View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14193_high_1 (Length: 280)
Name: NF14193_high_1
Description: NF14193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14193_high_1 |
 |  |
|
| [»] chr7 (16 HSPs) |
 |  |
|
| [»] chr1 (1 HSPs) |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 22840354 - 22840633
Alignment:
| Q |
1 |
ctggaagggtgtttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaact |
100 |
Q |
| |
|
||||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| ||||| |
|
|
| T |
22840354 |
ctggaagtgtttttgaaaactataggatttggatagaaagcttgtcctttttcttgttttgtatcattggtgagtcttagtaagccagttgaggctaact |
22840453 |
T |
 |
| Q |
101 |
cagctgtaccatcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaa |
200 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22840454 |
cagcggtaccatcaagatataaatttgatgattggaatccattatatttatagatgaaactgttgtctatacttgctaccaatgtaacatgaaaaaacaa |
22840553 |
T |
 |
| Q |
201 |
catgaacacaagtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattattt |
280 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22840554 |
catgaacacaagtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattattt |
22840633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 22805611 - 22805884
Alignment:
| Q |
1 |
ctggaagggtgtttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaact |
100 |
Q |
| |
|
||||||| || ||||||||| || ||||||||||||||||| || ||| || | |||| ||||||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
22805611 |
ctggaagtgtttttgaaaactattggatttggatagaaagcatgacctattacttgttctgtatcattggtgagtcttagtatgccatctgaggttaact |
22805710 |
T |
 |
| Q |
101 |
cagctgtaccatcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaa |
200 |
Q |
| |
|
|||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
22805711 |
cagcaaaaccatcaagatataaatgtgatgattggaatccattat------agatgaaactgttatcttcacttgctactaatgtaacatgaaaaaacaa |
22805804 |
T |
 |
| Q |
201 |
catgaacacaagtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattattt |
280 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||| |
|
|
| T |
22805805 |
cataaacacaagtttgaggaacatgattatagtttgagaatgaataatgcttgtgtagttctgttcggtgtttattattt |
22805884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 280
Target Start/End: Original strand, 22876219 - 22876490
Alignment:
| Q |
2 |
tggaagggtgtttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactc |
101 |
Q |
| |
|
|||||| || ||||||||| |||||||||||||||||| | ||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
22876219 |
tggaagtgtttttgaaaactataggatttggatagaaaccatgtcctttttcatattctgtatcattggtgagttttagtaagccatttgaggttaactc |
22876318 |
T |
 |
| Q |
102 |
agctgtaccatcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaac |
201 |
Q |
| |
|
||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| || |||||||| |
|
|
| T |
22876319 |
agcaataccatcaagatataaatttgatgattggaatcca------ttatagatgaaactgttttcttcacttgctaccaatgtaacaagataaaacaac |
22876412 |
T |
 |
| Q |
202 |
atgaacacaagtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattattt |
280 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||| || ||| |||||| || ||||||||| |||||||||||| |
|
|
| T |
22876413 |
atgaacacaagcctgaagaacatgattatagtttgtggat-aataatgcttatgcagttctgttgattgtttattattt |
22876490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 12 - 263
Target Start/End: Original strand, 22809957 - 22810202
Alignment:
| Q |
12 |
tttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactcagctgtacca |
111 |
Q |
| |
|
||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||| ||||| |
|
|
| T |
22809957 |
tttgaaaactacaggatttggatagaaagcatgtcctttttcatgttctgtatcattggtgagtcttagtaagccatctggggttaactcagcaatacca |
22810056 |
T |
 |
| Q |
112 |
tcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaa |
211 |
Q |
