View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14194_low_20 (Length: 302)

Name: NF14194_low_20
Description: NF14194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14194_low_20
NF14194_low_20
[»] scaffold0568 (1 HSPs)
scaffold0568 (94-238)||(9656-9800)
[»] chr4 (55 HSPs)
chr4 (94-238)||(17061072-17061216)
chr4 (94-238)||(21363750-21363893)
chr4 (37-99)||(344116-344178)
chr4 (37-99)||(11152506-11152568)
chr4 (37-99)||(22515860-22515922)
chr4 (37-99)||(24281714-24281776)
chr4 (37-99)||(28756513-28756575)
chr4 (37-99)||(29445834-29445896)
chr4 (37-99)||(35015628-35015690)
chr4 (37-99)||(38698672-38698734)
chr4 (37-99)||(47016087-47016149)
chr4 (37-96)||(1776479-1776538)
chr4 (37-96)||(8949823-8949882)
chr4 (37-96)||(11455273-11455332)
chr4 (37-96)||(16618693-16618752)
chr4 (37-96)||(39269960-39270019)
chr4 (37-96)||(40943468-40943527)
chr4 (37-96)||(53231058-53231117)
chr4 (37-96)||(53237817-53237876)
chr4 (37-99)||(9428265-9428327)
chr4 (37-99)||(34680175-34680237)
chr4 (37-99)||(34757118-34757180)
chr4 (37-99)||(39656437-39656499)
chr4 (37-99)||(52224742-52224804)
chr4 (37-94)||(20425194-20425251)
chr4 (37-94)||(35627391-35627448)
chr4 (39-99)||(25767864-25767924)
chr4 (37-96)||(15637120-15637179)
chr4 (37-100)||(19320661-19320724)
chr4 (37-96)||(28706315-28706374)
chr4 (37-96)||(47500055-47500114)
chr4 (37-96)||(52823196-52823255)
chr4 (37-99)||(6203397-6203459)
chr4 (37-99)||(23708718-23708780)
chr4 (37-99)||(29246747-29246809)
chr4 (37-99)||(50642446-50642508)
chr4 (37-96)||(4553574-4553633)
chr4 (37-96)||(10386542-10386601)
chr4 (37-96)||(11996897-11996956)
chr4 (37-100)||(23624684-23624747)
chr4 (37-92)||(42642841-42642896)
chr4 (37-99)||(28541056-28541118)
chr4 (38-96)||(47875775-47875835)
chr4 (37-96)||(23064259-23064318)
chr4 (37-96)||(31312347-31312406)
chr4 (37-96)||(34509957-34510016)
chr4 (37-96)||(39789094-39789153)
chr4 (37-96)||(42930999-42931058)
chr4 (37-90)||(18092923-18092976)
chr4 (37-92)||(52788701-52788756)
chr4 (37-80)||(40943769-40943812)
chr4 (38-80)||(10386876-10386918)
chr4 (38-80)||(23063949-23063991)
chr4 (38-87)||(11692082-11692131)
chr4 (170-238)||(42063147-42063215)
[»] chr2 (41 HSPs)
chr2 (94-238)||(23904676-23904819)
chr2 (37-99)||(9737318-9737380)
chr2 (37-99)||(41178907-41178969)
chr2 (37-96)||(2431056-2431115)
chr2 (37-96)||(6206038-6206097)
chr2 (37-96)||(16709343-16709402)
chr2 (37-96)||(18549714-18549773)
chr2 (37-96)||(20505740-20505799)
chr2 (37-99)||(7662577-7662639)
chr2 (37-99)||(20973445-20973507)
chr2 (37-96)||(5363483-5363542)
chr2 (37-96)||(7748847-7748906)
chr2 (37-96)||(10214654-10214713)
chr2 (37-96)||(10972667-10972726)
chr2 (37-96)||(14541996-14542055)
chr2 (37-96)||(17615142-17615201)
chr2 (37-96)||(31653562-31653621)
chr2 (37-96)||(36218831-36218890)
chr2 (37-99)||(37850520-37850582)
chr2 (39-96)||(40855325-40855382)
chr2 (37-96)||(6673443-6673502)
chr2 (37-96)||(7401858-7401917)
chr2 (37-92)||(39374911-39374966)
chr2 (38-96)||(30274140-30274198)
chr2 (38-96)||(38063256-38063314)
chr2 (37-99)||(43270924-43270986)
chr2 (37-94)||(12620541-12620598)
chr2 (37-94)||(39670602-39670659)
chr2 (38-96)||(33666405-33666463)
chr2 (37-99)||(35516149-35516211)
chr2 (41-96)||(3855109-3855164)
chr2 (37-96)||(6708293-6708352)
chr2 (37-96)||(42520756-42520815)
chr2 (37-99)||(45301107-45301169)
chr2 (47-96)||(44300427-44300476)
chr2 (44-99)||(3563430-3563485)
chr2 (45-99)||(3201993-3202047)
chr2 (128-172)||(36145207-36145251)
chr2 (37-80)||(2430771-2430814)
chr2 (37-68)||(7748916-7748947)
chr2 (37-80)||(20505455-20505498)
[»] chr7 (31 HSPs)
chr7 (94-238)||(45625349-45625492)
chr7 (37-100)||(30740508-30740571)
chr7 (37-99)||(21202121-21202183)
chr7 (37-99)||(28642683-28642745)
chr7 (37-99)||(34651426-34651488)
chr7 (37-99)||(39035683-39035745)
chr7 (37-99)||(45986029-45986091)
chr7 (37-96)||(11620249-11620308)
chr7 (37-96)||(17314902-17314961)
chr7 (37-96)||(36039782-36039841)
chr7 (37-96)||(498940-498999)
chr7 (37-96)||(23023362-23023421)
chr7 (37-94)||(24424118-24424175)
chr7 (37-96)||(33772225-33772284)
chr7 (37-96)||(41098603-41098662)
chr7 (37-99)||(47463419-47463481)
chr7 (38-99)||(14962395-14962456)
chr7 (38-99)||(15391867-15391928)
chr7 (37-89)||(27428642-27428694)
chr7 (37-96)||(2510873-2510932)
chr7 (37-92)||(46157912-46157967)
chr7 (44-99)||(47229410-47229465)
chr7 (37-96)||(47784650-47784709)
chr7 (38-95)||(23064649-23064706)
chr7 (37-94)||(42335360-42335417)
chr7 (37-90)||(7207841-7207894)
chr7 (37-80)||(30740224-30740267)
chr7 (38-80)||(9104852-9104894)
chr7 (38-80)||(45986364-45986406)
chr7 (38-86)||(7901360-7901408)
chr7 (170-238)||(34095723-34095791)
[»] chr1 (56 HSPs)
chr1 (94-238)||(48224534-48224677)
chr1 (37-99)||(2207433-2207495)
chr1 (37-99)||(4573914-4573976)
chr1 (37-99)||(10658456-10658518)
chr1 (37-99)||(26451379-26451441)
chr1 (37-99)||(34075897-34075959)
chr1 (37-99)||(48723723-48723785)
chr1 (37-96)||(10372598-10372657)
chr1 (37-96)||(14411135-14411194)
chr1 (37-96)||(26911008-26911067)
chr1 (37-96)||(46184630-46184689)
chr1 (37-96)||(48624103-48624162)
chr1 (37-99)||(4789139-4789201)
chr1 (37-99)||(25136787-25136849)
chr1 (38-96)||(45194671-45194729)
chr1 (37-96)||(4008648-4008707)
chr1 (37-96)||(7586786-7586845)
chr1 (37-96)||(17964312-17964371)
chr1 (37-96)||(31861462-31861521)
chr1 (37-96)||(43030495-43030554)
chr1 (37-96)||(52527043-52527102)
chr1 (37-96)||(52711074-52711133)
chr1 (37-99)||(10382928-10382990)
chr1 (37-99)||(32037103-32037165)
chr1 (37-99)||(36796231-36796293)
chr1 (37-99)||(46667815-46667877)
chr1 (37-94)||(31266802-31266859)
chr1 (37-94)||(45717147-45717204)
chr1 (40-99)||(14421468-14421526)
chr1 (37-96)||(45336646-45336705)
chr1 (41-99)||(26507806-26507864)
chr1 (37-99)||(27851137-27851199)
chr1 (37-99)||(36449352-36449414)
chr1 (37-96)||(47632492-47632551)
chr1 (37-96)||(48468070-48468129)
chr1 (37-83)||(4647430-4647476)
chr1 (37-99)||(10371422-10371484)
chr1 (37-94)||(4058006-4058063)
chr1 (37-94)||(10895938-10895995)
chr1 (37-94)||(14743778-14743835)
chr1 (40-89)||(40723339-40723388)
chr1 (37-90)||(52760706-52760759)
chr1 (37-93)||(45583412-45583468)
chr1 (38-96)||(7603919-7603977)
chr1 (38-96)||(28254102-28254160)
chr1 (37-80)||(9130485-9130528)
chr1 (37-88)||(48609701-48609752)
chr1 (37-83)||(45323473-45323519)
chr1 (37-80)||(7604221-7604264)
chr1 (37-80)||(10371138-10371181)
chr1 (37-80)||(10896237-10896280)
chr1 (55-90)||(35766499-35766534)
chr1 (38-80)||(14243839-14243881)
chr1 (38-80)||(28253858-28253900)
chr1 (38-80)||(45336395-45336437)
chr1 (38-80)||(48468406-48468448)
[»] chr8 (47 HSPs)
chr8 (37-99)||(24541690-24541752)
chr8 (37-96)||(16356202-16356261)
chr8 (37-96)||(35209396-35209455)
chr8 (37-99)||(11385759-11385821)
chr8 (38-96)||(13083067-13083125)
chr8 (37-99)||(19182789-19182851)
chr8 (37-99)||(22849681-22849743)
chr8 (37-99)||(30378389-30378451)
chr8 (37-99)||(32098967-32099029)
chr8 (37-99)||(39106705-39106767)
chr8 (37-94)||(16728950-16729007)
chr8 (37-94)||(42175037-42175094)
chr8 (37-97)||(12616681-12616741)
chr8 (37-92)||(7420034-7420089)
chr8 (37-96)||(8076530-8076589)
chr8 (37-96)||(18365455-18365514)
chr8 (37-96)||(28174086-28174145)
chr8 (40-99)||(36052119-36052178)
chr8 (40-99)||(41315268-41315327)
chr8 (37-92)||(42219160-42219215)
chr8 (37-99)||(4137181-4137243)
chr8 (37-99)||(36765793-36765855)
chr8 (38-96)||(41725082-41725140)
chr8 (37-99)||(43470753-43470815)
chr8 (37-97)||(27923907-27923967)
chr8 (37-96)||(13699705-13699764)
chr8 (37-96)||(24685668-24685727)
chr8 (37-96)||(34058960-34059019)
chr8 (37-96)||(42174326-42174385)
chr8 (37-99)||(34050426-34050488)
chr8 (37-99)||(41219865-41219927)
chr8 (37-89)||(30611299-30611351)
chr8 (37-96)||(2061175-2061234)
chr8 (37-96)||(45421656-45421715)
chr8 (37-99)||(41161821-41161883)
chr8 (37-83)||(44090307-44090353)
chr8 (37-96)||(4517245-4517304)
chr8 (38-96)||(17918647-17918705)
chr8 (37-86)||(45239824-45239873)
chr8 (36-87)||(12000328-12000379)
chr8 (37-80)||(27520150-27520193)
chr8 (38-80)||(8076212-8076254)
chr8 (38-80)||(17918982-17919024)
chr8 (38-80)||(24685350-24685392)
chr8 (37-66)||(7636940-7636969)
chr8 (39-80)||(16355944-16355985)
chr8 (55-92)||(26447290-26447327)
[»] chr6 (12 HSPs)
chr6 (37-99)||(13400473-13400535)
chr6 (37-99)||(19692991-19693053)
chr6 (37-96)||(5359485-5359544)
chr6 (37-96)||(15054106-15054165)
chr6 (37-96)||(31279874-31279933)
chr6 (38-96)||(945696-945754)
chr6 (37-90)||(22423276-22423329)
chr6 (38-99)||(33971252-33971313)
chr6 (37-96)||(30753627-30753685)
chr6 (47-96)||(22007007-22007056)
chr6 (37-80)||(7855764-7855807)
chr6 (38-80)||(13400158-13400200)
[»] chr5 (36 HSPs)
chr5 (37-99)||(14711778-14711840)
chr5 (37-99)||(38983601-38983663)
chr5 (37-99)||(42992687-42992749)
chr5 (38-99)||(24089904-24089965)
chr5 (37-96)||(4034870-4034929)
chr5 (37-96)||(4123396-4123455)
chr5 (37-96)||(8980205-8980264)
chr5 (37-96)||(25001065-25001124)
chr5 (37-99)||(6450336-6450398)
chr5 (37-99)||(19000431-19000493)
chr5 (37-94)||(7572828-7572885)
chr5 (37-96)||(18404567-18404626)
chr5 (37-96)||(19928366-19928425)
chr5 (37-96)||(24334213-24334272)
chr5 (37-96)||(27189268-27189327)
chr5 (37-96)||(27432302-27432361)
chr5 (37-96)||(41907060-41907119)
chr5 (39-96)||(22671179-22671236)
chr5 (37-93)||(7234359-7234415)
chr5 (37-96)||(796082-796141)
chr5 (37-96)||(5597583-5597642)
chr5 (37-96)||(8315408-8315467)
chr5 (37-99)||(4291530-4291592)
chr5 (37-99)||(18740529-18740590)
chr5 (37-96)||(34819115-34819174)
chr5 (37-94)||(20453233-20453290)
chr5 (44-96)||(36816593-36816645)
chr5 (37-96)||(22982185-22982244)
chr5 (38-89)||(32299606-32299657)
chr5 (37-96)||(33010607-33010666)
chr5 (37-96)||(38265732-38265791)
chr5 (37-92)||(156036-156091)
chr5 (37-92)||(18075901-18075956)
chr5 (37-80)||(22671480-22671523)
chr5 (38-80)||(19928701-19928743)
chr5 (38-80)||(22981868-22981910)
[»] chr3 (54 HSPs)
chr3 (37-99)||(869291-869353)
chr3 (37-99)||(3078219-3078281)
chr3 (37-99)||(19006565-19006627)
chr3 (37-99)||(28055451-28055513)
chr3 (37-99)||(28065876-28065938)
chr3 (38-99)||(53328360-53328421)
chr3 (37-96)||(4993944-4994003)
chr3 (37-96)||(10182428-10182487)
chr3 (37-96)||(30663937-30663996)
chr3 (37-96)||(32245932-32245991)
chr3 (37-96)||(36777714-36777773)
chr3 (37-96)||(40127086-40127145)
chr3 (36-99)||(43729610-43729673)
chr3 (37-96)||(53628834-53628893)
chr3 (37-96)||(53947405-53947464)
chr3 (37-96)||(55006353-55006412)
chr3 (37-99)||(24342513-24342575)
chr3 (37-99)||(50133722-50133784)
chr3 (38-99)||(45454183-45454244)
chr3 (37-93)||(50362237-50362293)
chr3 (37-96)||(16128378-16128437)
chr3 (37-96)||(30778952-30779011)
chr3 (37-92)||(30786777-30786832)
chr3 (37-96)||(43127883-43127942)
chr3 (37-96)||(48586071-48586130)
chr3 (37-96)||(53657849-53657908)
chr3 (37-99)||(4735630-4735692)
chr3 (37-99)||(15490954-15491016)
chr3 (37-99)||(34226225-34226287)
