View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14192_low_4 (Length: 276)

Name: NF14192_low_4
Description: NF14192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14192_low_4
NF14192_low_4
[»] chr8 (17 HSPs)
chr8 (60-240)||(2617696-2617876)
chr8 (76-190)||(41260693-41260806)
chr8 (89-188)||(18050036-18050134)
chr8 (76-190)||(15255854-15255967)
chr8 (117-190)||(599533-599606)
chr8 (76-201)||(34799515-34799639)
chr8 (92-184)||(28876910-28877002)
chr8 (76-190)||(5730818-5730931)
chr8 (76-190)||(16578109-16578222)
chr8 (144-192)||(28254925-28254973)
chr8 (83-190)||(599937-600043)
chr8 (91-190)||(34799080-34799178)
chr8 (83-190)||(41260272-41260378)
chr8 (67-201)||(9930078-9930212)
chr8 (76-190)||(16578528-16578641)
chr8 (91-188)||(18428209-18428305)
chr8 (76-188)||(28877321-28877432)
[»] chr4 (34 HSPs)
chr4 (67-192)||(23986519-23986644)
chr4 (83-188)||(40160529-40160633)
chr4 (76-190)||(28465513-28465626)
chr4 (67-153)||(31297111-31297197)
chr4 (76-190)||(56077756-56077869)
chr4 (92-188)||(229606-229702)
chr4 (76-188)||(14439831-14439942)
chr4 (91-195)||(51309951-51310055)
chr4 (93-196)||(37336596-37336699)
chr4 (76-190)||(34789383-34789496)
chr4 (83-188)||(33777635-33777739)
chr4 (88-189)||(51641273-51641374)
chr4 (76-189)||(54441001-54441113)
chr4 (83-190)||(12593025-12593131)
chr4 (144-203)||(19528857-19528916)
chr4 (83-190)||(46737094-46737200)
chr4 (76-190)||(12593455-12593568)
chr4 (76-190)||(40160095-40160208)
chr4 (117-190)||(21034709-21034782)
chr4 (117-190)||(24335762-24335835)
chr4 (92-188)||(229164-229260)
chr4 (91-190)||(21034236-21034334)
chr4 (92-203)||(33689817-33689927)
chr4 (77-188)||(51640963-51641074)
chr4 (76-189)||(54440573-54440683)
chr4 (91-189)||(24851913-24852010)
chr4 (83-189)||(28465083-28465188)
chr4 (91-189)||(34789830-34789927)
chr4 (91-188)||(26974692-26974788)
chr4 (117-190)||(34807117-34807190)
chr4 (92-132)||(18965199-18965239)
chr4 (76-188)||(28166007-28166118)
chr4 (90-190)||(35193748-35193847)
chr4 (145-189)||(35644062-35644106)
[»] chr7 (25 HSPs)
chr7 (76-204)||(7732919-7733046)
chr7 (66-177)||(5445144-5445255)
chr7 (66-177)||(5454188-5454299)
chr7 (76-190)||(7732489-7732602)
chr7 (76-193)||(28687931-28688046)
chr7 (91-190)||(9181859-9181957)
chr7 (76-188)||(25637630-25637741)
chr7 (94-190)||(39136687-39136783)
chr7 (83-190)||(16917714-16917820)
chr7 (76-190)||(16081731-16081844)
chr7 (144-190)||(24929807-24929853)
chr7 (76-189)||(9181534-9181646)
chr7 (91-188)||(26026320-26026416)
chr7 (83-188)||(35578902-35579006)
chr7 (83-191)||(35579324-35579431)
chr7 (144-192)||(39388767-39388815)
chr7 (74-197)||(49064028-49064150)
chr7 (76-190)||(15712366-15712479)
chr7 (144-190)||(27245204-27245250)
chr7 (91-196)||(786777-786881)
chr7 (83-188)||(5745642-5745746)
chr7 (117-190)||(5746113-5746185)
chr7 (76-189)||(9393738-9393850)
chr7 (144-188)||(5184431-5184475)
chr7 (156-188)||(11973913-11973945)
[»] chr5 (20 HSPs)
chr5 (76-192)||(10721785-10721900)
chr5 (83-190)||(16752583-16752689)
chr5 (76-190)||(28494845-28494958)
chr5 (73-133)||(12220631-12220691)
chr5 (144-192)||(32697725-32697773)
chr5 (76-167)||(13557016-13557106)
chr5 (88-135)||(25974148-25974195)
chr5 (76-190)||(28289685-28289798)
chr5 (76-190)||(28290076-28290189)
chr5 (76-188)||(20266346-20266458)
chr5 (94-190)||(22651760-22651856)
chr5 (83-190)||(15029748-15029854)
chr5 (146-189)||(16753071-16753114)
chr5 (78-153)||(25973876-25973951)
chr5 (91-190)||(41834506-41834604)
chr5 (76-190)||(18149734-18149847)
chr5 (76-204)||(8419053-8419179)
chr5 (144-188)||(14340909-14340953)
chr5 (76-132)||(17260385-17260441)
chr5 (83-199)||(27307053-27307168)
[»] chr3 (25 HSPs)
chr3 (83-189)||(36701534-36701640)
chr3 (76-188)||(44676904-44677015)
chr3 (91-190)||(36701107-36701206)
chr3 (76-188)||(2323382-2323493)
chr3 (76-188)||(49951549-49951660)
chr3 (117-188)||(27199705-27199776)
chr3 (83-190)||(43222391-43222497)
chr3 (83-190)||(49951985-49952091)
chr3 (76-190)||(50662844-50662957)
chr3 (76-190)||(51827958-51828071)
chr3 (73-167)||(40490697-40490793)
chr3 (91-190)||(16701239-16701337)
chr3 (83-190)||(27200130-27200236)
chr3 (91-190)||(37076121-37076219)
chr3 (83-190)||(39010076-39010182)
chr3 (83-190)||(43678296-43678402)
chr3 (83-190)||(49720800-49720906)
chr3 (144-201)||(14654688-14654745)
chr3 (117-190)||(49407797-49407870)
chr3 (76-187)||(329850-329960)
chr3 (83-190)||(46013423-46013529)
chr3 (88-190)||(38535310-38535411)
chr3 (88-190)||(44676473-44676574)
chr3 (76-188)||(16689361-16689472)
chr3 (121-189)||(30513724-30513792)
[»] chr1 (30 HSPs)
chr1 (77-141)||(50419440-50419504)
chr1 (83-190)||(44802609-44802716)
chr1 (70-189)||(50926232-50926352)
chr1 (83-190)||(1837506-1837612)
chr1 (83-189)||(2867913-2868018)
chr1 (76-190)||(16298683-16298796)
chr1 (67-133)||(52233796-52233862)
chr1 (77-190)||(39843457-39843569)
chr1 (77-190)||(50926674-50926786)
chr1 (73-190)||(52235096-52235213)
chr1 (76-188)||(45048567-45048678)
chr1 (91-204)||(4080008-4080120)
chr1 (144-205)||(29438916-29438977)
chr1 (67-135)||(39843209-39843277)
chr1 (76-200)||(44954658-44954781)
chr1 (83-190)||(50419698-50419805)
chr1 (91-189)||(10278550-10278647)
chr1 (76-198)||(21938556-21938677)
chr1 (117-190)||(23340184-23340257)
chr1 (91-188)||(37421163-37421259)
chr1 (76-188)||(39485068-39485179)
chr1 (76-163)||(9833583-9833670)
chr1 (91-190)||(17088147-17088245)
chr1 (76-190)||(443983-444096)
chr1 (88-190)||(9992599-9992700)
chr1 (117-187)||(25274760-25274830)
chr1 (83-141)||(29020930-29020988)
chr1 (91-189)||(44291303-44291401)
chr1 (117-190)||(29021337-29021410)
chr1 (76-136)||(9992210-9992269)
[»] chr2 (28 HSPs)
chr2 (76-194)||(33920609-33920726)
chr2 (67-188)||(3822924-3823045)
chr2 (67-188)||(3824130-3824251)
chr2 (91-190)||(14942292-14942391)
chr2 (76-178)||(2190506-2190609)
chr2 (76-199)||(31797209-31797331)
chr2 (76-199)||(38008383-38008505)
chr2 (76-190)||(4355756-4355869)
chr2 (76-190)||(20128169-20128282)
chr2 (92-190)||(28143476-28143574)
chr2 (91-200)||(20127727-20127835)
chr2 (203-259)||(34465745-34465800)
chr2 (83-190)||(4356195-4356301)
chr2 (76-190)||(62958-63071)
chr2 (117-198)||(9330267-9330348)
chr2 (76-188)||(43160012-43160124)
chr2 (76-188)||(4808882-4808993)
chr2 (83-199)||(5560043-5560158)
chr2 (144-208)||(32418142-32418206)
chr2 (76-199)||(4809311-4809433)
chr2 (91-190)||(38007951-38008049)
chr2 (144-190)||(6949943-6949989)
chr2 (144-190)||(25336099-25336145)
chr2 (76-190)||(44219645-44219758)
chr2 (83-188)||(20495196-20495301)
chr2 (146-199)||(42192744-42192797)
chr2 (91-195)||(11539633-11539736)
chr2 (91-187)||(16175797-16175892)
[»] chr6 (11 HSPs)
chr6 (83-200)||(31574164-31574280)
chr6 (76-190)||(5120901-5121014)
chr6 (76-190)||(31073574-31073687)
chr6 (76-190)||(32836428-32836541)
chr6 (76-201)||(5114458-5114582)
chr6 (76-188)||(35163187-35163298)
chr6 (144-190)||(28636293-28636339)
chr6 (76-190)||(33096038-33096156)
chr6 (92-188)||(25468852-25468947)
chr6 (144-191)||(30250721-30250768)
chr6 (76-132)||(33095773-33095829)
[»] scaffold0057 (1 HSPs)
scaffold0057 (73-133)||(61086-61146)
[»] scaffold0108 (2 HSPs)
scaffold0108 (117-195)||(15109-15187)
scaffold0108 (92-190)||(15545-15643)
[»] scaffold1432 (1 HSPs)
scaffold1432 (77-190)||(498-610)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 6e-86; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 2617876 - 2617696
Alignment:
Q  60 gttattgaatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggt 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  2617876 gttattgaatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcaatttgaaaaagacatgattaatttcgtgaaccggt 2617777  T
Q  160 caaaatgcaatgaccaaaaatgtaattaagcatttattttattatattgcaaatcccttattgagttgggagatctattgt 240  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2617776 caaaatgcaaggacaaaaaatgtaattaaacatttattttattatattgcaaatcccttattgagttgggagatctattgt 2617696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 41260693 - 41260806
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  ||||| ||||||||||  || |||||||||||||||||    
T  41260693 taggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgacca 41260791  T
Q  176 aaaatgtaattaagc 190  Q
    ||| | |||||||||    
T  41260792 aaagtataattaagc 41260806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 18050036 - 18050134
Alignment:
Q  89 gcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    ||||||||||| ||||| || |||| | |||||||||||| ||| ||  ||||  ||||||||||  |||||||||||||| ||||||||||||||||||    
T  18050036 gcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 15255967 - 15255854
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||||| |||||    
T  15255967 taggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggacca 15255869  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  15255868 aaagtgtaattaagc 15255854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 599606 - 599533
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||| ||| ||  ||||  ||||||||||  |||||||||||||| ||||||||||||||||||||    
T  599606 tttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagc 599533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 34799515 - 34799639
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  |||||||| || ||||||||||| || |||||    
T  34799515 taggactaaaactgcaaaaaacat-atagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggacca 34799613  T
Q  176 aaaatgtaattaagcatttattttat 201  Q
    ||| ||||||||||| | ||||||||    
T  34799614 aaagtgtaattaagcctatattttat 34799639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 28877002 - 28876910
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaa 184  Q