| |
|
||||||||||| | |||||||||||| ||| ||||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||| ||||||| |
|
|
| T |
22810057 |
tcaagatataaatgtgatgattggaaacca------ttatagatgaaactgttatctttacttgctactaatgtaacaagaaaaaacaacataaacacaa |
22810150 |
T |
 |
| Q |
212 |
gtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctg |
263 |
Q |
| |
|
| |||| ||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
22810151 |
gcttgaggaacatgattatagtttgtgaatgaataatgcttctgtagttctg |
22810202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 22815330 - 22815596
Alignment:
| Q |
2 |
tggaagggtgtttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactc |
101 |
Q |
| |
|
|||||| || ||||||||| |||||||||||||||||||| | |||||| | || ||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
22815330 |
tggaagtgtttttgaaaactataggatttggatagaaagcatatcctttggctctttctgtatcattggtgagttttagtaagccatttgaggttaactc |
22815429 |
T |
 |
| Q |
102 |
agctgtaccatcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaac |
201 |
Q |
| |
|
||| |||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22815430 |
agcaataccatcaagatttaaatgtgatgattggaatccattatat------atgaaactgttgtctacacttgctaccaatgtaacgagaaaaaacaac |
22815523 |
T |
 |
| Q |
202 |
atgaacacaagtttgatgaacatgatta-tagtttgtgaataaatgatgcttctgtagttctgtttggtgttt |
273 |
Q |
| |
|
||||||||| |||||| ||||||||||| |||||||||||| || ||||||||||||||||||||| ||||| |
|
|
| T |
22815524 |
atgaacacatgtttgaggaacatgattattagtttgtgaatgaacaatgcttctgtagttctgtttgatgttt |
22815596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 22898577 - 22898836
Alignment:
| Q |
13 |
ttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactcagctgtaccat |
112 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||| ||||||| || || |||||||||| |||||| ||||||||||| |||||||| | ||| |||||| |
|
|
| T |
22898577 |
ttgaaaactataggatttggatagaaagcatgtgctttttcttgcttggtatcattggtgagtctaagtaagccattggaggttaaattagcaataccat |
22898676 |
T |
 |
| Q |
113 |
caagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaag |
212 |
Q |
| |
|
|||||||||| | |||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22898677 |
caagatataaatgtgatgattggaaaccattat------agatgaaactgttatctttacttgctaccaatgtaacatgaaaaaacaacatgaacgcaag |
22898770 |
T |
 |
| Q |
213 |
tttgatgaacatgatta---tagtttgtgaataaatgatgcttctgtagttctgtttggtgtttatt |
276 |
Q |
| |
|
|||| ||||||||||| |||||||||||| ||| ||| |||||||||||||||| ||||||||| |
|
|
| T |
22898771 |
cttgaggaacatgattatagtagtttgtgaat-aataatgattctgtagttctgtttagtgtttatt |
22898836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 61 - 280
Target Start/End: Original strand, 22831393 - 22831606
Alignment:
| Q |
61 |
gtatcattggagagtcttagtaagccatttgaggttaactcagctgtaccatcaagatataagtttgatgattggaatccattatatttatagatgaaac |
160 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||| | |||||||||||| ||||||| ||||||||| |
|
|
| T |
22831393 |
gtatcattggtgagtcttagtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaaaccattat------agatgaaac |
22831486 |
T |
 |
| Q |
161 |
tgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaagtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagtt |
260 |
Q |
| |
|
|| |||||||||||||||| ||||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
22831487 |
tgctgtcttcacttgctacaaatgtaacaagaaaaaacaacataaacacaagcttgaggaacatgattatagtttgtgaatgaataatgcttgtgtagtt |
22831586 |
T |
 |
| Q |
261 |
ctgtttggtgtttattattt |
280 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
22831587 |
ctgttcggtgtttattattt |
22831606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 12 - 263
Target Start/End: Original strand, 22842477 - 22842728
Alignment:
| Q |
12 |
tttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactcagctgtacca |
111 |
Q |
| |
|
||||||||| || || |||||||| ||||| || ||||| | |||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