chr3 (37-99)||(34779509-34779571)
chr3 (38-96)||(51324896-51324954)
chr3 (37-94)||(37125825-37125882)
chr3 (40-96)||(16787337-16787393)
chr3 (44-96)||(19878242-19878294)
chr3 (37-93)||(45344229-45344285)
chr3 (37-96)||(31269432-31269491)
chr3 (37-96)||(49612135-49612194)
chr3 (37-99)||(47198846-47198908)
chr3 (37-94)||(33390874-33390931)
chr3 (37-96)||(1487149-1487208)
chr3 (37-96)||(25578239-25578298)
chr3 (37-96)||(42367593-42367652)
chr3 (37-96)||(43660257-43660316)
chr3 (37-96)||(51368299-51368358)
chr3 (42-96)||(8339524-8339578)
chr3 (37-81)||(29166880-29166924)
chr3 (37-96)||(16644470-16644529)
chr3 (37-99)||(23878433-23878495)
chr3 (37-99)||(50762808-50762870)
chr3 (37-85)||(45009158-45009206)
chr3 (48-89)||(23251884-23251925)
chr3 (37-80)||(53963597-53963640)
chr3 (37-83)||(53519923-53519969)
chr3 (38-80)||(53629171-53629213)
[»] scaffold0029 (2 HSPs)
scaffold0029 (37-99)||(17193-17255)
scaffold0029 (37-99)||(42240-42302)
[»] scaffold0493 (2 HSPs)
scaffold0493 (37-100)||(7062-7125)
scaffold0493 (37-80)||(7367-7410)
[»] scaffold0011 (1 HSPs)
scaffold0011 (38-96)||(235280-235338)


Alignment Details
Target: scaffold0568 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0568
Description:

Target: scaffold0568; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 9800 - 9656
Alignment:
Q  94 cctatttctttcttagtgtatttaggatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 193  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9800 cctatttctttcttagtgtatttaagatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 9701  T
Q  194 gattaagcataccattggagttattgtgttacatttcacactata 238  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  9700 gattaagcatcccattggagttattgtgttacatttcacactata 9656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 17061216 - 17061072
Alignment:
Q  94 cctatttctttcttagtgtatttaggatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 193  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17061216 cctatatctttcttggtgtatttaggatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 17061117  T
Q  194 gattaagcataccattggagttattgtgttacatttcacactata 238  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  17061116 gattaagcatcccattggagttattgtgttacatttcacactata 17061072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 21363893 - 21363750
Alignment:
Q  94 cctatttctttcttagtgtatttaggatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 193  Q
    ||||||||||| ||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  21363893 cctatttcttttttagtgtatttaggacgacttcttccatggaccagttggtcaatatgttccaccatggatcaattttattagattctttgaa-catca 21363795  T
Q  194 gattaagcataccattggagttattgtgttacatttcacactata 238  Q
    || ||||||| ||||||||||||||||||| ||||||||||||||    
T  21363794 gactaagcatcccattggagttattgtgttgcatttcacactata 21363750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 344178 - 344116
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  344178 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 344116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 11152568 - 11152506
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11152568 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 11152506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 22515922 - 22515860
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22515922 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 22515860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 24281714 - 24281776
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24281714 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 24281776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 28756575 - 28756513
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28756575 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 28756513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 29445896 - 29445834
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29445896 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 29445834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 35015690 - 35015628
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015690 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 35015628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 38698672 - 38698734
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38698672 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 38698734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 47016087 - 47016149
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47016087 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 47016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 1776479 - 1776538
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1776479 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 1776538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 8949882 - 8949823
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8949882 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 8949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 11455332 - 11455273
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11455332 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 11455273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 16618693 - 16618752
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16618693 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 16618752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 39270019 - 39269960
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39270019 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 39269960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 40943527 - 40943468
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40943527 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 40943468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 53231058 - 53231117
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53231058 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 53231117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 53237817 - 53237876
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53237817 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 53237876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 9428327 - 9428265
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9428327 gtttaagcacaattaaacaaattttaattttacaaggactaaaagtatgtgttggtccctatt 9428265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 34680175 - 34680237
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34680175 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttgttccctatt 34680237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 34757180 - 34757118
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34757180 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtggtggtccctatt 34757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 39656499 - 39656437
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39656499 gtttaagcacaattaaacaaattttaattttacaaggactaaaagtatgtgttggtccctatt 39656437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 52224804 - 52224742
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52224804 gtttaagcacaattaagcaaattttaattttacaaggattaaaagtatgtgttggtccctatt 52224742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 20425251 - 20425194
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20425251 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 20425194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 35627448 - 35627391
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35627448 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 35627391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 25767864 - 25767924
Alignment:
Q  39 ttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25767864 ttaagcacaattaagcaaattttaattttacaaggactaaaagtatgcgttggtccctatt 25767924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 15637179 - 15637120
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15637179 gtttaagcacaattaagcaaattttaattttacaaggactaaaactatgtgttggtccct 15637120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 19320661 - 19320724
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctattt 100  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19320661 gtttaagcacaattaagaaaaatttaattttacaaggactaaaagtatgtgttggtccctattt 19320724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 28706374 - 28706315
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28706374 gtttaagcacaattaagcaaattttaattttacaaggacaaaaagtatgtgttggtccct 28706315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 47500055 - 47500114
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47500055 gtttaagcataattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 47500114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 52823196 - 52823255
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52823196 gtttaagcacaattgagcaaattttaattttacaaggactaaaagtatgtgttggtccct 52823255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 6203459 - 6203397
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  6203459 gtttaagcacaattaaaaaaattttaattttacaaggactaaaagtatgtgttggtccctatt 6203397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 23708718 - 23708780
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  23708718 gtttaagcacaattaagcaaattttaattttacatggactaaaagtatgtgttggttcctatt 23708780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 29246747 - 29246809
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29246747 gtttaagcacaattaagcatattttaattttacaacgactaaaagtatgtgttggtccctatt 29246809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 50642446 - 50642508
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  50642446 gtttaagcacaattaagtgaattttaattttacaaggactaaaagtatgtgttggtccctatt 50642508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 4553633 - 4553574
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4553633 gtttaatcacaattaagaaaattttaattttacaaggactaaaagtatgtgttggtccct 4553574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 10386542 - 10386601
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10386542 gtttaagcataattaagaaaattttaattttacaaggactaaaagtatgtgttggtccct 10386601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 11996897 - 11996956
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  11996897 gtttaagcacaattaaacaaattttaattttacaaggactaaaagtatgtgtttgtccct 11996956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 23624747 - 23624684
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctattt 100  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23624747 gtttaagcacaattaagaaaattttaaatttacaaagactaaaagtatgtgttggtccctattt 23624684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 42642841 - 42642896
