View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14200_high_26 (Length: 358)
Name: NF14200_high_26
Description: NF14200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14200_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 25 - 344
Target Start/End: Original strand, 49739791 - 49740110
Alignment:
| Q |
25 |
tgtatatggaaagtatcacacaccatccactaattaaattaacacttggaagttgtaatcattcatccttgaattatgtttgaactatgaatagatatca |
124 |
Q |
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| T |
49739791 |
tgtatatggaaagtatcacacaccatccactaattaaattaacacttggaagttgtaatcattcatccttgaattatgtttgaactatgaatagatatca |
49739890 |
T |
|
| Q |
125 |
aatttcaactgtagttagatggttctagactatctgagaagnnnnnnnncccctgttatttgtcactttaatagtgtacggtacagttcctttgatatca |
224 |
Q |
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| T |
49739891 |
aatttcaactgtagttagatggttctagactatctgagaagttttttttcccctgttatttgtcactttaatagtgtacggtacagttcctttgatatca |
49739990 |
T |
|
| Q |
225 |
catgaagtaaattaagaaattgctttaaaatttatattttcaattccatttttagctcttcaagcataactctttaatcaatccattgcttacataaata |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49739991 |
catgaagtaaattaagaaattgctttaaaatttatattttcaattccatttttagctcttcaagcataactctttaatcaatccattgcttacataaata |
49740090 |
T |
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| Q |
325 |
tgaacctttccaagaataat |
344 |
Q |
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|||||||||||||| ||||| |
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| T |
49740091 |
tgaacctttccaagcataat |
49740110 |
T |
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