View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1418_low_10 (Length: 304)
Name: NF1418_low_10
Description: NF1418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1418_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 117 - 300
Target Start/End: Original strand, 31957034 - 31957217
Alignment:
| Q |
117 |
ggttacataatggagtttatatttaatgtcaaatgttgcttttttgtgtctgtgtttatagttttttcttctgtctatttcatatctaatgcaattagat |
216 |
Q |
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| T |
31957034 |
ggttacataatggagtttatatttaatgtcaaatgttgcttttttgtgtctgcgtttatagttttttcttctatatatttcatatctaatgcaattagat |
31957133 |
T |
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| Q |
217 |
taatatatattttagatggagtatattttatgcttacgtgattaatccttttcgtgtgcaatatttggtatgttcatctcactc |
300 |
Q |
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| T |
31957134 |
gaatatatattttagatggagtatattttatgctcacgtgattaatccttttcttgtgcaatatttggtatgttcatgtcactc |
31957217 |
T |
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