22842477 |
tttgaaaactattggttttggatataaagcatgacctttgtattgttttgtatcattggtgagtcttggtaagccacctgaggttaactcagcaatacca |
22842576 |
T |
 |
| Q |
112 |
tcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaa |
211 |
Q |
| |
|
|||||||| || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
22842577 |
tcaagatacaaatgaaatgattggaatcctctattattatagatgaaactgttgtcttcacttgctaccaatgtaacaagaaaaaacaacataaacacaa |
22842676 |
T |
 |
| Q |
212 |
gtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctg |
263 |
Q |
| |
|
| |||| |||||||||||| |||||||||| || ||||||||||||||||| |
|
|
| T |
22842677 |
gcttgaggaacatgattattgtttgtgaatgaacaatgcttctgtagttctg |
22842728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 22889594 - 22889830
Alignment:
| Q |
1 |
ctggaagggtgtttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaact |
100 |
Q |
| |
|
||||||| || ||||||||| || ||||||||||||||| | |||||||| || || ||||||||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
22889594 |
ctggaagtgtttttgaaaactattggatttggatagaaaccatgtcctttgtctctttctgtatcattggtgagttttagtaagccatttgtagttaact |
22889693 |
T |
 |
| Q |
101 |
cagctgtaccatcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaa |
200 |
Q |
| |
|
|||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22889694 |
cagcaataccatcaagatataaatgtgatgattggaatccattatat------atgaaactgttgtcttcacttgcaaccaatgtaacatgaaaaaacaa |
22889787 |
T |
 |
| Q |
201 |
catgaacacaagtttgatgaacatgattatagtttgtgaataa |
243 |
Q |
| |
|
|||||||||| || ||| |||||||||||||| |||||||||| |
|
|
| T |
22889788 |
catgaacacatgtctgaggaacatgattataggttgtgaataa |
22889830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 22858732 - 22858994
Alignment:
| Q |
12 |
tttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactcagctgtacca |
111 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||| || | || || ||||||||| |||||||||||||||| |||| ||||||||||| ||||| |
|
|
| T |
22858732 |
tttgaaaactataggatttggatagaaagcatgtgctgtatcttgcccgatatcattggtgagtcttagtaagccagttgaagttaactcagcaatacca |
22858831 |
T |
 |
| Q |
112 |
tcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaa |
211 |
Q |
| |
|
||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||| | ||||| || |||| |
|
|
| T |
22858832 |
tcaagatataaatgtgatgattggaatcc------tttatagatgaaaccgttgtcttcacttgctaccaatgtaacaagcaaacataacataaagacaa |
22858925 |
T |
 |
| Q |
212 |
gtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattattt |
280 |
Q |
| |
|
|||| |||||||||| |||||||||||| || |||||| |||||||||||| ||||||| |||||| |
|
|
| T |
22858926 |
acttgaggaacatgattttagtttgtgaatgaacaatgcttgtgtagttctgttcggtgtttgttattt |
22858994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 22880867 - 22881076
Alignment:
| Q |
2 |
tggaagggtgtttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactc |
101 |
Q |
| |
|
|||||| || ||||||||| |||||||||||||||||||| | |||||| | || ||| ||||||| |||||||||||||||||||||| ||| || |
|
|
| T |
22880867 |
tggaagtgtttttgaaaactataggatttggatagaaagcatatcctttggctctttctgtgtcattggtgagtcttagtaagccatttgagtttacctt |
22880966 |
T |
 |
| Q |
102 |
agctgtaccatcaagatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaac |
201 |
Q |
| |
|
||| |||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
22880967 |
agcaataccatcaagatataaatgtgatgaatggaatccattgtatttatagatgaaactgttttcttcacttgctatcaatgtaacaagaaaaaacaac |
22881066 |
T |
 |
| Q |
202 |
atgaacacaa |
211 |
Q |
| |
|
|| ||||||| |
|
|
| T |
22881067 |
ataaacacaa |
22881076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 280
Target Start/End: Original strand, 22894261 - 22894518
Alignment:
| Q |
16 |
aaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactcagctgtaccatcaa |
115 |
Q |
| |
|
||||| ||||| |||||||||||||| ||| ||||||| ||||| || ||||||| |||||||||||||||||| |||||||| | ||| ||||||||| |
