View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14194_low_11 (Length: 394)

Name: NF14194_low_11
Description: NF14194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14194_low_11
NF14194_low_11
[»] chr1 (33 HSPs)
chr1 (54-325)||(44303731-44304002)
chr1 (218-316)||(44318347-44318446)
chr1 (195-290)||(44195902-44195997)
chr1 (201-279)||(19920957-19921035)
chr1 (220-308)||(51847536-51847624)
chr1 (195-293)||(13360685-13360783)
chr1 (80-172)||(9595739-9595831)
chr1 (195-273)||(47905619-47905697)
chr1 (195-282)||(318239-318326)
chr1 (93-172)||(23079952-23080031)
chr1 (195-273)||(2925865-2925943)
chr1 (195-273)||(13061327-13061405)
chr1 (195-273)||(23871393-23871471)
chr1 (195-273)||(27500057-27500135)
chr1 (195-273)||(32299175-32299253)
chr1 (195-273)||(39889588-39889666)
chr1 (195-271)||(1523670-1523746)
chr1 (195-271)||(12293887-12293963)
chr1 (213-273)||(17688412-17688472)
chr1 (341-385)||(32511695-32511739)
chr1 (206-273)||(47206365-47206432)
chr1 (195-273)||(896425-896503)
chr1 (195-273)||(2175407-2175485)
chr1 (195-273)||(13255417-13255495)
chr1 (195-273)||(14153184-14153262)
chr1 (195-273)||(33991614-33991692)
chr1 (195-273)||(42488557-42488635)
chr1 (195-273)||(50402814-50402892)
chr1 (237-275)||(50566171-50566209)
chr1 (208-273)||(7964047-7964112)
chr1 (343-376)||(44303676-44303709)
chr1 (148-180)||(34154217-34154249)
chr1 (213-273)||(43571913-43571973)
[»] chr4 (31 HSPs)
chr4 (80-284)||(8828591-8828800)
chr4 (83-284)||(22845046-22845251)
chr4 (195-310)||(50333530-50333649)
chr4 (195-273)||(16878770-16878850)
chr4 (216-284)||(39192186-39192254)
chr4 (195-273)||(20534000-20534078)
chr4 (195-273)||(38317158-38317236)
chr4 (195-273)||(41844508-41844586)
chr4 (214-275)||(6973544-6973605)
chr4 (195-276)||(26593348-26593429)
chr4 (208-292)||(46176565-46176649)
chr4 (194-273)||(3126941-3127020)
chr4 (195-273)||(7182121-7182199)
chr4 (195-273)||(17873269-17873347)
chr4 (195-273)||(31530092-31530170)
chr4 (195-273)||(32060719-32060797)
chr4 (195-273)||(37756653-37756731)
chr4 (195-273)||(41363742-41363820)
chr4 (195-273)||(47669883-47669961)
chr4 (195-273)||(52594556-52594634)
chr4 (213-304)||(19154082-19154167)
chr4 (250-310)||(45899420-45899480)
chr4 (241-276)||(47687645-47687680)
chr4 (195-273)||(23708209-23708287)
chr4 (195-273)||(24291458-24291536)
chr4 (214-284)||(26702639-26702709)
chr4 (120-174)||(46176685-46176739)
chr4 (195-273)||(48830744-48830822)
chr4 (195-273)||(49404553-49404631)
chr4 (213-273)||(13270026-13270086)
chr4 (205-273)||(32948467-32948534)
[»] chr5 (16 HSPs)
chr5 (135-310)||(12229341-12229518)
chr5 (91-183)||(19386239-19386330)
chr5 (213-281)||(28435014-28435082)
chr5 (213-292)||(31849205-31849284)
chr5 (201-290)||(20500942-20501031)
chr5 (195-275)||(4648917-4648997)
chr5 (243-291)||(19386531-19386578)
chr5 (205-273)||(25598709-25598777)
chr5 (207-273)||(17092970-17093036)
chr5 (195-273)||(27480102-27480180)
chr5 (195-273)||(38302288-38302366)
chr5 (122-175)||(31323272-31323325)
chr5 (122-175)||(31370911-31370964)
chr5 (126-175)||(31849106-31849155)
chr5 (213-273)||(10295556-10295616)
chr5 (341-385)||(38568453-38568497)
[»] chr7 (17 HSPs)
chr7 (195-281)||(19679261-19679347)
chr7 (213-292)||(38353041-38353120)
chr7 (195-273)||(42620282-42620360)
chr7 (85-173)||(20513485-20513574)
chr7 (195-273)||(5967983-5968061)
chr7 (195-269)||(33113569-33113643)
chr7 (195-273)||(38235867-38235945)
chr7 (195-273)||(43188930-43189008)
chr7 (195-273)||(47275932-47276010)
chr7 (195-275)||(33810142-33810222)
chr7 (195-271)||(43778505-43778581)
chr7 (194-273)||(41002180-41002259)
chr7 (220-282)||(4178273-4178335)
chr7 (195-273)||(28437472-28437550)
chr7 (195-273)||(33406562-33406640)
chr7 (205-273)||(36747368-36747437)
chr7 (195-271)||(44720156-44720232)
[»] chr3 (23 HSPs)
chr3 (215-308)||(51936252-51936345)
chr3 (195-275)||(25428739-25428819)
chr3 (195-273)||(38526226-38526304)
chr3 (213-282)||(44979461-44979530)
chr3 (195-273)||(2420732-2420810)
chr3 (195-273)||(7661109-7661187)
chr3 (195-273)||(30131816-30131894)
chr3 (195-273)||(38593025-38593103)
chr3 (195-273)||(41961907-41961985)
chr3 (195-273)||(43007452-43007530)
chr3 (195-273)||(47789376-47789454)
chr3 (200-273)||(39499271-39499344)
chr3 (194-271)||(55439659-55439736)
chr3 (205-273)||(47714613-47714681)
chr3 (200-275)||(38515308-38515383)
chr3 (195-273)||(30121452-30121530)
chr3 (195-273)||(43237363-43237441)
chr3 (128-178)||(44979555-44979605)
chr3 (195-273)||(46017278-46017356)
chr3 (195-273)||(49860909-49860987)
chr3 (195-275)||(17642660-17642740)
chr3 (195-275)||(23163594-23163674)
chr3 (89-168)||(28993122-28993201)
[»] chr2 (26 HSPs)
chr2 (213-290)||(25463693-25463770)
chr2 (213-292)||(12940376-12940455)
chr2 (195-273)||(3038877-3038955)
chr2 (195-273)||(4042037-4042115)
chr2 (195-273)||(8410860-8410938)
chr2 (195-273)||(8555706-8555784)
chr2 (195-273)||(13765869-13765947)
chr2 (195-273)||(36567208-36567286)
chr2 (195-273)||(40357530-40357608)
chr2 (195-292)||(26051921-26052018)
chr2 (200-273)||(31899291-31899364)
chr2 (205-273)||(3119792-3119860)
chr2 (205-273)||(18826166-18826234)
chr2 (195-275)||(38023377-38023457)
chr2 (195-275)||(44020410-44020490)
chr2 (195-273)||(32243547-32243626)
chr2 (239-308)||(2057395-2057465)
chr2 (195-269)||(8990893-8990967)
chr2 (195-273)||(31550192-31550270)
chr2 (195-273)||(38293961-38294039)
chr2 (341-385)||(5321814-5321858)
chr2 (213-273)||(12963919-12963979)
chr2 (195-271)||(14008259-14008335)
chr2 (135-175)||(25463613-25463653)
chr2 (85-172)||(42644822-42644910)
chr2 (205-273)||(44137208-44137276)
[»] scaffold1562 (1 HSPs)
scaffold1562 (195-275)||(211-291)
[»] scaffold1158 (1 HSPs)
scaffold1158 (195-275)||(2302-2382)
[»] chr8 (11 HSPs)
chr8 (213-276)||(8950394-8950458)
chr8 (195-273)||(34349788-34349866)
chr8 (203-273)||(1941991-1942061)
chr8 (195-273)||(3404504-3404582)
chr8 (195-273)||(34272588-34272666)
chr8 (195-273)||(36102820-36102898)
chr8 (195-273)||(36906260-36906338)
chr8 (195-275)||(37659461-37659541)
chr8 (194-273)||(2474696-2474775)
chr8 (194-273)||(25033453-25033532)
chr8 (195-273)||(13865022-13865100)
[»] chr6 (10 HSPs)
chr6 (206-278)||(24801809-24801881)
chr6 (195-273)||(23095058-23095136)
chr6 (206-310)||(6026208-6026311)
chr6 (195-273)||(24734953-24735031)
chr6 (195-273)||(26574325-26574403)
chr6 (195-273)||(34914700-34914778)
chr6 (195-273)||(1029366-1029444)
chr6 (195-273)||(5825405-5825483)
chr6 (195-273)||(26481061-26481139)
chr6 (195-273)||(29241763-29241841)
[»] scaffold0026 (1 HSPs)
scaffold0026 (213-276)||(74648-74709)
[»] scaffold0717 (1 HSPs)
scaffold0717 (195-273)||(1651-1729)
[»] scaffold0028 (1 HSPs)
scaffold0028 (195-273)||(35385-35463)
[»] scaffold0952 (1 HSPs)
scaffold0952 (195-273)||(3600-3678)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 54 - 325
Target Start/End: Complemental strand, 44304002 - 44303731
Alignment:
Q  54 tatgttagaaaacaagttcagggtagaaaacttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaa 153  Q
