View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14197_low_5 (Length: 471)
Name: NF14197_low_5
Description: NF14197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14197_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 33 - 413
Target Start/End: Complemental strand, 16734944 - 16734564
Alignment:
| Q |
33 |
taggtgagagacttgagtccaaatgaaatggcttctaggaagattgatgatcaactacaagcaggttctatggtaaactttgatatatattatgatatat |
132 |
Q |
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| T |
16734944 |
taggtgagagacttgagtccaaatgaaatggcttctaggaagattgatgatcaactacaagcaggttctatggtaaactttgatatatattatgatatat |
16734845 |
T |
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| Q |
133 |
gcttttcatcttaagagaagaaactaatatttaaatttggttgttaatatatacctaacaattatgctatgatttctcatgaaaatgattgtgtagggta |
232 |
Q |
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| T |
16734844 |
gcttttcatcttaagagaagaaactaatatttaaatttggttgttaatatatacctaacaattatgctatgatttctcatgaaaatgattgtgtagggta |
16734745 |
T |
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| Q |
233 |
aagggtacacatcatcagaaaatcactcagagttgctgcatatgaatgataagcatgaatttggatttaatgaaaagaatgttgattgcatagacttgaa |
332 |
Q |
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| T |
16734744 |
aagggtacacatcatctgaaaatcactcagagttgctgcatatgaatgataagcatgaatttggatttaatgaaaagaatgttgattgcatagacttgaa |
16734645 |
T |
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| Q |
333 |
gcaaagagggatttgcttggttcctttgtctttgttggttaattatttagggtgatcatgactgatatttttgtctatatc |
413 |
Q |
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| T |
16734644 |
gcaaagagggatttgcttggttcctttgtctttgttggttaattatttagggtgatcatgactgatatttttgtctatatc |
16734564 |
T |
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