View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14197_low_3 (Length: 634)

Name: NF14197_low_3
Description: NF14197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14197_low_3
NF14197_low_3
[»] chr2 (22 HSPs)
chr2 (17-613)||(41933121-41933718)
chr2 (459-610)||(31452309-31452459)
chr2 (463-610)||(34904754-34904901)
chr2 (463-608)||(15505539-15505684)
chr2 (493-617)||(9448950-9449073)
chr2 (463-610)||(1334850-1334997)
chr2 (463-592)||(31017274-31017403)
chr2 (488-591)||(19890180-19890283)
chr2 (464-608)||(4762344-4762488)
chr2 (493-591)||(9173702-9173801)
chr2 (518-605)||(14295626-14295713)
chr2 (461-607)||(40789703-40789850)
chr2 (493-610)||(20064904-20065020)
chr2 (499-542)||(3655748-3655791)
chr2 (493-591)||(19514883-19514981)
chr2 (493-570)||(29239245-29239322)
chr2 (511-591)||(7673206-7673286)
chr2 (489-610)||(5524454-5524575)
chr2 (544-608)||(43228872-43228936)
chr2 (464-579)||(37993102-37993217)
chr2 (518-608)||(11944894-11944984)
chr2 (556-613)||(45076187-45076244)
[»] chr8 (26 HSPs)
chr8 (464-607)||(33013041-33013183)
chr8 (493-609)||(33949546-33949662)
chr8 (464-610)||(42636333-42636479)
chr8 (464-608)||(27801193-27801337)
chr8 (464-591)||(1369826-1369953)
chr8 (463-610)||(2258057-2258204)
chr8 (490-608)||(12684487-12684605)
chr8 (512-613)||(28207614-28207715)
chr8 (493-602)||(1135162-1135271)
chr8 (492-590)||(24695760-24695857)
chr8 (521-606)||(17081395-17081480)
chr8 (468-608)||(4384107-4384246)
chr8 (528-608)||(9024483-9024563)
chr8 (530-613)||(13028119-13028202)
chr8 (489-611)||(35901924-35902045)
chr8 (518-610)||(37813423-37813516)
chr8 (493-602)||(3146037-3146150)
chr8 (521-608)||(167868-167955)
chr8 (511-582)||(3520822-3520893)
chr8 (527-610)||(16723225-16723308)
chr8 (463-614)||(39691082-39691231)
chr8 (548-610)||(20279606-20279668)
chr8 (548-610)||(21066233-21066295)
chr8 (493-607)||(36355953-36356062)
chr8 (464-592)||(37427199-37427329)
chr8 (492-608)||(12829866-12829982)
[»] chr4 (35 HSPs)
chr4 (464-610)||(37138129-37138275)
chr4 (464-617)||(7852511-7852664)
chr4 (464-613)||(45900116-45900265)
chr4 (479-607)||(35777681-35777809)
chr4 (482-610)||(8297864-8297992)
chr4 (464-608)||(51834909-51835053)
chr4 (464-582)||(31429298-31429416)
chr4 (493-607)||(47995733-47995847)
chr4 (464-610)||(50341834-50341980)
chr4 (464-612)||(31174618-31174766)
chr4 (463-603)||(50426989-50427129)
chr4 (510-609)||(27953054-27953152)
chr4 (464-608)||(7444352-7444497)
chr4 (492-608)||(25115259-25115374)
chr4 (493-609)||(41462043-41462159)
chr4 (464-570)||(8261141-8261247)
chr4 (464-570)||(8274558-8274664)
chr4 (483-608)||(24175385-24175509)
chr4 (464-537)||(23605634-23605707)
chr4 (549-609)||(20394632-20394692)
chr4 (510-591)||(49084413-49084495)
chr4 (463-591)||(24229612-24229740)
chr4 (463-591)||(34391673-34391801)
chr4 (524-592)||(51736365-51736433)
chr4 (509-611)||(39195739-39195840)
chr4 (463-617)||(40252642-40252794)
chr4 (464-570)||(36702817-36702919)
chr4 (494-591)||(53014203-53014300)
chr4 (494-583)||(43969180-43969270)
chr4 (493-608)||(13585257-13585368)
chr4 (549-591)||(23605979-23606021)
chr4 (518-608)||(23689877-23689967)
chr4 (494-592)||(31690394-31690491)
chr4 (543-591)||(37440838-37440886)
chr4 (549-609)||(49400606-49400666)
[»] chr1 (30 HSPs)
chr1 (493-607)||(38748717-38748831)
chr1 (493-608)||(4851241-4851355)
chr1 (465-608)||(39914576-39914716)
chr1 (464-603)||(44829272-44829410)
chr1 (463-608)||(14746166-14746311)
chr1 (464-608)||(2864138-2864280)
chr1 (464-613)||(3982255-3982403)
chr1 (464-607)||(8794412-8794556)
chr1 (493-610)||(39150575-39150692)
chr1 (492-613)||(32562349-32562469)
chr1 (464-592)||(45640558-45640685)
chr1 (493-592)||(18432949-18433048)
chr1 (525-608)||(34232735-34232818)
chr1 (482-608)||(42791127-42791253)
chr1 (464-582)||(44329617-44329735)
chr1 (495-607)||(48022351-48022463)
chr1 (508-605)||(604442-604537)
chr1 (494-613)||(43397012-43397133)
chr1 (524-608)||(39156256-39156340)
chr1 (549-608)||(7212768-7212827)
chr1 (463-569)||(31889196-31889303)
chr1 (493-608)||(47187817-47187932)
chr1 (521-610)||(38491214-38491303)
chr1 (548-608)||(30822827-30822887)
chr1 (464-607)||(34409730-34409872)
chr1 (461-612)||(8365494-8365641)
chr1 (541-603)||(26327796-26327858)
chr1 (512-577)||(36563730-36563795)
chr1 (542-610)||(1048715-1048782)
chr1 (556-608)||(36621928-36621980)
[»] chr3 (18 HSPs)
chr3 (464-608)||(47638890-47639032)
chr3 (464-610)||(39551823-39551968)
chr3 (464-587)||(29083866-29083990)
chr3 (469-608)||(52249321-52249460)
chr3 (541-608)||(46093595-46093662)
chr3 (499-608)||(48180173-48180282)
chr3 (511-609)||(42846019-42846118)
chr3 (518-591)||(11132586-11132659)
chr3 (539-613)||(37708427-37708501)
chr3 (464-582)||(35177783-35177901)
chr3 (521-582)||(26143091-26143152)
chr3 (492-588)||(16662992-16663087)
chr3 (549-609)||(49362406-49362466)
chr3 (464-607)||(25753481-25753623)
chr3 (493-610)||(26900019-26900138)
chr3 (511-605)||(24791495-24791588)
chr3 (493-591)||(51351289-51351387)
chr3 (508-613)||(12086774-12086879)
[»] chr7 (25 HSPs)
chr7 (464-612)||(39320949-39321097)
chr7 (464-610)||(35731280-35731425)
chr7 (459-597)||(3692883-3693022)
chr7 (465-610)||(27123267-27123412)
chr7 (464-612)||(28663106-28663253)
chr7 (464-610)||(28770470-28770616)
chr7 (464-609)||(35496540-35496685)
chr7 (463-591)||(7653588-7653716)
chr7 (464-609)||(44537335-44537480)
chr7 (481-610)||(43224071-43224200)
chr7 (502-608)||(7968563-7968670)
chr7 (464-607)||(25886166-25886309)
chr7 (464-610)||(21727373-21727519)
chr7 (493-555)||(23015650-23015712)
chr7 (519-607)||(18801037-18801124)
chr7 (462-609)||(42936001-42936144)
chr7 (464-591)||(26239508-26239635)
chr7 (509-608)||(27337693-27337791)
chr7 (524-591)||(44592878-44592945)
chr7 (493-605)||(43234788-43234900)
chr7 (464-562)||(14651357-14651455)
chr7 (499-591)||(37158358-37158450)
chr7 (493-608)||(9718990-9719101)
chr7 (464-608)||(10031889-10032032)
chr7 (518-610)||(18926320-18926412)
[»] chr5 (24 HSPs)
chr5 (493-609)||(15720061-15720177)
chr5 (464-607)||(18229569-18229712)
chr5 (464-610)||(16667259-16667405)
chr5 (463-591)||(8221134-8221262)
chr5 (482-610)||(30501125-30501253)
chr5 (482-610)||(30541468-30541596)
chr5 (464-609)||(8208173-8208318)
chr5 (464-610)||(30104797-30104943)
chr5 (491-608)||(7719199-7719316)
chr5 (493-605)||(9276576-9276688)
chr5 (508-614)||(40530446-40530552)
chr5 (493-591)||(17692274-17692372)
chr5 (463-615)||(5815037-5815189)
chr5 (464-608)||(34899104-34899247)
chr5 (464-609)||(13480012-13480159)
chr5 (463-591)||(3140826-3140954)
chr5 (464-608)||(39558734-39558878)
chr5 (521-607)||(2918621-2918707)
chr5 (481-535)||(7968458-7968512)
chr5 (518-608)||(41583538-41583628)
chr5 (518-603)||(18963812-18963897)
chr5 (464-605)||(23117194-23117334)
chr5 (541-610)||(32017462-32017531)
chr5 (493-610)||(112482-112599)
[»] scaffold0036 (1 HSPs)
scaffold0036 (464-607)||(62492-62635)
[»] chr6 (21 HSPs)
chr6 (493-608)||(19293449-19293564)
chr6 (464-582)||(32823698-32823816)
chr6 (463-608)||(17215649-17215794)
chr6 (511-610)||(1840976-1841075)
chr6 (497-610)||(3766270-3766383)
chr6 (461-592)||(7421683-7421814)
chr6 (464-591)||(23399122-23399249)
chr6 (463-578)||(30801766-30801881)
chr6 (493-605)||(2864876-2864987)
chr6 (493-579)||(31855078-31855164)
chr6 (483-612)||(34231942-34232070)
chr6 (461-609)||(28874393-28874541)
chr6 (492-608)||(2692426-2692541)
chr6 (518-605)||(2884087-2884172)
chr6 (548-608)||(26669330-26669390)
chr6 (521-617)||(30739585-30739681)
chr6 (521-608)||(9762798-9762884)
chr6 (499-617)||(11720889-11720998)
chr6 (463-608)||(27778749-27778892)
chr6 (518-583)||(34921587-34921652)
chr6 (509-605)||(15588653-15588748)
[»] scaffold0268 (1 HSPs)
scaffold0268 (493-579)||(20245-20330)
[»] scaffold0003 (1 HSPs)
scaffold0003 (464-610)||(103616-103762)
[»] scaffold1444 (1 HSPs)
scaffold1444 (518-591)||(953-1026)
[»] scaffold0419 (1 HSPs)
scaffold0419 (461-609)||(1059-1207)
[»] scaffold0119 (1 HSPs)
scaffold0119 (548-608)||(1403-1463)
[»] scaffold0009 (1 HSPs)
scaffold0009 (518-608)||(189064-189154)


Alignment Details
Target: chr2 (Bit Score: 345; Significance: 0; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 17 - 613
Target Start/End: Complemental strand, 41933718 - 41933121
Alignment:
Q  17 tgtgtgtccatgtgtttatatggttaaattaagaggttaatatcatgagttagatttttatatgcatagtacacgtcatctagatagtacttggatgaca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |    
T  41933718 tgtgtgtccatgtgtttatatggttaaattaagaggttaatatcatgagttagatttttatatgcatagtacacgtcatctggatagcacttggatgata 41933619  T
Q  117 ttatggttgatgacattgattaattacagtgtcatagttgtnnnnnnnnnnnnnnnn--ctttgtgaaagagaagaaagaaagctacttgtaacatcaat 214  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||                  |||||||||||||||||||||||||||||||| ||||||||    
T  41933618 ttatggttggtgacattgatcaattacagtgttataattgtagagaaaaacaaaaaaaactttgtgaaagagaagaaagaaagctacttgtgacatcaat 41933519  T
Q  215 gtcaccaatattatcaaccacaatgtcattcaagcatttttccatatttttatattgaatcaaaataaattttctaaaattggcttataatattaagagt 314  Q
    ||||||||||||||||||||||||||||  |||||| |   ||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  41933518 gtcaccaatattatcaaccacaatgtcacacaagcaataccccagatttttatattgaattaaaataaattttataaaattggcttataatattatgagt 41933419  T
Q  315 atttccttttataaacttgttctagatcgtatatttatttaatgtgacttgtannnnnnncaatacacttctcatatccaacattacaaggaataataaa 414  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  41933418 atttccttttataaacttgttttagatcgtatatttatttaatgtgacttgtatttttctcaatacacttctcatatccaacattacaaggaataataaa 41933319  T
Q  415 tgaacggtctgaacgacagagtttaatactatgttaannnnnnnatgaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaag 514  Q
    ||||||| | |||||||||||||||||||||||||||       ||| ||||| |||||||||||| |||| ||| | |||||||||||||||||||||     
T  41933318 tgaacggcccgaacgacagagtttaatactatgttaa-ttttttatggaaaatattaacgagtgttcccggagcactctttaagcactttaattagtaaa 41933220  T
Q  515 ttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcg 613  Q
    || ||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |||| ||||    
T  41933219 ttttttataaaaagttgtttactgagtgcattgaaaattgtaatagttgactttttaaaagaataattgctaaatttgatatgtttaaacagtgtctcg 41933121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 31452309 - 31452459
Alignment:
Q  459 atgaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaat 558  Q
    |||| ||||||||||||||||| ||||  |||| |||||||||||||| ||||||||| || || |||||||||||| ||| |||||| |||||||||||    
T  31452309 atgagaaatgttaacgagtgttcccggaacattatttaagcactttaaatagtaagtttttaat-aaaagttgtgtattgaatgcattgaaaattgtaat 31452407  T
Q  559 agttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
     ||| ||||||| ||||||||||| ||||| |||  ||| ||||||| ||||    
T  31452408 tgttgactttttaaaagaataattactaaacttgggatgtttaaagactgcc 31452459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 463 - 610
Target Start/End: Original strand, 34904754 - 34904901
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||| |||||||| |||||| ||| | |||||||||||||| | ||||||| || ||||||| || |||| | | | ||||||||||||||||||||    
T  34904754 aaaatgtcaacgagtgcttccggagcactctttaagcactttaaattgtaagttattaatgaaaaattttgtattaaattcattaaaaattgtaatagtt 34904853  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
     | ||||| ||||||||||| |||||| ||| || |||||||||||||    
T  34904854 gattttttaaaagaataattactaaatatgagatacttaaagagtgcc 34904901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 463 - 608
Target Start/End: Complemental strand, 15505684 - 15505539
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||||||||| || | |||| | || || |||||||| |||||||||    ||||||||||||||| ||| || ||| |||||| ||||||||    
T  15505684 aaaatgttaacgagtgtctctgtggcactcttgaaacactttaaatagtaagtttggaatgaaaagttgtgtattgaatgtattgaaaattataatagtt 15505585  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
     |||||||||||||||||||  ||||||||| || |||||||||||    
T  15505584 tactttttgaaagaataattattaaatttgaaatacttaaagagtg 15505539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 493 - 617
Target Start/End: Original strand, 9448950 - 9449073
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    ||||| |||||||| | ||||||| || ||||||||||||||| ||| || ||| |||||| |||||||| | ||||| ||||||||||| |||||||||    
T  9448950 tttaaacactttaaatggtaagtttttaatgaaaagttgtgtattgaatgtattgaaaattataatagttga-tttttaaaagaataattactaaatttg 9449048  T
Q  593 atatgcttaaagagtgcctcgaaga 617  Q
    |  ||||||||||||||| ||||||    
T  9449049 agttgcttaaagagtgccccgaaga 9449073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 463 - 610
Target Start/End: Original strand, 1334850 - 1334997
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||||| |||  |||| ||| | |||||||||||||| |  |||||| || ||||||| |||| || ||| ||||||  ||||||||||||||    
T  1334850 aaaatgttaacgattgtccccggagcactctttaagcactttaaatgataagtttttaatgaaaaattgtatattgaatgcattggaaattgtaatagtt 1334949  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
     | ||||| |||||||||||  ||||||||  ||||||||||||||||    
T  1334950 gatttttttaaagaataattattaaatttgggatgcttaaagagtgcc 1334997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 463 - 592
Target Start/End: Original strand, 31017274 - 31017403
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||||||||  | ||||||||| |||||||||||||| |   ||||| || ||||||||||||||| | | |||||| ||||||  |||| ||    
T  31017274 aaaatgttaacgagtgccttcggggcattctttaagcactttaaatgaaaagtttttaatgaaaagttgtgtattaaatgcattgaaaattaaaatattt 31017373  T
Q  563 aactttttgaaagaataattgctaaatttg 592  Q
     ||||||| ||||||||||| |||||||||    
T  31017374 gacttttttaaagaataattactaaatttg 31017403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 591
Target Start/End: Original strand, 19890180 - 19890283
Alignment:
Q  488 cattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaa 587  Q
    |||| ||||||||||| || || |||||| || ||||||||||||||| | | ||||||  |||||||||||||| ||||||| ||||||||||| ||||    
