View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14194_low_22 (Length: 274)
Name: NF14194_low_22
Description: NF14194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14194_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 257
Target Start/End: Complemental strand, 23326555 - 23326314
Alignment:
| Q |
13 |
aatattactccaaatagccaaaaccaaaatgatttgcatcctagcgaacatactatacttccctacctaatactgtttcataatcataaaacagggggaa |
112 |
Q |
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| T |
23326555 |
aatattactccaaatagccaaaaccaaaatgatttgcatcctagcgaacaag---tacttccctacctaatactgtttcataatcataaaacagggggaa |
23326459 |
T |
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| Q |
113 |
ctttgtctttactaaaggtatttatgttgagttattgacatttaatatcaaagcgcgtaaacactaaacaaggattaaacaatttttgtgtaaacaagag |
212 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23326458 |
ctttgtctttacaaaaggtatttatgttgagttattgacatttaatatcaaagcgcgtaaacactaaacaaggattaaacaatttttgtgtaaacaagag |
23326359 |
T |
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| Q |
213 |
ttattttcatttaattttttaaggtgacggtgagagggaatatat |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23326358 |
ttattttcatttaattttttaaggtgacggtgagagggaatatat |
23326314 |
T |
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