    |||||| ||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44304002 tatgtttgaaaacaagtttaggatagaaaacttaggctttatttaggagtttggaggaaaagagaagggagtgttttggaaggatgatattagaagaaaa 44303903  T
Q  154 aatagataaatctttcaaaaaatttaagtgnnnnnnnagttaatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaata 253  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44303902 aatagataaatctttcaaaaaatttaagtgtttttctagttaatgttaaaataatattaatgattaatgtacttttaatttagcgagtattataacaata 44303803  T
Q  254 tatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaatttctagtttcccaaatt 325  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44303802 tatattggatttgaaaaatttacccaaaccccgaaaaacgtttctccaatacaatttctagtttcccaaatt 44303731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 44318446 - 44318347
Alignment:
Q  218 taatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaa-cccccaaaaacgtttctccaatacaatttctagtt 316  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||| |||||||||| |||||    
T  44318446 taatgtacttttaattttgcgagtataataacaatatatattggatttgaaaaatttatccaaatccccccaaaacgttcctctaatacaatttttagtt 44318347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 44195997 - 44195902
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaa 290  Q
    |||| ||||| |||||| | |||||||||||||| ||||| | || |||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  44195997 aatgataaaagaatacttacgattaatgtactttcaattttgtgaatattatcacaatatatattggatttgaaaaatttacccaaatctccaaaa 44195902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 19921035 - 19920957
Alignment:
Q  201 aaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttaccca 279  Q
    |||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||||| |||||| |||||    
T  19921035 aaaagaatactaatcattaatgtacttttaattttgtgagtattataacaatatatatttgatttggaaaattcaccca 19920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 51847536 - 51847624
Alignment:
Q  220 atgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaat 308  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||||||||||  |||||| || |||||  || |||||||||||    
T  51847536 atgtacttttaattttgcaaatattataacaatatatattggatttgaaaaatttattcaaacctcccaaaactcttatccaatacaat 51847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 293
Target Start/End: Original strand, 13360685 - 13360783
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacg 293  Q
    |||| ||||| ||||||  | ||| ||||| ||||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||    
T  13360685 aatgataaaagaatacttttaattgatgtatttttaattttgcaagtattatagcaatatatattggatttaaaaaatttacccaaaccctccaaaacg 13360783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 9595831 - 9595739
Alignment:
Q  80 aaaacttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaa 172  Q
    |||||| ||||||||||| |||||||| |||  ||| || ||||| |||||||| |||||| ||||||  |||||||||| ||||||||||||    
T  9595831 aaaactaaggctttgtttgggagtttggaggggaagggaggggagggttttggagggatgagattagagaaaaaaatagagaaatctttcaaa 9595739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 47905619 - 47905697
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||||||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47905619 aatgataaactaatactaatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47905697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 318239 - 318326
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaac 282  Q
    |||| ||||| |||| | ||| |||||| ||||||||||| | ||||||||||||||||||||||  ||||  |||||||||| ||||    
T  318239 aatgataaaagaatatttatgcttaatgcacttttaattttgtgagtattataacaatatatattaaattttgaaaatttacctaaac 318326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 23080031 - 23079952
Alignment:
Q  93 tgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaa 172  Q
    ||||| |||||||| || | ||| ||| |||| |||||||| ||||||||||||| ||||||||||| |||| |||||||    
T  23080031 tgtttgggagtttggagaagaagggaatggagggttttggagggatgatattagaggaaaaaatagaaaaatatttcaaa 23079952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 2925865 - 2925943
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||  ||||||||||||    
T  2925865 aatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattaaatttgaaaaatt 2925943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 13061327 - 13061405
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  13061327 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 13061405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 23871393 - 23871471
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  23871393 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 23871471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 27500135 - 27500057
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  27500135 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 27500057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 32299253 - 32299175
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  32299253 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 32299175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 39889588 - 39889666
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  39889588 aatgataaactaatacttatgattaatatacttttaattttatgaatattataacaacatagattgaatttgaaaaatt 39889666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 1523746 - 1523670
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 271  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||    
T  1523746 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaa 1523670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 12293963 - 12293887
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 271  Q
    |||| |||| ||||||| || |||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||    
T  12293963 aatgataaactaatacttattattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaa 12293887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 17688472 - 17688412
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  17688472 atgattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 17688412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 32511695 - 32511739
Alignment:
Q  341 attatgaagaaaagtaaaccccttatagccctcccctcccctccc 385  Q
    ||||||||||||||| |||||| || |||||||||||||||||||    
T  32511695 attatgaagaaaagttaaccccctaaagccctcccctcccctccc 32511739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 47206365 - 47206432
Alignment:
Q  206 aatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47206365 aatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47206432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 896425 - 896503
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| || |||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  896425 aatggtaaactaatacttataattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 896503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 2175485 - 2175407
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  2175485 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 2175407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 13255495 - 13255417
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||| ||||   || ||||||||||| ||| |||| ||||||||||||    