T  19890180 cattctttaagcacttaaaataataagtttttaatgaaaagttgtgtattaaatgcattggaaattgtaatagttgactttttaaaagaataattactaa 19890279  T
Q  588 attt 591  Q
    ||||    
T  19890280 attt 19890283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 608
Target Start/End: Complemental strand, 4762488 - 4762344
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||| ||||   | |||| ||||||| |||||||| |||||| || || || |||| ||||||| ||| |||||| |||||| ||||||||     
T  4762488 aaatgttaacgaatgttcttgaggcactttttaatcactttaaatagtaaatttttaataaaaaattgtgtattgaatgcattgaaaattataatagttg 4762389  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||| | ||| ||||||| |||||||||  ||||||||| ||||    
T  4762388 actttataaaataataattactaaatttgggatgcttaaacagtg 4762344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 591
Target Start/End: Original strand, 9173702 - 9173801
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtact-gagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||| |||||||||||| ||||| |||||||||| ||||||| | || || ||| ||||||||||||||| | ||||| ||| ||||||||||||||||    
T  9173702 tttaaacactttaattagcaagttttttatgaaaaattgtgtatttgattgtattgaaaattgtaatagttgattttttaaaaaaataattgctaaattt 9173801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 605
Target Start/End: Complemental strand, 14295713 - 14295626
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaaga 605  Q
    ||||| |||||||||||| | | |||||| |||||||||||||||||| |||| ||||||||||| |||||||||  || ||||||||    
T  14295713 tttataaaaagttgtgtattcaatgcattgaaaattgtaatagttaaccttttaaaagaataattactaaatttgggattcttaaaga 14295626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 607
Target Start/End: Complemental strand, 40789850 - 40789703
Alignment:
Q  461 gaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatag 560  Q
    ||||||||||||||||||| ||  || || | ||||||  ||||||||| ||||||||||||||||| || | || |||||| ||| |||||| |||||     
T  40789850 gaaaaatgttaacgagtgtctctaggacactctttaagtgctttaattaataagttctttatgaaaaattatctattgagtgtattgaaaattataataa 40789751  T
Q  561 tt-aactttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    || |   |||| |||||||||||| |||||||| |||||| |||||||    
T  40789750 ttgataattttaaaagaataattgttaaatttggtatgctcaaagagt 40789703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 493 - 610
Target Start/End: Complemental strand, 20065020 - 20064904
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| ||| ||| | |||||||||| ||||||| | | | |||| ||||||||||||||| ||||||| ||||||||||| ||| ||||     
T  20065020 tttaagcactttaaatagaaaggt-tttatgaaaaattgtgtatttaatacattgaaaattgtaatagttgactttttaaaagaataattactatattta 20064922  T
Q  593 atatgcttaaagagtgcc 610  Q
      || |||||||||||||    
T  20064921 ggatccttaaagagtgcc 20064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 542
Target Start/End: Original strand, 3655748 - 3655791
Alignment:
Q  499 cactttaattagtaagttctttatgaaaagttgtgtactgagtg 542  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  3655748 cactttaattagtaagttctttatgaaaagttgtgtattgagtg 3655791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 493 - 591
Target Start/End: Complemental strand, 19514981 - 19514883
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||||||||||||| | ||||||| | ||||||||||||| || | | |||||| | |||| |||||||| ||||||  |||||||||||| |||||||    
T  19514981 tttaagcactttaaattgtaagttttatatgaaaagttgtatattcattgcattgataattataatagttgacttttaaaaagaataattgttaaattt 19514883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 570
Target Start/End: Original strand, 29239245 - 29239322
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaacttttt 570  Q
    ||||||||||||||||||||| |  || ||||||| | ||||| ||| |||||| ||||||||||||||| |||||||    
T  29239245 tttaagcactttaattagtaaatctttaatgaaaaatggtgtattgaatgcattgaaaattgtaatagttgacttttt 29239322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 511 - 591
Target Start/End: Complemental strand, 7673286 - 7673206
Alignment:
Q  511 taagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||||| | ||| |||||||||||||| | || ||| ||||||||||||||| ||||||  | ||||||||||||||||||    
T  7673286 taagttttatataaaaagttgtgtactaaatgtattgaaaattgtaatagttgacttttaaagagaataattgctaaattt 7673206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 610
Target Start/End: Complemental strand, 5524575 - 5524454
Alignment:
Q  489 attttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaa 588  Q
    |||| ||||||||||||| |||||| |  |  || |||||||||| | ||| |||||||||| |||||||| |||||||||  ||| ||||||| ||| |    
T  5524575 atttgttaagcactttaaatagtaaatcttaaataaaaagttgtgcattgaatgcattaaaagttgtaataattaacttttcaaaaaaataattactata 5524476  T
Q  589 tttgatatgcttaaagagtgcc 610  Q
    |||   ||||||||||| ||||    
T  5524475 tttaggatgcttaaagaatgcc 5524454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 608
Target Start/End: Original strand, 43228872 - 43228936
Alignment:
Q  544 attaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||||| ||||| |||||||||| || ||||||||||||||||| | || |||||| ||||    
T  43228872 attaaaaattataataattaactttttaaaggaataattgctaaattttagatccttaaaaagtg 43228936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 579
Target Start/End: Complemental strand, 37993217 - 37993102
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||| |||||| || |  ||||| ||||| || ||||| |||||| || || || |||| || |||| | | |||||| |||||||||||||||     
T  37993217 aaatgttaaagagtgtctctgaagcattctttaaacattttaaatagtaaatttttaataaaaaattatgtattaaatgcattgaaaattgtaatagttg 37993118  T
Q  564 actttttgaaagaata 579  Q
    | ||||||||||||||    
T  37993117 attttttgaaagaata 37993102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 608
Target Start/End: Original strand, 11944894 - 11944984
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||||||||||||| | | |||||| ||||||||||||||| || ||||  || ||||||| ||||| ||   || |||||||||||    
T  11944894 tttatgaaaagttgtgtattcaatgcattgaaaattgtaatagttgacattttttaaaaataattactaaaattaggatccttaaagagtg 11944984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 613
Target Start/End: Original strand, 45076187 - 45076244
Alignment:
Q  556 aatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcg 613  Q
    |||| |||||||||| |||||||||||||| | |||  |||| |||||||||||||||    
T  45076187 aatatttaacttttttaaagaataattgcttattttagtatgtttaaagagtgcctcg 45076244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 6e-42; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 464 - 607
Target Start/End: Complemental strand, 33013183 - 33013041
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| | || ||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||     
T  33013183 aaatgttaacgagtgct-cctgggcactctttaagcactttaattagtaagttctttatgaaaagttgtgtattgagtacattggaaattgtaatagttg 33013085  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||    
T  33013084 actttttaaaagaataattgttaaatttggtatgcttaaagagt 33013041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 493 - 609
Target Start/End: Original strand, 33949546 - 33949662
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||| | ||||| ||| |||| || ||||||||     
T  33949546 tttaaacactttaattagtaagttatttatgaaaagttgtgtattgagtgcatttgaaattgtaatagttgaatttttaaaacaatacttactaaattta 33949645  T
Q  593 atatgcttaaagagtgc 609  Q
    |||||||||||||||||    
T  33949646 atatgcttaaagagtgc 33949662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 42636333 - 42636479
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| | |||| ||| | |||||||||||||| | ||||||| || ||||||||||||||| | | ||||||  ||||||||||||||     
T  42636333 aaatgttaacgagtgctcccggagcactctttaagcactttaaatggtaagtttttaatgaaaagttgtgtattaaatgcattgtaaattgtaatagttg 42636432  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    |||||||  || ||||||| |||||||||  ||||||||||||||||    
T  42636433 acttttttgaataataattactaaatttgggatgcttaaagagtgcc 42636479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 464 - 608
Target Start/End: Original strand, 27801193 - 27801337
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| |   |||| | | |||||||||||||| ||||||||| || || |||||||||||| ||| |||||| |||||||||||||||     
T  27801193 aaatgttaacgagtgctcttggggtactctttaagcactttaaatagtaagtttttaataaaaagttgtgtaatgaatgcattgaaaattgtaatagttg 27801292  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||| ||||||||||| ||||||||   ||| ||||||||||    
T  27801293 actttttaaaagaataattactaaatttagaatgattaaagagtg 27801337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 464 - 591
Target Start/End: Original strand, 1369826 - 1369953
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||| |||| |||| || || | ||||||||||||||||| |||||| | ||||||||||| | || ||| ||||||  ||||||| ||||||     
T  1369826 aaatgttaacaagtgcttcctggacactctttaagcactttaattaataagttttatatgaaaagttatctattgaatgcattggaaattgtgatagttg 1369925  T
Q  564 actttttgaaagaataattgctaaattt 591  Q
    ||||||| ||||||||||||||||||||    
T  1369926 actttttaaaagaataattgctaaattt 1369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 463 - 610
Target Start/End: Original strand, 2258057 - 2258204
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||| ||||||   ||||| || | |||||||||||||| | ||||||| |  ||||||||||||||| | | | ||||||||||||||||  ||    
T  2258057 aaaatgttatcgagtgcacccgggacaatctttaagcactttaaatggtaagttttaaatgaaaagttgtgtattaaatacattaaaaattgtaatgatt 2258156  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    |||||||| |||||||||||  ||||||||  ||||||||||||||||    
T  2258157 aactttttaaaagaataattattaaatttgggatgcttaaagagtgcc 2258204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 490 - 608
Target Start/End: Original strand, 12684487 - 12684605
Alignment:
Q  490 ttttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaat 589  Q
    ||||||||||||||||| || ||| || || || ||||||| |||| ||| ||||||| |||||||||||||| | | |||||||||||||||  |||||    
T  12684487 ttttttaagcactttaaataataaatttttaattaaaagttttgtaatgaatgcattagaaattgtaatagttgattctttgaaagaataattattaaat 12684586  T
Q  590 ttgatatgcttaaagagtg 608  Q
    |||  ||||||||||||||    
T  12684587 ttggaatgcttaaagagtg 12684605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 512 - 613
Target Start/End: Complemental strand, 28207715 - 28207614
Alignment:
Q  512 aagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcct 611  Q
    ||||| || ||||||||||||||| ||| ||||||  |||||||||||||| ||||||| ||||||| |||| ||||||||  |||||||||||||| ||    
T  28207715 aagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttgactttttaaaagaattattgttaaatttgggatgcttaaagagtgtct 28207616  T
Q  612 cg 613  Q
    ||    
T  28207615 cg 28207614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 493 - 602
Target Start/End: Complemental strand, 1135271 - 1135162
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    ||||| |||||||| | ||||||| || | |||||||||| || ||| | |||| ||||||||||||||| ||||||| ||||||||||| ||||||| |    
T  1135271 tttaaacactttaaatggtaagtttttaaggaaaagttgtatattgaatacattgaaaattgtaatagttgactttttaaaagaataattactaaattcg 1135172  T
Q  593 atatgcttaa 602  Q
    | ||||||||    
T  1135171 agatgcttaa 1135162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 492 - 590
Target Start/End: Complemental strand, 24695857 - 24695760
Alignment:
Q  492 ttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatt 590  Q
    |||||| |||||||| ||||||||| || || |||||||||||| | | ||||||| |||||||||||||| ||||||| ||| ||||||| |||||||    
T  24695857 ttttaaacactttaaatagtaagtt-ttaataaaaagttgtgtattcactgcattagaaattgtaatagttgactttttaaaataataattactaaatt 24695760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 606
Target Start/End: Original strand, 17081395 - 17081480
Alignment:
Q  521 atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagag 606  Q
    ||||||||||||| | | | ||||||| |||||||||||||| ||||||| ||| |||||||||||||||||| || || ||||||    
T  17081395 atgaaaagttgtgcattcattgcattagaaattgtaatagttgacttttttaaaaaataattgctaaatttgagatcctcaaagag 17081480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 4384107 - 4384246
Alignment:
Q  468 gttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactt 567  Q
    |||||||||||||  |||| || | |||||||||||||| |  ||| || || |||||| |||||||| ||| ||||||  |||||||||||||| | ||    
T  4384107 gttaacgagtgttctcgggacactctttaagcactttaaatgataaatttttaatgaaa-gttgtgtattgaatgcattggaaattgtaatagttgattt 4384205  T
Q  568 tttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||| ||||||||||| ||||||||    |||||||||||||    
T  4384206 tttaaaagaataattactaaatttagggtgcttaaagagtg 4384246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 528 - 608
Target Start/End: Complemental strand, 9024563 - 9024483
Alignment:
Q  528 gttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||| | | ||||| |||||||||||||||| | ||||||||||||||||| ||||||||| | | |||||||||||    
T  9024563 gttgtgtatttaatgcataaaaaattgtaatagttgattttttgaaagaataattactaaatttggttttcttaaagagtg 9024483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 613
Target Start/End: Complemental strand, 13028202 - 13028119
Alignment:
Q  530 tgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcg 613  Q
    |||||| |||||||||| |||||||||||| |  | ||||| |||||||||||| |||||||   |||||||||||||||||||    
T  13028202 tgtgtattgagtgcattgaaaattgtaataatagattttttaaaagaataattgataaatttagaatgcttaaagagtgcctcg 13028119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 611
Target Start/End: Complemental strand, 35902045 - 35901924
Alignment:
Q  489 attttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaa 588  Q
    |||||||||||| ||||| || |||||| || |||||||||| |||| ||| ||||||  ||||||||||| || ||||||| ||| |||||||  ||||    
T  35902045 attttttaagcattttaaataataagtttttaatgaaaagttctgtattgaatgcattggaaattgtaataattgactttttaaaaaaataattattaaa 35901946  T
Q  589 tttgatatgcttaaagagtgcct 611  Q
    | | | |||||||| ||||||||    
T  35901945 tat-aaatgcttaaggagtgcct 35901924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 610