|
|
| T |
22894261 |
aaaactatagggtttggatagaaagcatgtgctttttcttgtttggtgtcattggtgagtcttagtaagccattggaggttaaattagcaataccatcaa |
22894360 |
T |
 |
| Q |
116 |
gatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaagttt |
215 |
Q |
| |
|
|||| || | ||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||| | |
|
|
| T |
22894361 |
gatacaaatgagatgattggaaatcattat------agatgaaacttttgtcttcacttggtaccaatgtaacaagaaaaaacaacataaacacaagcct |
22894454 |
T |
 |
| Q |
216 |
gatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattattt |
280 |
Q |
| |
|
|| ||||||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||||| |
|
|
| T |
22894455 |
gaggaacatgattatagtttgtgaat-aataatgcttatacagttctgttcagtgtttattattt |
22894518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 280
Target Start/End: Original strand, 22873588 - 22873720
Alignment:
| Q |
147 |
tttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaagtttgatgaacatgattatagtttgtgaataaatg |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||| |||||| ||| |||||||||||| | |||||||| ||| |
|
|
| T |
22873588 |
tttatagatgaaactgttgtcttcacttgctactaatgtaacaagataaaacaacatgagcacaagcctgaggaacatgattatggattgtgaat-aata |
22873686 |
T |
 |
| Q |
247 |
atgcttctgtagttctgtttggtgtttattattt |
280 |
Q |
| |
|
|||||| || |||||| || ||||||||||||| |
|
|
| T |
22873687 |
atgcttatgcagttctattcagtgtttattattt |
22873720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 22913982 - 22914116
Alignment:
| Q |
13 |
ttgaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactcagctgtaccat |
112 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || |||| ||| ||| |||||||| | ||||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
22913982 |
ttgaaaactatagggtttggatagaaagcatgacccttttgttgtcttgaatcattggttaatcttagtaaaccatttgaggttaattcagcaacaccat |
22914081 |
T |
 |
| Q |
113 |
caagatataagtttgatgattggaatccattatat |
147 |
Q |
| |
|
|||||||||| | |||||||| ||| ||||||||| |
|
|
| T |
22914082 |
caagatataaatgtgatgatttgaaaccattatat |
22914116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 22885988 - 22886055
Alignment:
| Q |
198 |
caacatgaacacaagtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtt |
265 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
22885988 |
caacatgaacacaagtctgaggaacatgattatagtttgagaatgaatcatgcttctgtagttctgtt |
22886055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 22885937 - 22885983
Alignment:
| Q |
109 |
ccatcaagatataagtttgatgattggaatccattatatttatagat |
155 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| | ||||||||||| |
|
|
| T |
22885937 |
ccatcaagatataaatgtgatgattggaatccactttatttatagat |
22885983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 21150398 - 21150139
Alignment:
| Q |
15 |
gaaaacaataggatttggatagaaagcttgtcctttttcatgttttgtatcattggagagtcttagtaagccatttgaggttaactcagctgtaccatca |
114 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||| ||||||| | ||||||| | | ||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
21150398 |
gaaaactataggatttggatagaaagcatgccctatttcatgatctgtatcactagtgagtcttagtaagccatttgaggttaactcagcaataccatca |
21150299 |
T |
 |
| Q |
115 |
agatataagtttgatgattggaatccattatatttatagatgaaactgttgtcttcacttgctaccaatgtaacatgaaaaaacaacatgaacacaagtt |
214 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||| |||||||| | |
|
|
| T |
21150298 |
agatataaatgtgatgattggaatccattata------gatgaaactgttatcttcacttgctaccaatgtaacaagattaaacaacataaacacaagct |
21150205 |
T |
 |
| Q |
215 |
tgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattattt |
280 |
Q |
| |
|
||| ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |
|
|
| T |
21150204 |
tgaggaacatgattatagtttgtgaatgaacaatgcttctgtagttctgtttgatgtttattattt |
21150139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University