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42642841 gtttaagcacgattaagcaaattttaattttacaaggactaaaagtatgtgttggt 42642896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 28541118 - 28541056
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  28541118 gtttaagcataattaagcaaattttaattttacaaggtctaaaagtatgtgttggtctctatt 28541056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 47875775 - 47875835
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaag--gactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  47875775 tttaagcacaattaagcaaattttaattttacaaggtgactaaaagtatgtgttggtccct 47875835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 23064318 - 23064259
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  23064318 gtttaagtacaattaagcaaattttaattttataaagactaaaagtatgtgttggtccct 23064259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 31312406 - 31312347
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  31312406 gtttaagcacaattaagaaaattttaatcttataaggactaaaagtatgtgttggtccct 31312347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 34510016 - 34509957
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  34510016 gtttaagcacaattaagcaatttttaattttacagggactaaaagtatgtgttagtccct 34509957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 39789153 - 39789094
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  39789153 gtttaagcacaattaaacaaattttaattttacaaggaataaaaatatgtgttggtccct 39789094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 42930999 - 42931058
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42930999 gtttaaacacgattaagcaaattttaattttacaaggattaaaagtatgtgttggtccct 42931058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 18092976 - 18092923
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttg 90  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  18092976 gtttaagcacaattaaacaaattttaattttacaaggacaaaaagtatgtgttg 18092923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 52788701 - 52788756
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  52788701 gtttaaacacaattaagcaaattttaattttaaaagcactaaaagtatgtgttggt 52788756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 40943769 - 40943812
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  40943769 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 40943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 10386876 - 10386918
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  10386876 tttaagcataattaaacaaattttaatttaacaaggactaaaa 10386918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 23063991 - 23063949
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  23063991 tttaagcataattaaacaaattttaatttaacaaggactaaaa 23063949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 11692131 - 11692082
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtg 87  Q
    |||||||| ||||||  ||||||||||||||||||||| ||||| |||||    
T  11692131 tttaagcataattaaataaattttaattttacaaggaccaaaagcatgtg 11692082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 42063147 - 42063215
Alignment:
Q  170 tttataagattcttcgaaccatcagattaagcataccattggagttattgtgttacatttcacactata 238  Q
    ||||| ||||| || |||||||||||||||||||  || | | ||||||||||| | ||||||||||||    
T  42063147 tttattagattttttgaaccatcagattaagcatctcactagtgttattgtgttgcctttcacactata 42063215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 23904676 - 23904819
Alignment:
Q  94 cctatttctttcttagtgtatttaggatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 193  Q
    ||||||||||| ||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  23904676 cctatttcttttttagtgtatttaggacgacttcttccatggaccagttggtcaatatgttccaccatggatcaattttattagattctttgaa-catca 23904774  T
Q  194 gattaagcataccattggagttattgtgttacatttcacactata 238  Q
    || ||||||| ||||||||||||||||||| ||||||||||||||    
T  23904775 gactaagcatcccattggagttattgtgttgcatttcacactata 23904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 9737318 - 9737380
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9737318 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 9737380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 41178969 - 41178907
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41178969 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 41178907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 2431056 - 2431115
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2431056 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 2431115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 6206097 - 6206038
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6206097 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 6206038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 16709402 - 16709343
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16709402 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 16709343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 18549773 - 18549714
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18549773 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 18549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 20505740 - 20505799
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20505740 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 20505799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 7662639 - 7662577
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7662639 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtaggtgttggtccctatt 7662577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 20973507 - 20973445
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20973507 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccatatt 20973445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 5363483 - 5363542
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5363483 gtttaagcacaattaagcaaattttaattttacaatgactaaaagtatgtgttggtccct 5363542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 7748906 - 7748847
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7748906 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtttgtccct 7748847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 10214654 - 10214713
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10214654 gtttaagcacaattaatcaaattttaattttacaaggactaaaagtatgtgttggtccct 10214713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 10972726 - 10972667
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10972726 gtttaagcacaattaagcaaattttaattttacaaggaataaaagtatgtgttggtccct 10972667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 14541996 - 14542055
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14541996 gtttaagcacaattaagcaaattttaattttacaagggctaaaagtatgtgttggtccct 14542055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 17615201 - 17615142
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17615201 gtttaagcacaattaagccaattttaattttacaaggactaaaagtatgtgttggtccct 17615142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 31653621 - 31653562
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31653621 gtttaagcacaattaagcaatttttaattttacaaggactaaaagtatgtgttggtccct 31653562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 36218890 - 36218831
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36218890 gtttaagcacaattaagcaaattttaattttacaaggactaaaactatgtgttggtccct 36218831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 37850582 - 37850520
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  37850582 gtttaagcacaattaagaaaattttaattttacaaggaccaaaagtatgtgttggtccctatt 37850520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 40855382 - 40855325
Alignment:
Q  39 ttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40855382 ttaagcacaattaagcaaattttaattttacaaggactaaaaatatgtgttggtccct 40855325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 6673443 - 6673502
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6673443 gtttaagtacaattaagcaaattttaattttacaaggactaaaagtatgtgtttgtccct 6673502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 7401917 - 7401858
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  7401917 gtttaagcacaattaagcaaattctaattttacaaggactaaaagtatatgttggtccct 7401858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 39374911 - 39374966
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39374911 gtttaagcacaattaagcaaattttaattttacaaagactaaaagtatgtgttggt 39374966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 30274140 - 30274198
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  30274140 tttaagcacaattaagcaaattttaattttacaaggagtaaaagtatgtgttgatccct 30274198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 38063314 - 38063256
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38063314 tttaaacacaattaagcaaattttaattttacaaggactaaaagtatgtggtggtccct 38063256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 43270924 - 43270986
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  43270924 gtttaagaacaattaaacaaattttaattttacaaggactaaaagtaggtgttggtccctatt 43270986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 12620598 - 12620541
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12620598 gtttaatcacaattaagaaaattttaattttacaaggactaaaagtatgtgttggtcc 12620541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 39670659 - 39670602
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  39670659 gtttaagcacagttaagcaaattttaatttcacaaggactaaaagtatgtgttggtcc 39670602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 33666405 - 33666463
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  33666405 tttaagcacaattaagcaaattttaattttacatagactaaaagtatgtgtttgtccct 33666463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 35516149 - 35516211
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||| |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  35516149 gtttaaacacaattaagcaaattttaattttacgaggactaaaaatatgtgtcggtccctatt 35516211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 3855164 - 3855109
Alignment:
Q  41 aagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  3855164 aagcataattaagaaaattttaattttacaaggactagaagtatgtgttggtccct 3855109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 6708293 - 6708352
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||  ||||||||||    
T  6708293 gtttaagcacaattaagcaagtattaattttacaaggactaaaagtattcgttggtccct 6708352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 42520756 - 42520815
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  42520756 gtttaagctcaattaagcaaattttaattttgcaagaactaaaaatatgtgttggtccct 42520815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 45301107 - 45301169
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||| || || |||| |||||||||||||||||||||||||||| ||||||||    
T  45301107 gtttaagcacaattgagaaattttttattttacaaggactaaaagtatgtgttgatccctatt 45301169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 44300427 - 44300476