Target Start/End: Original strand, 37813423 - 37813516
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaac-tttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    |||||||||||||||||| | | ||||||  |||||||||| ||| || ||||| ||||||||||| |||||||||  || |||||||||||||    
T  37813423 tttatgaaaagttgtgtattcaatgcattggaaattgtaatggttgacttttttaaaagaataattactaaatttgggatccttaaagagtgcc 37813516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 602
Target Start/End: Complemental strand, 3146150 - 3146037
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtg----cattaaaaattgtaatagttaactttttgaaagaataattgctaaa 588  Q
    |||||||||||||| ||||||||| || |||||| | |||| | ||| ||    ||||  |||||||||||||||||||||| ||||||||||| |||||    
T  3146150 tttaagcactttaaatagtaagtttttaatgaaacggtgtgcattgaatgaatgcattggaaattgtaatagttaactttttaaaagaataattactaaa 3146051  T
Q  589 tttgatatgcttaa 602  Q
    | ||  ||||||||    
T  3146050 tatgggatgcttaa 3146037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 521 - 608
Target Start/End: Original strand, 167868 - 167955
Alignment:
Q  521 atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||||| |||| | | ||||||  ||||| |||||||| ||||||| |||||||||||  ||||||||| || |||||||||||    
T  167868 atgaaaagttatgtaataaatgcattggaaattataatagttgactttttaaaagaataatttttaaatttgagatacttaaagagtg 167955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 511 - 582
Target Start/End: Original strand, 3520822 - 3520893
Alignment:
Q  511 taagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataatt 582  Q
    |||||| || |||||||||| |||| ||| ||||||||||| |||||||||| | ||||| |||||||||||    
T  3520822 taagtttttaatgaaaagttatgtattgaatgcattaaaaactgtaatagttgattttttaaaagaataatt 3520893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 610
Target Start/End: Original strand, 16723225 - 16723308
Alignment:
Q  527 agttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||||  ||| || ||| ||||||||| ||||| | ||||| ||||||||||| | |||||||  ||||||||||||||||    
T  16723225 agttgtgtgttgaatgtattgaaaattgtattagttgattttttaaaagaataattacaaaatttgggatgcttaaagagtgcc 16723308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 614
Target Start/End: Original strand, 39691082 - 39691231
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||| ||||| ||||||  ||| |||||| |  |||| |||||| || |||||||||| ||||||| | | |||||| ||||||| | || ||    
T  39691082 aaaatgttaacaagtgtctccgggt-attctttaaggatcttaaatagtaattt-tttatgaaaatttgtgtattcaatgcattgaaaattgaactattt 39691179  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcga 614  Q
     ||||||| |||||||||||  | ||| ||  |||||||||||||| |||||    
T  39691180 gacttttttaaagaataattttttaatgtggaatgcttaaagagtgtctcga 39691231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 610
Target Start/End: Original strand, 20279606 - 20279668
Alignment:
Q  548 aaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| |||| || |||||||||||||||||||||| | |||   ||||||||||||||||    
T  20279606 aaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcc 20279668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 610
Target Start/End: Original strand, 21066233 - 21066295
Alignment:
Q  548 aaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| |||| || |||||||||||||||||||||| | |||   ||||||||||||||||    
T  21066233 aaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcc 21066295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 607
Target Start/End: Original strand, 36355953 - 36356062
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||| ||||||| | ||||||| || ||||||||||||||| | | ||||||| |||||| |||||     ||||| ||||||||||| || ||||||    
T  36355953 tttaagtactttaaatggtaagtttttaatgaaaagttgtgtattaaatgcattagaaattgcaatag-----tttttaaaagaataattacttaatttg 36356047  T
Q  593 atatgcttaaagagt 607  Q
      || ||||||||||    
T  36356048 ggattcttaaagagt 36356062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 592
Target Start/End: Complemental strand, 37427329 - 37427199
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||  |||||  || | |||||||||||||| | ||||| | || ||||||||||| ||| ||| | |||| |||||||||||| ||     
T  37427329 aaatgttaacgagtgcctccgga-cactctttaagcactttaaatggtaagattttaatgaaaagttgagtattgattacattgaaaattgtaataattg 37427231  T
Q  564 a---ctttttgaaagaataattgctaaatttg 592  Q
    |    ||||| ||||||||||| |||||||||    
T  37427230 atttttttttaaaagaataattactaaatttg 37427199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 608
Target Start/End: Original strand, 12829866 - 12829982
Alignment:
Q  492 ttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||||||||||||| | ||||||| || ||||||| || | || ||| ||||||   |||||||||| |  ||||||| ||| |||||||  |||||||    
T  12829866 ttttaagcactttaaatggtaagtttttaatgaaaaattatatattgaatgcattgttaattgtaataatagactttttaaaataataattattaaattt 12829965  T
Q  592 gatatgcttaaagagtg 608  Q
     | ||||||||| ||||    
T  12829966 tagatgcttaaaaagtg 12829982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 37138129 - 37138275
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| ||||||| || | |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||  ||||| ||||||||     
T  37138129 aaatgttaacgagtgcttccgggacactctttaagcaatttaattagaaagttctttatgaaaagttgtgtattgagtgcattggaaattataatagttg 37138228  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| |||||||| |||||||||||||| | |||||||||||||    
T  37138229 actttttaaaagaatagttgctaaatttgatttccttaaagagtgcc 37138275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 464 - 617
Target Start/End: Original strand, 7852511 - 7852664
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||| ||||||||||   |||||||| | |||||||||||||| ||||||||| || ||||||||||||||| | | |||||| ||||||||||||||||    
T  7852511 aaatattaacgagtgccaccggggcactctttaagcactttaaatagtaagtttttaatgaaaagttgtgtattaaatgcattgaaaattgtaatagtta 7852610  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcgaaga 617  Q
    | ||||| ||||||||||| ||||||||   |||||||||||||| ||||||||    
T  7852611 attttttaaaagaataattactaaatttaggatgcttaaagagtgtctcgaaga 7852664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 464 - 613
Target Start/End: Original strand, 45900116 - 45900265
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||   | |||||| | ||||||||||||||||||||||||   |||||||||||||||| ||| ||||||  ||||||| ||||||     
T  45900116 aaatgttaacgagtgccccgggggcactctttaagcactttaattagtaagtttcatatgaaaagttgtgtattgaatgcattggaaattgtgatagttg 45900215  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcg 613  Q
    ||||| | ||||||||||||||||||||   |||||||||||||||||||    
T  45900216 actttataaaagaataattgctaaatttaggatgcttaaagagtgcctcg 45900265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 479 - 607
Target Start/End: Original strand, 35777681 - 35777809
Alignment:
Q  479 tttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaat 578  Q
    |||| |||| ||| |||||||||||||| | ||||||| || ||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||    
T  35777681 tttctggggtattctttaagcactttaaatggtaagtttttaatgaaaagttgtgtattgaatgcattagaaattgtaatagttaactttttaaaagaat 35777780  T
Q  579 aattgctaaatttgatatgcttaaagagt 607  Q
    |||| |||||||||  ||| |||||||||    
T  35777781 aattactaaatttgggatggttaaagagt 35777809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 482 - 610
Target Start/End: Complemental strand, 8297992 - 8297864
Alignment:
Q  482 ccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataat 581  Q
    |||||||| | |||||||||||||| ||||||||| || ||||||| ||||||| ||| ||||||  ||||||||| |||| || |||| ||||||||||    
T  8297992 ccggggcaatctttaagcactttaaatagtaagtttttaatgaaaaattgtgtattgaatgcattggaaattgtaacagttgacattttaaaagaataat 8297893  T
Q  582 tgctaaatttgatatgcttaaagagtgcc 610  Q
    | |||||||||  ||||||||||||||||    
T  8297892 tactaaatttgggatgcttaaagagtgcc 8297864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 464 - 608
Target Start/End: Complemental strand, 51835053 - 51834909
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||||| ||| | || | ||||| |||||||| |||||| || || ||||||||||||||| | | ||||||  ||||| ||||||||     
T  51835053 aaatgttaacgagtgttcccgagacactctttaaacactttaaatagtaaatttttaatgaaaagttgtgtatttaatgcattggaaattataatagttg 51834954  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||| ||||||||||||||||||||   ||||||||||||||    
T  51834953 actttttaaaagaataattgctaaatttaggatgcttaaagagtg 51834909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 464 - 582
Target Start/End: Complemental strand, 31429416 - 31429298
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||| |||||| ||||  | ||||||||||||||||||||||||||||| |  ||||||||||||||| ||| ||||||  ||||||||||||||     
T  31429416 aaatgttatcgagtgcttccatgacattttttaagcactttaattagtaagttttaaatgaaaagttgtgtattgaatgcattggaaattgtaatagttg 31429317  T
Q  564 actttttgaaagaataatt 582  Q
    | ||||| |||||||||||    
T  31429316 attttttaaaagaataatt 31429298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 493 - 607
Target Start/End: Original strand, 47995733 - 47995847
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| | ||||||| || |||||||||| |||| ||| |||||| |||||||||||| |||||||||| ||||| ||||| ||||||||     
T  47995733 tttaagcactttaaattgtaagtttttaatgaaaagttatgtattgaatgcattgaaaattgtaataattaactttttaaaagagtaattactaaattta 47995832  T
Q  593 atatgcttaaagagt 607  Q
      |||||||||||||    
T  47995833 gaatgcttaaagagt 47995847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 50341834 - 50341980
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||| ||||||| ||||| | | |||||||||||||  |||||| || |  ||||||||||||||| ||| ||| ||  ||||||||||||||     
T  50341834 aaatgttaacaagtgttttcggggtactctttaagcactttatatagtaaattttaaatgaaaagttgtgtattgaatgcgttggaaattgtaatagttg 50341933  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| ||||||||||| |||||||||  ||||||| | ||||||    
T  50341934 actttttaaaagaataattactaaatttggaatgcttacaaagtgcc 50341980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 464 - 612
Target Start/End: Original strand, 31174618 - 31174766
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| ||| |||  ||| |||||  ||||||| |  ||| || || ||||||||||||||| ||| |  ||| |||||||||| |||||    
T  31174618 aaatgttaacgagtgcttctgggatattctttaaatactttaaatgataaatttttaatgaaaagttgtgtaatgaatatattgaaaattgtaacagtta 31174717  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcctc 612  Q
    ||||||| ||||||||||| | |||||| | ||||||||||||||||||    
T  31174718 actttttaaaagaataattacaaaattttagatgcttaaagagtgcctc 31174766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 463 - 603
Target Start/End: Complemental strand, 50427129 - 50426989
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||||||||   | | |||| | ||||| |||||||| |||||| || || ||||||||||||||  ||| ||||||  ||||||||||||||    
T  50427129 aaaatgttaacgagtgcccctgtggcactctttaaacactttaaatagtaaatttttaatgaaaagttgtgtgttgattgcattggaaattgtaatagtt 50427030  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaa 603  Q
     ||||||  ||||||||||| |||||||||| |||||||||    
T  50427029 gacttttcaaaagaataattactaaatttgagatgcttaaa 50426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 510 - 609
Target Start/End: Original strand, 27953054 - 27953152
Alignment:
Q  510 gtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    ||||||| || | ||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||| |||||||||||||||    
T  27953054 gtaagtttttaacgaaaagttgtgtattgaatgcattgaaaattgtaatagttaactttttaaaataataa-tactaaatttgagatgcttaaagagtgc 27953152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 608
Target Start/End: Original strand, 7444352 - 7444497
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| | ||| | || | ||||| |||||||| || |||||| || | ||||||||||||| ||| |||||| |||||||||||||||     
T  7444352 aaatgttaacgagtgctcccgagacactctttaaacactttaaatactaagtttttaaagaaaagttgtgtattgaatgcattgaaaattgtaatagttg 7444451  T
Q  564 ac-tttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    || ||||| |||| |||||| |||||||||  ||||||||| ||||    
T  7444452 acttttttaaaagtataattactaaatttgggatgcttaaaaagtg 7444497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 492 - 608
Target Start/End: Original strand, 25115259 - 25115374
Alignment:
Q  492 ttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||||| |||||||| ||||||||| ||||| |||||||||||| | | ||||||  |||||||||||||||||||||| ||| ||||||| ||||||||    
T  25115259 ttttaaacactttaaatagtaagtt-tttataaaaagttgtgtattcactgcattggaaattgtaatagttaactttttaaaataataattactaaattt 25115357  T
Q  592 gatatgcttaaagagtg 608  Q
       || |||||||||||    
T  25115358 tggattcttaaagagtg 25115374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 493 - 609
Target Start/End: Complemental strand, 41462159 - 41462043
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||| ||||| ||||||||| || ||||||| || |||| | | ||||| | |||||||||||||| ||||||| ||||||||||| |||||| |     
T  41462159 tttaagcattttaaatagtaagtttttaatgaaaaattatgtattaaatgcataagaaattgtaatagttgactttttaaaagaataattactaaatata 41462060  T
Q  593 atatgcttaaagagtgc 609  Q
    | |||||||||||||||    
T  41462059 aaatgcttaaagagtgc 41462043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 8261247 - 8261141
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| || |||||| | || ||||||||||| ||||||||| || |||||||||| |||| | | |||||| |||||||||| ||||     
T  8261247 aaatgttaacgagtgtctctggggcactcttcaagcactttaaatagtaagtttttaatgaaaagttatgtattaaatgcattgaaaattgtaacagttg 8261148  T
Q  564 acttttt 570  Q
    |||||||    
T  8261147 acttttt 8261141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 8274664 - 8274558
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| || |||||| | || ||||||||||| ||||||||| || |||||||||| |||| | | |||||| |||||||||| ||||     
T  8274664 aaatgttaacgagtgtctctggggcactcttcaagcactttaaatagtaagtttttaatgaaaagttatgtattaaatgcattgaaaattgtaacagttg 8274565  T
Q  564 acttttt 570  Q
    |||||||    