    |||||||||||||| || |||| | |||||||||||||||| || ||  |||| |||||||| ||| ||||||||| | |||||||| |||||    
T  28877002 aaaaacatgatagtttagggacgattttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaa 28876910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 5730931 - 5730818
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||  ||||||||||| ||||| ||||||| | |||||| ||||| ||||||| | || || ||||||||  |||||||||||  | |||||    
T  5730931 taggactaaaacagcaaaaaacat-atagtttaaggacgattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggacca 5730833  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  5730832 aaagtgtaattaagc 5730818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 16578222 - 16578109
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||| | || |||| | |||||||||||| ||| ||  | ||  ||||||||||  ||||||||||||||  ||||    
T  16578222 taggaccaaaactgcaaaaaacat-ataatttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaagaacca 16578124  T
Q  176 aaaatgtaattaagc 190  Q
    |||||||||||||||    
T  16578123 aaaatgtaattaagc 16578109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 28254925 - 28254973
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcat 192  Q
    ||||||||||  |||||||||||||| |||||||| |||||||||||||    
T  28254925 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcat 28254973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 599937 - 600043
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||| | ||||||| |||| ||||||| ||||  | |||||| |  |||||||||||  | |||||||| |||    
T  599937 aaaactgcaaaaaacat-atagtttaaggacgattttgttccatttaaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgt 600035  T
Q  183 aattaagc 190  Q
    ||||||||    
T  600036 aattaagc 600043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 34799178 - 34799080
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| ||||||| |||||||||||||| ||||| | | ||  | |||| |||  |||||||||||  |||||||||| |||||||||||    
T  34799178 aaaaaacat-atagtttaaggacgactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaagc 34799080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 41260378 - 41260272
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | |||| |||  |||||||||||  | |||||||| |||    
T  41260378 aaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgt 41260280  T
Q  183 aattaagc 190  Q
    ||||||||    
T  41260279 aattaagc 41260272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 201
Target Start/End: Original strand, 9930078 - 9930212
Alignment:
Q  67 aatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatg 166  Q
    ||||| || ||||||||||| ||||| ||| ||||||||  |||||| | ||||||| |||| |||| | || ||  | ||||||||   || ||||||     
T  9930078 aatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaata 9930177  T
Q  167 caatgaccaaaaatgtaattaagcatttattttat 201  Q
    | | |||||||| ||||||||||| ||||||||||    
T  9930178 cgaggaccaaaagtgtaattaagcctttattttat 9930212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 16578528 - 16578641
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||| ||  | |||||||||||||||||||| || |  | ||||||||  | |||||||||  | |||||    
T  16578528 taggactaaaactgcaaaaaacat-atagtttaatgatgattttgttcgatttgaaaaagatataaccattttcgtgagttcgtcaaaatggtaggacca 16578626  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  16578627 aaagtgtaattaagc 16578641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 18428209 - 18428305
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    ||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||||| |||||||||    
T  18428209 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 28877321 - 28877432
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||  ||||||||||||||||| || |||| | ||||||| |||||||| ||  || |  | ||||||||  |||||||||||| | |||||    
T  28877321 taggactaaaacagcaaaaaacatgatagt-tagggacaattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggacca 28877419  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  28877420 aaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 23986644 - 23986519
Alignment:
Q  67 aatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatg 166  Q
    ||||| ||||||||| |||| |||||||||||||||||| || ||||   |||||||||||||||| ||||||||  | |||||||| ||||||||||||    
T  23986644 aatgggggttaggactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatg 23986545  T
Q  167 caatgaccaaaaatgtaattaagcat 192  Q
      | |||||||| || ||||||||||    
T  23986544 tgaggaccaaaagtgaaattaagcat 23986519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 40160529 - 40160633
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||||||||| || ||||   ||||||| |||||||| || ||||| || ||||||||  |||||||||||||| ||||||||||||    
T  40160529 aaaactgcaaaaaacatgatagttta-ggacggttttgttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgt 40160627  T
Q  183 aattaa 188  Q
    ||||||    
T  40160628 aattaa 40160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 28465513 - 28465626
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  28465513 taggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 28465611  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  28465612 aaagtgtaattaagc 28465626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 31297111 - 31297197
Alignment:
Q  67 aatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtga 153  Q
    ||||||||||| || ||||||||||||||||| ||||| ||| || | |||||||||||||| |||||| |||||  ||||||||||    
T  31297111 aatggaggttatgatgaaaattgcaaaaaacaagatagcataggggcaactttgttcgatttaaaaaaggcatgaccaatttcgtga 31297197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 56077756 - 56077869
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  56077756 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggacca 56077854  T
Q  176 aaaatgtaattaagc 190  Q
    |||||||||||||||    
T  56077855 aaaatgtaattaagc 56077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 229606 - 229702
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    |||||||||||||| ||||||| | |||||| ||||||||| || || ||  | |||||||| ||||||||||||| | |||||||| |||||||||    
T  229606 aaaaacatgatagtttaaggacgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 14439942 - 14439831
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | ||||||  |||| ||||||  ||||  ||||||||||  |||||||||||||| |||||    
T  14439942 taggactaaaactgcaaaaaacat-atagtttagggacgattttgtttaatttaaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggacca 14439844  T
Q  176 aaaatgtaattaa 188  Q
    |||||||||||||    
T  14439843 aaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 51309951 - 51310055
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||||||| || |||||  |||||||||||||||| || |||||  | |||||||| ||||| ||||||| | |||||||| || ||||||||    
T  51309951 aaaaaacatgatagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaagc 51310050  T
Q  191 attta 195  Q
     ||||    
T  51310051 cttta 51310055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 37336596 - 37336699
Alignment:
Q  93 aaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcat 192  Q
    |||| ||| ||||||| |||| |||||||||||||||||||||| || |   |||||||||  |||| ||||||| | ||||||||||  ||||||||||    
T  37336596 aaaaaatggtagtatatggacaactttgttcgatttgaaaaagagataacctatttcgtgagttggttaaaatgcgaggaccaaaaatacaattaagcat 37336695  T
Q  193 ttat 196  Q
    ||||    
T  37336696 ttat 37336699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 34789496 - 34789383
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  34789496 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 34789398  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  34789397 aaagtgtaattaagc 34789383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 33777739 - 33777635
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    ||||||||||||||||| ||||| ||||||| | |||||||||||| ||||| | ||||| | ||||||||  |||||||||||  | || ||||| |||    
T  33777739 aaaattgcaaaaaacat-atagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgt 33777641  T
Q  183 aattaa 188  Q
    ||||||    
T  33777640 aattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 51641273 - 51641374
Alignment:
Q  88 tgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaatta 187  Q
    |||||||||||||| |||||| ||| | ||||||| ||||| |||||| || ||| ||||||||||  | ||| |||||||| ||| |||| ||||||||    
T  51641273 tgcaaaaaacatgacagtatagggattgctttgtttgatttaaaaaaggcaggatcaatttcgtgagtttgtctaaatgcaaggactaaaagtgtaatta 51641372  T
Q  188 ag 189  Q
    ||    
T  51641373 ag 51641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 54441001 - 54441113
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | |||||||| ||| ||||||||  | |||||    
T  54441001 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagctgatcaaaatggtaggacca 54441099  T
Q  176 aaaatgtaattaag 189  Q
    ||| ||||||||||    
T  54441100 aaagtgtaattaag 54441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 12593131 - 12593025
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    ||||||||||||||||| ||||| ||||||| | |||||||||||| ||||||  ||||  | ||||||||  |||||||| ||  | |||||||| |||    
T  12593131 aaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgt 12593033  T
Q  183 aattaagc 190  Q
    ||||||||    
T  12593032 aattaagc 12593025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 19528916 - 19528857
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcatttattttatta 203  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||| | | ||||||||    
T  19528916 aatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagcctattttttatta 19528857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 46737094 - 46737200
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||||| |||||||| |||    
T  46737094 aaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgt 46737192  T
