View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14194_low_10 (Length: 416)
Name: NF14194_low_10
Description: NF14194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14194_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 13 - 401
Target Start/End: Original strand, 6059101 - 6059481
Alignment:
| Q |
13 |
aatattagaatcaatgcgtttaatatgttacatcccttacctggagctgcatctaacaattcttcaactcattcatatttgcttaggaattcatcacgat |
112 |
Q |
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| T |
6059101 |
aatattagaatcaatgcgtttaatatgttacatcccttacctggagctgcatctaacaattcttcaactcattcatatttgcttaggaattcatcacgat |
6059200 |
T |
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| Q |
113 |
tgtatagattcaaactctccatatagataatattatatatattcgatcaaagtagcattagaataaacccaatcaacttctgctcaagcatcttgataca |
212 |
Q |
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| T |
6059201 |
tgtgtagattcaaactctccatatagataatattatatatattcgatcaaagtagcattagaataaacccaatcaacttctgctcaagc------ataca |
6059294 |
T |
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| Q |
213 |
aacaagttacagcatattctcaaggataccaacctattcaattgagtagatacttcctgacattgtgcaacattattcaaatctgtcacttcccattaac |
312 |
Q |
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| T |
6059295 |
aacaagttacagc--attctcaaggataccaacctattcaattgagtagatacttcctgacattgtgcaacattattcaaatctgtcacttccccttaac |
6059392 |
T |
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| Q |
313 |
taaccgagttatcgttgctgaattaacacattatctcacacctcatcgaatgttgaggaccattacgatacaaatttaaacatatatat |
401 |
Q |
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| T |
6059393 |
taaccgagttatcgttgctgaattaacacattatctcacacctcatcgaatgttgaggaccattacgatacaaatttaaacatatatat |
6059481 |
T |
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