T  13255495 aatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagattgaatttgaaaaatt 13255417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 14153262 - 14153184
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  14153262 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 14153184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 33991692 - 33991614
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| ||| ||||| |||||||    
T  33991692 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatttgatttaaaaaatt 33991614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 42488557 - 42488635
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||| ||||   || ||||||||||| ||| |||| ||||||||||||    
T  42488557 aatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagattgaatttgaaaaatt 42488635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 50402892 - 50402814
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| || |||||||||    | ||||||||||| ||| |||||||||||||||||    
T  50402892 aatgataaactaatacttatgattaatatatttttaattttaaaaatattataacaacatagattggatttgaaaaatt 50402814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 275
Target Start/End: Original strand, 50566171 - 50566209
Alignment:
Q  237 cgagtattataacaatatatattggatttgaaaaattta 275  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  50566171 cgagtattataactatgtatattggatttgaaaaattta 50566209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 7964112 - 7964047
Alignment:
Q  208 tactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  7964112 tacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 7964047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 44303709 - 44303676
Alignment:
Q  343 tatgaagaaaagtaaaccccttatagccctcccc 376  Q
    ||||||||||||||||||||||| ||||||||||    
T  44303709 tatgaagaaaagtaaaccccttaaagccctcccc 44303676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 34154217 - 34154249
Alignment:
Q  148 agaaaaaatagataaatctttcaaaaaatttaa 180  Q
    |||||||||||| ||||||||||||||||||||    
T  34154217 agaaaaaatagagaaatctttcaaaaaatttaa 34154249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 43571913 - 43571973
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  43571913 atgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 43571973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 284
Target Start/End: Complemental strand, 8828800 - 8828591
Alignment:
Q  80 aaaacttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaag-aaaaaatagataaatctttcaaaaaattt 178  Q
    |||||||||| |||||||||||||||| |||| ||| ||||||||  ||||| | |||||| |||||| | |||||||||| ||||||||||||   |||    
T  8828800 aaaacttaggttttgtttaggagtttggaggagaagcgaagggaggattttgaagggatgagattagagggaaaaaatagagaaatctttcaaacttttt 8828701  T
Q  179 aag----tgnnnnnnnagttaatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattt 274  Q
    |||    ||       ||| |||| ||||| || ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||    
T  8828700 aagagtgtgtttttctagtgaatgataaaagaacacttatggttaatgtacttttaattttccgagtattataacaatatatattggattttgaaaattt 8828601  T
Q  275 acccaaaccc 284  Q
    ||||||||||    
T  8828600 acccaaaccc 8828591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 284
Target Start/End: Original strand, 22845046 - 22845251
Alignment:
Q  83 acttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaatttaagt 182  Q
    ||||||||||||||| |||||||| |||  ||| || ||||| | |||||| |||||| |||||| ||||||||| | ||||||||||||||| || |||    
T  22845046 acttaggctttgtttgggagtttggaggggaagggaggggagggctttggagggatgagattagaggaaaaaataaagaaatctttcaaaaaaattgagt 22845145  T
Q  183 gnnnnnnn----agttaatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttaccc 278  Q
    |           ||| |||| ||||| |||||  ||| ||||| ||||||||||||  | ||| |||||||||||||||||||||||| ||||||||||     
T  22845146 gtgtgtttttctagtgaatgataaaagaatacgtatggttaatatacttttaattttccaagtgttataacaatatatattggatttggaaaatttacca 22845245  T
Q  279 aaaccc 284  Q
    ||||||    
T  22845246 aaaccc 22845251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 310
Target Start/End: Original strand, 50333530 - 50333649
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataaca----atatatattggatttgaaaaatttacccaaacccccaaaa 290  Q
    |||| ||||| | |||| |||||||||| ||||||||||| | |||||||||||||    |||||||||||||||| ||||||||||||||||||  |||    
T  50333530 aatgataaaagattacttatgattaatgcacttttaattttgtgagtattataacaatatatatatattggatttggaaaatttacccaaacccctcaaa 50333629  T
Q  291 acgtttctccaatacaattt 310  Q
    ||  | ||||| ||||||||    
T  50333630 accctcctccattacaattt 50333649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 16878850 - 16878770
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcg--agtattataacaatatatattggatttgaaaaatt 273  Q
    |||| ||||| |||||| ||||||||| || ||||||||| |||  |||||||||||||||||||||||||||| ||||||    
T  16878850 aatgataaaagaatacttatgattaatatatttttaattttgcgtgagtattataacaatatatattggatttggaaaatt 16878770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 39192186 - 39192254
Alignment:
Q  216 attaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaaccc 284  Q
    |||||| |||||||| ||  | ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  39192186 attaatatacttttacttctgtgagtattataacaatatatattggatttggaaaatttactcaaaccc 39192254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 20534078 - 20534000
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||  |||||||||||||  || ||||||||||| ||| |||||||||||||||||    
T  20534078 aatgataaactaatacttatgattaacatacttttaatttaaagaatattataacaacatagattggatttgaaaaatt 20534000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 38317158 - 38317236
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||    
T  38317158 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattggatttgaaaaatt 38317236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 41844586 - 41844508
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||    
T  41844586 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaagatagattggatttgaaaaatt 41844508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 6973544 - 6973605
Alignment:
Q  214 tgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    ||||||||||| ||||||||| || ||||||||||||||||| |  ||||||||||||||||    
T  6973544 tgattaatgtatttttaattttgcaagtattataacaatatagaccggatttgaaaaattta 6973605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 26593348 - 26593429
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttac 276  Q
    |||| ||||| ||||||  | |||||| |||||||||||| |||||||| |||||||||||||||| ||||| |||| ||||    
T  26593348 aatgataaaagaatacttttaattaatatacttttaattttgcgagtatcataacaatatatattgtatttggaaaacttac 26593429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 46176649 - 46176565
Alignment:
Q  208 tactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 292  Q
    |||| |||||||||||| |||||| || |  ||||||||||||||||| ||| ||||||||||| | ||||||| |||| |||||    
T  46176649 tacttatgattaatgtatttttaactttgaaagtattataacaatatagattagatttgaaaaactcacccaaatcccccaaaac 46176565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 3126941 - 3127020