Q  183 aattaagc 190  Q
    ||||||||    
T  46737193 aattaagc 46737200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 12593455 - 12593568
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| ||||||||| || ||||| ||  ||| | |||||||||||| ||| ||  ||||  ||||||||||  |||||||||||||| |||||    
T  12593455 taggactaaaactgcaaaaaatat-atagtttacagacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggacca 12593553  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  12593554 aaagtgtaattaagc 12593568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 40160208 - 40160095
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || ||||   |||||||||||| ||| || ||||| || |||||||| ||||| |||||||   || ||    
T  40160208 taggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatca 40160110  T
Q  176 aaaatgtaattaagc 190  Q
    |||||||||||||||    
T  40160109 aaaatgtaattaagc 40160095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 21034709 - 21034782
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||| ||| ||| | ||  ||||||||||  |||||||||||||| |||||||| |||||||||||    
T  21034709 tttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagc 21034782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 24335835 - 24335762
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||||||| || |||||  | |||||||| ||||||||||||||| || | ||| |||||||||||    
T  24335835 tttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaagc 24335762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 229260 - 229164
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    |||||||||||||| ||||||| | ||||||| |||||||| || || ||  | ||||| || ||||||||||| | | |||||||| |||||||||    
T  229260 aaaaacatgatagtttaaggacgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 21034334 - 21034236
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||||| |||||||||||    
T  21034334 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 21034236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 33689927 - 33689817
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagca 191  Q
    |||||||| ||||| ||||||| | |||||||||||| ||| ||  | ||  ||||| ||||  |||||||||||||| |||||||| |||||||||||     
T  33689927 aaaaacat-atagtttaaggacgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 33689829  T
Q  192 tttattttatta 203  Q
    |  |||||||||    
T  33689828 taaattttatta 33689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 51641074 - 51640963
Alignment:
Q  77 aggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaa 176  Q
    ||||| |||| |||||||||||||||||||||   ||  ||||||||||||| |||||| || ||  ||||| ||||  ||||| ||| || |  |||||    
T  51641074 aggaccaaaagtgcaaaaaacatgatagtatataaaccgctttgttcgatttaaaaaaggcaggaccaattttgtgagttggtctaaaagcgaaaaccaa 51640975  T
Q  177 aaatgtaattaa 188  Q
    ||||||||||||    
T  51640974 aaatgtaattaa 51640963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 54440683 - 54440573
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| ||||||||||||   ||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||||| |||||    
T  54440683 taggactaaaactgcaaaaaacat---agtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggacca 54440587  T
Q  176 aaaatgtaattaag 189  Q
    ||| ||||||||||    
T  54440586 aaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 24851913 - 24852010
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||| ||||||||||  |||||||||||||| |||||||| | ||||||||    
T  24851913 aaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaag 24852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 28465188 - 28465083
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||| | |||||||||||| ||| ||  | ||| |||||||| |  ||||||||||| || ||| |||| |||    
T  28465188 aaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgt 28465090  T
Q  183 aattaag 189  Q
    |||||||    
T  28465089 aattaag 28465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 34789830 - 34789927
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||||| |||||||| ||||||||||    
T  34789830 aaaaaacat-atagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 26974692 - 26974788
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||| |  ||||||||||| ||||||||||||||||||    
T  26974692 aaaaaacat-atagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattcaaaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 34807190 - 34807117
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||| ||| ||  ||||  ||||||||||  || ||||||||||| |||||||| |||||||||||    
T  34807190 tttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagc 34807117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 18965239 - 18965199
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaa 132  Q
    |||||||||||||| ||||||| | ||||||||||||||||    
T  18965239 aaaaacatgatagtttaaggacgattttgttcgatttgaaa 18965199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 28166118 - 28166007
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| ||||||||| || ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  ||||||||||   | |||||    
T  28166118 taggactaaaactgcaaaaaaaat-atagtttaaggacaattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggacca 28166020  T
Q  176 aaaatgtaattaa 188  Q
    ||||| |||||||    
T  28166019 aaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 35193748 - 35193847
Alignment:
Q  90 caaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    |||||||||||||||| || ||||   |||||| ||||||||| || || ||  | |||||||| ||  ||||||||||| |||||||| ||||||||||    
T  35193748 caaaaaacatgatagttta-ggacggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaag 35193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 35644062 - 35644106
Alignment:
Q  145 atttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    |||||||||  |||||||||||||| |||||||| ||||||||||    
T  35644062 atttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 35644106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 7732919 - 7733046
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||| | ||||||||  |||||||||||  | |||||    
T  7732919 taggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaatggtaggacca 7733017  T
Q  176 aaaatgtaattaagcatttattttattat 204  Q
    ||| ||||||||||| ||| |||||||||    
T  7733018 aaagtgtaattaagccttttttttattat 7733046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 5445255 - 5445144
Alignment:
Q  66 gaatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaat 165  Q
    |||||| ||||||||| ||||||| |||||||||||||||| | ||||| |||||||| ||||||||||| || ||  | ||| ||||  ||||||||||    
T  5445255 gaatgggggttaggactaaaattgtaaaaaacatgatagtacatggactgctttgttcaatttgaaaaaggcaagaccagttttgtgagttggtcaaaat 5445156  T
Q  166 gcaatgaccaaa 177  Q
    || |||||||||    
T  5445155 gcgatgaccaaa 5445144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 5454299 - 5454188
Alignment:
Q  66 gaatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaat 165  Q
    |||||| ||||||||| ||||||| |||||||||||||||| | ||||| |||||||| ||||||||||| || ||  | ||| ||||  ||||||||||    
T  5454299 gaatgggggttaggactaaaattgtaaaaaacatgatagtacatggactgctttgttcaatttgaaaaaggcaagaccagttttgtgagttggtcaaaat 5454200  T
Q  166 gcaatgaccaaa 177  Q
    || |||||||||    
T  5454199 gcgatgaccaaa 5454188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 7732602 - 7732489
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||| ||  | ||  ||||||||||  || ||||||||||| |||||    
T  7732602 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggacca 7732504  T
Q  176 aaaatgtaattaagc 190  Q
    |||||||||||||||    
T  7732503 aaaatgtaattaagc 7732489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 28687931 - 28688046
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  ||||| ||||||||||  |||||||||||||| ||||     
T  28687931 taggactaaaagtgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggacc- 28688028  T
Q  176 aaaatgtaattaagcatt 193  Q
    ||||||||||||| ||||    
T  28688029 aaaatgtaattaaacatt 28688046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 9181859 - 9181957
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  ||||| ||||||||||| |||||||||||||| || ||||| |||||||||||    
T  9181859 aaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaagc 9181957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 25637630 - 25637741
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  25637630 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 25637728  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  25637729 aaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 39136783 - 39136687
Alignment:
Q  94 aaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||| || |||| | |||||||||||||||| || ||  |  | |||||||| ||||||||||||||| || ||||| |||||||||||    
T  39136783 aaacatgatagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaagc 39136687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 16917820 - 16917714
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||  | |||||||||||| ||||||| ||||  | ||||||||  |||||||||||  | |||||||| |||    
T  16917820 aaaactgcaaaaaacat-atagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 16917722  T
Q  183 aattaagc 190  Q
    ||||||||    
T  16917721 aattaagc 16917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 16081731 - 16081844
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||  | |||||||||||| ||| ||  | ||| ||||||||||  |||||||||||||| |||||    
T  16081731 taggactaaaactgcaaaaaacat-atagtttagggatgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggacca 16081829  T
Q  176 aaaatgtaattaagc 190  Q
    ||  |||||||||||    
T  16081830 aaggtgtaattaagc 16081844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 24929807 - 24929853
