View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14188_low_9 (Length: 254)
Name: NF14188_low_9
Description: NF14188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14188_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 5898073 - 5898253
Alignment:
| Q |
18 |
agattatagttggattatatatttgtttatacatttttatatactaattatgtaactaagttgagatcaaatagttgatgaatttcaattaaagatgaat |
117 |
Q |
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| T |
5898073 |
agattatagttggattatatatttgtttatacatttttatatatcaattatgtaactaagttgagatcaaatagttgatgagttttaattaaagatgaat |
5898172 |
T |
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| Q |
118 |
cgtttnnnnnnnttgaaacttgaatcctgactataatagttattgatcaaattttatttacatttaattgaactatttact |
198 |
Q |
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| T |
5898173 |
cgtttaaaaaaactaaaatttaaattctgactataataattattgatcaaactttatttacatttaattgatctatttact |
5898253 |
T |
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