Alignment:
Q  47 aattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  44300427 aattaagcaaattttaattttacaagcactaaaagtatgtgttgatccct 44300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 3563430 - 3563485
Alignment:
Q  44 cacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  3563430 cacaattaaacaatttttaattttacatggactaaaagtatatgttggtccctatt 3563485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 3202047 - 3201993
Alignment:
Q  45 acaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||| || ||||||||||| |||||||||||||||||||| |||||||||    
T  3202047 acaattaagtaatttttaattttaaaaggactaaaagtatgtgttagtccctatt 3201993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 36145251 - 36145207
Alignment:
Q  128 ttccatggaccagttagtcaatatgttccaccatggatcaatttt 172  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||    
T  36145251 ttccatggaccagtttggcaatatgttccaccatggatcagtttt 36145207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 2430814 - 2430771
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  2430814 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 2430771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 7748947 - 7748916
Alignment:
Q  37 gtttaagcacaattaagcaaattttaatttta 68  Q
    ||||||||||||||||||||||||||||||||    
T  7748947 gtttaagcacaattaagcaaattttaatttta 7748916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 20505498 - 20505455
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  20505498 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 20505455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 45625349 - 45625492
Alignment:
Q  94 cctatttctttcttagtgtatttaggatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 193  Q
    |||||||||||||||||||||||||||   ||| ||||||||||||||| |||||||||||||||||||||| | |||||| ||||||||| ||||||||    
T  45625349 cctatttctttcttagtgtatttaggacaccttcttccatggaccagttggtcaatatgttccaccatggat-agttttattagattcttcaaaccatca 45625447  T
Q  194 gattaagcataccattggagttattgtgttacatttcacactata 238  Q
    |||||||||| |||||||||||||| |||| ||||||||| ||||    
T  45625448 gattaagcatcccattggagttattttgttgcatttcacattata 45625492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 30740508 - 30740571
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30740508 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctattt 30740571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 21202121 - 21202183
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21202121 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 21202183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 28642745 - 28642683
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28642745 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 28642683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 34651426 - 34651488
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34651426 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 34651488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 39035683 - 39035745
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39035683 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 39035745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 45986029 - 45986091
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45986029 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 45986091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 11620308 - 11620249
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11620308 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 11620249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 17314961 - 17314902
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17314961 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 17314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 36039782 - 36039841
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36039782 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 36039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 498999 - 498940
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  498999 gtttaaacacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 498940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 23023362 - 23023421
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23023362 gtttaagcacaattaagaaaattttaattttacaaggactaaaagtatgtgttggtccct 23023421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 24424118 - 24424175
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24424118 gtttaagcacaattaagcaaattttaattttacaagcactaaaagtatgtgttggtcc 24424175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 33772225 - 33772284
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  33772225 gtttaagcacaattaagtaaattttaattttacaaggaataaaagtatgtgttggtccct 33772284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 41098662 - 41098603
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  41098662 gtttaagcacaattaagcaaattttaattttacaaggattaaaagtatgtgtttgtccct 41098603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 47463419 - 47463481
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  47463419 gtttaagtacaattaagaaaattttaattttacaaggactaaaagtatgcgttggtccctatt 47463481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 14962395 - 14962456
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  14962395 tttaagcacaattgagcaaatttttattttgcaaggactaaaagtatgtgttggtccctatt 14962456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 15391867 - 15391928
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15391867 tttaagcacaattgagcaaatttttattttgcaaggactaaaagtatgtgttggtccctatt 15391928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 27428694 - 27428642
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtt 89  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27428694 gtttaagcacaattaaacaaattttaattttacaaggactaaaagtatgtgtt 27428642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 2510932 - 2510873
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  2510932 gtttaagcacaattaagaaaattttaatcttataaggactaaaagtatgtgttggtccct 2510873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 46157912 - 46157967
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  46157912 gtttaagcacaattaagcaaattttaattttacaaggactaaaggtatatgttggt 46157967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 47229410 - 47229465
Alignment:
Q  44 cacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  47229410 cacaattaagaaaattttaattttataaggactaaaagtatgtgttggtccctatt 47229465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 47784650 - 47784709
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  47784650 gtttaagaacaattaagcaaattttaattttacaaggactaaaactatgtgttagtccct 47784709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 23064706 - 23064649
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccc 95  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  23064706 tttaagcacaattaagccaattttaattttacaatgactaaaagtatgtgttgttccc 23064649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 42335360 - 42335417
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  42335360 gtttaagcacaattaagcaaattttaattttacaatgactaaaagtatatggtggtcc 42335417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 7207841 - 7207894
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttg 90  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  7207841 gtttaagcacagttaagcaaattttaattttacaagggctaaaattatgtgttg 7207894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 30740267 - 30740224
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||    
T  30740267 gtttaagcataattaaacaaattttaattttacagggactaaaa 30740224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 9104852 - 9104894
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||| | |||||| |||||||||||||||||||||||||||    
T  9104852 tttaagtataattaatcaaattttaattttacaaggactaaaa 9104894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 45986364 - 45986406
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||||||| |||||||||    
T  45986364 tttaagcataattaaacaaattttaattttacagggactaaaa 45986406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 7901360 - 7901408
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgt 86  Q
    |||||||| ||| || || ||||||||||||||| ||||||||||||||    
T  7901360 tttaagcataatcaaacacattttaattttacaaagactaaaagtatgt 7901408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 34095791 - 34095723
Alignment:
Q  170 tttataagattcttcgaaccatcagattaagcataccattggagttattgtgttacatttcacactata 238  Q
    ||||| ||||| || |||||||||||||||||||  || | | ||||||||||| | ||||||||||||    
T  34095791 tttattagattttttgaaccatcagattaagcatctcactagtgttattgtgttgcctttcacactata 34095723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 48224677 - 48224534
Alignment:
Q  94 cctatttctttcttagtgtatttaggatggcttattccatggaccagttagtcaatatgttccaccatggatcaattttataagattcttcgaaccatca 193  Q
    |||||||||||||||||||||||||||   ||| ||||||||||||||| |||||||||||||||||| ||| | |||||| ||||||||| ||||||||    
T  48224677 cctatttctttcttagtgtatttaggacaccttcttccatggaccagttggtcaatatgttccaccattgat-agttttattagattcttcaaaccatca 48224579  T
Q  194 gattaagcataccattggagttattgtgttacatttcacactata 238  Q
    |||||||||| | |||||||||||||| || ||||||||||||||    
T  48224578 gattaagcatccgattggagttattgtattgcatttcacactata 48224534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 2207433 - 2207495
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2207433 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 2207495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 4573914 - 4573976
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4573914 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 4573976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10658456 - 10658518
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10658456 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 10658518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 26451441 - 26451379
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26451441 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 26451379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 34075897 - 34075959
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34075897 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 34075959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 48723785 - 48723723
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48723785 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 48723723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 10372598 - 10372657
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10372598 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 10372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 14411194 - 14411135
