View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14191_low_35 (Length: 216)
Name: NF14191_low_35
Description: NF14191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14191_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21399736 - 21399531
Alignment:
| Q |
1 |
aatttgatatcatcttatccacaaattaaatggaaaagcataatttgcataaaatgnnnnnnnggaaaagcataaacaaggaacgagtataagatgatac |
100 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
21399736 |
aatttgatatcatattatccacaaattaaatggaaaagcataatttgcataaaat-aaaaaaaggaaaagcataaacaaggaacgagtataagatgatac |
21399638 |
T |
|
| Q |
101 |
attctgatttgaa-----actatttgatcaatacattcctattgcccatttcatttgggacagatcaagtgttttctaaataaatggcacacatacacaa |
195 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
21399637 |
attctgatttgaacaccaactatttgatcaatacattcctattgcccatttcatttgggacagatcaagtgttttctaaataaatggcacacatacacaa |
21399538 |
T |
|
| Q |
196 |
tcgagag |
202 |
Q |
| |
|
||||||| |
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|
| T |
21399537 |
tcgagag |
21399531 |
T |
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