View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14199_low_3 (Length: 308)
Name: NF14199_low_3
Description: NF14199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14199_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 8 - 293
Target Start/End: Original strand, 55321080 - 55321362
Alignment:
| Q |
8 |
agattatactactttttgggagaaactatttcagtctgtaatttaaaaacaacaaaactaatatattatagcttgaaagacactataaatcactataaca |
107 |
Q |
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| T |
55321080 |
agattatattactttttgggagaaactatttcagtctgtaatttaaaaacaacaaaactaatatattatagcttgaaagacactataaatcactataaca |
55321179 |
T |
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| Q |
108 |
ttaaacaaataatactaatcaagtaataatactggggctatcatgacaatcgaaataaaaatggtgctaaccaagagaaaagcaagctacttttcgttca |
207 |
Q |
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| T |
55321180 |
tcaaacaaataatactaatcaagtaataatactggggctat---gacaatcgaaataaaaatggtgctaaccaagagaaaagcaagctacttttcattca |
55321276 |
T |
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| Q |
208 |
ttctaaagactccaaatttccactgcactatacatctaagaaagattagacattcaaaattaatttaccttattgtgcaaggataa |
293 |
Q |
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| T |
55321277 |
ttctaaagactccaaatttccactgcactatacatctaagaaagattagacattcaaaattaatttaccttattgtgcaaggataa |
55321362 |
T |
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