |
280 |
Q |
| |
|
|||||||||||||| | ||||||| |||||||||| ||| ||||| |||||||||||| | ||| ||||||| ||||| |||||||| ||||| |
|
|
| T |
28126711 |
aagcacttgaattgttgaggtggatggcttttaaacataacaaagttccttcaagttatgatgatgttttaaaccgggcagtttcatatgcttcaggcct |
28126612 |
T |
|
| Q |
281 |
tccattggcattagaagtattaggttccaacttgtttggaaaga |
324 |
Q |
| |
|
||| || | ||||| || | ||||||||||| |||||||||| |
|
|
| T |
28126611 |
tcccttagttatagaaatagtgggttccaacttatttggaaaga |
28126568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 28163533 - 28163469
Alignment:
| Q |
60 |
gctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacactt |
124 |
Q |
| |
|
|||||||| || |||||||| || ||| || ||||| |||||||||||||||||||||||||| |
|
|
| T |
28163533 |
gctggaggactcgattggttcggtcgtggaagcagggtcatcattaccactcgagacaaacactt |
28163469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 400
Target Start/End: Original strand, 43941 - 44322
Alignment:
| Q |
19 |
ttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaa |
118 |
Q |
| |
|
|||| ||||||||| ||||| ||||||| |||| || ||||||||||| ||||||||||| || ||||||||| |||||| ||||||||||||||| |
|
|
| T |
43941 |
ttctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgagacag |
44040 |
T |
|
| Q |
119 |
acacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagt |
218 |
Q |
| |
|
||| ||| || |||||||||||||||| | |||||||| || | |||||||| || ||||| ||||||||| | |||||||| |||| |||| | |
|
|
| T |
44041 |
acatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaatgagaccgaagctcttgaattgttgaggtggaattctttcaaaaat |
44140 |
T |
|
| Q |
219 |
aagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttg |
318 |
Q |
| |
|
|| | || |||||| || || ||| || | ||||||| |||||||||||||||||||||||| ||||||||| | ||||| ||||| |||| |
|
|
| T |
44141 |
aacaaggtggattcaaatttcgatggtgttttacggtgtgcagtaacttatgcttctggccttccattggctttagaagtagtgggttcaaacttatttg |
44240 |
T |
|
| Q |
319 |
gaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatacttaaagt |
400 |
Q |
| |
|
|||| |||||| ||| ||||| ||| || ||||| ||| ||||||||| | |||| |||| ||| ||||||||||||| |
|
|
| T |
44241 |
gaaataatataggagaatggaaatctgcattagatcggtatagaaggattccgattaaaaagatacaggagatacttaaagt |
44322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 28424 - 28626
Alignment:
| Q |
9 |
gttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcattacca |
108 |
Q |
| |
|
||||||||| |||| ||||||||| || || | ||||| ||| || || |||||||| |||||||||||| || ||| |||| ||||||||||||| |
|
|
| T |
28424 |
gttctattgattctcgatgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttggtcctggaagtaaagtgatcattacca |
28523 |
T |
|
| Q |
109 |
ctcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggc |
208 |
Q |
| |
|
||||| ||||||| ||| || ||||||||||||||||| | |||||||||||||| |||||||| || | ||||| ||||||||| | |||||||| || |
|
|
| T |
28524 |
ctcgaaacaaacaattgctagcaagtcatgggattgaaagagcatatgaaatagataagttaaatgagaacgaagctcttgaattgatgaggtggaacgc |
28623 |
T |
|
| Q |
209 |
ttt |
211 |
Q |
| |
|
||| |
|
|
| T |
28624 |
ttt |
28626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 35698 - 35903
Alignment:
| Q |
6 |
aaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgatcatta |
105 |
Q |
| |
|
|||||||| ||| |||| ||||||||| ||||| | ||||| |||| || || || |||| ||||||||||| || ||| |||| |||||||||| |
|
|
| T |
35698 |
aaggttctgttgattctagatgatgttcacgaactaaagcaattgcaggttttggcgggagaaattgattggtttggtcctggaagtaaagtgatcatta |
35797 |
T |
|
| Q |
106 |
ccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaa |
205 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||||||| ||| || ||||||||| |||||||| || | ||||| ||||||||| | |||||||| |
|
|
| T |
35798 |
ccactcgagacaaacaattgctagcaagtcatgggattgaaagaacgtacgaaatagataagttaaatgagaacgaagctcttgaattgttgaggtggaa |
35897 |
T |
|
| Q |
206 |
ggcttt |
211 |
Q |
| |
|
|||||| |
|
|
| T |
35898 |
ggcttt |
35903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 401
Target Start/End: Original strand, 40541 - 40885
Alignment:
| Q |
60 |
gctggagggcttgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatca---agtcatgggattgaactaacatatg |
156 |
Q |
| |
|
|||||||||||||||||||| ||| || || || || |||||||||||||||||||||| ||| || || ||||| || ||||| ||| |||| |
|
|
| T |
40541 |
gctggagggcttgattggttcagtcctgacagcagagtcatcattaccactcgagacaaacgtttgctaacatgcagtcacagggttgaaacaacctatg |
40640 |
T |
|
| Q |
157 |
aaatagatgagttaaataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccg |
256 |
Q |
| |
|
|| | ||| ||||||| || |||||| |||||||| | | ||||||||| ||||||||||| ||| |||||||||| || || ||||| | |
|
|
| T |
40641 |
aagtggattggttaaatgtggcagaagctcttgaattattgacgtggaaggcatttaaaagtaacagagtccattcaagttacaagtacattctaccatg |
