View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14196_high_10 (Length: 463)
Name: NF14196_high_10
Description: NF14196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14196_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 424; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 17 - 452
Target Start/End: Original strand, 30769064 - 30769499
Alignment:
| Q |
17 |
agtaccttatccctaaatgtaagtgaaaggttaaattcaagtaaccctgcgacactttacttctatgagtatctagctaaattattttttctctatttcc |
116 |
Q |
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| T |
30769064 |
agtaccttatccctaaatgtaagtgaaaggttaaattcaagtaaccctgcgacactttacttctatgagtatctagctaaattattttttctctatttcc |
30769163 |
T |
|
| Q |
117 |
acttgtttagatccttgaaaacttacattggaatactaagagaaaagctggattgtactaaatacagcaaaaaacaagttgtaacaaactgtgagagatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30769164 |
acttgtttagatccttgaaaacttacattggaatactaagagaaaagctggattgtactaaatacagcaaaaaacaagttgtaacaaactgtgagagatt |
30769263 |
T |
|
| Q |
217 |
ctttatttgcatataaggtatctcattttcatttcatttcaaaggtaaagtcacatagaaagaggaaaaaagaataagtcacagttgaatctcaacttat |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30769264 |
ctttatttgcatataaggtatctcattttcatttcatttcaaaggtaaagtcacatagaaagaggaaaaaagaataagtcacagttgaatctcaacttat |
30769363 |
T |
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| Q |
317 |
aggaatatcaacttctatttactctgttcctcccctgttttcactctgctatttcccttgtactaactctgtttctcccctgttttcactctgcaccaaa |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30769364 |
aggaatatcaacttctatttactctgttcctcccctgttttcactctgctatttcccttgtactaactctgtttctcccctgttttcactctgcaccaaa |
30769463 |
T |
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| Q |
417 |
ctaagtagagtgatcagagactctattctgttctgt |
452 |
Q |
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||||| ||||||||||||||||| || ||||||||| |
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| T |
30769464 |
ctaagcagagtgatcagagactccatcctgttctgt |
30769499 |
T |
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