View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14198_low_23 (Length: 215)
Name: NF14198_low_23
Description: NF14198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14198_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 26603772 - 26603592
Alignment:
| Q |
18 |
gaatgtcagaaacatcaccaactggtaccatggccagagggtgtatttcatctatttcagggatagagtatgataaggcagaggtaagggttgggttatc |
117 |
Q |
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| T |
26603772 |
gaatgtcagaaacatcaccaactggtaccatggccagagggtgtatttcatctatttcagggatagagtctgataaggcagatgtaagggttgggttatc |
26603673 |
T |
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| Q |
118 |
ctagtgtattcttgttacaagtccttaatttgttgttgggtttgaatgcagatcctatgtagtccttaaaaaacattacct |
198 |
Q |
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| T |
26603672 |
ctagtgtattcttgttctaagtccttaatttgttgttgggtttgaatgcagatcctatgtagtccttaaaaaacattacct |
26603592 |
T |
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