40740 |
T |
|
| Q |
257 |
cgcagtaaattatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcga |
356 |
Q |
| |
|
||| ||| ||||||||||||||| ||||| || ||||||||| | |||||||||||||||||| ||||| ||| ||| | || || || | |
|
|
| T |
40741 |
tgcaataacttatgcttctggcctaccattagctttagaagtagttggttccaacttgtttggattagatataggagaatgggaatccacattagaccag |
40840 |
T |
|
| Q |
357 |
tatgaaaggattcctaataaagagattcagaagatacttaaagtt |
401 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||||||||||||| |
|
|
| T |
40841 |
tatgaaaggattccaaataaagagatccaaaagatacttaaagtt |
40885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 400
Target Start/End: Original strand, 16691904 - 16692232
Alignment:
| Q |
72 |
gattggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaa |
171 |
Q |
| |
|
||||||||| || ||| ||||| || |||||||||||||||||||||||||| || |||||||||| ||||| || ||||||| | |||| |||| |
|
|
| T |
16691904 |
gattggtttggtcctggaagtagagtcatcattaccactcgagacaaacacttactaacaagtcatggtattgatagaatatatgaagtggatggtttaa |
16692003 |
T |
|
| Q |
172 |
ataaggaagaagcacttgaattgcttaggtggaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgc |
271 |
Q |
| |
|
|| |||||||| || ||| | | ||||||||| ||||||||| ||| |||| ||||||||| ||| || || |||| | |||| |||||| |
|
|
| T |
16692004 |
atggagaagaagctctagaactattgaggtggaagacttttaaaaataacaaagtcgattcaagtttcgagtacattttaaaatatgttgtaacttatgc |
16692103 |
T |
|
| Q |
272 |
ttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcct |
371 |
Q |
| |
|
||||||||||||||| || ||||||||| |||| || ||||||||||||||||||||| |||| ||||| ||| || |||||||||||| |||||||| |
|
|
| T |
16692104 |
ttctggccttccattagctttagaagtagtaggatctaacttgtttggaaagaatatagaagaatggaaatctacatttgatcgatatgaatggattcct |
16692203 |
T |
|
| Q |
372 |
aataaagagattcagaagatacttaaagt |
400 |
Q |
| |
|
|||| ||||| || ||||||||||| |
|
|
| T |
16692204 |
ggtaaacgaattcacaaaatacttaaagt |
16692232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 3858 - 3787
Alignment:
| Q |
71 |
tgattggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggat |
142 |
Q |
| |
|
|||||||||| | |||| || ||||| ||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
3858 |
tgattggtttggccttggaagcagggtcatcattaccactcgagacaaacacttgctaagaagtcatgggat |
3787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 12799 - 12750
Alignment:
| Q |
93 |
agggtgatcattaccactcgagacaaacacttgttatcaagtcatgggat |
142 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
12799 |
agggtcatcattaccactcgagacaaacacttactaagaagtcatgggat |
12750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 16372340 - 16372295
Alignment:
| Q |
2 |
gaaaaaggttctattggttcttgatgatgttaacgaattgaagcag |
47 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
16372340 |
gaaaaaggttcttttggttcttgatgatgttaacaaattgatgcag |
16372295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 400
Target Start/End: Original strand, 31906285 - 31906419
Alignment:
| Q |
266 |
ttatgcttctggccttccattggcattagaagtattaggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaagg |
365 |
Q |
| |
|
|||||||||||| ||||||||||| || ||| | |||||||| || ||||||||||||||| |||| ||| | ||| || |||||||||||| |
|
|
| T |
31906285 |
ttatgcttctggacttccattggctttgatagttattggttccaatttatttggaaagaatatacaagaatgggaatctgcattacatcgatatgaaatc |
31906384 |
T |
|
| Q |
366 |
attcctaataaagagattcagaagatacttaaagt |
400 |
Q |
| |
|
||||| ||||||||||| || || ||||| ||||| |
|
|
| T |
31906385 |
attccaaataaagagatccaaaatatactcaaagt |
31906419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 16441022 - 16441179
Alignment:
| Q |
1 |
ggaaaaaggttctattggttcttgatgatgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggtttagtgttggtagtagggtgat |
100 |
Q |
| |
|
||||||||||||| ||||||||||| |||||| || || || ||||| | | || | | ||| ||| |||||||| | || |||||| || || || |
|
|
| T |
16441022 |
ggaaaaaggttcttttggttcttgacgatgttgacaaaatggagcagattgaggttattgtgggaaggcctgattggtatggtcctggtagcagagttat |
16441121 |
T |
|
| Q |
101 |
cattaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaa |
158 |
Q |
| |
|
|||||| ||||| |||||||| ||| || ||||||||||| ||||| |||||||||| |
|
|
| T |
16441122 |
cattacaactcgggacaaacagttgctagcaagtcatggggttgaaagaacatatgaa |
16441179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 8545 - 8594
Alignment:
| Q |
93 |
agggtgatcattaccactcgagacaaacacttgttatcaagtcatgggat |
142 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
8545 |
agggtcatcattaccactcgagacaaacacttactaagaagtcatgggat |
8594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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