T  8274564 acttttt 8274558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 24175385 - 24175509
Alignment:
Q  483 cggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataatt 582  Q
    ||||||| | |||||||||||||| | ||||||| | || ||||||||||||| | | |||||| ||||||||||||||| || |||| |||||||| ||    
T  24175385 cggggcactctttaagcactttaaatggtaagttttgtacgaaaagttgtgtattaaatgcatttaaaattgtaatagtttac-ttttaaaagaatattt 24175483  T
Q  583 gctaaatttgatatgcttaaagagtg 608  Q
     ||||||||   ||||||||||||||    
T  24175484 actaaatttaggatgcttaaagagtg 24175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 23605634 - 23605707
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtact 537  Q
    |||||||||||||||| ||||||  | |||||||||||||||| | ||||||| || |||||||||||||||||    
T  23605634 aaatgttaacgagtgtctccgggatactttttaagcactttaaatggtaagtttttaatgaaaagttgtgtact 23605707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 609
Target Start/End: Complemental strand, 20394692 - 20394632
Alignment:
Q  549 aaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||  |||||||||||||||    
T  20394692 aaattgtaatagttcactttttaaaagaataattactaaatttgggatgcttaaagagtgc 20394632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 510 - 591
Target Start/End: Original strand, 49084413 - 49084495
Alignment:
Q  510 gtaagttctttatgaaaagttgtgtactgagtg-cattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||||| || ||||||||||||||| ||| |  |||| ||||||||||||||| ||||||| ||||||||||| ||||||||    
T  49084413 gtaagtttttaatgaaaagttgtgtattgaatttcattgaaaattgtaatagttgactttttaaaagaataattactaaattt 49084495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 591
Target Start/End: Original strand, 24229612 - 24229740
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||| ||| | ||| | || | |||||||||||||| ||  ||||| || ||||||| ||||||| | | |||||| |||||||| ||| ||    
T  24229612 aaaatgttaacgggtgctcccgagacactctttaagcactttaaataaaaagtttttaatgaaaaattgtgtattaaatgcattgaaaattgtgataatt 24229711  T
Q  563 aactttttgaaagaataattgctaaattt 591  Q
     ||||||  ||||||||||| ||||||||    
T  24229712 tacttttaaaaagaataattactaaattt 24229740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 591
Target Start/End: Original strand, 34391673 - 34391801
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||||||  || || || | | ||||| ||||| || ||||||||| || || |||||||||||| ||| ||||||  |||||||||||  |    
T  34391673 aaaatgttaacgagtactttcgaggtactctttaaacacttaaaatagtaagtttttaataaaaagttgtgtattgattgcattggaaattgtaataact 34391772  T
Q  563 aactttttgaaagaataattgctaaattt 591  Q
     ||||| | ||||||||||| ||||||||    
T  34391773 gactttataaaagaataattactaaattt 34391801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 524 - 592
Target Start/End: Complemental strand, 51736433 - 51736365
Alignment:
Q  524 aaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||| | | || ||| |||||| |||||||| ||||||| |||||||||||||||||||||    
T  51736433 aaaagttgtgtattcaatgtattgaaaattataatagttgactttttaaaagaataattgctaaatttg 51736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 611
Target Start/End: Original strand, 39195739 - 39195840
Alignment:
Q  509 agtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||| | |||||||||||||||| | | |||||| ||||||||||||||| || |||| ||| || || | |||||||| | || |||||||||||    
T  39195739 agtaagttttatatgaaaagttgtgtattcaatgcattgaaaattgtaatagttgacctttttaaa-aaaaaatactaaatttaagatccttaaagagtg 39195837  T
Q  609 cct 611  Q
    |||    
T  39195838 cct 39195840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 617
Target Start/End: Complemental strand, 40252794 - 40252642
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||||||||| ||||||||| |  ||||| ||||||| |||||| || |||||| ||||||||||| | | || ||| ||||||| ||   ||    
T  40252794 aaaatgttaacgagtgtctccggggcactggttaaggactttaaatagtaaatt-tttatg-aaagttgtgtaatcaatgtattgaaaattgaaaacttt 40252697  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcgaaga 617  Q
    ||| |||| ||| || |||| || ||||| ||||| |||||||||| | ||||||    
T  40252696 aacatttttaaataacaattacttaatttaatatgtttaaagagtgtcccgaaga 40252642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 36702919 - 36702817
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||   |||||| || | |||||||||||||||    ||||| || ||||||| ||||||| ||| |||||| |||||||||||| ||     
T  36702919 aaatgttaacgagttcctccgggacactctttaagcactttaat----aagtttttaatgaaaaattgtgtattgaatgcattgaaaattgtaataattg 36702824  T
Q  564 acttttt 570  Q
    |||||||    
T  36702823 acttttt 36702817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 591
Target Start/End: Original strand, 53014203 - 53014300
Alignment:
Q  494 ttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||||||||||| | ||| ||| || || |||||||||||| ||| || |||  |||||||||||||||| ||||| |||  |||||| ||||||||    
T  53014203 ttaagcactttaaatggtatgtttttaataaaaagttgtgtattgaatgtattggaaattgtaatagttaattttttaaaaagataattactaaattt 53014300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 583
Target Start/End: Original strand, 43969180 - 43969270
Alignment:
Q  494 ttaagcactttaattagtaagttcttt--atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattg 583  Q
    ||||||||||| ||||||||||| |||  || |||| |||| || |||||||||| ||||||||||||||| | ||||| ||| ||||||||    
T  43969180 ttaagcacttttattagtaagttttttttataaaaaattgtatattgagtgcattgaaaattgtaatagttga-tttttaaaaaaataattg 43969270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 608
Target Start/End: Original strand, 13585257 - 13585368
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| | ||||||| | ||||||||||| |||| ||| | |||| |||||||||| ||||    |||  ||| ||||||| ||||||||     
T  13585257 tttaagcactttaaatggtaagttttatatgaaaagttatgtaatgaatacattgaaaattgtaacagtt----tttgaaaataataatttctaaattta 13585352  T
Q  593 atatgcttaaagagtg 608  Q
      ||||||||||||||    
T  13585353 gaatgcttaaagagtg 13585368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 591
Target Start/End: Original strand, 23605979 - 23606021
Alignment:
Q  549 aaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  23605979 aaattgtaataattaactttttaaaagaataattactaaattt 23606021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 608
Target Start/End: Complemental strand, 23689967 - 23689877
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||||| |||||||| | | |  ||||||||||||| ||||| | ||||| ||||||||||| |||||||| | ||  ||||||||||    
T  23689967 tttatgaaatgttgtgtattcaataaattaaaaattgtattagttgattttttaaaagaataattactaaatttaaaatctttaaagagtg 23689877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 592
Target Start/End: Complemental strand, 31690491 - 31690394
Alignment:
Q  494 ttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||| |||||||| |||||| ||  ||||||||||||||||| | | |||||| ||||||| || |||| ||||||| ||| |||||||  ||||||||    
T  31690491 ttaaacactttaaatagtaaatttcttatgaaaagttgtgtattcaatgcattgaaaattgcaacagttgacttttt-aaataataattaataaatttg 31690394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 591
Target Start/End: Complemental strand, 37440886 - 37440838
Alignment:
Q  543 cattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||| ||||||||||||||| ||||||| ||| ||||||| ||||||||    
T  37440886 cattgaaaattgtaatagttgactttttaaaataataattactaaattt 37440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 609
Target Start/End: Complemental strand, 49400666 - 49400606
Alignment:
Q  549 aaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    |||||||||||||| | ||||| ||||||||||| ||||||||   ||||||||| |||||    
T  49400666 aaattgtaatagttgattttttaaaagaataattactaaatttaggatgcttaaatagtgc 49400606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 5e-39; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 493 - 607
Target Start/End: Original strand, 38748717 - 38748831
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||||| ||||||| ||||||||||| |||||||||    
T  38748717 tttaagcactttaattagtaagttatttatgaaaagttgtgtattgagtgcattgaaaattataatagttgactttttaaaagaataatttctaaatttg 38748816  T
Q  593 atatgcttaaagagt 607  Q
     ||||||||||||||    
T  38748817 gtatgcttaaagagt 38748831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 493 - 608
Target Start/End: Original strand, 4851241 - 4851355
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||  |||||||||||||| ||||||| |||||||||||  |||| |||    
T  4851241 tttaagcactttaattagtaagttctttatgaaaagttgggtagtaagtgcatttgaaattgtaatagttgacttttt-aaagaataatttttaaaattg 4851339  T
Q  593 atatgcttaaagagtg 608  Q
    | ||||||||||||||    
T  4851340 acatgcttaaagagtg 4851355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 465 - 608
Target Start/End: Original strand, 39914576 - 39914716
Alignment:
Q  465 aatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaa 564  Q
    ||||||||||||||  | ||| | ||| |||||||||||||||||||| ||| ||||| ||||||   ||| |||||||||| ||||||||||||||| |    
T  39914576 aatgttaacgagtgccttcggagtattatttaagcactttaattagtaggttttttattaaaagt---gtattgagtgcattgaaaattgtaatagttga 39914672  T
Q  565 ctttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||| |||||| ||||| |||||||| |||||||||||||||    
T  39914673 ctttttaaaagaacaattgttaaatttggtatgcttaaagagtg 39914716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 603
Target Start/End: Complemental strand, 44829410 - 44829272
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||| |||||||||||||||||| || | |||||| ||||||||  ||||||| || || |||||||||||| ||| || |||||||||||||||||||     
T  44829410 aaatattaacgagtgtttccgggacactctttaagtactttaatcggtaagtt-ttaataaaaagttgtgtattgaatgtattaaaaattgtaatagttg 44829312  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaa 603  Q
    || |||| ||||||||||| |||||||||  |||||||||    
T  44829311 acctttttaaagaataattactaaatttgggatgcttaaa 44829272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 463 - 608
Target Start/End: Original strand, 14746166 - 14746311
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||||||||   ||| |||| | || ||||||||||||||||||||||| |||||||||||||||| | |  ||||| |||||| ||| ||||    
T  14746166 aaaatgttaacgagtgcccccgaggcactcttcaagcactttaattagtaagttctatatgaaaagttgtgtattcatagcattgaaaattataacagtt 14746265  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
     | ||||| | | ||||||||||||||||| ||| |||||||||||    
T  14746266 gattttttaagaaaataattgctaaatttggtatacttaaagagtg 14746311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 464 - 608
Target Start/End: Complemental strand, 2864280 - 2864138
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||   |||| ||| | |||||||||||||| ||||||||| || ||||||||||||||| ||| ||||||  ||||||||||||||     
T  2864280 aaatgttaacgagtgcc-ccggagcactctttaagcactttaaatagtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttg 2864182  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||| ||||||||||| |||||| ||  ||| ||||||||||    
T  2864181 acttttt-aaagaataattcctaaatatgggatgtttaaagagtg 2864138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 613
Target Start/End: Complemental strand, 3982403 - 3982255
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| ||||| ||| | ||||| |||||||| |||||| || ||||| ||||||||| || | | ||||||| ||||| ||||||||     
T  3982403 aaatgttaacgagtgtctccggtgcactctttaaacactttaaatagtaaatt-tttattaaaagttgtctattcaatgcattataaattataatagttg 3982305  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcg 613  Q
    |||||||  || ||||||| |||||||||||||  |||||||||| ||||    
T  3982304 actttttctaaaaataattactaaatttgatatttttaaagagtgtctcg 3982255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 464 - 607
Target Start/End: Complemental strand, 8794556 - 8794412
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttcttt--atgaaaagttgtgtactgagtgcattaaaaattgtaatagt 561  Q
    |||||||||||||||| || | | || | |||||| |||||||||||||| || |||  || ||||||||||||  ||||||||| |||||| |||||||    
T  8794556 aaatgttaacgagtgtctcagag-caatctttaagtactttaattagtaaattttttttataaaaagttgtgtatggagtgcattgaaaattataatagt 8794458  T
Q  562 taactttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    | ||||||| ||||||||||| ||||||||   |||||||||||||    
T  8794457 tgactttttaaaagaataattactaaatttaggatgcttaaagagt 8794412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 493 - 610
Target Start/End: Complemental strand, 39150692 - 39150575
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| ||||||| | || ||||||| || |||| ||| ||||||  |||||||||||||| |||||||  |||||||||| ||||||||     
T  39150692 tttaagcactttaactagtaagattttaatgaaaatttatgtattgaatgcattgtaaattgtaatagttgactttttacaagaataattactaaattta 39150593  T
Q  593 atatgcttaaagagtgcc 610  Q
      ||||||||||||||||    
T  39150592 ggatgcttaaagagtgcc 39150575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 492 - 613
Target Start/End: Original strand, 32562349 - 32562469
Alignment:
Q  492 ttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||||| |||||||| ||||||||| ||||| |||| ||||||| | | |||||| ||||||||||||||| | ||||| ||| ||||||| ||||||||    
T  32562349 ttttaaacactttaaatagtaagtt-tttataaaaaattgtgtattcactgcattgaaaattgtaatagttgaatttttaaaataataattactaaattt 32562447  T
Q  592 gatatgcttaaagagtgcctcg 613  Q
     | || ||||||||||| ||||    
T  32562448 tagattcttaaagagtgtctcg 32562469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 592
Target Start/End: Complemental strand, 45640685 - 45640558
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||||  ||| | || | |||||||| ||||| ||||||||| || ||||||| ||||||| ||| |||||| |||||| ||||| ||     
T  45640685 aaatgttaacgagtgtccccgagacactctttaagcattttaaatagtaagtttttgatgaaaa-ttgtgtaatgaatgcattgaaaattataataattg 45640587  T
Q  564 actttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||||| ||  ||||||||    
T  45640586 actttttgaaagaatagttcttaaatttg 45640558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 592
Target Start/End: Original strand, 18432949 - 18433048
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||  ||||| || ||| ||||| |||||||||||| || ||| | ||||||||||||||| ||||||| |||| ||||||||||| |||||||||    