Alignment:
Q  194 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3126941 taatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3127020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 7182121 - 7182199
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  7182121 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 7182199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 17873347 - 17873269
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  17873347 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacataaattgaatttgaaaaatt 17873269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 31530170 - 31530092
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  31530170 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 31530092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 32060797 - 32060719
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  32060797 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 32060719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 37756653 - 37756731
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  37756653 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 37756731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 41363742 - 41363820
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  41363742 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 41363820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 47669961 - 47669883
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47669961 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47669883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 52594556 - 52594634
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| ||| |||||||||||||    
T  52594556 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattagatttgaaaaatt 52594634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 19154167 - 19154082
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaata 304  Q
    |||||||||||||||||||||| |||||||||||||  ||||      |||||||||| ||| | ||||||||| ||||| || ||||||||    
T  19154167 atgattaatgtacttttaattttgcgagtattataaacatat------gatttgaaaatttttctcaaaccccccaaaaccttcctccaata 19154082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 45899480 - 45899420
Alignment:
Q  250 aatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaattt 310  Q
    ||||||||||||||||| ||||||||||||||| | | |||||  | ||||||||||||||    
T  45899480 aatatatattggatttggaaaatttacccaaactctccaaaaccctcctccaatacaattt 45899420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 276
Target Start/End: Complemental strand, 47687680 - 47687645
Alignment:
Q  241 tattataacaatatatattggatttgaaaaatttac 276  Q
    |||||||||||||||||||| |||||||||||||||    
T  47687680 tattataacaatatatattgaatttgaaaaatttac 47687645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 23708287 - 23708209
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||  ||| ||| |||||||||||||||||    
T  23708287 aatgataaactaatacttatgattaatatacttttaattttaagaatattatggcaacatagattggatttgaaaaatt 23708209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 24291536 - 24291458
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| | | |||| ||||||||||||    
T  24291536 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacaaagattgaatttgaaaaatt 24291458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 26702639 - 26702709
Alignment:
Q  214 tgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaaccc 284  Q
    ||||| ||||||||||||||| || ||||||||||||  |||  ||||||||| ||||||||  |||||||    
T  26702639 tgattgatgtacttttaattttgcaagtattataacagcataatttggatttggaaaatttattcaaaccc 26702709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 46176739 - 46176685
Alignment:
Q  120 gggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaa 174  Q
    ||||| |||||||| ||||||  ||||| ||||||||||| ||||||||||||||    
T  46176739 gggagggttttggagggatgagtttagaggaaaaaatagagaaatctttcaaaaa 46176685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 48830744 - 48830822
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||  |||| ||||||||||||    
T  48830744 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacattgattgaatttgaaaaatt 48830822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 49404553 - 49404631
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| || |||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  49404553 aatgataaactattacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 49404631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 13270086 - 13270026
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  13270086 atgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 13270026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 32948467 - 32948534
Alignment:
Q  205 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||| ||||||||| |||||||| ||||  || ||||||||||| ||| |||| ||||||||||||    
T  32948467 taatacttatgattaatatacttttattttaa-gaatattataacaacatagattgaatttgaaaaatt 32948534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 135 - 310
Target Start/End: Original strand, 12229341 - 12229518
Alignment:
Q  135 ggatgatattagaagaaaaaatagataaatctttcaaaaaatttaa--gtgnnnnnnnagttaatgttaaaataatactaatgattaatgtacttttaat 232  Q
    |||||| |||||| | |||||||||||| |||||||||||| || |  |||       ||| |||| ||||| |||||| ||||||||||||||||| ||    
T  12229341 ggatgagattagagggaaaaatagataagtctttcaaaaaaattgactgtgtttttctagtcaatgataaaagaatacttatgattaatgtacttttgat 12229440  T
Q  233 ttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaattt 310  Q
    || |||||||| |||||||||||||||| ||||| ||||||||||||||| ||| |||||  | ||| ||||||||||    
T  12229441 tttgcgagtatcataacaatatatattgaatttggaaaatttacccaaacaccccaaaaccctcctctaatacaattt 12229518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 19386239 - 19386330
Alignment:
Q  91 tttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaatttaagtg 183  Q
    |||||||  ||||||| ||| |||| |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  19386239 tttgtttgtgagtttggaggcaaag-gaagggagggttttggagggatgaaattagaagaaagaatagataaatctttcaaaaaatttgagtg 19386330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 28435014 - 28435082
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaa 281  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||| ||||    
T  28435014 atgattaatgtacttttaattttgcaagtattataacaatatatattggatttagaaaatttactcaaa 28435082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 31849205 - 31849284
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 292  Q
    |||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||||||| |||||    
T  31849205 atgattaatgtacttttagttttgcgagtattataaaaatttatattggatttagaaaatttactcaaaccccctaaaac 31849284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 20501031 - 20500942
Alignment:
Q  201 aaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaa 290  Q
    |||| |||||| ||||||||| | |||||||||| | ||||||||||||||||||||| | ||||| || |||||  ||||||| |||||    
