View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14196_high_34 (Length: 231)
Name: NF14196_high_34
Description: NF14196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14196_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 28465122 - 28465335
Alignment:
| Q |
1 |
aaataagcatggatttatcttgaccgaaaaaagtgagggattaatttgagtctctttagtagctaattttgannnnnnncaataaaagtgcgagggacta |
100 |
Q |
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| T |
28465122 |
aaataagcatggatttatcttgaccgaaaaaagtgagggattaatttgagtctctttagtagctaattttgatttttttcaataaaagtgcgagggacta |
28465221 |
T |
|
| Q |
101 |
attttgctcaaaaatgttatgcgtcaacaattttttccagggtccccnnnnnnncaaaannnnnnncccaaggtgacatagtaaccaacatgttagcacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |
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| T |
28465222 |
attttgctcaaaaatgttatgcgtcaacaattttttccagggtccccaaaaaaacaaattttttttcccaaggtaacatagtaaccaacatgttagcacc |
28465321 |
T |
|
| Q |
201 |
aatcggtcaaatat |
214 |
Q |
| |
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|||||||||||||| |
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| T |
28465322 |
aatcggtcaaatat |
28465335 |
T |
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