T  18432949 tttaagccgtttaaatattaaattcttaatgaaaagttgtatattgaatacattaaaaattgtaacagttaacattttaaaagaataattactaaatttg 18433048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 608
Target Start/End: Original strand, 34232735 - 34232818
Alignment:
Q  525 aaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||||||| |||  ||||| ||||||||||||||| ||||||| |||||||||||||||||||    ||||||||||||||    
T  34232735 aaagttgtgtattgaaagcattgaaaattgtaatagttgactttttaaaagaataattgctaaattaaggatgcttaaagagtg 34232818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 608
Target Start/End: Original strand, 42791127 - 42791253
Alignment:
Q  482 ccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataat 581  Q
    ||||| || |||||||| | ||||| |||||| || | ||| ||||| |||||| ||| |||||| ||||| || |||||| ||||||| ||| ||||||    
T  42791127 ccgggacactttttaagtattttaaatagtaaattttatataaaaagctgtgtattgaatgcatttaaaatagtgatagttgactttttaaaaaaataat 42791226  T
Q  582 tgctaaatttgatatgcttaaagagtg 608  Q
    || ||||||| | ||||||||||||||    
T  42791227 tgttaaatttaagatgcttaaagagtg 42791253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 582
Target Start/End: Complemental strand, 44329735 - 44329617
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||||||||  | |||| ||||| |||||||| ||| ||||| ||  | |||| || |||| ||| |||||| |||||| ||||||||     
T  44329735 aaatgttaacgagtgtttccacgacattctttaaacactttaaatagaaagtttttagtaaaaaattatgtattgaatgcattgaaaattataatagttg 44329636  T
Q  564 actttttgaaagaataatt 582  Q
    ||||||| |||||||||||    
T  44329635 actttttaaaagaataatt 44329617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 495 - 607
Target Start/End: Original strand, 48022351 - 48022463
Alignment:
Q  495 taagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgat 594  Q
    |||||| ||||| ||||||||| || || ||||  | |||| ||| |||||| ||||||| ||||||||||||||| ||| ||||||| |||||| ||      
T  48022351 taagcattttaaatagtaagtttttaataaaaaaatatgtattgaatgcattgaaaattgcaatagttaactttttaaaacaataattactaaatatggg 48022450  T
Q  595 atgcttaaagagt 607  Q
    |||||||||||||    
T  48022451 atgcttaaagagt 48022463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 508 - 605
Target Start/End: Original strand, 604442 - 604537
Alignment:
Q  508 tagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaaga 605  Q
    |||||||||||| ||||||| ||||||| ||||||||||  ||||| ||||| || ||||||| ||| |||  ||| |||||||| ||||||||||||    
T  604442 tagtaagttcttaatgaaaaattgtgtattgagtgcattggaaattataataattgactttttaaaataat--ttgttaaatttggtatgcttaaaga 604537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 613
Target Start/End: Original strand, 43397012 - 43397133
Alignment:
Q  494 ttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaa--gaataattgctaaattt 591  Q
    |||| |||||||| ||||||||| || ||||||||||||||| | | ||||||  ||||| |||||||| ||||||| |||    |||||| ||||||||    
T  43397012 ttaaacactttaaatagtaagtttttaatgaaaagttgtgtattaaatgcattggaaattataatagttgactttttaaaaatatataattactaaattt 43397111  T
Q  592 gatatgcttaaagagtgcctcg 613  Q
       |||||||||||||||||||    
T  43397112 aggatgcttaaagagtgcctcg 43397133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 524 - 608
Target Start/End: Complemental strand, 39156340 - 39156256
Alignment:
Q  524 aaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||| ||||||| ||| ||||||  |||||||| ||||| ||||||| ||||||||||| ||||||||   ||||||||||||||    
T  39156340 aaaaattgtgtattgaatgcattggaaattgtagtagttgactttttaaaagaataattactaaatttttgatgcttaaagagtg 39156256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 608
Target Start/End: Complemental strand, 7212827 - 7212768
Alignment:
Q  549 aaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||||| ||||||||||| |||| |||||| |||||||||| || |||||||||||    
T  7212827 aaattgtaattgttaactttttaaaagtataattactaaatttgagatacttaaagagtg 7212768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 569
Target Start/End: Complemental strand, 31889303 - 31889196
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatg-aaaagttgtgtactgagtgcattaaaaattgtaatagt 561  Q
    ||||||||||||||||||||  | ||| | |||||||| ||||| | ||||||| || ||| |||||||||||| | | ||||||| |||| ||||||||    
T  31889303 aaaatgttaacgagtgtttctagtgcactctttaagcattttaaatggtaagtttttaatgaaaaagttgtgtattaaatgcattagaaatcgtaatagt 31889204  T
Q  562 taactttt 569  Q
    | ||||||    
T  31889203 tgactttt 31889196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 493 - 608
Target Start/End: Original strand, 47187817 - 47187932
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    ||||| ||||| || | ||||||| || ||||||| || |||| ||| ||||||  ||||| |||||||| | ||||| || |||||||| |||||||||    
T  47187817 tttaaacacttaaaatggtaagtttttaatgaaaaattatgtattgaatgcattggaaattataatagttgattttttaaatgaataattactaaatttg 47187916  T
Q  593 atatgcttaaagagtg 608  Q
      ||||||||||||||    
T  47187917 ggatgcttaaagagtg 47187932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 521 - 610
Target Start/End: Complemental strand, 38491303 - 38491214
Alignment:
Q  521 atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| ||||||| ||| ||||||  |||||||||||||| ||||||| | | ||||||| |||||||||  || || ||||||||||    
T  38491303 atgaaaaattgtgtattgaatgcattgtaaattgtaatagttgactttttaacataataattactaaatttgggattctgaaagagtgcc 38491214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 608
Target Start/End: Original strand, 30822827 - 30822887
Alignment:
Q  548 aaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||| || |||||| ||||    
T  30822827 aaaattgtaataattaactttttaagagaataattactaaatttgaaatccttaaaaagtg 30822887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 607
Target Start/End: Complemental strand, 34409872 - 34409730
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| ||| ||| |||| |||| ||||||||| | ||||||| || |||||||  |||||| ||| ||||||  ||||| ||||| ||     
T  34409872 aaatgttaacgagtgcttctgggacattctttatgcactttaaatggtaagtttttaatgaaaa-atgtgtattgaatgcattggaaattataataattg 34409774  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    | |||   ||| || |||| |||||||| | |||||||||||||    
T  34409773 attttaaaaaaaaaaaattactaaatttaaaatgcttaaagagt 34409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 612
Target Start/End: Complemental strand, 8365641 - 8365494
Alignment:
Q  461 gaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatag 560  Q
    ||||||||||||||||| | ||||    ||| ||||| ||  |||| ||||||||| ||  |||||| |  |||| ||| |||||| || ||||||||||    
T  8365641 gaaaaatgttaacgagtttctccg----attctttaaacatgttaaatagtaagtttttattgaaaaatgatgtattgaatgcattgaagattgtaatag 8365546  T
Q  561 ttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctc 612  Q
    || | ||||| |||||||||||  |||||||   ||| ||||||||||||||    
T  8365545 ttgattttttaaaagaataattattaaatttaggatgtttaaagagtgcctc 8365494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 603
Target Start/End: Complemental strand, 26327858 - 26327796
Alignment:
Q  541 tgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaa 603  Q
    |||||| ||||||||||||||| | ||||| |||||||||||  ||||||||| ||| |||||    
T  26327858 tgcattgaaaattgtaatagtttagttttttaaagaataatttttaaatttgaaatgtttaaa 26327796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 36563795 - 36563730
Alignment:
Q  512 aagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaa 577  Q
    ||||| |||||||||| ||||||| | | |||||| |||||| |||||||| || |||||||||||    
T  36563795 aagttttttatgaaaaattgtgtatttaatgcattgaaaattataatagttgacgttttgaaagaa 36563730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 610
Target Start/End: Original strand, 1048715 - 1048782
Alignment:
Q  542 gcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||| ||||||| | || |||||||||| |||||||||||  | |||||| |||||||||||||||||    
T  1048715 gcattgaaaattgaactatttaacttttt-aaagaataattttttaatttggtatgcttaaagagtgcc 1048782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 608
Target Start/End: Complemental strand, 36621980 - 36621928
Alignment:
Q  556 aatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||| |||||||||| |||||||||||||| | ||||| ||| ||||||||||    
T  36621980 aatatttaacttttttaaagaataattgcttattttgaaatgtttaaagagtg 36621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 464 - 608
Target Start/End: Complemental strand, 47639032 - 47638890
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||| | || |||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  47639032 aaatgttaactaatgcttccggggcacttt--aagcattttaattagtaagttctttatgaaaaattgtgtattgagtgcattaaaaattgtaatagtta 47638935  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||| |||| ||||| | |||||||  |||||||||||||||    
T  47638934 actttttaaaagcataatagttaaatttagtatgcttaaagagtg 47638890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 39551823 - 39551968
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| || | ||| | | ||||| |||||||||||||||||||||||||||||||||| || |||||| ||| |||||||| ||||||     
T  39551823 aaatgttaacgagtgctttcagggtactctttaaacactttaattagtaagttctttatgaaaagttgtttattgagtgtattgaaaattgt-atagttg 39551921  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    | ||||| ||||||||||||||||||||| |||||||||| ||||||    
T  39551922 attttttaaaagaataattgctaaatttggtatgcttaaatagtgcc 39551968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 464 - 587
Target Start/End: Original strand, 29083866 - 29083990
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaat-tagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||||||  ||| ||  | | ||||||||||||||  ||||||||| ||  |||||||||||||| | | ||||||||||||||||||||||    
T  29083866 aaatgttaacgagtgcctccaggatactctttaagcactttaaaatagtaagtttttattgaaaagttgtgtattaaatgcattaaaaattgtaatagtt 29083965  T
Q  563 aactttttgaaagaataattgctaa 587  Q
    |||||||| ||||||||||| ||||    
T  29083966 aactttttaaaagaataattactaa 29083990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 608
Target Start/End: Complemental strand, 52249460 - 52249321
Alignment:
Q  469 ttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaacttt 568  Q
    |||||||||| | |||| ||| ||||||||||||||||||| |||||| ||||  ||||||||| || ||| |  |||| | ||||||||||||||||||    
T  52249460 ttaacgagtgctcccggagcactttttaagcactttaattaataagttatttaaaaaaagttgtatattgaatatattagagattgtaatagttaacttt 52249361  T
Q  569 ttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    || |||||||||||  |||||||  ||| |||||| ||||    
T  52249360 ttaaaagaataattattaaattttgtatacttaaaaagtg 52249321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 541 - 608
Target Start/End: Original strand, 46093595 - 46093662
Alignment:
Q  541 tgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||    
T  46093595 tgcataaaaaattgtaatagttaacttttttaaagaataattgctaaatttaatatcattaaagagtg 46093662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 499 - 608
Target Start/End: Original strand, 48180173 - 48180282
Alignment:
Q  499 cactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgc 598  Q
    |||||||| ||||||||| ||||||||| |||| |||   | ||||||  |||||||||||||| ||||||| |||||||||||| |||||| |  ||||    
T  48180173 cactttaaatagtaagttttttatgaaatgttgggtaaccaatgcattggaaattgtaatagttgactttttaaaagaataattgttaaattggggatgc 48180272  T
Q  599 ttaaagagtg 608  Q
    ||||||||||    
T  48180273 ttaaagagtg 48180282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 609
Target Start/End: Original strand, 42846019 - 42846118
Alignment:
Q  511 taagttctttatgaaaagttgtgtactgagtgca-ttaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    |||||| || ||||||||||||||| ||| |||| || ||||||| ||||||| ||||||| ||||||||||| ||||||||   |||||||||||||||    
T  42846019 taagtttttaatgaaaagttgtgtattgaatgcaattgaaaattgaaatagttgactttttcaaagaataattactaaatttaggatgcttaaagagtgc 42846118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 591
Target Start/End: Original strand, 11132586 - 11132659
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||| ||||||||| || | | | |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  11132586 tttataaaaagttgtttattcaatacattgaaaattgtaatagttaactttttgaaataataattgctaaattt 11132659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 613
Target Start/End: Complemental strand, 37708501 - 37708427
Alignment:
Q  539 agtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcg 613  Q
    |||||||| ||||||| |||  |||||||||| ||||| |||||||| | ||| |||||||||||||||||||||    
T  37708501 agtgcattgaaaattgaaatgtttaacttttttaaagactaattgcttattttaatatgcttaaagagtgcctcg 37708427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 582
Target Start/End: Original strand, 35177783 - 35177901
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||||| ||  |||||  |||||||||| || |||||| || || |  |||| |||| |||| | |||||| || ||| ||||| |||    
T  35177783 aaatgttaacgagtgttttcgaagcattcgttaagcacttaaaatagtaaatttttaagaaaaaattgtatactaaatgcattgaatattataatattta 35177882  T
Q  564 actttttgaaagaataatt 582  Q
    ||||||| |||||||||||    
T  35177883 actttttaaaagaataatt 35177901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 26143152 - 26143091
Alignment:
Q  521 atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataatt 582  Q
    ||||||| ||||||| | | |||||| ||||||||||||||| ||||||| |||||||||||    
T  26143152 atgaaaaattgtgtattaaatgcattcaaaattgtaatagttgactttttaaaagaataatt 26143091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 588
Target Start/End: Complemental strand, 16663087 - 16662992
Alignment:
Q  492 ttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaa 588  Q
    |||||| |||||||| || |||||| ||||| |||||||||||| | | ||||||   ||||||||||||| ||||||| ||| ||||||| |||||    
T  16663087 ttttaaacactttaaataataagtt-tttataaaaagttgtgtattcactgcattggtaattgtaatagttgactttttaaaataataattactaaa 16662992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 609
Target Start/End: Original strand, 49362406 - 49362466
Alignment:
Q  549 aaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    |||||||||||||||||||||| |||||||||||  ||||||||  ||| ||||| |||||    
T  49362406 aaattgtaatagttaactttttaaaagaataattattaaatttgggatgtttaaaaagtgc 49362466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 607
Target Start/End: Complemental strand, 25753623 - 25753481
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||| |||||||||   || | | ||||||||| || | ||||||||| |||||||||| || |||| | | |||||| ||| || ||| | ||     
T  25753623 aaatgttaatgagtgtttctatggtactctttaagcacctttaatagtaagtt-tttatgaaaatttatgtaattaatgcattgaaacttataacatttg 25753525  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||| |  ||||||| || ||||||||||||||||||||||||    
T  25753524 actttattgaagaatattttctaaatttgatatgcttaaagagt 25753481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 610
Target Start/End: Original strand, 26900019 - 26900138
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaac-tttttgaaagaataattgct-aaatt 590  Q
    ||||| |||||||| | |||| || | ||||||||||| |||| | | |||||| ||||||||||||||| || ||||| |||||||||||  | | |||    
T  26900019 tttaaacactttaaatggtaaattttatatgaaaagttatgtaataaatgcattgaaaattgtaatagttgacttttttaaaagaataatttttcacatt 26900118  T
Q  591 tgatatgcttaaagagtgcc 610  Q
    ||  ||||||||||||||||    
T  26900119 tgggatgcttaaagagtgcc 26900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 605
Target Start/End: Complemental strand, 24791588 - 24791495
Alignment:
Q  511 taagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaaga 605  Q
    |||||| || |||||||||| |||| ||| | |||| ||||||||||||||| ||||||| |||||||||   ||||||||   |||||||||||    
T  24791588 taagtttttaatgaaaagttatgtattgaatacattgaaaattgtaatagttgacttttt-aaagaataacgactaaatttatgatgcttaaaga 24791495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 591
Target Start/End: Complemental strand, 51351387 - 51351289
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||||||||||||  |||||||| || ||||||| ||||||| | | || |||  ||||| ||||| | |||||||| |||||||||||  |||||||    
T  51351387 tttaagcactttaaaaagtaagtttttaatgaaaaattgtgtattaaatgtattggaaattataatactaaactttttaaaagaataattattaaattt 51351289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 613
Target Start/End: Original strand, 12086774 - 12086879
Alignment:
Q  508 tagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||||||| || |||||||  |||||| ||| |||| | |||||| |||||| |  |||||  ||||||||||| |||||||||| ||| ||||| |||    
T  12086774 tagtaagtttttaatgaaaaaatgtgtattgaatgcactgaaaattataatagatgtcttttaaaaagaataattactaaatttgaaatgattaaaaagt 12086873  T
Q  608 gcctcg 613  Q
     |||||    
T  12086874 acctcg 12086879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 8e-38; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 464 - 612
Target Start/End: Original strand, 39320949 - 39321097
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| |  | | || | |||||||||||||||||||||||| ||||| |||||||||||| ||| | |||| |||||||||||||||     
T  39320949 aaatgttaacgagtgtctttgagacactctttaagcactttaattagtaagttttttattaaaagttgtgtattgaatacattgaaaattgtaatagttg 39321048  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcctc 612  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  39321049 actttttaaaagaataattgttaaatttggtatgcttaaagagtgcctc 39321097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 464 - 610
Target Start/End: Complemental strand, 35731425 - 35731280
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||   ||||| || | |||||||||||||||||||||||||||||| |||||||||||| | ||||||||  ||||||||||||||     
T  35731425 aaatgttaacgagtgcccccggg-cactctttaagcactttaattagtaagttctttataaaaagttgtgtattaagtgcattggaaattgtaatagttg 35731327  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| |||||||| ||| |||||||| |||||||||||||||||    
T  35731326 actttttaaaagaatagttgttaaatttggtatgcttaaagagtgcc 35731280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 459 - 597
Target Start/End: Complemental strand, 3693022 - 3692883
Alignment:
Q  459 atgaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttcttt-atgaaaagttgtgtactgagtgcattaaaaattgtaa 557  Q
    |||| |||||||||||||||||||||||||| | |||||| | ||||||||||||||| ||| ||||||| ||||||| ||||||||||  |||||||||    
T  3693022 atgagaaatgttaacgagtgtttccggggcactctttaagtattttaattagtaagtttttttatgaaaaattgtgtattgagtgcattggaaattgtaa 3692923  T
Q  558 tagttaactttttgaaagaataattgctaaatttgatatg 597  Q
    ||||| | ||||| ||||||||||||||||||||| ||||    
T  3692922 tagttgattttttaaaagaataattgctaaatttggtatg 3692883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 465 - 610
Target Start/End: Complemental strand, 27123412 - 27123267
Alignment:
Q  465 aatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaa 564  Q
    ||||||||||||||   |||||||| | |||||||||||||| | ||||||| || | ||||||||||||||| | ||||||  |||||||||||||| |    
T  27123412 aatgttaacgagtgcccccggggcactctttaagcactttaaatggtaagtttttaacgaaaagttgtgtacttaatgcattggaaattgtaatagttga 27123313  T
Q  565 ctttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    |||||| ||||||| ||| |||||||||  ||||||||||||||||    
T  27123312 ctttttaaaagaatgattactaaatttgggatgcttaaagagtgcc 27123267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 464 - 612
Target Start/End: Original strand, 28663106 - 28663253
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||| ||  ||||||||| | |||||||||||||| ||||||| | || ||||||| ||||||| ||| |||||| |||||||||||||||     
T  28663106 aaatgttaacgaatgcctccggggcactctttaagcactttaaatagtaaggttttaatgaaaaattgtgtattgaatgcattgaaaattgtaatagttg 28663205  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcctc 612  Q
    ||||||| ||||||||||| ||||| ||   ||||||||||||||||||    
T  28663206 actttttaaaagaataatt-ctaaagttatgatgcttaaagagtgcctc 28663253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 464 - 610
Target Start/End: Complemental strand, 28770616 - 28770470
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||  |||||  || | |||||||||| ||| ||||||||| || ||||||||||||||| ||| ||||||  ||||||||||||||     
T  28770616 aaatgttaacgagtgcctccggaacactctttaagcactctaaatagtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttg 28770517  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||  ||||||||||| |||| ||||  ||||||||||||||||    
T  28770516 acttttcaaaagaataattactaattttgggatgcttaaagagtgcc 28770470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 609
Target Start/End: Original strand, 35496540 - 35496685
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||   |||||||| | ||||| |||||||| | ||||||| || ||||||| ||||||| ||| |||||| |||||||||||||||     
T  35496540 aaatgttaacgagtgcccccggggcactctttaaacactttaaatggtaagtttttaatgaaaaattgtgtaatgaatgcattgaaaattgtaatagttg 35496639  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    ||||||| |||  ||| || ||||||||   |||||||||||||||    
T  35496640 actttttaaaaatatagttactaaattttggatgcttaaagagtgc 35496685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 463 - 591
Target Start/End: Complemental strand, 7653716 - 7653588
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||||||  | ||||| || | ||||||||||||||  |||||||| || ||||||||||||||| ||| || |||  ||||| ||||||||    
T  7653716 aaaatgttaacgagttctcccgggacactctttaagcactttaaaaagtaagtttttaatgaaaagttgtgtaatgaatgaattggaaattataatagtt 7653617  T
Q  563 aactttttgaaagaataattgctaaattt 591  Q
     ||||||| |||||||| |||||||||||    
T  7653616 gactttttaaaagaatagttgctaaattt 7653588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 609
Target Start/End: Complemental strand, 44537480 - 44537335
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||   |||||||| | |||||||||||||| ||||||||| || |||||||||| |||| |   | || |  ||||| ||||||||     
T  44537480 aaatgttaacgagtgcccccggggcactctttaagcactttaaatagtaagtttttaatgaaaagttatgtattatatacaatggaaattataatagttg 44537381  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||||||    
T  44537380 actttttaaaagaataattactaaatatgggatgcttaaagagtgc 44537335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 610
Target Start/End: Original strand, 43224071 - 43224200
Alignment:
Q  481 tccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataa 580  Q
    ||||||||||| |||||||||||||| ||| ||||| || ||||||||||||||| |   | ||||  ||||||||| |||| ||||||| |||||||||    
T  43224071 tccggggcattctttaagcactttaaatagcaagtttttaatgaaaagttgtgtattacatacattggaaattgtaacagttgactttttaaaagaataa 43224170  T
Q  581 ttgctaaatttgatatgcttaaagagtgcc 610  Q
    |  |||| |||   ||||||||||||||||    
T  43224171 tatctaattttaggatgcttaaagagtgcc 43224200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 608
Target Start/End: Original strand, 7968563 - 7968670
Alignment:
Q  502 tttaattagtaagttctt-tatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgctt 600  Q
    ||||||||||| ||| || ||| ||||||||||||  ||||||||||||| | ||||||||| | ||||| ||||||||||||||||||||   ||||||    
T  7968563 tttaattagtaggtttttatataaaaagttgtgtatagagtgcattaaaagtggtaatagttgattttttaaaagaataattgctaaatttatgatgctt 7968662  T
Q  601 aaagagtg 608  Q
    ||| ||||    
T  7968663 aaaaagtg 7968670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 464 - 607
Target Start/End: Complemental strand, 25886309 - 25886166
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||| ||||||||   || || | ||||| |||||||| | ||||||| | |||||||||||||||| | | || ||| |||||||||||||||     
T  25886309 aaatgttaatgagtgtttttaggacactctttaaacactttaaatggtaagttttatatgaaaagttgtgtattaaatgtattgaaaattgtaatagttg 25886210  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||| | | ||||||||| |||||||| | ||| |||||||||    
T  25886209 actttctaagagaataatttctaaatttaaaatgtttaaagagt 25886166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 21727373 - 21727519
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||  |  |||||| | ||||||||||| || |  |||||| || || || | ||||||| ||| || |||  ||||||||||||||     
T  21727373 aaatgttaacgagtgcctttggggcactctttaagcacttcaaatgataagtttttaataaatatttgtgtattgaatgtattggaaattgtaatagttg 21727472  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| ||||||||||| ||||||| || ||||||||||| ||||    
T  21727473 actttttaaaagaataattactaaattggagatgcttaaagaatgcc 21727519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 493 - 555
Target Start/End: Original strand, 23015650 - 23015712
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgt 555  Q
    |||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||    
T  23015650 tttaagaactttaattagtaagttttttatgaaaaattgtgtattgagtgcattataaattgt 23015712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 519 - 607
Target Start/End: Complemental strand, 18801124 - 18801037
Alignment:
Q  519 ttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||||||||||||||| | | || ||| ||||||||||||||| ||||||  ||||| |||||||||||||||| || ||||||||||    
T  18801124 ttatgaaaagttgtgtattcattgtattgaaaattgtaatagttgacttttgaaaagagtaattgctaaatttga-atccttaaagagt 18801037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 609
Target Start/End: Complemental strand, 42936144 - 42936001
Alignment:
Q  462 aaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagt 561  Q
    |||||||||||||||||||  ||||||||| ||||  |||||||| ||| ||||| || ||||||| ||||||| | | |||||| ||| ||||||||||    
T  42936144 aaaaatgttaacgagtgtt--cggggcattctttatacactttaaatagcaagtt-ttaatgaaaaattgtgtattaaatgcattgaaa-ttgtaatagt 42936049  T
Q  562 taactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    | | ||||| ||||||||||| |||  ||| | ||||||| |||||||    
T  42936048 tgattttttaaaagaataattactagttttaaaatgcttagagagtgc 42936001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 591
Target Start/End: Original strand, 26239508 - 26239635
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||| |||| |||  ||| | | ||||| |||||||| ||||||||| || ||||||| |||| || | | ||||||  ||| | |||  ||||    
T  26239508 aaatgttaacaagtgcttctagggtactctttaaacactttaaatagtaagtttttaatgaaaaattgtatattcaatgcattggaaactataaacgtta 26239607  T
Q  564 actttttgaaagaataattgctaaattt 591  Q
    ||||||||||||||||||||||||||||    
T  26239608 actttttgaaagaataattgctaaattt 26239635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 608
Target Start/End: Complemental strand, 27337791 - 27337693
Alignment:
Q  509 agtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    |||||||| |||||||||||||||||| | | || |||  ||| |||||||||| | ||||| |||||||||||| ||||||||| || |||||||||||    
T  27337791 agtaagttttttatgaaaagttgtgtatttaatgtattgtaaactgtaatagttgatttttttaaagaataattgttaaatttgagat-cttaaagagtg 27337693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 524 - 591
Target Start/End: Complemental strand, 44592945 - 44592878
Alignment:
Q  524 aaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||||||||||| ||| | |||| ||||||||||||||||||||||| |||||||||||  |||||||    
T  44592945 aaaagttgtgtattgaatacattgaaaattgtaatagttaactttttaaaagaataattattaaattt 44592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 605
Target Start/End: Complemental strand, 43234900 - 43234788
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| |||||| || || |||||||||| |||| ||| || | |  |||||||||||||| | ||||| ||||||||||| |||||| |     
T  43234900 tttaagcactttaaatagtaaatttttaatgaaaagttatgtattgaatgtaatggaaattgtaatagtttattttttaaaagaataattactaaatata 43234801  T
Q  593 atatgcttaaaga 605  Q
      |||||||||||    
T  43234800 ggatgcttaaaga 43234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 562
Target Start/End: Original strand, 14651357 - 14651455
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||||||    ||||||| | ||||||||||| || ||||| ||| || ||||||||||||||| ||| ||||||  ||||||||| ||||    
T  14651357 aaatgttaacgagtgccctcggggcactctttaagcacttaaaatagtaggtttttaatgaaaagttgtgtaatgattgcattggaaattgtaacagtt 14651455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 37158358 - 37158450
Alignment:
Q  499 cactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||||||| || ||| || ||||| |||| || |||| | | |||||| ||||||||||||||| ||||||| ||| ||||||| ||||||||    