T  20501031 aaaagaatacttatgattaattttcttttaattttgtgagtattataacaatatatatcgaatttggaatatttaatcaaaccctcaaaa 20500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 4648917 - 4648997
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || || |||||||| ||| |||| ||||||||||||||    
T  4648917 aatgataaactaatacttatgattaatatacttttaattttaagaatactataacaacatagattgaatttgaaaaattta 4648997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 19386531 - 19386578
Alignment:
Q  243 ttataacaatatatattggatttgaaaaatttacccaaacccccaaaaa 291  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||    
T  19386531 ttataacaatatatattgga-ttaaaaaatttacccaaaccctcaaaaa 19386578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 25598709 - 25598777
Alignment:
Q  205 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||| ||||||||| ||||||||||||    | ||||||| ||||||| |||||||||||||||||    
T  25598709 taatacttatgattaatatacttttaattttaaaaatattatagcaatatagattggatttgaaaaatt 25598777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 17093036 - 17092970
Alignment:
Q  207 atactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  17093036 atacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 17092970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 27480102 - 27480180
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||  ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  27480102 aatgataaactaatacatatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 27480180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 38302288 - 38302366
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||||||    
T  38302288 aatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagattgaatttgaaaaatt 38302366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 31323272 - 31323325
Alignment:
Q  122 gagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaa 175  Q
    |||||||||||| |||||| | |||| ||||||||||| |||| ||||||||||    
T  31323272 gagtgttttggagggatgagactagaggaaaaaatagagaaatatttcaaaaaa 31323325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 31370911 - 31370964
Alignment:
Q  122 gagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaa 175  Q
    ||||||||||||  ||||| |||||| ||||||||||| |||| ||||||||||    
T  31370911 gagtgttttggagagatgagattagaggaaaaaatagagaaatatttcaaaaaa 31370964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 31849106 - 31849155
Alignment:
Q  126 gttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaa 175  Q
    ||||||||||||||| |||||| |||||||||  ||||||||| ||||||    
T  31849106 gttttggaaggatgagattagaggaaaaaataagtaaatctttaaaaaaa 31849155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 10295616 - 10295556
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  10295616 atgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 10295556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 38568453 - 38568497
Alignment:
Q  341 attatgaagaaaagtaaaccccttatagccctcccctcccctccc 385  Q
    ||||||||||||||| ||||||  | |||||||||||||||||||    
T  38568453 attatgaagaaaagttaaccccccaaagccctcccctcccctccc 38568497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 7e-25; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 19679347 - 19679261
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaa 281  Q
    |||| ||||| |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  19679347 aatgataaaagaatacttatgattaatgtacttttaattttgcgagtattataataatatatattgaatttggaaaatttacccaaa 19679261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 38353041 - 38353120
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 292  Q
    ||||||||||||||||||||||  | |||||||||| ||||||| ||| ||| |||||||||||||||||  ||||||||    
T  38353041 atgattaatgtacttttaattttacaagtattataaaaatatattttgaattagaaaaatttacccaaacatccaaaaac 38353120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 42620282 - 42620360
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||||    
T  42620282 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 42620360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 173
Target Start/End: Complemental strand, 20513574 - 20513485
Alignment:
Q  85 ttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaa-gaaaaaatagataaatctttcaaaa 173  Q
    ||||||||||||| || ||||| |||  ||| || ||||| |||||||| |||||| ||||||| ||||||||||| |||||||||||||    
T  20513574 ttaggctttgtttgggtgtttgtaggggaagggaggggagggttttggagggatgagattagaaggaaaaaatagagaaatctttcaaaa 20513485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 5967983 - 5968061
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  5967983 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 5968061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 33113569 - 33113643
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaa 269  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||    
T  33113569 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacataaattggatttgaaa 33113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 38235945 - 38235867
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||    | ||||||||||||||| |||| ||||||||||||    
T  38235945 aatgataaactaatacttatgattaatatacttttaattttaaaaatattataacaatatagattgaatttgaaaaatt 38235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 43189008 - 43188930
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  43189008 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 43188930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 47275932 - 47276010
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||||||||||||||||    
T  47275932 aatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagattggatttgaaaaatt 47276010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 33810142 - 33810222
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| |||||| | ||||||||||||||    
T  33810142 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatatatagaatttgaaaaattta 33810222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 43778505 - 43778581
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 271  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||    
T  43778505 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaa 43778581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 41002180 - 41002259
Alignment:
Q  194 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||| |||| ||||||| ||||||||| || |||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  41002180 taatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacatagattgaatttgaaaaatt 41002259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 4178273 - 4178335
Alignment:
Q  220 atgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaac 282  Q
    ||||||||||||||| | ||||||||||||  |||||||| ||||| ||||| ||| ||||||    
T  4178273 atgtacttttaattttgtgagtattataacggtatatattagatttaaaaaaattatccaaac 4178335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 28437472 - 28437550
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  28437472 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 28437550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 33406562 - 33406640
