View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14193_high_16 (Length: 309)
Name: NF14193_high_16
Description: NF14193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14193_high_16 |
 | |
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| [»] chr5 (9 HSPs) |
| |
|
| [»] chr6 (2 HSPs) |
| |
|
| [»] chr4 (1 HSPs) |
| |
|
| [»] chr3 (1 HSPs) |
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| [»] chr2 (3 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 11 - 309
Target Start/End: Original strand, 34233010 - 34233308
Alignment:
| Q |
11 |
caaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatatagga |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
34233010 |
caaagggatcaatatgacattggtaaaaattccaataaactttgtaagtattgatttctcaagaaacaagtttaatggaggaattccaaatgatatagga |
34233109 |
T |
|
| Q |
111 |
gaacttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
34233110 |
gaacttcacgcactcaaagggcttaacctttcacataacagactcactggtcctattcctcaatccatacaaaacttgacaaacttggaatcgttggatc |
34233209 |
T |
|
| Q |
211 |
tctcgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34233210 |
tctcgtcaaatatgctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
34233308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 36 - 309
Target Start/End: Original strand, 34240808 - 34241081
Alignment:
| Q |
36 |
aaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggagaacttcacgcactcaaagggctta |
135 |
Q |
| |
|
|||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
34240808 |
aaaattccaacaatgtttgtaagtattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggagaacttcacgcactcaaagggctta |
34240907 |
T |
|
| Q |
136 |
acctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctctcgtcaaatattctcactggtat |
235 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
34240908 |
acctttcacataacagactcactggtcctattcctcaatccatacaaaacttgacaaacttggaatcgttggatctctcgtcaaatatgctcactggtat |
34241007 |
T |
|
| Q |
236 |
gattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34241008 |
gattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
34241081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 42117604 - 42117311
Alignment:
| Q |
12 |
aaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggag |
111 |
Q |
| |
|
||||||| ||| ||||||||||| |||||||||| | ||||||| ||||||||| |||| |||||| ||| | |||| |||||||||| ||| |||| |
|
|
| T |
42117604 |
aaagggagcaaaatgacattggtgaaaattccaaacatttttgtaattattgatttgtcaaaaaacaaatttgagggagagattccaaatgctattggag |
42117505 |
T |
|
| Q |
112 |
aacttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatct |
211 |
Q |
| |
|
| || || ||||||||||||||||||||||| ||||||||||| || |||| |||||| ||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
42117504 |
acctccatgcactcaaagggcttaacctttcccataacagactcaccggtcatattcccaaatccatgggaaacttgtcaaacttggaatcattggatct |
42117405 |
T |
|
| Q |
212 |
ctcgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtggga |
305 |
Q |
| |
|
|||||||||||| || || |||||||| |||||||||||||||||||| || |||| |||||||| ||||||||||||||||||| |||||| |
|
|
| T |
42117404 |
ctcgtcaaatatgcttaccggtatgatccctgcagaattaaccaatttagactttcttcaagtcttgaatctttccaataaccatctagtggga |
42117311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 309
Target Start/End: Original strand, 41713800 - 41714073
Alignment:
| Q |
36 |
aaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggagaacttcacgcactcaaagggctta |
135 |
Q |
| |
|
|||||||||| || ||||| || ||||||||| |||||||| || ||| |||| | |||||| ||| ||| ||||| ||||| | ||||||||||||| |
|
|
| T |
41713800 |
aaaattccaaaaatctttgcaagtattgatttttcaagaaataaatttgatggggagattccagatgttattggagagcttcatgatctcaaagggctta |
41713899 |
T |
|
| Q |
136 |
acctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctctcgtcaaatattctcactggtat |
235 |
Q |
| |
|
|||||||| |||||| ||| ||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
41713900 |
acctttcatataacaaactcactggtcacattccccaatccatgggaaacttgataaacttggaatcattggatctctcgtcaaatatgctcactggtcg |
41713999 |
T |
|
| Q |
236 |
gattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
|||||||| | | |||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