T  37158358 cactttaaataataaattttttataaaaaattatgtattcactgcattgaaaattgtaatagttgactttttaaaataataattactaaattt 37158450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 608
Target Start/End: Original strand, 9718990 - 9719101
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| | ||||||| | ||||||||||| |||| ||| | |||| |||||||||| ||||    |||  ||| ||||||| ||||||||     
T  9718990 tttaagcactttaaatggtaagttttatatgaaaagttatgtaatgaatacattgaaaattgtaacagtt----tttgaaaataataatttctaaattta 9719085  T
Q  593 atatgcttaaagagtg 608  Q
      ||||||||||||||    
T  9719086 gaatgcttaaagagtg 9719101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 608
Target Start/End: Original strand, 10031889 - 10032032
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||| |||||||  |||||| | |||||| ||| ||| ||||| ||  ||||||||||  |||||| | | ||||||  |||| | || | |||    
T  10031889 aaatgttaacaagtgttttaggggcactctttaaggactataaatagtatgta-tttatgaaaaagtgtgtaatcaatgcattggaaatcgaaacattta 10031987  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||| ||| ||||||| |||| ||||  ||||||||||||||    
T  10031988 actttttaaaaaaataattactaattttggaatgcttaaagagtg 10032032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 610
Target Start/End: Complemental strand, 18926412 - 18926320
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    |||||||||||||||||| | | |||||| ||||||| | || || || |||| ||||||||||| |   |||| | ||||||||||||||||    
T  18926412 tttatgaaaagttgtgtattcaatgcattgaaaattgaactatttcacctttttaaagaataatttcatgatttaaaatgcttaaagagtgcc 18926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 5e-33; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 493 - 609
Target Start/End: Complemental strand, 15720177 - 15720061
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||  |||||||||||||| ||||||| |||||||||||| ||||||||    
T  15720177 tttaaacactttaattagtaagttctttatgaaaagttgtgtattaagttcattggaaattgtaatagttgactttttaaaagaataattgataaatttg 15720078  T
Q  593 atatgcttaaagagtgc 609  Q
     ||||||| ||||||||    
T  15720077 gtatgcttgaagagtgc 15720061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 464 - 607
Target Start/End: Original strand, 18229569 - 18229712
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| ||||||| || | |||||||||||||| | ||||||| || ||||||| |||| || ||| || |||  |||||||||||||||    
T  18229569 aaatgttaacgagtgcttccgggacactctttaagcactttaaatggtaagtttttaatgaaaaattgtttattgaatgtattggaaattgtaatagtta 18229668  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||||| ||||||||||| |||||||||  |||||||||||||    
T  18229669 actttttaaaagaataattactaaatttgggatgcttaaagagt 18229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 16667259 - 16667405
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| ||| |  || |||||||||||||||| ||||||||| || ||||||| ||||||| ||| || |||  ||||||||||| ||     
T  16667259 aaatgttaacgagtgtctccagaacactttttaagcactttaaatagtaagtttttaatgaaaaattgtgtattgaatgtattggaaattgtaataattg 16667358  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| |||||||||||  ||||||||  ||||||||||||||||    
T  16667359 actttttaaaagaataattattaaatttgtgatgcttaaagagtgcc 16667405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 463 - 591
Target Start/End: Complemental strand, 8221262 - 8221134
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||| |||||| ||||| ||||| |||||||| ||||| ||||||||| || || |||| ||||||| ||| |||||| ||| |||||||||||    
T  8221262 aaaatgttaatgagtgtctccggagcattctttaagcattttaaatagtaagtttttaataaaaaattgtgtattgaatgcattgaaagttgtaatagtt 8221163  T
Q  563 aactttttgaaagaataattgctaaattt 591  Q
     ||||||| | ||||||||||||||||||    
T  8221162 gactttttaagagaataattgctaaattt 8221134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 482 - 610
Target Start/End: Original strand, 30501125 - 30501253
Alignment:
Q  482 ccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataat 581  Q
    |||||||| || ||||||||||||| ||||||||| |  ||||||||||||||| ||| || |||  ||||||||||| || ||||||| ||||||||||    
T  30501125 ccggggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaataattgactttttaaaagaataat 30501224  T
Q  582 tgctaaatttgatatgcttaaagagtgcc 610  Q
    | |||||||||  ||||||||||||||||    
T  30501225 tactaaatttgggatgcttaaagagtgcc 30501253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 482 - 610
Target Start/End: Original strand, 30541468 - 30541596
Alignment:
Q  482 ccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataat 581  Q
    |||||||| || ||||||||||||| ||||||||| |  ||||||||||||||| ||| || |||  ||||||||||| || ||||||| ||||||||||    
T  30541468 ccggggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaataattgactttttaaaagaataat 30541567  T
Q  582 tgctaaatttgatatgcttaaagagtgcc 610  Q
    | |||||||||  ||||||||||||||||    
T  30541568 tactaaatttgggatgcttaaagagtgcc 30541596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 609
Target Start/End: Complemental strand, 8208318 - 8208173
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    ||||||||||||||| |||||| | | | ||||| ||| |||| |  |||||| | ||||||||||| |||| ||| ||||||||||||||||||| ||     
T  8208318 aaatgttaacgagtgcttccggagtactctttaaacacattaaatgataagttttatatgaaaagttatgtaatgaatgcattaaaaattgtaataattg 8208219  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    ||||||| |||||||||||   |||||| | |||||||||||||||    
T  8208218 actttttaaaagaataattttcaaatttaaaatgcttaaagagtgc 8208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 464 - 610
Target Start/End: Complemental strand, 30104943 - 30104797
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||| ||||   |||| ||| | ||||| |||||||| | ||||||| || ||||||||||||||| ||| ||||||  |||||||||| |||     
T  30104943 aaatgttaactagtgcccccggagcactctttaaacactttaagtggtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaattgttg 30104844  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| ||| |||| || |||||||||  ||||||||||||||||    
T  30104843 actttttaaaaaaatagttactaaatttgggatgcttaaagagtgcc 30104797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 491 - 608
Target Start/End: Complemental strand, 7719316 - 7719199
Alignment:
Q  491 tttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatt 590  Q
    |||||||||||||||| || |||||| || ||||||||||||||| ||| |  |||  |||||||||||||| | ||||| |||||||||||  |||||     
T  7719316 tttttaagcactttaaataataagtttttaatgaaaagttgtgtattgaatatattggaaattgtaatagttgattttttaaaagaataatttttaaata 7719217  T
Q  591 tgatatgcttaaagagtg 608  Q
    || |||||||||||||||    
T  7719216 tggtatgcttaaagagtg 7719199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 493 - 605
Target Start/End: Original strand, 9276576 - 9276688
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| ||||||||| || |||||||||| |||| ||| |||||| |||||| |||||||| | ||||| ||| ||||||| |||||||||    
T  9276576 tttaagcactttaaatagtaagtttttaatgaaaagttatgtattgaatgcattgaaaattataatagttgattttttaaaaaaataattactaaatttg 9276675  T
Q  593 atatgcttaaaga 605  Q
      |||||| ||||    
T  9276676 ggatgcttgaaga 9276688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 508 - 614
Target Start/End: Original strand, 40530446 - 40530552
Alignment:
Q  508 tagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||||||| || ||||| ||||||||| ||| || |||| ||||||| |||||||||||||| ||| ||||||| |||||| ||| ||| |||||||||    
T  40530446 tagtaagtttttaatgaatagttgtgtattgaatgaattagaaattgtgatagttaactttttaaaataataattactaaatatgagatgtttaaagagt 40530545  T
Q  608 gcctcga 614  Q
    | |||||    
T  40530546 gtctcga 40530552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 493 - 591
Target Start/End: Complemental strand, 17692372 - 17692274
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||||||||| || ||||| ||| || ||||||||||||||| | | |||||| |||||||||| |||| ||||||| | ||||||||| ||||||||    
T  17692372 tttaagcacttaaaatagtaggtttttaatgaaaagttgtgtagtaattgcattgaaaattgtaacagttgactttttaagagaataattactaaattt 17692274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 463 - 615
Target Start/End: Original strand, 5815037 - 5815189
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||||||| ||  |||||| | ||||||||||| ||  |||||||| || |||||||| ||| |  ||| || |||  |||||||  |||||    
T  5815037 aaaatgttaacgagtgcttttggggcactctttaagcacttaaagcagtaagtttttaatgaaaagatgtatgttgaatgtattggaaattgtggtagtt 5815136  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcgaa 615  Q
    || ||||| || |||||||| |||||||| |  ||||||||||||| ||||||    
T  5815137 aaatttttaaatgaataattactaaatttaaggtgcttaaagagtgtctcgaa 5815189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 608
Target Start/End: Original strand, 34899104 - 34899247
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||   || ||||| | ||||| |||||||| ||||||||| |  |||||||||| | || | | ||||||| ||||||||||| ||     
T  34899104 aaatgttaacgagtgca-ccagggcactctttaaacactttaaatagtaagttttaaatgaaaagttatatattaaatgcattagaaattgtaataattg 34899202  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
     |||||| ||||||||||| ||| |||||  ||||||||||||||    
T  34899203 tctttttaaaagaataattactatatttgggatgcttaaagagtg 34899247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 609
Target Start/End: Complemental strand, 13480159 - 13480012
Alignment:
Q  464 aaatgttaacgagtgtttccgggg-cattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||| ||| ||||||| | || | ||||| |||||||| || ||| || || || |||  ||||||| ||| |||||| |||||| ||||||||    
T  13480159 aaatgttaacaagtttttccggtgacactctttaaccactttaaataataaatttttaataaaatattgtgtattgaatgcattgaaaattataatagtt 13480060  T
Q  563 aactttttg-aaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    || |||||  ||| ||||||| |||||||||| |||||||||||||||    
T  13480059 aattttttttaaaaaataattactaaatttgaaatgcttaaagagtgc 13480012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 591
Target Start/End: Complemental strand, 3140954 - 3140826
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||| ||||||| ||||| ||   ||||| |||||||| || |||||| |  || ||||||||| || | | || ||| |||||||||||||||    
T  3140954 aaaatgttaatgagtgttcccgggacacactttaaacactttaaataataagttttaaataaaaagttgtatattaaatgaattgaaaattgtaatagtt 3140855  T
Q  563 aactttttgaaagaataattgctaaattt 591  Q
     ||||||| |||||||||||  |||||||    
T  3140854 gactttttaaaagaataattattaaattt 3140826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 608
Target Start/End: Original strand, 39558734 - 39558878
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| | ||| ||| || ||||||| ||||| ||||||||| ||  |||||||| |||||   | ||||||  ||||||||| ||||     
T  39558734 aaatgttaacgagtgtcttcggagcacttcttaagcattttaaatagtaagtttttattgaaaagtcgtgtatcaaatgcattggaaattgtaacagttg 39558833  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    | ||||| || |||||||| |||||| ||  || |||||||||||    
T  39558834 aatttttaaatgaataattactaaatatggaatacttaaagagtg 39558878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 607
Target Start/End: Original strand, 2918621 - 2918707
Alignment:
Q  521 atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||||||||||||| | | ||||||  ||||| |||||||| || |||| ||| |||||||  ||||||||| |||||||||||||    
T  2918621 atgaaaagttgtgtattaaatgcattggaaattataatagttgacatttttaaaaaataattattaaatttgaaatgcttaaagagt 2918707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 535
Target Start/End: Complemental strand, 7968512 - 7968458
Alignment:
Q  481 tccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgta 535  Q
    ||||||||| | |||||||||||||| ||||||||| || |||||||||||||||    
T  7968512 tccggggcactctttaagcactttaaatagtaagtttttaatgaaaagttgtgta 7968458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 518 - 608
Target Start/End: Complemental strand, 41583628 - 41583538
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||||||  |||||| | | ||||||  || |||||||| ||||||||||||| |||||||| |||||||||  || |||||||||||    
T  41583628 tttatgaaaatctgtgtattcaatgcattggaatttgtaatatttaactttttgaaggaataatttctaaatttgggatccttaaagagtg 41583538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 603
Target Start/End: Complemental strand, 18963897 - 18963812
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaa 603  Q
    ||||| |||| ||||||| | | |||||| ||||||||||||||||||||||   |||||||||| ||||||| || || ||||||    
T  18963897 tttataaaaaattgtgtatttaatgcattgaaaattgtaatagttaacttttctcaagaataattactaaattcgagattcttaaa 18963812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 605
Target Start/End: Original strand, 23117194 - 23117334
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||| ||||| ||||| || || ||||| ||||| || ||||| ||||||||| || ||||||| || |||| | | || |||  |||||||||| ||||    
T  23117194 aaatattaactagtgtctctggagcattctttaatcattttaaatagtaagtttttaatgaaaaattatgtattaaatgtattggaaattgtaattgtta 23117293  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaaga 605  Q
    |||||   ||||||||| |||||||||| | |||||||||||    
T  23117294 actttaa-aaagaataactgctaaatttaaaatgcttaaaga 23117334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 541 - 610
Target Start/End: Original strand, 32017462 - 32017531
Alignment:
Q  541 tgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    |||||| ||||||| |||| || ||||||| ||||||||||||||   ||||||||| ||||||||||||    
T  32017462 tgcattgaaaattgaaatattttacttttttaaagaataattgcttgttttgatatgtttaaagagtgcc 32017531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 610
Target Start/End: Original strand, 112482 - 112599
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||| ||  || || || ||||||| ||||||| | | | |||| |||||||||  |||| ||||||  ||||||||||| |||| |||     
T  112482 tttaagcactttaaataacaaatttttaatgaaaaattgtgtattaaatacattgaaaattgtatcagttgacttttcaaaagaataattactaatttta 112581  T
Q  593 atatgcttaaagagtgcc 610  Q
      ||||||||||||||||    
T  112582 tgatgcttaaagagtgcc 112599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 464 - 607
Target Start/End: Original strand, 62492 - 62635
