View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14191_low_7 (Length: 431)
Name: NF14191_low_7
Description: NF14191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14191_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 18 - 409
Target Start/End: Original strand, 37138128 - 37138506
Alignment:
| Q |
18 |
cccaccaatcaagaatttgcttggactcttggatcaaattggaacaacatgcctggcatatgttaatttgagctcaaagacnnnnnnnnnngttttgttt |
117 |
Q |
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| T |
37138128 |
cccaccaatcaagaatttgcttggactcttggatcaaattggaacaacatgccaggcatatgttaatttgagctcaaag-------------ttgtgttt |
37138214 |
T |
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| Q |
118 |
tgtaatgattacaaaacgaatattcctagtgaagtagatggtagaaccatatgatgtaatagttagaatatttaatggtagagattagtaatgctcatat |
217 |
Q |
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| T |
37138215 |
tgtaatgattacaaaacgaatattcgtagtgaagtagatggtagaaccatatgatgtaatagttagaatatttaatggtagagattagtaatgctcatat |
37138314 |
T |
|
| Q |
218 |
gggttggataatataatgacattaaatttttatccgtagtcaatttatgttatttagaatatgttagagattggtgtgaaagtttggatttttggataca |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37138315 |
gggttggataatataatgacattaaatttttatccgtagtcaatttatgttatttagaatatgttagagattggtgtgaaagtttggatttttggataca |
37138414 |
T |
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| Q |
318 |
agtgtgctttatttttagtttcatgtgttcttatgtttcgaaacatattaaatcaagtttgctgatttctacttgtttagcatcttataatg |
409 |
Q |
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| T |
37138415 |
agtgtgctttatttttagtctcatgtgttcttatgtttcgaaacatattaaatcaagtttgcttatttctacttgtttagcatcgtataatg |
37138506 |
T |
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