View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14195_high_1 (Length: 403)
Name: NF14195_high_1
Description: NF14195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14195_high_1 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 1 - 403
Target Start/End: Original strand, 9092210 - 9092612
Alignment:
| Q |
1 |
aacttccttcttttgtagattaaccttgtgtgtagccattgatatatttttgtgttatggattttggcactattttgtacctccatggtggtgatacgta |
100 |
Q |
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| T |
9092210 |
aacttccttcttttgtagattaaccttgtgtgtagccattgatatatttttgtgttatggattttggcactgttttgtacctccatggtggtgatacgta |
9092309 |
T |
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| Q |
101 |
tattaacttgtgatctacttctcaggcatgatcattcctcaaaggaaatcgtagcaaaagaatgacgacgaagaatttgaaaataaattatttggagtat |
200 |
Q |
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| T |
9092310 |
tattaacttgtgatctacttctcaggcatgatcattcctcaaaggaaatcgtagcaaaagaatgacgacgaagaatttgaaaataaattatttggagtat |
9092409 |
T |
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| Q |
201 |
gatgccccaattaagtgggacacatacaattcatacattggacgaatgtgttgtcgtatgattcaactaataagtggttagaagtagttattagttagta |
300 |
Q |
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| T |
9092410 |
gatgccccaattaagtgggacacatacaattcatacattgaacgaatgtgttgtcgtatgattcaactaataagtggttagaagtagttattagttagta |
9092509 |
T |
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| Q |
301 |
actagtaactactatgtttgttaagagttagttagttggcttgttatacaagttacaaatcaaggatataaatacttatatcaatgtattatgtgaatta |
400 |
Q |
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| T |
9092510 |
actagtaactactatgtttgttaagagttagttagttggcttgttatacaagttacaaatcaaggatataaatacttatatcaatgtattatgtgaatta |
9092609 |
T |
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| Q |
401 |
ctc |
403 |
Q |
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| T |
9092610 |
ctc |
9092612 |
T |
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