View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14191_high_19 (Length: 271)
Name: NF14191_high_19
Description: NF14191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14191_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 395674 - 395935
Alignment:
| Q |
1 |
attaatttaaaacgctatgtttggcgcttcttcaattttgttccctctatccacacaagcatctccttacatttttccaaacttaacaacttccacttac |
100 |
Q |
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| T |
395674 |
attaatttaaaacgctatgtttggcgcttcttcaattttgttccctctatccacacaagcatctccttacatttttccaaacttaacaacttccacttac |
395773 |
T |
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| Q |
101 |
caagagtgttttaagttgaagcagaatctggtaaaagttaaaaagaagaatcgattaattgtgtta------agcagcagcagcgatacgagttatgaag |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
395774 |
caagagtgttttaagttgaagcagaatctggtaaaagttaaaaagaagaatcgattaattgtgttaagcagcagcagcagcagcgatacgagttatgaag |
395873 |
T |
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| Q |
195 |
ttggtggtggatttccacttaacgaacttcttaaccgaaatgaaaactcagaggaggatact |
256 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
395874 |
ttggtggtggatttccacttaacgaacttcttaaccgaaataaaaactcagaggaggatact |
395935 |
T |
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