View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14190_low_1 (Length: 219)

Name: NF14190_low_1
Description: NF14190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14190_low_1
NF14190_low_1
[»] chr7 (19 HSPs)
chr7 (19-201)||(21704703-21704885)
chr7 (19-201)||(21764122-21764304)
chr7 (19-201)||(21628185-21628367)
chr7 (19-201)||(21714243-21714425)
chr7 (3-201)||(21646787-21646985)
chr7 (19-201)||(21623253-21623435)
chr7 (36-201)||(21788306-21788471)
chr7 (6-201)||(21681697-21681892)
chr7 (19-201)||(21808071-21808253)
chr7 (19-201)||(21725956-21726138)
chr7 (23-201)||(15713687-15713865)
chr7 (19-201)||(21745592-21745774)
chr7 (19-187)||(21664158-21664326)
chr7 (19-201)||(21772021-21772203)
chr7 (19-201)||(21785466-21785648)
chr7 (20-201)||(21652130-21652311)
chr7 (19-201)||(21992233-21992424)
chr7 (29-111)||(21792081-21792163)
chr7 (32-201)||(21689486-21689655)
[»] scaffold0182 (2 HSPs)
scaffold0182 (19-120)||(25370-25471)
scaffold0182 (133-201)||(25547-25615)
[»] chr1 (1 HSPs)
chr1 (158-201)||(18192139-18192182)


Alignment Details
Target: chr7 (Bit Score: 107; Significance: 8e-54; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21704703 - 21704885
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    ||||||||| || || |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  21704703 acccaagttagtgtcgataggtcctatccatcatgacaatccaactctgaagttaggagagaagtacaagcttatgtgggcagcaaaatacatagaaaac 21704802  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |||  ||  | || |||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||||||    
T  21704803 accggacttattccagaggaactacacaaaaagattgcagataacattgatgaactgaagggtcgttttagcgatgatgtttt 21704885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21764122 - 21764304
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    |||||||||| | ||||||||||||||||||||| |||   || ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  21764122 acccaagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaac 21764221  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |||  ||  |||| |||||||||| || ||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||    
T  21764222 accgcacttaatccagaggaactacaccaaaagattgctgataacatcgatgaactgaagggtcgttttagcgatgatgtttt 21764304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21628185 - 21628367
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    ||||||||| || |||||||||||||||||||||  || | ||||||||||  |||||||||||||||||||| | |||||| || ||||||||||||||    
T  21628185 acccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctgaacataggagagaagtacaagcttgtgtgggcatcaaaatacatagaaaac 21628284  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |    ||  | || |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  21628285 attggacttattccagaggaactacacaaaaagattgctgataacattgatgaactgaagggtcgttttagcgacgatgtttt 21628367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21714243 - 21714425
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    ||||||||| || ||| ||||||||||||||||| ||||| |||||||||||  ||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  21714243 acccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctgaagaaaggagagaagtacaaacttatgtgggcagcaaaatacatagaaaac 21714342  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |||| ||| | || |||||| ||| ||||||||||||  ||||||||| ||||||||||||||| ||||  | ||||||||||    
T  21714343 accagacacattccagaggatctacacaaaaagattgcagataacattgatgaactgaagggtcattttgacaacgatgtttt 21714425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 201
Target Start/End: Original strand, 21646787 - 21646985
Alignment:
Q  3 ttgaggagcagcacagacccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagc 102  Q
    ||||||||||  |||  ||||||||||| ||||||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| ||||||||    
T  21646787 ttgaggagcattacacccccaagttggtgtcaataggtcctatccatcatgacaatccaaagctgaagataggagagaaatacaagcttatgtgggcagc 21646886  T
Q  103 agaatacatagaaaacaccaaacagaatcaag-aggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    | |||||||  |||||||   | ||||| ||| |||| ||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||    
T  21646887 aaaatacatcaaaaacacggga-agaattaagaaggatctacacaaaaagattgtagataacattgatgaactgaagggtcattttagcgacgacgtttt 21646985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21623253 - 21623435
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    |||||||||||| |||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||||    
T  21623253 acccaagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcaaaaac 21623352  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |||| | |   |||  ||||  |  |||| ||||||| |||||| ||| ||||||||||||||| |||||| |||||||||||    