41714000 |
gattcctgtaaagttaaccaatttggactttcttgaagtcttggatctttctaataaccatcttgtgggagaaa |
41714073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 309
Target Start/End: Complemental strand, 42123328 - 42123055
Alignment:
| Q |
36 |
aaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggagaacttcacgcactcaaagggctta |
135 |
Q |
| |
|
|||||||||| ||| ||||||| ||||||| | ||||||||||| ||| | |||| |||||||||| ||| ||| | || || ||||||| |||||||| |
|
|
| T |
42123328 |
aaaattccaaaaaagtttgtaagtattgatatgtcaagaaacaaatttgaaggagagattccaaatgctattggaaagctacatgcactcatagggctta |
42123229 |
T |
|
| Q |
136 |
acctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctctcgtcaaatattctcactggtat |
235 |
Q |
| |
|
||||||| ||||||||||| | |||||||||||| ||||| || | ||||| |||||||||||| ||||||||||| |||||||| ||||||| | | |
|
|
| T |
42123228 |
acctttcccataacagactcaatggtcctattccccaatcaattggatacttgtcaaacttggaatggttggatctctcatcaaatatgctcactgatgt |
42123129 |
T |
|
| Q |
236 |
gattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||||||||| ||| |||| |||||||||||||||||||||| |
|
|
| T |
42123128 |
gattcctgcagaactaaccaatttgggctttcttgaagtcttagatatttcaaataaccatcttgtgggagaaa |
42123055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 309
Target Start/End: Complemental strand, 42128746 - 42128449
Alignment:
| Q |
12 |
aaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggag |
111 |
Q |
| |
|
||||||| ||| | ||||||||| |||||||||| | |||||||| ||||||||| ||||||||||| ||| | |||| |||||||||||| | || | |
|
|
| T |
42128746 |
aaagggaacaaaaggacattggtgaaaattccaaatatctttgtaattattgatttgtcaagaaacaaatttgaaggagatattccaaatgattttggtg |
42128647 |
T |
|
| Q |
112 |
aacttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatct |
211 |
Q |
| |
|
| ||||| ||||| | ||| || |||||||| ||||||| ||| | ||| |||||||| ||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
42128646 |
agcttcatgcactaataggactcaacctttcccataacaaactcattggccctattccaaaatccatgggaaacttgacaaacttggaatggttggatct |
42128547 |
T |
|
| Q |
212 |
ctcgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
||| |||||| | ||||||| | |||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
42128546 |
ctcatcaaatgtgctcactgatgtgattcctgcagaattaagcaatttgggttttcttgaagtcttagatctttcaaataaccatctagtgggagaaa |
42128449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 114 - 309
Target Start/End: Original strand, 41572339 - 41572534
Alignment:
| Q |
114 |
cttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctct |
213 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||| || |||||||||||||||||| || ||||||| ||||| |||||||||||||||| | |
|
|
| T |
41572339 |
cttcactcactcaaagggcttaacctttcccataacagactcaccggtcctattcctcaatccgtaggaaacttgtcaaacatggaatcattggatcttt |
41572438 |
T |
|
| Q |
214 |
cgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
|||||||||| ||||||||| | |||||| ||||||||| |||| ||||| || ||| ||| ||| ||||||| |||||||||| |||||||||| |
|
|
| T |
41572439 |
cgtcaaatatactcactggtgtaattccttcagaattaatcaatctgaacggtattggagtattgaatctttctcataaccatctagtgggagaaa |
41572534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 114 - 309
Target Start/End: Original strand, 41617978 - 41618173
Alignment:
| Q |
114 |
cttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctct |
213 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||| || |||||||||||||||||| || ||||||| ||||| |||||||||||||||| | |
|
|
| T |
41617978 |
cttcactcactcaaagggcttaacctttcccataacagactcaccggtcctattcctcaatccgtaggaaacttgtcaaacatggaatcattggatcttt |
41618077 |
T |
|
| Q |
214 |
cgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
|||||||||| ||||||||| | |||||| ||||||||| |||| ||||| || ||| ||| ||| ||||||| |||||||||| |||||||||| |
|
|
| T |
41618078 |
cgtcaaatatactcactggtgtaattccttcagaattaatcaatctgaacggtattggagtattgaatctttctcataaccatctagtgggagaaa |
41618173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 259
Target Start/End: Complemental strand, 41444179 - 41443970
Alignment:
| Q |
50 |
ctttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggagaacttcacgcactcaaagggcttaacctttcacataac |
149 |
Q |
| |
|
|||||||| ||||||||| ||| ||||||| ||| | |||| |||||||||| ||| || || ||||| ||| ||| ||| || |||||||| || || |