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| ||||||| | | |||||||||||||| ||||||||| || || |||| || |||| ||| |||||| ||||| |||||||||     
T  62492 aaatgttaacgagtgtctccggggtactctttaagcactttaaatagtaagtttttaataaaaaattatgtattgaatgcattgaaaatcgtaatagttg 62591  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagt 607  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||||    
T  62592 actttttaaaagaataattactaaatatgagatgcttaaagagt 62635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 493 - 608
Target Start/End: Original strand, 19293449 - 19293564
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttg 592  Q
    |||||||||||||||||||| ||| ||||||||||||||  || |||||||||   |||||||||||||||||||||| ||| |||||||| |||||||     
T  19293449 tttaagcactttaattagtaggttttttatgaaaagttggttattgagtgcatcggaaattgtaatagttaactttttaaaataataattgttaaattta 19293548  T
Q  593 atatgcttaaagagtg 608  Q
      ||||||||||||||    
T  19293549 ggatgcttaaagagtg 19293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 464 - 582
Target Start/End: Complemental strand, 32823816 - 32823698
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||  ||||| ||| | |||||||||||||| ||  ||||| || ||||||||||||||| ||| |||||| |||||||||||| ||     
T  32823816 aaatgttaacgagtgcctccggagcactctttaagcactttaaataacaagtttttaatgaaaagttgtgtattgaatgcattgaaaattgtaataattg 32823717  T
Q  564 actttttgaaagaataatt 582  Q
    ||||||  |||||||||||    
T  32823716 acttttcaaaagaataatt 32823698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 463 - 608
Target Start/End: Original strand, 17215649 - 17215794
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    ||||||||||||||||  | |||  || | |||||||||||||| | ||||||| || || |||| |||| || ||| |||||| |||||||||||||||    
T  17215649 aaaatgttaacgagtgccttcggatcactctttaagcactttaaatggtaagtttttaataaaaaattgtttattgaatgcattgaaaattgtaatagtt 17215748  T
Q  563 aactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
     ||||||| ||| ||||||| |||||||| | ||||||||| ||||    
T  17215749 gactttttaaaaaaataattactaaattttaaatgcttaaaaagtg 17215794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 511 - 610
Target Start/End: Complemental strand, 1841075 - 1840976
Alignment:
Q  511 taagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    |||||| || || |||||||||||| ||| ||||||  |||||||||||||| | ||||| |||||||||||  ||||||| ||||||||||||||||||    
T  1841075 taagtttttaattaaaagttgtgtattgaatgcattggaaattgtaatagttgattttttaaaagaataattattaaatttaatatgcttaaagagtgcc 1840976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 610
Target Start/End: Complemental strand, 3766383 - 3766270
Alignment:
Q  497 agcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatat 596  Q
    |||||||||| |  |||||| | ||||||||||| |||| ||| || |||| ||||||||||| || ||||||| ||||||||||| | |||||||  ||    
T  3766383 agcactttaaatgataagttttatatgaaaagttatgtaatgaatgtattataaattgtaataattgactttttaaaagaataatttccaaatttgggat 3766284  T
Q  597 gcttaaagagtgcc 610  Q
    ||||||||||||||    
T  3766283 gcttaaagagtgcc 3766270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 461 - 592
Target Start/End: Complemental strand, 7421814 - 7421683
Alignment:
Q  461 gaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatag 560  Q
    |||||||||||||||||||| | | | || | |||||||||||||| ||||||  | ||  | |||||||||||| | | |||||| ||||||||||||     
T  7421814 gaaaaatgttaacgagtgttcctgtgacactctttaagcactttaaatagtaaagttttattaaaaagttgtgtattaaatgcattgaaaattgtaatat 7421715  T
Q  561 ttaactttttgaaagaataattgctaaatttg 592  Q
    || ||||||| ||  ||||||| |||||||||    
T  7421714 ttgactttttaaataaataattactaaatttg 7421683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 591
Target Start/End: Complemental strand, 23399249 - 23399122
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||||||||| ||||   || | |||||| ||||||| || |||||| | ||| ||||||| || |  || | |||| |||||| |||||||||    
T  23399249 aaatgttaacgagtgtctccgaaacactctttaagtactttaaatattaagttttatattaaaagttatgcaacgaatacattgaaaattataatagtta 23399150  T
Q  564 actttttgaaagaataattgctaaattt 591  Q
    ||||||| ||||||||||| ||||||||    
T  23399149 actttttaaaagaataatttctaaattt 23399122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 578
Target Start/End: Complemental strand, 30801881 - 30801766
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||||||    ||||| |||| |||||||||||||| ||| ||||| || || |||||||||||| ||| |||||| |||||| ||||| ||    
T  30801881 aaaatgttaacgagtacccccgggacattctttaagcactttaaatagcaagtttttaattaaaagttgtgtattgaatgcattgaaaattataatactt 30801782  T
Q  563 aactttttgaaagaat 578  Q
    | |||||  |||||||    
T  30801781 agcttttcaaaagaat 30801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 493 - 605
Target Start/End: Complemental strand, 2864987 - 2864876
Alignment:
Q  493 tttaagcactttaattagtaagttcttt-atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||| || ||||| | ||||||| ||| ||||||| ||||||| | | ||||||  |||||||||||||||  ||||||||| ||||||||||||||||    
T  2864987 tttaaacattttaaatggtaagttttttgatgaaaaattgtgtatttaatgcattgtaaattgtaatagtta--tttttgaaaaaataattgctaaattt 2864890  T
Q  592 gatatgcttaaaga 605  Q
    || || ||||||||    
T  2864889 gaaatccttaaaga 2864876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 493 - 579
Target Start/End: Complemental strand, 31855164 - 31855078
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaata 579  Q
    |||||||||||||| ||||||||| || ||||||| |||| || ||| ||||||  |||||||||||||| ||||||| ||| ||||    
T  31855164 tttaagcactttaaatagtaagtttttaatgaaaaattgtatattgaatgcattggaaattgtaatagttgactttttaaaataata 31855078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 612
Target Start/End: Original strand, 34231942 - 34232070
Alignment:
Q  483 cggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataatt 582  Q
    ||||||| | ||||||| |||||| | | |||||||| ||||||||||||||| | | | |||| ||||||| || |||||  ||||| |||||||||||    
T  34231942 cggggcactctttaagccctttaaat-gaaagttcttaatgaaaagttgtgtattaaatacattgaaaattgcaacagttattttttttaaagaataatt 34232040  T
Q  583 gctaaatttgatatgcttaaagagtgcctc 612  Q
      ||||||| | ||| ||||||||||||||    
T  34232041 attaaatttaagatggttaaagagtgcctc 34232070  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 609
Target Start/End: Complemental strand, 28874541 - 28874393
Alignment:
Q  461 gaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatag 560  Q
    ||||||||||||||||||  ||||||  ||| ||||| || ||||| ||  ||||| || ||||||| || |||| ||| ||||||  ||||| ||||||    
T  28874541 gaaaaatgttaacgagtgcctccgggatattctttaaacattttaaataacaagtttttaatgaaaaattttgtattgaatgcattggaaattataatag 28874442  T
Q  561 ttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    || | ||||  ||||||||||| |||| |||   |||||||||||||||    
T  28874441 ttgatttttcaaaagaataattactaattttatgatgcttaaagagtgc 28874393  T

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Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 608
Target Start/End: Original strand, 2692426 - 2692541
Alignment:
Q  492 ttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    |||||| |||||||| |||||| || || || |||||||||||| | | | ||||  |||||||||||||| ||||||| ||| ||||||| ||||||||    
T  2692426 ttttaaacactttaaatagtaaatt-ttaataaaaagttgtgtattcacttcattggaaattgtaatagttgactttttaaaataataattactaaattt 2692524  T
Q  592 gatatgcttaaagagtg 608  Q
       || |||||||||||    
T  2692525 tggattcttaaagagtg 2692541  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 518 - 605
Target Start/End: Complemental strand, 2884172 - 2884087
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaaga 605  Q
    |||||||||| ||||||| | | ||||||  |||||||||||||||  ||||||||| || ||||||||||||||  || ||||||||    
T  2884172 tttatgaaaaattgtgtatttaatgcattgtaaattgtaatagtta--tttttgaaaaaacaattgctaaatttggaatccttaaaga 2884087  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 608
Target Start/End: Original strand, 26669330 - 26669390
Alignment:
Q  548 aaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||||||||||| ||||||| |||||||||||  ||||| |||  |||||||||||||    
T  26669330 aaaattgtaatagttgactttttaaaagaataattattaaatatgaagtgcttaaagagtg 26669390  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 617
Target Start/End: Complemental strand, 30739681 - 30739585
Alignment:
Q  521 atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgcctcgaaga 617  Q
    ||||||| ||||||| ||| ||||||  |||| |||  |||||||||||| | ||||||||| ||||||||   || ||||||||||||| ||||||    
T  30739681 atgaaaaattgtgtattgaatgcattggaaatcgtaccagttaactttttaatagaataattactaaatttagaatacttaaagagtgccccgaaga 30739585  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 608
Target Start/End: Complemental strand, 9762884 - 9762798
Alignment:
Q  521 atgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||||||||||||||| || |||| ||||| ||||| || ||||||| |||||| || | |||||||| | ||| ||||||||||    
T  9762884 atgaaaagttgtgtactgaatgtattagaaattataataattgactttttaaaagaa-aaatactaaatttaagatgtttaaagagtg 9762798  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 617
Target Start/End: Original strand, 11720889 - 11720998
Alignment:
Q  499 cactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgc 598  Q
    ||||||||||||||| || | |||||||||||||||| |||         |||||||||||||| |||| || |||||||||||| |||||||   |||     
T  11720889 cactttaattagtaaattttgtatgaaaagttgtgtattga---------aaattgtaatagttgacttcttaaaagaataattgttaaatttaggatgt 11720979  T
Q  599 ttaaagagtgcctcgaaga 617  Q
    |||||||||| ||| ||||    
T  11720980 ttaaagagtgactcaaaga 11720998  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 608
Target Start/End: Complemental strand, 27778892 - 27778749
Alignment:
Q  463 aaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtt 562  Q
    |||||||||||| |||||||| | ||| | |||||||||||||| | |||| || ||||||||||  |||||| ||| |||||| |||||| |||| |||    
T  27778892 aaaatgttaacgtgtgtttcc-gagcactctttaagcactttaaatggtaaatt-tttatgaaaa-atgtgtattgaatgcattgaaaattataatcgtt 27778796  T
Q  563 aacttttt-gaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
     |||||||  ||| ||||||| ||||||||   || |||||||||||    
T  27778795 gactttttaaaaaaaataattactaaatttaggattcttaaagagtg 27778749  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 34921652 - 34921587
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattg 583  Q
    ||||||||||  |||||| | | |||||||||||||  |||| |||||||||| ||||||||||||    
T  34921652 tttatgaaaatgtgtgtattaattgcattaaaaattaaaatatttaacttttttaaagaataattg 34921587  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 15588748 - 15588653
Alignment:
Q  509 agtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaaga 605  Q
    |||||||| |||||||||| || |||| | | |||||| ||| |||||| | |||| ||||| |||||||| ||  |||||||||||| ||||||||    
T  15588748 agtaagtt-tttatgaaaaattatgtaatcaatgcattgaaatttgtaacatttaatttttttaaagaatattttataaatttgatatccttaaaga 15588653  T

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Target: scaffold0268 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 493 - 579
Target Start/End: Original strand, 20245 - 20330
Alignment:
Q  493 tttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaata 579  Q
    |||||||||||||| |  |||||| |||||||||||||||||| | | ||||||  |||||||||||||||||||||| ||||||||    
T  20245 tttaagcactttaaatgataagtt-tttatgaaaagttgtgtatttaatgcatttgaaattgtaatagttaactttttaaaagaata 20330  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 103616 - 103762
Alignment:
Q  464 aaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatagtta 563  Q
    |||||||||  ||||||||| | ||| | |||||||| || || || ||| || || ||||||| |||| || ||| ||||||||||||||||||| |      
T  103616 aaatgttaattagtgtttccagagcactctttaagcatttaaaataataaatttttaatgaaaaattgtatattgaatgcattaaaaattgtaatattcg 103715  T
Q  564 actttttgaaagaataattgctaaatttgatatgcttaaagagtgcc 610  Q
    ||||||| ||||||||||| ||||||   | ||||||||||||||||    
T  103716 actttttaaaagaataattactaaatcaaagatgcttaaagagtgcc 103762  T

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Target: scaffold1444 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 591
Target Start/End: Original strand, 953 - 1026
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaattt 591  Q
    ||||||||||| |||||| | | | |||| ||||||||||||||| ||||||| |||||| |||||||||||||    
T  953 tttatgaaaagatgtgtattcaatacattgaaaattgtaatagttgactttttaaaagaacaattgctaaattt 1026  T

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Target: scaffold0419 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 609
Target Start/End: Complemental strand, 1207 - 1059
Alignment:
Q  461 gaaaaatgttaacgagtgtttccggggcattttttaagcactttaattagtaagttctttatgaaaagttgtgtactgagtgcattaaaaattgtaatag 560  Q
    ||||||||||||||||||  ||||||  ||| ||||| || ||||| ||  ||||| || ||||||| || |||| ||| ||||||  ||||| ||||||    
T  1207 gaaaaatgttaacgagtgcctccgggatattctttaaacattttaaataacaagtttttaatgaaaaattttgtattgaatgcattggaaattataatag 1108  T
Q  561 ttaactttttgaaagaataattgctaaatttgatatgcttaaagagtgc 609  Q
    || | ||||  ||||||||||| |||| |||   |||||||||||||||    
T  1107 ttgatttttcaaaagaataattactaattttatgatgcttaaagagtgc 1059  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 608
Target Start/End: Complemental strand, 1463 - 1403
Alignment:
Q  548 aaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||||||||||| ||||||| |||||||||||  ||||| |||  |||||||||||||    
T  1463 aaaattgtaatagttgactttttaaaagaataattattaaatatgaagtgcttaaagagtg 1403  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 608
Target Start/End: Complemental strand, 189154 - 189064
Alignment:
Q  518 tttatgaaaagttgtgtactgagtgcattaaaaattgtaatagttaactttttgaaagaataattgctaaatttgatatgcttaaagagtg 608  Q
    ||||||||||  |||||| | | || |||| |||| | |||| |||||||||| |||||||||||||| | ||| | ||||||||||||||    
T  189154 tttatgaaaatatgtgtaattaatgtattagaaatagaaatatttaacttttttaaagaataattgcttattttaaaatgcttaaagagtg 189064  T

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