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||    
T  24929807 aatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagc 24929853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 9181646 - 9181534
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| ||||||||| || ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  9181646 taggactaaaactgcaaaaaaaat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 9181548  T
Q  176 aaaatgtaattaag 189  Q
    ||| ||||||||||    
T  9181547 aaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 26026416 - 26026320
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  ||||  |||||||||| ||||||||||| ||| |||||||| |||||||||    
T  26026416 aaaaaacat-atagtttatggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 35579006 - 35578902
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||||||||| || | ||   ||||||||||||||||  | || ||  | ||| |||| |||||||||||||||||||||||| |||    
T  35579006 aaaactgcaaaaaacatgatagtttatg-acggttttgttcgatttgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgt 35578908  T
Q  183 aattaa 188  Q
    ||||||    
T  35578907 aattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 35579324 - 35579431
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||||||||| || ||||   |||||| ||||||||| || ||| || | |||||||| ||| ||||||||| | || ||||| |||    
T  35579324 aaaactgcaaaaaacatgatagttta-ggacggttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgt 35579422  T
Q  183 aattaagca 191  Q
    |||||||||    
T  35579423 aattaagca 35579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 39388767 - 39388815
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcat 192  Q
    ||||||||||  |||||||||||||| |||||||| |||||||||||||    
T  39388767 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcat 39388815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 49064150 - 49064028
Alignment:
Q  74 gttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgac 173  Q
    |||||||| |||| |||||||| ||||||||| || |||  | ||||||| |||||||| || ||  |  | |||||||| ||||||||||| | | |||    
T  49064150 gttaggactaaaagtgcaaaaa-catgatagtttatggaagattttgttctatttgaaagaggcaataccattttcgtgagctggtcaaaatacgaggac 49064052  T
Q  174 caaaaatgtaattaagcatttatt 197  Q
    ||||| ||||||||||| ||||||    
T  49064051 caaaagtgtaattaagcctttatt 49064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 15712479 - 15712366
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| | ||||||| || ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  15712479 taggactaaaactacaaaaaatat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 15712381  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  15712380 aaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 27245250 - 27245204
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||  |||||||||||||| |||||||| |||||||||||    
T  27245250 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 27245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 786881 - 786777
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| ||||||  | |||||||||||| ||||||  ||||  | ||||||||  ||||||||||| || || ||||| |||||||||||    
T  786881 aaaaaacat-atagtttaaggaaaattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagc 786783  T
Q  191 atttat 196  Q
     |||||    
T  786782 ctttat 786777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 5745746 - 5745642
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| |||| |  | |||||||||||| ||||||| ||||  | ||||||||  |||||||||||  | |||||||| |||    
T  5745746 aaaactgcaaaaaacat-atagtttaagaaagattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgt 5745648  T
Q  183 aattaa 188  Q
    ||||||    
T  5745647 aattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 5746113 - 5746185
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||| ||| || || ||| ||||||||||  | |||||||||||| |||||||| |||||||||||    
T  5746113 tttgttcgatttaaaagaggca-gatcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaagc 5746185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 9393850 - 9393738
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||  ||||||||||||||||| || ||||   |||||||||||||||| || || ||  | |||||||| ||| ||||||||| | || ||    
T  9393850 taggactaaaacagcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagaggcaagacaattttcgtgagctgatcaaaatgcgaggatca 9393752  T
Q  176 aaaatgtaattaag 189  Q
    ||| ||||||||||    
T  9393751 aaagtgtaattaag 9393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 5184475 - 5184431
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    ||||||||||  |||||||||| ||| ||||||||||||||||||    
T  5184475 aatttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaa 5184431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 11973913 - 11973945
Alignment:
Q  156 tggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    |||||||||||||| ||||||||||||||||||    
T  11973913 tggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 10721900 - 10721785
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||||||||| || |||| | |||||||||||||||| ||||| ||  | |||||||| ||||||||||||  | |||||    
T  10721900 taggactaaaactgcaaaaaacatgatagttta-ggacgattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgtgaggacca 10721802  T
Q  176 aaaatgtaattaagcat 192  Q
    |||||||||||||||||    
T  10721801 aaaatgtaattaagcat 10721785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 16752689 - 16752583
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| || |||| | |||||||||||||||| |  |||||| | |||||||| ||||||||||||||  |||||||| |||    
T  16752689 aaaactgcaaaaaacat-atagtttatggacgattttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgt 16752591  T
Q  183 aattaagc 190  Q
    ||||||||    
T  16752590 aattaagc 16752583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 28494958 - 28494845
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||||||||| || ||||   |||||||||||||||| || ||  |  | |||| |||||||||||||||| || |||||    
T  28494958 taggactaaaactgcaaaaaacatgatagttta-ggacagttttgttcgatttgaaagaggcagaaccattttcctgaactggtcaaaatgtaaggacca 28494860  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  28494859 aaagtgtaattaagc 28494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 12220631 - 12220691
Alignment:
Q  73 ggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaa 133  Q
    ||||||||  |||||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  12220631 ggttaggatcaaaattgcaagaaacatgatagtatagggactgttttgttcgatttgaaaa 12220691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 32697725 - 32697773
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcat 192  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  32697725 aatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagcat 32697773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 13557106 - 13557016
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgc 167  Q
    |||||| |||| |||||||||||||||||| |||| || | |||||| ||||||||| || |||||  | |||||||| |||||||||||||    
T  13557106 taggactaaaactgcaaaaaacatgatagtttaag-acgattttgtttgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgc 13557016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 25974148 - 25974195
Alignment:
Q  88 tgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaag 135  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  25974148 tgcaaaaaacatgatactatagggattactttgttcgatttgaaaaag 25974195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 28289798 - 28289685
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| || ||||||||| ||| | || |||| | |||||||||||| ||| ||  |||| |||||||||||  |||||||||||||| || ||    
T  28289798 taggactaaaactggaaaaaacat-ataatttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatca 28289700  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  28289699 aaagtgtaattaagc 28289685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 28290076 - 28290189
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| |||| || | ||  | ||||||||  |||||||||||  | |||||    
T  28290076 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaatgataggaccattttcgtgagttggtcaaaatggtaggacca 28290174  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  28290175 aaagtgtaattaagc 28290189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 20266346 - 20266458
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| | ||| || ||||||||| || |||| | |||||||||||||||| ||||||||  | |||||| | ||||||||||| | | |||||    
T  20266346 taggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggacca 20266445  T
Q  176 aaaatgtaattaa 188  Q
    ||| || ||||||    
T  20266446 aaagtgcaattaa 20266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 22651760 - 22651856
Alignment:
Q  94 aaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||| ||||| || |||| | ||||||||||||||||||| ||  |  | |||||||| ||||||||||||| | ||| |||| |||||||||||    
T  22651760 aaacataatagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagc 22651856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 15029748 - 15029854
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||  | ||  | ||||||||  |||||||||||  | |||||||| |||    
T  15029748 aaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgt 15029846  T
Q  183 aattaagc 190  Q
    ||||||||    
T  15029847 aattaagc 15029854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 16753071 - 16753114
Alignment:
Q  146 tttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    ||||||||  |||||||||||| |||||||||||||||||||||    
T  16753071 tttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaag 16753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 25973951 - 25973876
