View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14197_high_22 (Length: 225)
Name: NF14197_high_22
Description: NF14197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14197_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 208
Target Start/End: Complemental strand, 43817987 - 43817794
Alignment:
| Q |
15 |
aaaatatcatgttgatgaaaccaaaacgaagtaacaatccctttattgaatccaaataatcatatcttagttttcattatttctcatttctccaacatag |
114 |
Q |
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| T |
43817987 |
aaaatatcatgttgatgaaaccaaaacgaagtaacaatccctttattgaatccaaataatcatatcttagttttcattatttctcatttctccaacatag |
43817888 |
T |
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| Q |
115 |
aaaaaagaaacaccaatcatacatttcctaatctgatttgttttcattaaaaacgtgacgattagggaattgaaattgaaatagatacatagaa |
208 |
Q |
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| T |
43817887 |
aaaaaagaaacaccaatcattcatttcctaatctgatttgttttcattaaaaacgtgacgattagggaattgaaattgaaatagatacatagaa |
43817794 |
T |
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