T  21623353 accagaaaagttcagaaggatatgcacaacaagattgctgataatattgatgaactgaagggtcattttagtgacgatgtttt 21623435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 36 - 201
Target Start/End: Original strand, 21788306 - 21788471
Alignment:
Q  36 taggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaacaccaaacagaatcaaga 135  Q
    ||||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||   ||| | || |||    
T  21788306 taggtcctatccatcatgacaacacaaatttgaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcgaaaacactggacacattccaga 21788405  T
Q  136 ggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    ||| ||  ||||||||||||  ||||||||| ||||||||||||||| |||| |||||||||||||    
T  21788406 ggatctgcacaaaaagattgcagataacattgatgaactgaagggtcattttggcgacgatgtttt 21788471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 21681697 - 21681892
Alignment:
Q  6 aggagcagcacagacccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcaga 105  Q
    |||||||  |||| |||||||| || |||||||||||||||||||||  |||| || |||| |||||||||||||||||||||||||| ||||||||| |    
T  21681697 aggagcattacagccccaagtttgtgtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagcttatgtgggcagcaaa 21681796  T
Q  106 atacatagaaaacaccaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    ||||||  |||||||   |   | |||| |||| ||||||||||| |||| |||||||||| ||||| ||||||| | ||||||||||||||||||    
T  21681797 atacatcaaaaacactggaagcattcaaaaggatctatacaaaaaaattgctgataacattgatgaattgaagggccattttagcgacgatgtttt 21681892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 21808253 - 21808071
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    ||||||||||||||||||||||||||||||||||   |||  ||||||||||||||||||||||||||||||||| ||| | ||  ||||||||||||||    
T  21808253 acccaagttggtatcaataggtcctatccatcatggaaatataaatctgaagttaggagagaagtacaagcttatgtggtctgcgaaatacatagaaaac 21808154  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    | |      | || |||||| ||| |||||||||||| |||||||||  ||||||||||||||| |||| |||||||||||||    
T  21808153 agcggctttattctagaggatctacacaaaaagattgctgataacatcgatgaactgaagggtcattttggcgacgatgtttt 21808071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21725956 - 21726138
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    ||||||||  || |||||||||||||| |||||| | ||  |||||||||  |||| |||| ||||||| ||||| ||||||||| ||||||||||||||    
T  21725956 acccaagtgtgtgtcaataggtcctattcatcatcagaacacaaatctgatattagcagagtagtacaaacttatgtgggcagcaaaatacatagaaaac 21726055  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |||  ||| | || |||||| ||| |||||||||||| |||||||||| ||||||||||||||| ||||  ||||||||||||    
T  21726056 accggacacattccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtcattttgacgacgatgtttt 21726138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 15713687 - 15713865
Alignment:
Q  23 aagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaacacca 122  Q
    |||||||| |||||||| |||||||||||| ||||| ||||||| |||| ||| ||||||||||||||||| ||||| ||| |||||||  |||||||      
T  15713687 aagttggtttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaagtacaagcttatgtgggcggcaaaatacatcaaaaacactg 15713786  T
Q  123 aacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
     |   | || |||||||||  |||||||||||| |||||||||| ||||||||||| ||| |||||| |||||||||||    
T  15713787 gaagcattctagaggaactgcacaaaaagattgctgataacattgatgaactgaagtgtcattttagtgacgatgtttt 15713865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21745592 - 21745774
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    |||||||||||| ||| ||||||||||||||||| ||||| ||||||| |||  ||||||  |||| |||||||| ||||||||| ||||| | || ||     
T  21745592 acccaagttggtgtcattaggtcctatccatcatgacaatccaaatctaaagacaggagaagagtataagcttatgtgggcagcaaaatacctcgagaat 21745691  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    ||    || |||| | | || ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21745692 acaggccacaatccacacgatctgcacaaaaagattgttgataacattgatgaactgaagggtcgttttagcgacgatgtttt 21745774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 21664158 - 21664326
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    |||||||||  | |||||||||||||||||||||  |||| || ||||||||||||||| ||||||||||||||| ||||||||| ||||||| |||||     
T  21664158 acccaagttcctgtcaataggtcctatccatcatggcaatacagatctgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaat 21664257  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgtttt 187  Q
    || | ||  |||| |  ||| ||| ||||||||||| ||||||||||  ||||||||||||||| ||||    
T  21664258 acaagactcaatccacgggatctacacaaaaagatttttgataacatcgatgaactgaagggtcatttt 21664326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21772021 - 21772203
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    ||||||||  || |||||||||||||| |||||| | ||  |||||||||  |||| |||||||||||| ||||| ||||||||| |||||||||||||     
