View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14198_low_16 (Length: 260)
Name: NF14198_low_16
Description: NF14198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14198_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22595275 - 22595524
Alignment:
| Q |
1 |
tggatacacatttgtaaaatcacggcaaataactatattaacgcagaaacaacaatcaatcacttcgcattttgacatcaaaagaccttagtcatgtgga |
100 |
Q |
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||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22595275 |
tggatacacgtttgcaaaatcacggcaaataactatattaactcagaaacaacaatcaatcacttcgcattttgacatcaaaagaccttagtcatgtgga |
22595374 |
T |
|
| Q |
101 |
gtcgatgaaaataattcaaaccaaacatatatttggtgtataagtcatctcactttatactcaacgtctaatttttcatccatccggtttaagagttcta |
200 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
22595375 |
atcgatgaaaataattcaaaccgaacatatatttggtgtataagtcatctcactttatactcaaagtctaatttttcatccatccggtttaagagttcta |
22595474 |
T |
|
| Q |
201 |
actcacat----ttactatacctacactttttcactcatgtagctctctg |
246 |
Q |
| |
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|||||||| |||||||||||||||||||||||||||||||||||||| |
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|
| T |
22595475 |
actcacatttacttactatacctacactttttcactcatgtagctctctg |
22595524 |
T |
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