Alignment:
Q  78 ggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtga 153  Q
    |||| |||| || |||||||||||||||||  |||||  ||||||||||| ||||||| |||||  ||||||||||    
T  25973951 ggaccaaaagtgaaaaaaacatgatagtatggggactgttttgttcgattcgaaaaaggcatgaccaatttcgtga 25973876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 41834506 - 41834604
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||||||| || ||||   |||||||||| ||||| || || ||  | |||||||| ||||||||||||| | |||||||| |||||||||||    
T  41834506 aaaaaacatgatagttta-ggacggttttgttcgatctgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 41834604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 18149847 - 18149734
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  ||||| |||||  | || ||    
T  18149847 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtccaaatggtaggatca 18149749  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  18149748 aaagtgtaattaagc 18149734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 8419053 - 8419179
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| ||||||||| || ||||| ||||||| | ||||||| |||| ||||||| | ||  |  |||||||  |||||||||||  | |||||    
T  8419053 taggactaaaactgcaaaaaa-at-atagtttaaggacgattttgttcaatttaaaaaagataggaccatattcgtgagttggtcaaaatggtaggacca 8419150  T
Q  176 aaaatgtaattaagcatttattttattat 204  Q
    ||| ||||||||||||||| |||| ||||    
T  8419151 aaagtgtaattaagcatttttttttttat 8419179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 14340909 - 14340953
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    ||||||||||  ||||||||||||||  |||||||||||||||||    
T  14340909 aatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 17260441 - 17260385
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaa 132  Q
    |||||| |||| |||||||||||||||| | || |||| | ||||||||||||||||    
T  17260441 taggactaaaactgcaaaaaacatgataatttatggacaattttgttcgatttgaaa 17260385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 27307168 - 27307053
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||||||||| || |||  | ||||||| |||||||| | ||||||  | |||| | |  |||||||||||| |  ||||||| |||    
T  27307168 aaaactgcaaaaaacatgatagttta-ggatgattttgttcaatttgaaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgt 27307070  T
Q  183 aattaagcatttatttt 199  Q
    |||||||| ||||||||    
T  27307069 aattaagcctttatttt 27307053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 36701534 - 36701640
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||||||||| || |||  | |||||||||||||||| ||||||||  | |||||||| ||||||||||||| | |||||||| |||    
T  36701534 aaaactgcaaaaaacatgatagtttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgt 36701633  T
Q  183 aattaag 189  Q
    |||||||    
T  36701634 aattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 44676904 - 44677015
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |||||||||||| ||||||| ||||  | ||||||||  |||||||||||  | |||||    
T  44676904 taggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggacca 44677002  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  44677003 aaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 36701206 - 36701107
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||||||| || |||| | |||||||||||||||| || |||||| | ||||||||  || ||||||||| | |||||||| |||||||||||    
T  36701206 aaaaaacatgatagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaagc 36701107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 2323493 - 2323382
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||||||||||||||||||||| || |||    |||||||||||||||| || ||  || | ||| |||||||||||||||||| | ||| |    
T  2323493 taggactaaaattgcaaaaaacatgatagttta-ggatggttttgttcgatttgaaagaggcagtataatttttgtgaactggtcaaaatgcgaggacaa 2323395  T
Q  176 aaaatgtaattaa 188  Q
    |||||||||||||    
T  2323394 aaaatgtaattaa 2323382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 49951660 - 49951549
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  49951660 taggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 49951562  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  49951561 aaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 27199776 - 27199705
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    |||||||||||||||| || |||||  | |||||||| ||||||||||||| | ||||||||||||||||||    
T  27199776 tttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaa 27199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 43222497 - 43222391
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| || |||| | |||||||||||| ||| |||||| | || ||||||||  |||||||||||  ||||||||||| ||    
T  43222497 aaaaatgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgt 43222399  T
Q  183 aattaagc 190  Q
    ||||||||    
T  43222398 aattaagc 43222391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 49951985 - 49952091
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| ||||||||||||| |||| ||| ||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||||| ||||||||||||    
T  49951985 aaaactgcaaaaaacatg-tagtttaatgacgattttgttcgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgt 49952083  T
Q  183 aattaagc 190  Q
    ||||||||    
T  49952084 aattaagc 49952091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 50662844 - 50662957
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| |||| || ||||||||  | |||||||||  | |||||    
T  50662844 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatatgactattttcgtgagtttgtcaaaatggtaggacca 50662942  T
Q  176 aaaatgtaattaagc 190  Q
    ||| | |||||||||    
T  50662943 aaagtataattaagc 50662957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 51828071 - 51827958
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||||| |||||    
T  51828071 taggactaaaaatgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggacca 51827973  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  51827972 aaagtgtaattaagc 51827958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 40490697 - 40490793
Alignment:
Q  73 ggttaggacgaaaattgcaaaaaacat--gatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgc 167  Q
    ||||||||| |||||||||||||| ||  |||||| ||  |||| ||||||||||||| |||||   ||||| ||||||||||| ||||||||||||    
T  40490697 ggttaggacaaaaattgcaaaaaaaatatgatagtttagagactgctttgttcgatttaaaaaatgtatgatcaatttcgtgaattggtcaaaatgc 40490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 16701239 - 16701337
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| ||||||| | ||||||||| || ||||||| ||||  | ||||||||  |||||||||||  | ||||||||||||||||||||    
T  16701239 aaaaaacat-atagtttaaggacgattttgttcgaattaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagc 16701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 27200130 - 27200236
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||||||||| || ||||    ||||||||||||||| || ||  |  | |||||||| ||||||||||||||| |||||||| |||    
T  27200130 aaaactgcaaaaaacatgatagttta-ggacggtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgt 27200228  T
Q  183 aattaagc 190  Q
    ||||||||    
T  27200229 aattaagc 27200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 37076121 - 37076219
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||||||| || |||| | |||||||||||||||| || |  ||  | |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  37076121 aaaaaacatgatagttta-ggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaagc 37076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 39010182 - 39010076
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| | ||| |||| || | |||||||||||| ||| ||  ||||  ||||| ||||  |||||||||||||| ||||||||||||    
T  39010182 aaaactgcaaaaaacat-acagtttaagaacaattttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgt 39010084  T
Q  183 aattaagc 190  Q
    ||||||||    
T  39010083 aattaagc 39010076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 43678402 - 43678296
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| ||||  |  |||||||  |||||||||||  | |||||||| |||    
T  43678402 aaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgt 43678304  T
Q  183 aattaagc 190  Q
    ||||||||    
T  43678303 aattaagc 43678296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 49720800 - 49720906
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| ||||  | ||||||||  ||||||||||   | |||||||| |||    
T  49720800 aaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatagtaggaccaaaagtgt 49720898  T
Q  183 aattaagc 190  Q
    ||||||||    
T  49720899 aattaagc 49720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 14654688 - 14654745
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcatttattttat 201  Q
    ||||||||||  |||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  14654688 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctttcttttat 14654745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 49407870 - 49407797
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||| |||||||| || |||||  | |||||||| ||||||||||||| | |||||||| |||||||||||    
T  49407870 tttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 49407797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 329960 - 329850
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||  | ||  | ||||||||  ||||||||||| ||  ||||    
T  329960 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagttggtcaaaatggaagaacca 329862  T
Q  176 aaaatgtaatta 187  Q
    ||| ||||||||    
T  329861 aaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 46013529 - 46013423
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||| | || |||| | |||||||||||| ||| ||  ||||  ||||||||||  |||||||||||||| || ||||| |||    
T  46013529 aaaactgcaaaaaacat-atactttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgt 46013431  T