T  21772021 acccaagtgtgtgtcaataggtcctattcatcatcataacacaaatctgatattagcagagaagtacaaacttatgtgggcagcaaaatacatagaaaat 21772120  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    | |  | | | || |||||| ||| |||||||||||| |||||||||| ||||||||||||||| ||||  ||| ||||||||    
T  21772121 aacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtcattttgacgatgatgtttt 21772203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21785466 - 21785648
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    ||||||||| || ||||||||||||||||||||| ||||| |||||||||||  ||||||||||||||||||||| ||||| ||| ||||| | || ||     
T  21785466 acccaagttagtgtcaataggtcctatccatcatgacaatccaaatctgaagacaggagagaagtacaagcttatgtgggccgcaaaatacctcgagaat 21785565  T
Q  119 accaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |     |  |||| |   || ||| ||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||    
T  21785566 ataggccgcaatccacgcgatctacacaaaaagattgccgataacattaatgaactgaagggtcattttagcgatgatgtttt 21785648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 21652130 - 21652311
Alignment:
Q  20 cccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaaca 119  Q
    |||||||| || ||||||||||||||||||||| ||||| ||||| ||||   ||||||| |||| |||||||| ||||||||| |||||||||||||||    
T  21652130 cccaagtttgtttcaataggtcctatccatcatgacaatacaaatatgaaaccaggagaggagtataagcttatgtgggcagcaaaatacatagaaaaca 21652229  T
Q  120 ccaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
     |      | || |||||| | | ||||||||||||  ||||| ||||| ||||| ||||||| ||||||||||||||||||    
T  21652230 acggctttattctagaggatcgacacaaaaagattgccgataaaattaacgaactaaagggtcattttagcgacgatgtttt 21652311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 21992233 - 21992424
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcat---------aacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatac 109  Q
    |||||| ||||| |||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  21992233 acccaaattggtgtcaataggtcctatccatcatggcaatacaagcaatgcaaatctgaagttaggagagaagtacaagcttacgtgggcagcaaaatac 21992332  T
Q  110 atagaaaacaccaaacagaatcaagaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    || |||||  |   ||  |||| |   || ||| ||||||||||| | ||||||||| ||||||||||||||| |||||| |||||||||||    
T  21992333 atcgaaaatgcaggacttaatccatgcgatctacacaaaaagattatcgataacattgatgaactgaagggtcattttagtgacgatgtttt 21992424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 21792081 - 21792163
Alignment:
Q  29 gtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacat 111  Q
    |||||||||||||| |||||||||  || | || ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  21792081 gtatcaataggtcccatccatcatggcagtacagatctggagttaggagagaagtacaagcttatgtgggcagcagaatacat 21792163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 201
Target Start/End: Original strand, 21689486 - 21689655
Alignment:
Q  32 tcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaacaccaaacagaatc 131  Q
    |||| ||||||||||||||||  ||||  |  ||| |||||||||||||||||||||||||| ||||||||| |||||||  |||||||   | || ||     
T  21689486 tcaaaaggtcctatccatcatggcaataaatctctaaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcaaaaacactgga-agcatt 21689584  T
Q  132 aaga-ggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
     ||| ||| ||| ||||||| ||||||||||||||| || |||||||||||| ||||   |||||||||||    
T  21689585 cagagggatctacacaaaaacattgttgataacattgataaactgaagggtcattttgatgacgatgtttt 21689655  T

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Target: scaffold0182 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 25370 - 25471
Alignment:
Q  19 acccaagttggtatcaataggtcctatccatcataacaatgcaaatctgaagttaggagagaagtacaagcttatatgggcagcagaatacatagaaaac 118  Q
    |||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  25370 acccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaagttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaac 25469  T
Q  119 ac 120  Q
    ||    
T  25470 ac 25471  T

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Target: scaffold0182; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 25547 - 25615
Alignment:
Q  133 agaggaactatacaaaaagattgttgataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    |||| |||||||||||||||||| |||  |||| ||| |  ||||||||| ||||||||| ||||||||    
T  25547 agagaaactatacaaaaagattgatgaagacatcaataatttgaagggtcattttagcgaggatgtttt 25615  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 18192182 - 18192139
Alignment:
Q  158 gataacattaatgaactgaagggtcgttttagcgacgatgtttt 201  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||    
T  18192182 gataacattaatgaactgaagggtctttttgccgacgatgtttt 18192139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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