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14411194 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 14411135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 26911008 - 26911067
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26911008 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 26911067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 46184689 - 46184630
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46184689 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 46184630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 48624103 - 48624162
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48624103 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 48624162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 4789201 - 4789139
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4789201 gtttaagcacaattaagcaaattttaattttacaagaactaaaagtatgtgttggtccctatt 4789139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 25136787 - 25136849
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25136787 gtttaagcacaattaagcaaattttaattttacaaagactaaaagtatgtgttggtccctatt 25136849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 45194729 - 45194671
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45194729 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 45194671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 4008648 - 4008707
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4008648 gtttaagcacaattaagcaaattttaattttacaaggactaaaactatgtgttggtccct 4008707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 7586786 - 7586845
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7586786 gtttaagcgcaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 7586845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 17964371 - 17964312
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17964371 gtttaagcacaattaagcaaattttaattttacaaggactaaaattatgtgttggtccct 17964312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 31861462 - 31861521
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31861462 gtttaagcacaattaagcaaattttaattttacaaggaataaaagtatgtgttggtccct 31861521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 43030554 - 43030495
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43030554 gtttaagcactattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 43030495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 52527102 - 52527043
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52527102 gtttaagcacagttaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 52527043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 52711133 - 52711074
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52711133 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtttgtccct 52711074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10382928 - 10382990
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  10382928 gtttaagcacaattaaacaaattttaattttacgaggactaaaagtatgtgttggtccctatt 10382990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 32037103 - 32037165
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32037103 gtttaagcaaaattaagcaaattttaattttacaaggactaaaaatatgtgttggtccctatt 32037165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 36796293 - 36796231
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  36796293 gtttaagcacaattaagcaaattttaatattacaaggactaaaagtatttgttggtccctatt 36796231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 46667877 - 46667815
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  46667877 gtttaagcacaattgagcaaatttttattttacaaggactaaaagtatgtgttggtccctatt 46667815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 31266802 - 31266859
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31266802 gtttaagcacaattaagaaaattttaattttacaaggactaaaagtatgtgttggtcc 31266859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 45717204 - 45717147
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45717204 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtttgtcc 45717147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 14421526 - 14421468
Alignment:
Q  40 taagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14421526 taagcacaattaagcaaattttaattttacaa-gactaaaagtatgtgttggtccctatt 14421468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 45336705 - 45336646
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45336705 gtttaaacacaattaagcaaattttaattttacaaagactaaaagtatgtgttggtccct 45336646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 26507864 - 26507806
Alignment:
Q  41 aagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  26507864 aagcacaattaagcaaattttatttttacaatgactaaaagtatgtgttggtccctatt 26507806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 27851137 - 27851199
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  27851137 gtttaagtacaattaagcaaattttaattttacaaggactaaaagtaggtgttggtccatatt 27851199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 36449352 - 36449414
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36449352 gtttaagcacaattgagcaaatttttattttacaaggactaaaaatatgtgttggtccctatt 36449414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 47632492 - 47632551
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  47632492 gtttaagcacaattaagaaaattttaatcttataaggactaaaagtatgtgttggtccct 47632551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 48468070 - 48468129
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  48468070 gtttaagcacaattaaacaaattataattttacaaggactagaagtatgtgttggtccct 48468129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 4647476 - 4647430
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagta 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4647476 gtttaagcacaattaagcaaattttaattttacaaggactaaaagta 4647430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10371422 - 10371484
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  10371422 gtttaagcataattaagtaaattttaattttacaaggtctaaaagtatgtgttggtctctatt 10371484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 4058063 - 4058006
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  4058063 gtttaagcacaattaagcaaattttaattttacaatgactaaaagtatatggtggtcc 4058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 10895995 - 10895938
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  10895995 gtttaagcacaattaaacaaattttaattttacaaggacaaaatgtatgtgttggtcc 10895938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 14743778 - 14743835
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  14743778 gtttaaccacaattaagcaaattttaattttacaagcactaaaaatatgtgttggtcc 14743835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 40723339 - 40723388
Alignment:
Q  40 taagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtt 89  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40723339 taagcacaattaagcaaattttaattttacaaggattaaaagtatgtgtt 40723388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 52760759 - 52760706
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttg 90  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  52760759 gtttaagcacaattaaacaaattttaattttacaaggacaaaaagtatgtgttg 52760706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 45583412 - 45583468
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  45583412 gtttaagcacaattaagcaaatttcaattttacaaggactaaaaatatatgttggtc 45583468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 7603977 - 7603919
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||    
T  7603977 tttaagcacaattaagcaaattctaattttaccaggactaaaaatatgcgttggtccct 7603919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 28254160 - 28254102
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||||    
T  28254160 tttaagcacaattaagtaaatttaaattttacacggaccaaaagtatgtgttggtccct 28254102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 9130528 - 9130485
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  9130528 gtttaagcacaattaagcaaattttaattttacaagaactaaaa 9130485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 48609701 - 48609752
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgt 88  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  48609701 gtttaagaacaattaagcaaattttaaatttacaaggactaatagtatgtgt 48609752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 45323519 - 45323473
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagta 83  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  45323519 gtttaagcgcaattaagcaaattttaattttacaaggattaaaagta 45323473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 7604221 - 7604264
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  7604221 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 7604264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 10371181 - 10371138
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||    
T  10371181 gtttaagcataattaaacaaattttaattttacagggactaaaa 10371138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 10896237 - 10896280
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  10896237 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 10896280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 35766499 - 35766534
Alignment:
Q  55 aaattttaattttacaaggactaaaagtatgtgttg 90  Q
    ||||||||||||||||||||||||||||||| ||||    
T  35766499 aaattttaattttacaaggactaaaagtatgcgttg 35766534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 14243839 - 14243881
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||| | |||||||||||||||||||||||||||    
T  14243839 tttaagcataatttaacaaattttaattttacaaggactaaaa 14243881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 28253900 - 28253858
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  28253900 tttaagcataattaaacaaattttaatttaacaaggactaaaa 28253858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 45336437 - 45336395
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  45336437 tttaagcataattaaacaaattttaatttaacaaggactaaaa 45336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 48468406 - 48468448
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  48468406 tttaagcataattaaacaaattttaatttaacaaggactaaaa 48468448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 24541690 - 24541752
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24541690 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 24541752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 16356202 - 16356261
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16356202 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 16356261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 35209396 - 35209455
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35209396 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 35209455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 11385821 - 11385759
