View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14191_high_29 (Length: 235)
Name: NF14191_high_29
Description: NF14191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14191_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 21399086 - 21398990
Alignment:
| Q |
124 |
ggttgttgatactgctttgtattaacacaagccaccccggcgacatttaataacaccagcacctgcagttaaagtaccaactaaagaagatggtttg |
220 |
Q |
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| T |
21399086 |
ggttgttgatactgctttgtattaacacatgccaccccggcgacatttaataacaccagcacctgcagttaaagtaccaactaaagaagatggtttg |
21398990 |
T |
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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21399209 - 21399172
Alignment:
| Q |
1 |
ctataacaatgcaataataagaggaaaaagaatgaaaa |
38 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
21399209 |
ctataacaatgcaataataagaggaaaaagaatgaaaa |
21399172 |
T |
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