Q  183 aattaagc 190  Q
    ||||||||    
T  46013430 aattaagc 46013423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 38535411 - 38535310
Alignment:
Q  88 tgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaatta 187  Q
    |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | |||| |||  |||||||||||  | |||||||| ||||||||    
T  38535411 tgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaatta 38535313  T
Q  188 agc 190  Q
    |||    
T  38535312 agc 38535310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 44676574 - 44676473
Alignment:
Q  88 tgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaatta 187  Q
    |||||||||||| ||||| || ||||   |||||||||||| ||| ||  ||||| |||||| |||  | |||||||||||| |||||||| ||||||||    
T  44676574 tgcaaaaaacat-atagtttagggacggttttgttcgatttaaaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaatta 44676476  T
Q  188 agc 190  Q
    |||    
T  44676475 agc 44676473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 16689472 - 16689361
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||| | || |||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||| | |||||    
T  16689472 taggactaaaactgcaaaaaacat-atattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgctaggacca 16689374  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  16689373 aaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 30513792 - 30513724
Alignment:
Q  121 ttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    |||||||| ||||||| | ||  | ||||||||  | |||||||||||| |||||||||||||||||||    
T  30513792 ttcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaag 30513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 50419504 - 50419440
Alignment:
Q  77 aggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatga 141  Q
    ||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50419504 aggaccaaaagtgtaaaaaacatgatagtacaaggactactttgttcgatttgaaaaagacatga 50419440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 44802609 - 44802716
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||||||||| || |||| | |||||||  ||||||| || |||||  | |||||||| ||||||||||||||| |||||||| |||    
T  44802609 aaaactgcaaaaaacatgatagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgt 44802708  T
Q  183 aattaagc 190  Q
    ||||||||    
T  44802709 aattaagc 44802716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 50926352 - 50926232
Alignment:
Q  70 ggaggttaggacgaaaattgcaaaaaaca-tgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgca 168  Q
    |||||| ||||| |||| ||||||||| | ||||||| || |||| | |||||||||||||||| ||  ||||||| |||||||| ||||||||||||      
T  50926352 ggaggtaaggactaaaactgcaaaaaaaaatgatagtttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatggg 50926253  T
Q  169 atgaccaaaaatgtaattaag 189  Q
    | |||||||| ||||||||||    
T  50926252 aggaccaaaactgtaattaag 50926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 1837612 - 1837506
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||| ||||| ||||||||||  || ||||||||||| |||||||| |||    
T  1837612 aaaactgcaaaaaacat-atagtttagggacaattttgttcgatttaaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgt 1837514  T
Q  183 aattaagc 190  Q
    ||||||||    
T  1837513 aattaagc 1837506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 2868018 - 2867913
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||| ||| | |||||||||||| ||| ||| ||||| | ||||||||  |||||||||||| |||||||||| |||    
T  2868018 aaaactgcaaaaaacat-atagtttaacgacaattttgttcgatttaaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgt 2867920  T
Q  183 aattaag 189  Q
    |||||||    
T  2867919 aattaag 2867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 16298796 - 16298683
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  ||||  ||||||||||  |||||||||||||| | |||    
T  16298796 taggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaagggcca 16298698  T
Q  176 aaaatgtaattaagc 190  Q
    |||||||||||||||    
T  16298697 aaaatgtaattaagc 16298683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 52233862 - 52233796
Alignment:
Q  67 aatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaa 133  Q
    ||||| ||||| ||| |||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  52233862 aatgggggttatgaccaaaattgcaaaaaacatgatagtatagggactgctttgttcgacttgaaaa 52233796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 39843457 - 39843569
Alignment:
Q  77 aggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaa 176  Q
    ||||| |||| |||| |||||||||||||||| ||||||| |||||||||||||||||| || ||  ||||||||||  ||||| |||||| | |||| |    
T  39843457 aggaccaaaagtgcataaaacatgatagtatatggactac-ttgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccga 39843555  T
Q  177 aaatgtaattaagc 190  Q
    || |||||| ||||    
T  39843556 aagtgtaataaagc 39843569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 50926674 - 50926786
Alignment:
Q  77 aggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaa 176  Q
    ||||| |||| ||||||||| |||||||| || ||||   |||||||||||||||| ||||  ||  | |||||||| ||||||||||||| ||||||||    
T  50926674 aggactaaaactgcaaaaaa-atgatagtttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaa 50926772  T
Q  177 aaatgtaattaagc 190  Q
    || |||||||||||    
T  50926773 aagtgtaattaagc 50926786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 52235096 - 52235213
Alignment:
Q  73 ggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatga 172  Q
    ||||||||| |||||||||| ||||||||||||||| ||||| ||| |||||||||||||| | || ||| | ||||||||  |||| |||||   | ||    
T  52235096 ggttaggaccaaaattgcaagaaacatgatagtatagggactgcttcgttcgatttgaaaagggcaggatcagtttcgtgagttggttaaaatctgagga 52235195  T
Q  173 ccaaaaatgtaattaagc 190  Q
     ||||| |||||||||||    
T  52235196 tcaaaagtgtaattaagc 52235213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 45048567 - 45048678
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||||||||| || ||||   ||||||||||| |||| ||  ||||  | |||||||||||||||||||||| | |||||    
T  45048567 taggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggacca 45048665  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  45048666 aaagtgtaattaa 45048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 4080120 - 4080008
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||| ||||||||||  ||||||| |||||| |||||||| ||||||| |||    
T  4080120 aaaaaacat-atagtttagggacgattttgttcgatttaaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaattgagc 4080022  T
Q  191 atttattttattat 204  Q
     |||||||||||||    
T  4080021 ctttattttattat 4080008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 29438977 - 29438916
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcatttattttattata 205  Q
    ||||||||||  |||||||||||||| |||||||| ||||||||||| ||| ||||||||||    
T  29438977 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctttgttttattata 29438916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 39843277 - 39843209
Alignment:
Q  67 aatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaag 135  Q
    ||||| ||| ||||| |||| ||||||||||||||||||||| ||||   |||||||||||||||||||    
T  39843277 aatgggggtaaggaccaaaagtgcaaaaaacatgatagtatagggaccgttttgttcgatttgaaaaag 39843209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 44954658 - 44954781
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||  | |||||| ||||| ||||||  ||||| | |||| |||  |||||||||||| | |||||    
T  44954658 taggactaaaactgcaaaaaacat-atagtttatggatgattttgtttgatttaaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggacca 44954756  T
Q  176 aaaatgtaattaagcatttatttta 200  Q
    ||| ||||||||||| |||||||||    
T  44954757 aaagtgtaattaagcttttatttta 44954781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 50419698 - 50419805
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| ||||||||||||||||||| | ||||   ||||||| |||| |||||| || ||  ||||||||||  ||||| |||||| |||||||||| ||     
T  50419698 aaaagtgcaaaaaacatgatagtacagggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgc 50419797  T
Q  183 aattaagc 190  Q
    ||||||||    
T  50419798 aattaagc 50419805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 10278647 - 10278550
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||| ||||||||||  |||||||||||||| |||||||| ||||||||||    
T  10278647 aaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 198
Target Start/End: Complemental strand, 21938677 - 21938556
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||||||| | ||| | ||||||||  || ||||||||  | |||||    
T  21938677 taggactaaaactgcaaaaaacat-atagtttatggacgattttgttcgatttaaaaaagataagatcattttcgtgagttgatcaaaatggtaagacca 21938579  T
Q  176 aaaatgtaattaagcatttattt 198  Q
    ||| ||||||||| | |||||||    
T  21938578 aaagtgtaattaaacctttattt 21938556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 23340257 - 23340184
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||| ||| ||| | ||  ||||||||||  ||||||||||||||||| ||||| |||||||||||    
T  23340257 tttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagc 23340184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 37421259 - 37421163
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||| |||||||||||||| |||||||| |||||||||    
T  37421259 aaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 39485179 - 39485068
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||||||| ||  | ||  | |||||||| || |||||||||| | |||||    
T  39485179 taggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggacca 39485081  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  39485080 aaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 9833583 - 9833670
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaa 163  Q