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11385821 gtttaagcacaattaagcaaattttaattttacaaagactaaaagtatgtgttggtccctatt 11385759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 13083125 - 13083067
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13083125 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 13083067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19182789 - 19182851
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19182789 gtttaagcacaattaagcaaattttaattttacaaggaccaaaagtatgtgttggtccctatt 19182851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 22849743 - 22849681
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22849743 gtttaagcacaattaagcaaattttaattttacaatgactaaaagtatgtgttggtccctatt 22849681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 30378451 - 30378389
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30378451 gtttaagcacgattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 30378389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 32099029 - 32098967
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32099029 gtttaagcacaattaagcaaattttaattttacaaggaataaaagtatgtgttggtccctatt 32098967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 39106705 - 39106767
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39106705 gtttaagcacaattaaacaaattttaattttacaaggactaaaagtatgtgttggtccctatt 39106767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 16728950 - 16729007
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16728950 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 16729007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 42175037 - 42175094
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42175037 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 42175094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 12616741 - 12616681
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcccta 97  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12616741 gtttaagcacaattatgcaaattttaattttacaaggactaaaagtatgtgttggtcccta 12616681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 7420089 - 7420034
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7420089 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 7420034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 8076589 - 8076530
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8076589 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtcggtccct 8076530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 18365514 - 18365455
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18365514 gtttaagcgcaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 18365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 28174086 - 28174145
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28174086 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgcgttggtccct 28174145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 36052178 - 36052119
Alignment:
Q  40 taagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36052178 taagcacaattaagcaaattttaattttataaggactaaaagtatgtgttggtccctatt 36052119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 41315268 - 41315327
Alignment:
Q  40 taagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41315268 taagcacaattaagcaaattttaattttacaaagactaaaagtatgtgttggtccctatt 41315327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 42219160 - 42219215
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42219160 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 42219215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 4137243 - 4137181
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  4137243 gtttaagcacaattaagcaaattttaattttacaaggattaaaagtatgtgttgatccctatt 4137181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 36765855 - 36765793
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36765855 gtttaatcacaattaagcaaattttaattttacaagtactaaaagtatgtgttggtccctatt 36765793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 41725140 - 41725082
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41725140 tttaagcacaattaagcaaattttaattttacaagaactaaaagtatgtgttggtccct 41725082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 43470815 - 43470753
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  43470815 gtttaagcacaattaagcaaattttaattttacaaggactaaaactaggtgttggtccctatt 43470753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 27923967 - 27923907
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcccta 97  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27923967 gtttaagtacaattaagcaaattttaaatttacaaggactaaaagtatgtgttggtcccta 27923907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 13699764 - 13699705
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13699764 gtttaagcaaaattaagcaaattttaattttacaagaactaaaagtatgtgttggtccct 13699705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 24685727 - 24685668
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  24685727 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgagttagtccct 24685668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 34059019 - 34058960
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  34059019 gtttaagcacaattaaacaaattttaattttacaagaactaaaagtatgtgttggtccct 34058960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 42174385 - 42174326
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  42174385 gtttaagcacaattaaacaaattttaattttacaaggactaaaagtaggtgttggtccct 42174326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 34050426 - 34050488
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  34050426 gtttaagcacaattaagcaaattttaattttacgaggactaaaaatatgtgtcggtccctatt 34050488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 41219927 - 41219865
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  41219927 gtttaagcacaattatgcaaattttaattttacaaggactaaaagtatgttttggtctctatt 41219865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 30611299 - 30611351
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30611299 gtttaagcacaattaagcaaattttaattttacaaggactaaaaatatgtgtt 30611351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 2061234 - 2061175
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  2061234 gtttaagcgcaattaagaaaattttaattttacaaggactaatagtatgtgttggtccct 2061175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 45421715 - 45421656
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  45421715 gtttaagcacaattaaacaaattttaattttataaggactaaaagtatgtgtttgtccct 45421656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 41161883 - 41161821
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||||    
T  41161883 gtttaagcacaattaagtaaattttaatattacaaggattaaaagtatgtgttggtacctatt 41161821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 44090307 - 44090353
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagta 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44090307 gtttaagcacaattaagcaaattttaattttacaaggactaaaagta 44090353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 4517304 - 4517245
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||||    
T  4517304 gtttaagcacaattaagaaaattttaatcttataaggactaaaagtatgtgttgatccct 4517245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 17918647 - 17918705
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  17918647 tttaagcataattaagcaaactttaatttttcaaggactaaaagtatatgttggtccct 17918705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 45239873 - 45239824
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgt 86  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  45239873 gtttaagtacaattaaacaaattttaattttacaaggactaaaagtatgt 45239824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 12000379 - 12000328
Alignment:
Q  36 ggtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtg 87  Q
    ||||||||||||  ||| || |||| ||||||||||||||||||||||||||    
T  12000379 ggtttaagcacatctaaacatatttgaattttacaaggactaaaagtatgtg 12000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 27520150 - 27520193
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||    
T  27520150 gtttaagcataattaagcaaattttaatttaacagggactaaaa 27520193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 8076254 - 8076212
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  8076254 tttaagcataattaaacaaattttaatttaacaaggactaaaa 8076212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 17918982 - 17919024
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  17918982 tttaagcataattaaacaaattttaatttaacaaggactaaaa 17919024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 24685392 - 24685350
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||||||| |||||||||    
T  24685392 tttaagcataattaaacaaattttaattttacagggactaaaa 24685350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 7636940 - 7636969
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattt 66  Q
    ||||||||||||||||||||||||||||||    
T  7636940 gtttaagcacaattaagcaaattttaattt 7636969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 16355985 - 16355944
Alignment:
Q  39 ttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||| |||||| ||||||||||||| |||||||||||||    
T  16355985 ttaagcataattaaacaaattttaatttaacaaggactaaaa 16355944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 26447290 - 26447327
Alignment:
Q  55 aaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  26447290 aaattttaattttacaaggaataaatgtatgtgttggt 26447327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 13400535 - 13400473
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13400535 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 13400473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19692991 - 19693053
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19692991 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 19693053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 5359544 - 5359485
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5359544 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 5359485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 15054165 - 15054106
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15054165 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 15054106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 31279874 - 31279933
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31279874 gtttaagcacaattaagcaaattttaatttttcaaggactaaaagtatgtgttggtccct 31279933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 945696 - 945754
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  945696 tttaagcacaattaagtaaattttaattttacaaggactaaaagtatgtgttggtccct 945754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 22423329 - 22423276