|
|
| T |
41444179 |
ctttgtaagtattgatttttcaggaaacaaatttgaaggagacattccaaatgttattggtgagcttcatgcaatcataggactcaacctttcccacaat |
41444080 |
T |
|
| Q |
150 |
agactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctctcgtcaaatattctcactggtatgattcctgcagaat |
249 |
Q |
| |
|
| ||| |||||| | |||||||||||| | ||| |||| |||| | |||||| |||||||||| |||||||| |||||||||| ||||||| |||| | |
|
|
| T |
41444079 |
aaacttactggtgcgattcctcaatcctttggaaatttgataaacatcgaatcaatggatctctcctcaaatatgctcactggtaggattcctacagagt |
41443980 |
T |
|
| Q |
250 |
taaccaattt |
259 |
Q |
| |
|
|||||||||| |
|
|
| T |
41443979 |
taaccaattt |
41443970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 309
Target Start/End: Original strand, 25523264 - 25523549
Alignment:
| Q |
24 |
atgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggagaacttcacgcac |
123 |
Q |
| |
|
|||| |||||| |||||||||||||| |||||| |||||||||| ||||||||||| ||| | |||| |||||||||| ||| ||||| ||||| |||| |
|
|
| T |
25523264 |
atgaaattggtgaaaattccaataaagtttgtatctattgatttttcaagaaacaaatttgaaggagagattccaaatgctattggagagcttcatgcac |
25523363 |
T |
|
| Q |
124 |
tcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctctcgtcaaatat |
223 |
Q |
| |
|
||||||||||||||||||| || |||||||| || |||| |||||| |||||||| |||||||||| |||||||||| ||||||| || ||||| |
|
|
| T |
25523364 |
tcaaagggcttaacctttcccacaacagacttaccggtcatattcccaaatccataggaaacttgacatacttggaatctctggatctttccctgaatat |
25523463 |
T |
|
| Q |
224 |
tctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
| || ||| |||||||||| |||||||||||||| ||| |||||||||| || ||||||||||||||||| | |||||||||| |
|
|
| T |
25523464 |
gttaaccggtgtgattcctgcggaattaaccaatttaaactttcttgaagtcatgaatctttccaataaccatttggtgggagaaa |
25523549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 12 - 278
Target Start/End: Complemental strand, 24140702 - 24140436
Alignment:
| Q |
12 |
aaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggag |
111 |
Q |
| |
|
||||||| ||| |||||| |||| |||||||||| ||| ||||||| ||| ||| | ||||||||||| ||| | |||| |||||||||| ||| |||| |
|
|
| T |
24140702 |
aaagggaccaaaatgacactggtgaaaattccaaaaaagtttgtaagtatcgatatgtcaagaaacaaatttgaaggagagattccaaatgctatcggag |
24140603 |
T |
|
| Q |
112 |
aacttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatct |
211 |
Q |
| |
|
| ||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||||| |||||||| ||| |||||| |||||||||| ||| |||| |
|
|
| T |
24140602 |
agcttcatgcactcaaagggattaacctttcccataacagacttactggtcatattccccaatccatcggaaagttgacatacttggaatctttgaatct |
24140503 |
T |
|
| Q |
212 |
ctcgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttg |
278 |
Q |
| |
|
|| |||||||| | || || |||||||| | |||||||||||| |||||||||||||||||||| |
|
|
| T |
24140502 |
ttcatcaaatatgttaaccggcgtgattccttcggaattaaccaatatgaacagtcttgaagtcttg |
24140436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 309
Target Start/End: Complemental strand, 11118015 - 11117718
Alignment:
| Q |
12 |
aaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggag |
111 |
Q |
| |
|
||||||| ||| |||||| |||| |||||||||||||| || |||| ||||||||| ||||||||||| ||| | |||| ||| |||||| ||| |||| |
|
|
| T |
11118015 |
aaagggaacaaaatgacactggtgaaaattccaataaagttagtaagtattgatttgtcaagaaacaaatttgaaggagagattacaaatgctattggag |
11117916 |
T |
|
| Q |
112 |
aacttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatct |
211 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||| | ||||||||| ||||||| |||||| | |||||| ||||||| || |||||||||| |||||||| |
|
|
| T |
11117915 |
agcttcatgcactcaaagggcttaatctttcccgtaacagacttactggtcatattcccaactccataggaaacttggcatacttggaatctttggatct |
11117816 |
T |
|
| Q |
212 |
ctcgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
|| |||||||| | || || |||||||||||||||||||||||||| | |||||||||||| ||| |||| ||||||||||| |||||||||| |
|
|
| T |
11117815 |
ttcatcaaatatgttaaccagtgtgattcctgcagaattaaccaatttgggctttcttgaagtcttagatatttcaaataaccatctagtgggagaaa |
11117718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 309
Target Start/End: Complemental strand, 8522951 - 8522678
Alignment:
| Q |
36 |
aaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggagaacttcacgcactcaaagggctta |
135 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| ||||||||||| ||| | || | |||||||| ||| || || ||||| ||| ||| |||||||| |
|
|
| T |
8522951 |
aaaattccaaacaactttgtaattattgatttgtcaagaaacaaatttgaaggcgagattccaaagattattggtgagcttcatgcaatcatagggctta |
8522852 |
T |
|
| Q |
136 |
acctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatctctcgtcaaatattctcactggtat |
235 |
Q |
| |
|
||||||| ||||||||||| || |||| |||||| |||||||| |||||||||| |||||||||| |||||||| || |||||||| | || | | | |
|
|
| T |
8522851 |
acctttcccataacagacttacaggtcatattcccaaatccataggaaacttgacatacttggaatctttggatctttcctcaaatatgttaaccgatgt |
8522752 |
T |
|
| Q |
236 |
gattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
||||||| |||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
8522751 |
gattcctttggaattaaccaatcttaacagtcttgaagtcttggatctttccaataatcgtcttgtgggagaaa |
8522678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 309
Target Start/End: Original strand, 11994618 - 11994915
Alignment:
| Q |
12 |
aaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggag |
111 |
Q |
| |
|
||||||| ||| ||||||| ||| |||||||||| | ||| |||| ||||||||| ||||||||||| ||| | |||| |||||||||| ||| | | |
|
|
| T |
11994618 |
aaagggaacaaaatgacatgggttaaaattccaaacatcttagtaattattgatttgtcaagaaacaaatttgaaggagagattccaaatgttattgatg |
11994717 |
T |
|
| Q |
112 |
aacttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatct |
211 |
Q |
| |
|
| ||||| ||||| | ||||||||||||||| ||||||||||| | |||||||||||| ||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
11994718 |
agcttcaagcacttatagggcttaacctttcccataacagactcattggtcctattcccaaatccatgggaaacttgacaaacttggaatggctggatct |
11994817 |
T |
|
| Q |
212 |
ctcgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
||| |||||||| ||||||| | ||||||| ||| |||||||||||||| | ||||| ||| || || |||||||||||||||| |||||||||| |
|
|
| T |
11994818 |
ctcatcaaatatgctcactgatgtgattccagcaaaattaaccaatttgggctttcttgcagttttagacttttccaataaccatctagtgggagaaa |
11994915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 309
Target Start/End: Complemental strand, 12248311 - 12248014
Alignment:
| Q |
12 |
aaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggag |
111 |
Q |
| |
|
||||||| ||| ||||||| ||| |||||||||| | ||| |||| ||||||||| ||||||||||| ||| | |||| |||||||||| ||| | | |
|
|
| T |
12248311 |
aaagggaacaaaatgacatgggttaaaattccaaacatcttagtaattattgatttgtcaagaaacaaatttgaaggagagattccaaatgttattgatg |
12248212 |
T |
|
| Q |
112 |
aacttcacgcactcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccatactaaacttgacaaacttggaatcattggatct |
211 |
Q |
| |
|
| ||||| ||||| | ||||||||||||||| ||||||||||| | |||||||||||| ||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
12248211 |
agcttcaagcacttatagggcttaacctttcccataacagactcattggtcctattcccaaatccatgggaaacttgacaaacttggaatggctggatct |
12248112 |
T |
|
| Q |
212 |
ctcgtcaaatattctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttccaataaccatcttgtgggagaaa |
309 |
Q |
| |
|
||| |||||||| ||||||| | ||||||| ||| |||||||||||||| | ||||| ||| || || |||||||||||||||| |||||||||| |
|
|
| T |
12248111 |
ctcatcaaatatgctcactgatgtgattccagcaaaattaaccaatttgggctttcttgcagttttagacttttccaataaccatctagtgggagaaa |
12248014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 178
Target Start/End: Original strand, 32682134 - 32682306
Alignment:
| Q |
12 |
aaagggatcaatatgacattggtaaaaattccaataaactttgtaactattgatttctcaagaaacaagtttaatggaggaattccaaatgatataggag |
111 |
Q |
| |
|
||||||| ||| |||||| | || |||||||||| ||||||||||| ||||||||| |||||||||| ||| | |||| |||||||||| ||| || | |
|
|
| T |
32682134 |
aaagggagcaaaatgacactagtgaaaattccaagaaactttgtaagtattgatttgtcaagaaacagatttgaaggagagattccaaatgctattgggg |
32682233 |
T |
|
| Q |
112 |
aacttcacgcac------tcaaagggcttaacctttcacataacagactaactggtcctattcctcaatccat |
178 |
Q |
| |
|
| ||||| |||| ||| ||||||||||||||| ||||||||||| || | || |||||| |||||||| |
|
|
| T |
32682234 |
agcttcatgcactcagaatcagagggcttaacctttcccataacagactcaccgatcatattccccaatccat |
32682306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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