    |||||| |||| |||||||||||| ||| | || |||| | |||||||||||||||| || ||||| || ||||||||  ||||||||    
T  9833583 taggactaaaactgcaaaaaacataatattttagggacgattttgttcgatttgaaagaggcatgactattttcgtgagttggtcaaa 9833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 17088245 - 17088147
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||||||| || ||||   |||||||||||||||| || ||  |  | |||||||| ||||||||||||| |||||||| | |||||||||||    
T  17088245 aaaaaacatgatagttta-ggacggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaagc 17088147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 443983 - 444096
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || | || | |||||||||||| ||| ||  ||||  ||||||||||  |||||||||||||| || ||    
T  443983 taggactaaaactgcaaaaaacat-atagtttaggaacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatca 444081  T
Q  176 aaaatgtaattaagc 190  Q
    ||| | |||||||||    
T  444082 aaagtataattaagc 444096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 9992599 - 9992700
Alignment:
Q  88 tgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaatta 187  Q
    |||||||||||| ||||| |||| || | |||||||||||| ||||||| | ||  | |||| |||  | |||||||||||| |||||||| ||||||||    
T  9992599 tgcaaaaaacat-atagtttaagcacgattttgttcgatttaaaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaatta 9992697  T
Q  188 agc 190  Q
    |||    
T  9992698 agc 9992700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 25274830 - 25274760
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaatta 187  Q
    |||||||||||||||| || |||||  | |||||||| ||||||||||||| | |||||||| || |||||    
T  25274830 tttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgcaatta 25274760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 29020988 - 29020930
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatga 141  Q
    ||||||||||||||||||||| | ||||||  | |||||||||||| ||| ||||||||    
T  29020988 aaaattgcaaaaaacatgataatttaaggatgattttgttcgatttaaaagagacatga 29020930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 44291401 - 44291303
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaag 189  Q
    ||||||||||||||| || |||| | ||||||| |||||||| || ||| |  | |||||||| ||||||||||||  | |||||||| || |||||||    
T  44291401 aaaaaacatgatagtttatggacgattttgttcaatttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaag 44291303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 29021337 - 29021410
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||||||| || |||||  | |||||||| ||||||||||||  | |||||||| || ||||||||    
T  29021337 tttgttcgatttgaaagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagc 29021410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 9992269 - 9992210
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaaga 136  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| |||||||    
T  9992269 taggactaaaactgcaaaaaacat-atagtttaaggaccattttgttcgatttaaaaaaga 9992210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 33920726 - 33920609
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||| ||| ||||| || |||| | |||||||||||| ||| ||  ||||| ||||||||||  |||||||||||||| |||||    
T  33920726 taggactaaaactgcaaaaatcat-atagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggacca 33920628  T
Q  176 aaaatgtaattaagcattt 194  Q
    ||||||||||||| |||||    
T  33920627 aaaatgtaattaaccattt 33920609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 3823045 - 3822924
Alignment:
Q  67 aatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatg 166  Q
    ||||| ||||| ||| |||||||||||||||||||||||||| ||| | ||||||||| ||| |||| | || ||| |||||| |||  |||| ||||||    
T  3823045 aatgggggttatgaccaaaattgcaaaaaacatgatagtatagggagtgctttgttcggtttaaaaagggcaggatcaatttcatgagttggttaaaatg 3822946  T
Q  167 caatgaccaaaaatgtaattaa 188  Q
    | | |||||||| |||||||||    
T  3822945 cgaggaccaaaagtgtaattaa 3822924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 3824130 - 3824251
Alignment:
Q  67 aatggaggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatg 166  Q
    ||||| |||||| || |||||||||||||||||||||| ||| | |||  |||||||||||| |||| | |||||  ||||||||||  |||| ||||||    
T  3824130 aatgggggttagaactaaaattgcaaaaaacatgatagcatatgaactgttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatg 3824229  T
Q  167 caatgaccaaaaatgtaattaa 188  Q
    | |||||||||| | |||||||    
T  3824230 cgatgaccaaaagtataattaa 3824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 14942292 - 14942391
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||||| | || |||| | |||||||||||||||| ||||| ||  | |||||||| ||||||||||||| | |||||||| |||||||||||    
T  14942292 aaaaaacatgataatttatggacaattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagc 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 2190506 - 2190609
Alignment:
Q  76 taggacgaaaattgcaaaaaa-catgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacc 174  Q
    |||||| |||| ||||||||| | ||||| | || |||| | ||||||||||||||||||| || ||  |||||||||| ||||||||||||| ||||||    
T  2190506 taggactaaaactgcaaaaaagcgtgataatttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgacc 2190605  T
Q  175 aaaa 178  Q
    ||||    
T  2190606 aaaa 2190609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 31797209 - 31797331
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || ||||   |||||||||||||||| || |||||  | |||||||| ||||||||||||  | |||||    
T  31797209 taggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgtgaggacca 31797307  T
Q  176 aaaatgtaattaagcatttatttt 199  Q
    ||| ||||||||||| ||| ||||    
T  31797308 aaagtgtaattaagcctttttttt 31797331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 38008383 - 38008505
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  |||||||||||  | |||||    
T  38008383 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 38008481  T
Q  176 aaaatgtaattaagcatttatttt 199  Q
    ||| ||||||||||| ||| ||||    
T  38008482 aaagtgtaattaagcctttttttt 38008505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 4355869 - 4355756
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  ||||  ||||||||||   ||||||||||||| |||||    
T  4355869 taggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggacca 4355771  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  4355770 aaagtgtaattaagc 4355756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 20128169 - 20128282
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |||||| ||||| ||| ||  | ||  ||||||||||  |||| ||||||||| |||||    
T  20128169 taggactaaaattgcaaaaaacat-atagtttaaggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggacca 20128267  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  20128268 aaagtgtaattaagc 20128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 190
Target Start/End: Original strand, 28143476 - 28143574
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||||| || |||| | |||||||||||||||| || || ||  | |||||||| ||||||||||||| | |||||||| || ||||||||    
T  28143476 aaaaacatgatagtttagggacgattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagc 28143574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 20127835 - 20127727
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||| |||||||||||  | |||||||| |||||||||||    
T  20127835 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagc 20127737  T
Q  191 atttatttta 200  Q
     ||| |||||    
T  20127736 ctttttttta 20127727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 34465745 - 34465800
Alignment:
Q  203 atattgcaaatcccttattgagttgggagatctattgtcagtattgtgtctgggaag 259  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  34465745 atatttcaaatcccttattgagttggg-gatctattgtcaggattgtgtttgggaag 34465800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 4356195 - 4356301
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| ||||  | | ||||||  |||||||||||  | |||||||| |||    
T  4356195 aaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgt 4356293  T
Q  183 aattaagc 190  Q
    ||||||||    
T  4356294 aattaagc 4356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 63071 - 62958
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||  | ||  | ||||||||  ||||||||||| || |||||    
T  63071 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatggaaggacca 62973  T
Q  176 aaaatgtaattaagc 190  Q
     || |||||||||||    
T  62972 taagtgtaattaagc 62958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 9330267 - 9330348
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcatttattt 198  Q
    |||||||||||| ||| ||  ||||  ||||||||||  |||||||||||||| |||||||| ||||||||| | |||||||    
T  9330267 tttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaaacttttattt 9330348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 43160124 - 43160012
Alignment:
Q  76 taggacgaaaattgcaaaaaacatg-atagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacc 174  Q
    |||||| |||| ||||||||| ||| ||||| || |||| | |||||||||||| ||| ||  ||||  ||||||||||  || ||||||||||| ||||    
T  43160124 taggactaaaactgcaaaaaa-atgtatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggacc 43160026  T
Q  175 aaaaatgtaattaa 188  Q
    ||||||||||||||    
T  43160025 aaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 4808993 - 4808882
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| | |||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||| ||||||||||  ||||||||||||||  || |    
T  4808993 taggactaaaactacaaaaaacat-atagtttatggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaacta 4808895  T
Q  176 aaaatgtaattaa 188  Q
    |||||||||||||    
T  4808894 aaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 5560158 - 5560043
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| ||||||||| || ||||| ||||||| | ||||||| |||| ||||||| ||||  | ||||||||  |||||||||||  | |||||||| |||    
