View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14194_low_18 (Length: 303)
Name: NF14194_low_18
Description: NF14194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14194_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 31 - 285
Target Start/End: Original strand, 18402449 - 18402703
Alignment:
| Q |
31 |
tgttaaattaagtggtgaccaaatatatagaggaaaaagaagatcaattgagatgatataaggaattgagagtaaacaatttagtgtcattgtatcatta |
130 |
Q |
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| T |
18402449 |
tgttaaattaagtggtgatcaaatatatagaggaaaaagaagatcaattgagatggtacaagggattgagagtaaacaatttagtgtcatggtatcatta |
18402548 |
T |
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| Q |
131 |
aattttggatggttaaattataagttggtcaaaatttctgaaatggggaccaaaatcacgcaattaaaaacgacagaccaaaattatgctttggccaaaa |
230 |
Q |
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| T |
18402549 |
aattttggatggttaaattataagttggtcaaaatttcagaaatggggaccaaaatcacggaattaaaaacgacagaccaaaattatggtttggccaaaa |
18402648 |
T |
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| Q |
231 |
taagaaggtcaaaatagcatttaagcctaaaattaactatgcaacatggaaaaat |
285 |
Q |
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||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
18402649 |
taaaaagatcaaaatagcatttaaacctaaaattaactatgcaacatggaaaaat |
18402703 |
T |
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