View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14197_high_6 (Length: 402)

Name: NF14197_high_6
Description: NF14197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14197_high_6
NF14197_high_6
[»] chr2 (1 HSPs)
chr2 (95-391)||(41094625-41094921)


Alignment Details
Target: chr2 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 95 - 391
Target Start/End: Complemental strand, 41094921 - 41094625
Alignment:
Q  95 cgtacaagtttcatgcatgcatcctctgagctatctcatctcatgtttgcaccatctcctaagaatatctatgcaatttgacaaattcctaaacaacagt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41094921 cgtacaagtttcatgcatgcatcctctgagctatctcatctcatgtttgcaccatctcctaagaatatctatgcaatttgacaaattcctaaacaacagt 41094822  T
Q  195 agatatttggcatatggaagatttgtggatcttgtctaccaaaatggtacacggtggagcatgtatgccctagtagagaagtcaaacagctaatcatgac 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41094821 agatatttggcatatggaagatttgtggatcttgtctaccaaaatggtacacggtggagcatgtatgccctagtagagaagtcaaacagctaatcatgac 41094722  T
Q  295 gataactctcaaataaaatcccaaagccactctaccctaaaaagagcacatacggccttcccctccattctcctagattcctcaatattcaccctat 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41094721 gataactctcaaataaaatcccaaagccactctaccctaaaaagagcacatacggccttcccctccattctcctagattcctcaatactcaccctat 41094625  T

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