T  5560158 aaaactgcaaaaaatat-atagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 5560060  T
Q  183 aattaagcatttatttt 199  Q
    |||||||| || |||||    
T  5560059 aattaagccttaatttt 5560043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 32418206 - 32418142
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcatttattttattatattg 208  Q
    ||||||||||  |||||||||||||| ||||| || ||||||||||| || |||||| |||||||    
T  32418206 aatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagccttaattttactatattg 32418142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 4809311 - 4809433
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| ||||||||| |||| ||||| | | ||  | ||||||||  | |||||||||  | |||||    
T  4809311 taggactaaaactgcaaaaaacat-atagtttaaggacgactttgttcaatttaaaaaacataggaccattttcgtgagttagtcaaaatggtaggacca 4809409  T
Q  176 aaaatgtaattaagcatttatttt 199  Q
    ||| ||||||||||| ||| ||||    
T  4809410 aaagtgtaattaagcctttttttt 4809433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 38008049 - 38007951
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| || |||| | |||||||||||| ||| ||  | ||  ||||||||||  |||||||||||||| |||||||| |||||||||||    
T  38008049 aaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 38007951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 6949943 - 6949989
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||  |||||||||||||| |||||||| |||||||||||    
T  6949943 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 6949989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 25336099 - 25336145
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||  |||||||||||||| |||||||| |||||||||||    
T  25336099 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 25336145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 44219758 - 44219645
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||| | ||||||| | |||||||||||| ||||||  | ||| | ||| ||||  || |||||||| || |||||    
T  44219758 taggactaaaactgcaaaaaacat-ataatttaaggacaattttgttcgatttaaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggacca 44219660  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  44219659 aaagtgtaattaagc 44219645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 20495301 - 20495196
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| ||||||||| |||||||| || |||| | |||||| ||||| ||| || |||||| | ||||||||  |||||||||||| |  ||||||| ||     
T  20495301 aaaagtgcaaaaaatatgatagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtga 20495202  T
Q  183 aattaa 188  Q
    ||||||    
T  20495201 aattaa 20495196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 42192744 - 42192797
Alignment:
Q  146 tttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcatttatttt 199  Q
    ||||||||  |||||||||||| | |||||||| ||||||||||| ||||||||    
T  42192744 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctttatttt 42192797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 11539736 - 11539633
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||| ||||| ||||||| | |||||||||||| ||||| | | ||  | ||||||||  |||||||||||  | |||||||| |||||||||||    
T  11539736 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 11539638  T
Q  191 attta 195  Q
     ||||    
T  11539637 cttta 11539633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 16175797 - 16175892
Alignment:
Q  91 aaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaatta 187  Q
    ||||||||| ||||| ||||||| | |||||||||||| ||| ||  ||||  ||||||||||  |||| |||||| || |||||||| ||||||||    
T  16175797 aaaaaacat-atagtttaaggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 31574164 - 31574280
Alignment:
Q  83 aaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgt 182  Q
    |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  |||| |||||||||||  |||||||||||||| |||||||| |||    
T  31574164 aaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgt 31574262  T
Q  183 aattaagcatttatttta 200  Q
    |||||||| ||| |||||    
T  31574263 aattaagcctttttttta 31574280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 5120901 - 5121014
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| || |||| | |||||||||||| ||| ||  | || |||||||||||  |||||||||||||| |||||    
T  5120901 taggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaagaggtaggaataatttcgtgagttggtcaaaatgcaaggacca 5120999  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  5121000 aaagtgtaattaagc 5121014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 31073574 - 31073687
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||| ||||||| ||||| || |||| | |||||||||||| ||| ||  ||||  |||||||||| ||||||||||||||| |||||    
T  31073574 taggactaaaactgcacaaaacat-atagtttagggacaattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggacca 31073672  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  31073673 aaagtgtaattaagc 31073687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 32836428 - 32836541
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| | ||| |||| ||   |||||||||||||||| || |||||  | |||||||| ||||||||||||||| ||| |    
T  32836428 taggactaaaactgcaaaaaacat-acagtttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggacta 32836526  T
Q  176 aaaatgtaattaagc 190  Q
    ||| |||||||||||    
T  32836527 aaagtgtaattaagc 32836541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 5114582 - 5114458
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| | ||  | ||||||||  || ||||||||  | || ||    
T  5114582 taggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggatca 5114484  T
Q  176 aaaatgtaattaagcatttattttat 201  Q
    ||||||||||||||| || |||||||    
T  5114483 aaaatgtaattaagccttcattttat 5114458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 35163298 - 35163187
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgacca 175  Q
    |||||| |||| |||||||||||||||||| || ||||   |||||||||||||||| ||||| ||  | ||| |||| ||||||||||||| | ||| |    
T  35163298 taggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgaggacta 35163200  T
Q  176 aaaatgtaattaa 188  Q
    ||| |||||||||    
T  35163199 aaagtgtaattaa 35163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 28636339 - 28636293
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  28636339 aatttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaagc 28636293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 33096038 - 33096156
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggac----tactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatg 171  Q
    |||||| ||||||||||||||||||||||| |||||||       |||||||||||||||| ||||||||  | |||| ||| ||||| ||||||| | |    
T  33096038 taggactaaaattgcaaaaaacatgatagtttaaggacagttggttttgttcgatttgaaagagacatgaccattttcatgagctggtaaaaatgcgaag 33096137  T
Q  172 accaaaaatgtaattaagc 190  Q
    | ||||| || ||||||||    
T  33096138 aacaaaagtgcaattaagc 33096156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 25468947 - 25468852
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaa 188  Q
    |||||||| ||||| || |||| | |||||||||||| ||| ||| ||||  ||||||||||  ||||||||||| || |||||||| |||||||||    
T  25468947 aaaaacat-atagtttagggacgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 30250768 - 30250721
Alignment:
Q  144 aatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagca 191  Q
    ||||||||||  |||||||||||||| |||||||| ||||||||||||    
T  30250768 aatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagca 30250721  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 33095829 - 33095773
Alignment:
Q  76 taggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaa 132  Q
    |||||| |||| |||||||||||||||||| || ||||   ||||||||||||||||    
T  33095829 taggactaaaactgcaaaaaacatgatagtttagggacggttttgttcgatttgaaa 33095773  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 61146 - 61086
Alignment:
Q  73 ggttaggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaa 133  Q
    ||||| ||| ||||||||||||| |||||||||||| ||||| |||||||| |||| ||||    
T  61146 ggttatgaccaaaattgcaaaaagcatgatagtatagggactgctttgttctattttaaaa 61086  T

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Target: scaffold0108 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 15187 - 15109
Alignment:
Q  117 tttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagcattta 195  Q
    |||||||||||||||| || ||  || | ||||| || ||||||||||||| |||||||||| | ||||||||| ||||    
T  15187 tttgttcgatttgaaagaggcagaatcattttcgcgagctggtcaaaatgcgatgaccaaaagtataattaagccttta 15109  T

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Target: scaffold0108; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 190
Target Start/End: Original strand, 15545 - 15643
Alignment:
Q  92 aaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaaaaatgtaattaagc 190  Q
    |||||||||||||| || ||||   |||||||||||||||| || || ||  | |||||||| ||| ||||||||| |  ||||||||| |||||||||    
T  15545 aaaaacatgatagtttagggacagttttgttcgatttgaaagagtcaggaccattttcgtgagctgatcaaaatgcgagaaccaaaaatctaattaagc 15643  T

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Target: scaffold1432 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 498 - 610
Alignment:
Q  77 aggacgaaaattgcaaaaaacatgatagtataaggactactttgttcgatttgaaaaagacatgattaatttcgtgaactggtcaaaatgcaatgaccaa 176  Q
    ||||| |||| |||||||||||| ||||| ||  ||||  |||||||||||||||| || || ||  | |||||||| || |||||||||| | || |||    
T  498 aggaccaaaactgcaaaaaacat-atagtttagagactgttttgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaa 596  T
Q  177 aaatgtaattaagc 190  Q
    || |||||||||||    
T  597 aagtgtaattaagc 610  T

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