View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14196_high_7 (Length: 522)
Name: NF14196_high_7
Description: NF14196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14196_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 8 - 384
Target Start/End: Original strand, 697827 - 698222
Alignment:
| Q |
8 |
attatactaattccaaaatatatatggatatgattttatccaaaataaacattgcttcaacaaagattaaatgcactatttttattatctattgaaaaga |
107 |
Q |
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| T |
697827 |
attatactaatttcaaaatatatattgttatgattttatccaaaataaacattgcttcaacaaagattaaatgcactatttttattatctattgaaaa-- |
697924 |
T |
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| Q |
108 |
aaaacaaaatcaattgcaatagtttaaaaagtaattttgcattcgacatgattattaagaaaataattttaaaaaataaaatatcttacaaattaatatg |
207 |
Q |
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| T |
697925 |
-aaacaaaatcaattgcaatagtttaaaaagtaattttgcattcgacatgattattaagaaaataattttaaaaaataaattatcttacaacttaatatg |
698023 |
T |
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| Q |
208 |
tgttgagccg----------------------acatttatttgtgatacccaaaatcctgtgagatacatgaatgcatgaatcactattaactcttcaaa |
285 |
Q |
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| T |
698024 |
tgttgagccgacactacaagtaatgtataattacatttatttgtgatacccaaaatcccgtgggataaatgaatgcatgaatcactcttaactctttaaa |
698123 |
T |
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| Q |
286 |
ggtaaaatcaaacaaacagtaagttattttaaaataccaaattaatcaattacattttctttataatatctcgtttaaatttcattggctaacccaccc |
384 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
698124 |
ggtaaaatcaaacacacagtaagttattttaaaataccaaattaatcaattacattttctttataatatctcgtttaaatttcattggctaacccaccc |
698222 |
T |
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