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||| ||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  33406562 aatgataaactaacacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 33406640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 36747437 - 36747368
Alignment:
Q  205 taatactaatgattaatgtactttt-aatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||| ||||||||| ||||||| |||||   || ||||||||||||||| |||| ||||||||||||    
T  36747437 taatacttatgattaatatactttttaattttaagaatattataacaatatagattgaatttgaaaaatt 36747368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 44720232 - 44720156
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 271  Q
    |||| |||| ||||||| ||||||| | ||||||||||||   || ||||||||||||||| |||| || |||||||    
T  44720232 aatgataaactaatacttatgattagtatacttttaattttaagaatattataacaatatagattgaatatgaaaaa 44720156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 51936252 - 51936345
Alignment:
Q  215 gattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaat 308  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||| | |||||  | ||||||||||||    
T  51936252 gattaatgtacttttaattttgcaagtattataacgatatatattggatttggaaaatttacccaaaccctctaaaaccatcctccaatacaat 51936345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 25428819 - 25428739
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||||    
T  25428819 aatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattta 25428739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 38526304 - 38526226
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  38526304 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 38526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 44979530 - 44979461
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaac 282  Q
    |||||||||| | ||||||||| |  ||||||||||||| |||||||||||||| |||||||| ||||||    
T  44979530 atgattaatgaatttttaattttgaaagtattataacaacatatattggatttggaaaatttatccaaac 44979461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 2420810 - 2420732
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  2420810 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 2420732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 7661187 - 7661109
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||  ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  7661187 aatgataaactaatacttatgattaacatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 7661109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 30131816 - 30131894
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  30131816 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaagatagattgaatttgaaaaatt 30131894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 38593103 - 38593025
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| | ||||||||||    ||||||||||||| |||||||| ||||||||||||    
T  38593103 aatgataaactaatacttatgattaatatgcttttaattttaaaagtattataacaacatatattgaatttgaaaaatt 38593025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 41961907 - 41961985
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  41961907 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 41961985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 43007452 - 43007530
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  43007452 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 43007530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 47789376 - 47789454
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47789376 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47789454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 39499344 - 39499271
Alignment:
Q  200 taaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  39499344 taaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 39499271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 55439736 - 55439659
Alignment:
Q  194 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 271  Q
    ||||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||    
T  55439736 taatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaa 55439659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 47714613 - 47714681
Alignment:
Q  205 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47714613 taatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47714681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 275
Target Start/End: Complemental strand, 38515383 - 38515308
Alignment:
Q  200 taaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| ||||||| ||||||||| ||||||||||||   || |||||| |||| ||| |||| ||||||||||||||    
T  38515383 taaactaatacttatgattaatatacttttaattttaagaatattatgacaacatagattgaatttgaaaaattta 38515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 30121452 - 30121530
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||| |||| ||| |||| ||||||||||||    
T  30121452 aatgataaactaatacttatgattaatatacttttaattttaagaatattattacaacatagattgaatttgaaaaatt 30121530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 43237441 - 43237363
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| |||||||||  |||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  43237441 aatgataaactaatacttatgattaataaacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 43237363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 44979605 - 44979555
Alignment:
Q  128 tttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaattt 178  Q
    |||||| |||||| |||||| ||||||||||| |||||||||||||| |||    
T  44979605 tttggagggatgagattagaggaaaaaatagagaaatctttcaaaaatttt 44979555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 46017356 - 46017278
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||||||| ||| ||||||||| ||||||||||||    | ||||||||||| ||| |||| ||||||||||||    
T  46017356 aatgataaaataaaacttatgattaatatacttttaattttaaaaatattataacaacatagattgaatttgaaaaatt 46017278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 49860987 - 49860909
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| |||||| |||||    
T  49860987 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgataaatt 49860909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 17642740 - 17642660
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| ||  |||| ||||||||||||||    
T  17642740 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatggattgaatttgaaaaattta 17642660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 23163674 - 23163594
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| |||  |||||||||    
T  23163674 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaattaaaaaaattta 23163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 28993201 - 28993122
Alignment:
Q  89 gctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaa-tagataaatcttt 168  Q
    ||||||||| ||||||||||||  ||| || ||||| |||||||| |||||| |||| | ||||||| |||||||||||||    
T  28993201 gctttgtttgggagtttgaaggggaagggatgggag-gttttggagggatgagattaaaggaaaaaaatagataaatcttt 28993122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 25463693 - 25463770
