View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14196_high_26 (Length: 323)
Name: NF14196_high_26
Description: NF14196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14196_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 18 - 312
Target Start/End: Complemental strand, 36364469 - 36364173
Alignment:
| Q |
18 |
aataaaatttaatcgcaatacatatcttcaaaatgaaatttagtttacaaacaaatttaattgcccaagttaataaatctaataacctcaacctaggtga |
117 |
Q |
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| T |
36364469 |
aataaaatttaatcgcaatacatatcttcaaaatgaaatttagtttacaaacatatttaattgcccaagttaataaatctaataacctcaacct-----a |
36364375 |
T |
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| Q |
118 |
cacccaagataattaattg-----atacaatgcacacccaaataatggacttatcatcataaaactgtctaac--nnnnnnnnnnttattacaaagcaat |
210 |
Q |
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| T |
36364374 |
cacccaagataattaattgatacaatacaatgcacacccaaataatggacttatcgtcataaaactgtctaacaaaaaaaaataaaaattacaaagcaat |
36364275 |
T |
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| Q |
211 |
gaataaatcactgagttcagctcagccacttcccggcgccggaacgtcacggtaactcttcaaccccgccacggtaaacggaacatcataaactttcttc |
310 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36364274 |
gaataaatcactcagttcagctcagccacttcccggcgccggaacgtcacggtaactcttcaaccccgccacggtaaacggaacatcataaactttcttc |
36364175 |
T |
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