View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14198_low_8 (Length: 360)
Name: NF14198_low_8
Description: NF14198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14198_low_8 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 171; Significance: 9e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 24376769 - 24376943
Alignment:
| Q |
13 |
aaaatcacatatttctctgtttttccctcttaaatcatcccaacaactagaattaactaattttcagttcaaaagtatcaaaattcacgtcaacattcaa |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24376769 |
aaaatcacatatttctctgtttttccctcttaaatcatgccaacaactagaattaactaattttcagttcaaaagtatcaaaattcacgtcaacattcaa |
24376868 |
T |
|
| Q |
113 |
atcataacttcaacaaacatcaaaattaaacaagttcatgagtataaaactgcacaaaacctacctcaaaccacg |
187 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24376869 |
atcataacttcaacaaacatcaaaattaaacaagttcatgagtataaaactgcacaaaacctacctcaaaccacg |
24376943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University