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaa 290  Q
    ||||||||| || |||||||||  ||||||||||||||||||||   |||||| ||||||||| ||||||||||||||    
T  25463693 atgattaatataattttaatttttcgagtattataacaatatatgaaggatttaaaaaatttaaccaaacccccaaaa 25463770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 12940376 - 12940455
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 292  Q
    |||||||||||| ||  ||||| | ||||||||||||||  |||||||||||| |||||||||| ||||| ||| |||||    
T  12940376 atgattaatgtatttcaaattttgggagtattataacaacgtatattggatttaaaaaatttactcaaactccccaaaac 12940455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 3038877 - 3038955
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3038877 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3038955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 4042115 - 4042037
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  4042115 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 4042037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 8410860 - 8410938
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  8410860 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 8410938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 8555706 - 8555784
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||||    
T  8555706 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 8555784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 13765869 - 13765947
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  13765869 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 13765947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 36567208 - 36567286
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  36567208 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 36567286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 40357608 - 40357530
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| || |||||||||   || ||||||||||| ||| |||||||||||||||||    
T  40357608 aatgataaactaatacttatgattaatataattttaattttaagaatattataacaacatagattggatttgaaaaatt 40357530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 26051921 - 26052018
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 292  Q
    |||| |||| ||| ||||||  ||||| || ||||||||| |  |||| |||||||| |||||||| |||| ||||||||||||||| ||| ||||||    
T  26051921 aatgataaattaacactaatttttaatttatttttaattttgaaagtactataacaacatatattgaatttaaaaaatttacccaaatccctaaaaac 26052018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 31899291 - 31899364
Alignment:
Q  200 taaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| ||||| | ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||||    
T  31899291 taaactaatagttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 31899364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 3119792 - 3119860
Alignment:
Q  205 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3119792 taatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3119860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 18826166 - 18826234
Alignment:
Q  205 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  18826166 taatacttatgattaatatacttttaattttaagaatattataacaacataaattgaatttgaaaaatt 18826234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 38023377 - 38023457
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| |||| || ||||||||| ||||||||||||   || ||||||||||| ||  |||||||||||||||||||    
T  38023377 aatgataaactaattcttatgattaatatacttttaattttaagaatattataacaacattgattggatttgaaaaattta 38023457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 44020490 - 44020410
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||| ||||    
T  44020490 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaagttta 44020410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 32243626 - 32243547
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaat-atatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||||||| ||| |||| ||||||||||||    
T  32243626 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaatcatagattgaatttgaaaaatt 32243547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 2057465 - 2057395
Alignment:
Q  239 agtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttc-tccaatacaat 308  Q
    ||||||||| ||| ||| | ||||||||||||| ||||||||||||| |||||| | || |||||||||||    
T  2057465 agtattatagcaacatagaatggatttgaaaaacttacccaaacccctaaaaacttctcatccaatacaat 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 8990893 - 8990967
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaa 269  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||    
T  8990893 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaa 8990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 31550192 - 31550270
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || |||||| |||| ||| |||||||||||||||||    
T  31550192 aatgataaactaatagttatgattaatatacttttaattttaagaatattatgacaacatagattggatttgaaaaatt 31550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 38294039 - 38293961
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||| ||||||    
T  38294039 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttggaaaatt 38293961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 5321814 - 5321858
Alignment:
Q  341 attatgaagaaaagtaaaccccttatagccctcccctcccctccc 385  Q
    ||||||||||||| ||||||||  | |||||||||||||||||||    
T  5321814 attatgaagaaaactaaaccccccaaagccctcccctcccctccc 5321858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 12963919 - 12963979
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||||| ||||||||||||   || |||||||| || ||| |||||||||||||||||    
T  12963919 atgattaatatacttttaattttaagaatattataaaaacatagattggatttgaaaaatt 12963979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 14008259 - 14008335
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 271  Q
    |||| |||| ||||||| ||||||||| ||||||| ||||   || ||||||||||| ||| |||| ||||||||||    
T  14008259 aatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagattgaatttgaaaaa 14008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 25463613 - 25463653
Alignment:
Q  135 ggatgatattagaagaaaaaatagataaatctttcaaaaaa 175  Q
    |||||| || ||| |||||||||||||||||||||||||||    
T  25463613 ggatgagatcagaggaaaaaatagataaatctttcaaaaaa 25463653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 42644910 - 42644822
Alignment:
Q  85 ttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaa-tagataaatctttcaaa 172  Q
    ||||||| ||||| |||||||| |||  ||| || | ||| |||||||| |||||| |||||| ||||||| |||| ||||||||||||    
T  42644910 ttaggctctgtttgggagtttggaggggaagggaggagagggttttggagggatgagattagaggaaaaaaatagagaaatctttcaaa 42644822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 44137276 - 44137208
Alignment:
Q  205 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||||||    
T  44137276 taatacttatgattaatatacttttaattttaagaatattataagaacatagattgaatttgaaaaatt 44137208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 291 - 211
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||||    