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttg 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22423329 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttg 22423276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 33971252 - 33971313
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  33971252 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttaatccctatt 33971313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 30753627 - 30753685
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  30753627 gtttaagcacaattaagcaaattttaa-tttataaggactaaaagtatgtgttggtccct 30753685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 22007007 - 22007056
Alignment:
Q  47 aattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  22007007 aattaagcaaattttaattttacaagcactaaaagtatgtgttgatccct 22007056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 7855807 - 7855764
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  7855807 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 7855764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 13400200 - 13400158
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  13400200 tttaagcataattaaacaaattttaatttaacaaggactaaaa 13400158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 14711840 - 14711778
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14711840 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 14711778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 38983663 - 38983601
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38983663 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 38983601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 42992749 - 42992687
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42992749 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 42992687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 24089904 - 24089965
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24089904 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 24089965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 4034929 - 4034870
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4034929 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 4034870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 4123455 - 4123396
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4123455 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 4123396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 8980264 - 8980205
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980264 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 8980205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 25001124 - 25001065
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25001124 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 25001065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 6450398 - 6450336
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6450398 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttgatccctatt 6450336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19000431 - 19000493
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19000431 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccttatt 19000493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 7572828 - 7572885
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7572828 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 7572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 18404626 - 18404567
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18404626 gtttaagcataattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 18404567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 19928366 - 19928425
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19928366 gtttaagcacaattaagcaaattttaattttacagggactaaaagtatgtgttggtccct 19928425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 24334272 - 24334213
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24334272 gtttaagcacaattaagcaaattttaattttacacggactaaaagtatgtgttggtccct 24334213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 27189327 - 27189268
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27189327 gtttaagcacaattgagcaaattttaattttacaaggactaaaagtatgtgttggtccct 27189268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 27432302 - 27432361
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27432302 gtttaaacacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 27432361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 41907119 - 41907060
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41907119 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggaccct 41907060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 22671236 - 22671179
Alignment:
Q  39 ttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22671236 ttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtttgtccct 22671179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 7234359 - 7234415
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtc 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7234359 gtttaagcacaattaagcaaattttaattttacaaagactaaaagtatgtgttggtc 7234415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 796141 - 796082
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  796141 gtttaagcacaattaagcaagttttaattttacaaggactaaaagtatgtgtttgtccct 796082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 5597583 - 5597642
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  5597583 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgatgatccct 5597642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 8315408 - 8315467
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  8315408 gtttaagcacaattaagcaaattttaattttacaagaactaaaagtatgttttggtccct 8315467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 4291530 - 4291592
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  4291530 gtttaagtacaattaggcaaattttaattttacaaggactaaaagtatgtgttgatccctatt 4291592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 18740529 - 18740590
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18740529 gttttagcacaattaagcaaattttaattt-acaaggactaaaagtatgtgttggtccctatt 18740590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 34819174 - 34819115
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  34819174 gtttaagcacaattaagaaaattttaatcttataaggactaaaagtatgtgttggtccct 34819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 20453290 - 20453233
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  20453290 gtttaagcataattaagcaaattttaattttacaaagactaaaagtatgcgttggtcc 20453233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 36816645 - 36816593
Alignment:
Q  44 cacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  36816645 cacaattaagtaaattttaattttagaaggactaaaagtatgtgttggtccct 36816593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 22982244 - 22982185
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  22982244 gtttaagtacaaataagcaaattttaattttacaaggactaaaagtattcgttggtccct 22982185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 32299606 - 32299657
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtt 89  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  32299606 tttaagcacaattaaacaaattttaattttataaggactaaaagtatgtgtt 32299657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 33010666 - 33010607
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  33010666 gtttaagtacaaataagcaaattttaattttacaaggactaaaagtattcgttggtccct 33010607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 38265791 - 38265732
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  38265791 gtttaagtacaattaagcaaattttaattttacaaaaactaaaagtatgtgtttgtccct 38265732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 156091 - 156036
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    |||||||||||||||| |||||   |||||||||| ||||||||||||||||||||    
T  156091 gtttaagcacaattaaacaaatacaaattttacaacgactaaaagtatgtgttggt 156036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 18075956 - 18075901
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    |||||||||||||||| |||||   |||||||||| ||||||||||||||||||||    
T  18075956 gtttaagcacaattaaacaaatacaaattttacaacgactaaaagtatgtgttggt 18075901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 22671480 - 22671523
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  22671480 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 22671523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 19928701 - 19928743
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  19928701 tttaagcataattaaacaaattttaatttaacaaggactaaaa 19928743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 22981910 - 22981868
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  22981910 tttaagcataattaaacaaattttaatttaacaaggactaaaa 22981868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 869291 - 869353
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  869291 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 869353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 3078219 - 3078281
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3078219 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 3078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19006565 - 19006627
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19006565 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 19006627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 28055513 - 28055451
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28055513 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 28055451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 28065938 - 28065876
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28065938 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 28065876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 53328360 - 53328421
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53328360 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 53328421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 4993944 - 4994003
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4993944 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 4994003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 10182487 - 10182428
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10182487 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 10182428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 30663937 - 30663996
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30663937 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 30663996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 32245991 - 32245932
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32245991 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 32245932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 36777714 - 36777773
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36777714 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 36777773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 40127145 - 40127086
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40127145 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 40127086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 43729610 - 43729673
Alignment:
Q  36 ggtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43729610 ggtttaagcataattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 43729673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 53628834 - 53628893
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53628834 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 53628893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 53947405 - 53947464
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53947405 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 53947464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 55006412 - 55006353
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55006412 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 55006353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 24342513 - 24342575
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24342513 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatctgttggtccctatt 24342575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 50133784 - 50133722
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50133784 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtctctatt 50133722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 45454183 - 45454244
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45454183 tttaagcacaattaagcaaattttaattttacaaggactaagagtatgtgttggtccctatt 45454244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 50362237 - 50362293
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50362237 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtc 50362293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 16128378 - 16128437
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16128378 gtttaagcacaattaagcagattttaattttacaaggactaaaagtatgtgttggtccct 16128437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 30779011 - 30778952
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30779011 gtttaagcacaattaagcaaattttaattttacaagaactaaaagtatgtgttggtccct 30778952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 30786832 - 30786777
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30786832 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggt 30786777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 43127942 - 43127883
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43127942 gtttaagcacaattgagcaaattttaattttacaaggactaaaagtatgtgttggtccct 43127883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 48586130 - 48586071
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48586130 gtttaagcacaattaagcaaattttgattttacaaggactaaaagtatgtgttggtccct 48586071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 53657849 - 53657908
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  53657849 gtttaagcacaattaagcaaattttaattttacaaggactaaaattatgtgttggtccct 53657908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 4735630 - 4735692
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  4735630 gtttaagcacaattaagcaaattttaattttacaagaacaaaaagtatgtgttggtccctatt 4735692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 15491016 - 15490954
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15491016 gtttaaacacaattaagcaaattttaattttacaatgactaaaagtatgtgttggtccctatt 15490954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 34226287 - 34226225
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  34226287 gtttaagcacaattgagcaaatttttattttacaaggactaaaagtatgtgttggtccctatt 34226225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 34779571 - 34779509
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  34779571 gtttaagcacaattaaataaattttaattttacaaggactaaaagtatgtgttggtccctatt 34779509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 51324954 - 51324896
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51324954 tttaagcacaattaagtaaattttaattttacaaggactaaaagtatgtgttggtccct 51324896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 37125825 - 37125882
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37125825 gtttaagcacaattaagcaaattttaattttacaagaactaaaagtatgtgttggtcc 37125882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 16787337 - 16787393
Alignment:
Q  40 taagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16787337 taagcacaattaagcaaattttaattttacaaggactaaaagtatgtgtttgtccct 16787393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 19878242 - 19878294
Alignment:
Q  44 cacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19878242 cacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 19878294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 45344285 - 45344229
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtc 93  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45344285 gtttaagcataattaagcaaattttaattttacaaggactaaaagtatgtgttggtc 45344229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 31269432 - 31269491
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31269432 gtttaaacacaattaagcaaattttaattttacaaagactaaaagtatgtgttggtccct 31269491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 49612135 - 49612194
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49612135 gtttaaacacaatttagcaaattttaattttacaaggactaaaagtatgtgttggtccct 49612194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 47198846 - 47198908
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  47198846 gtttaagcacaattaagcaaattttaattttacaaggaccaaaaggatgtgttggcccctatt 47198908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 33390874 - 33390931
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtcc 94  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  33390874 gtttaagcacaattaagcaaattttaattttgcagggactaaaagtatgtgttggtcc 33390931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 1487208 - 1487149
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  1487208 gtttaagcacaattaagaaaattttaatcttataaggactaaaagtatgtgttggtccct 1487149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 25578239 - 25578298
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  25578239 gtttaagcacaattaaacaaattttaattttacaaggactaaaagtatgggtttgtccct 25578298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 42367593 - 42367652
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  42367593 gtttaagcacaattaaacaaattttaattttacaagaactaaaagtatgtgtttgtccct 42367652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 43660257 - 43660316
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  43660257 gtttaaacacaattaagcaaatattaattttagaaggactaaaagtatgtgttggtccct 43660316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 51368299 - 51368358
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  51368299 gtttaagcacaattaaacaaattttaattttacaagcactaaaagtatgtgttagtccct 51368358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 8339524 - 8339578
Alignment:
Q  42 agcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8339524 agcataattaagcaaattttaattttacacggactaaaagtatgtgttggtccct 8339578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 29166880 - 29166924
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaag 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29166880 gtttaagcacaattaagcaaattttaattttacaaggactaaaag 29166924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 16644470 - 16644529
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||    
T  16644470 gtttaagcacaactaagcaaattttaattttacaaggactaaaagtgtatgttgatccct 16644529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 23878433 - 23878495
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||| ||||||||||||||||||||| || ||||| ||||||||||||||| ||||||||    
T  23878433 gtttaagtacaattaagcaaattttaattataaaaggaataaaagtatgtgttgatccctatt 23878495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 50762870 - 50762808
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  50762870 gtttaaacaaaattaagcaaattttaattttactaggactaaaagtaggtgttggtccatatt 50762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 45009158 - 45009206
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatg 85  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  45009158 gtttaagcataattaagcaaaatttaattttacaaggactaaaagtatg 45009206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 23251925 - 23251884
Alignment:
Q  48 attaagcaaattttaattttacaaggactaaaagtatgtgtt 89  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  23251925 attaagaaaattttaattttacaaggactaaaagtatgtgtt 23251884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 53963640 - 53963597
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  53963640 gtttaagcataattaaacaaattttaatttaacaaggactaaaa 53963597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 53519969 - 53519923
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagta 83  Q
    ||||||||| |||||| ||| ||||||||||||| ||||||||||||    
T  53519969 gtttaagcataattaaacaacttttaattttacacggactaaaagta 53519923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 53629171 - 53629213
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    |||||||| |||||| ||||||||||||| |||||||||||||    
T  53629171 tttaagcataattaaacaaattttaatttaacaaggactaaaa 53629213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 17255 - 17193
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17255 gtttaagcacagttaagcaaattttaattttacaaggactaaaagtatgcgttggtccctatt 17193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 42302 - 42240
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  42302 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtattcgttggtccctatt 42240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 7125 - 7062
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccctattt 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||    
T  7125 gtttaagcacaattaatcaaaatttaattttacaaggactaaaagtatgtgttgatccctattt 7062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 7367 - 7410
Alignment:
Q  37 gtttaagcacaattaagcaaattttaattttacaaggactaaaa 80  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||    
T  7367 gtttaagcataattaaacaaattttaattttacagggactaaaa 7410  T

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Target: scaffold0011 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 235280 - 235338
Alignment:
Q  38 tttaagcacaattaagcaaattttaattttacaaggactaaaagtatgtgttggtccct 96  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  235280 tttaagcacaattaagcgaattttaattttacaaggactaaaagtatgcgatggtccct 235338  T

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