T  291 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattggatttgaaaaattta 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 2302 - 2382
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||||    
T  2302 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattggatttgaaaaattta 2382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 8950458 - 8950394
Alignment:
Q  213 atgattaatgtacttttaattt-agcgagtattataacaatatatattggatttgaaaaatttac 276  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||    
T  8950458 atgattagtgtacttttaattttagcgagtaatataacaatatatattgaatttggaaaatttac 8950394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 34349866 - 34349788
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  34349866 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 34349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 1941991 - 1942061
Alignment:
Q  203 aataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  1941991 aataatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 1942061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 3404504 - 3404582
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3404504 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3404582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 34272666 - 34272588
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  34272666 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 34272588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 36102820 - 36102898
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  36102820 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 36102898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 36906338 - 36906260
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||| |||| ||| |||||||||||||||||    
T  36906338 aatgataaactaatacttatgattaatatacttttaattttaagaatattatgacaacatagattggatttgaaaaatt 36906260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 37659461 - 37659541
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 275  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||||||||    
T  37659461 aatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagattgaatttgaaaaattta 37659541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 2474696 - 2474775
Alignment:
Q  194 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||| |||| ||||||| ||| ||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  2474696 taatgataaactaatacttatggttaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 2474775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 25033532 - 25033453
Alignment:
Q  194 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    ||||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| || | ||||||||||||    
T  25033532 taatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatcgaatttgaaaaatt 25033453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 13865022 - 13865100
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||  ||||||||||||    
T  13865022 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattaaatttgaaaaatt 13865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 24801881 - 24801809
Alignment:
Q  206 aatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttaccc 278  Q
    |||||| |||||||||||| ||||||||| |  ||||| || ||||| |||||||||||||||||||||||||    
T  24801881 aatacttatgattaatgtatttttaattttgtaagtataattacaatgtatattggatttgaaaaatttaccc 24801809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 23095058 - 23095136
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  23095058 aatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 23095136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 6026311 - 6026208
Alignment:
Q  206 aatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatac 305  Q
    |||||| |||||||||||| |||||| || |  | ||||||||||||||| ||||||||||||||| | || |||||| || ||||| | | ||||||||    
T  6026311 aatacttatgattaatgtatttttaactttgaaaatattataacaatatagattggatttgaaaaactgactcaaacctcccaaaacctct-tccaatac 6026213  T
Q  306 aattt 310  Q
    |||||    
T  6026212 aattt 6026208  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 24735031 - 24734953
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  24735031 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 24734953  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 26574325 - 26574403
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  26574325 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 26574403  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 34914778 - 34914700
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  34914778 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacataaattgaatttgaaaaatt 34914700  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 1029444 - 1029366
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| |||||||  |||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  1029444 aatgataaactaatacttgtgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 1029366  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 5825483 - 5825405
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| |||| |||||||    
T  5825483 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttcaaaaatt 5825405  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 26481061 - 26481139
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||||||  || |||| ||||||||||||    
T  26481061 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacgtagattgaatttgaaaaatt 26481139  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 29241763 - 29241841
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||||||    
T  29241763 aatgataaactaatacttatgattaatatacttttaattttaagaatattataagaacatagattgaatttgaaaaatt 29241841  T

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Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 74648 - 74709
Alignment:
Q  213 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttac 276  Q
    ||||||||| |||||||||||| || ||||||||||||  | ||||||||||||||||||||||    
T  74648 atgattaatatacttttaattttgcaagtattataaca--acatattggatttgaaaaatttac 74709  T

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Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 1729 - 1651
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| || |||||||||   || ||||||||||| ||| |||||||||||||||||    
T  1729 aatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacatagattggatttgaaaaatt 1651  T

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Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 35385 - 35463
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  35385 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 35463  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 3600 - 3678
Alignment:
Q  195 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 273  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| ||| ||||| |||||||    
T  3600 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatttgattttaaaaatt 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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