View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14200_low_16 (Length: 449)
Name: NF14200_low_16
Description: NF14200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14200_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 45 - 432
Target Start/End: Original strand, 32640788 - 32641175
Alignment:
| Q |
45 |
tgtagtaacacctttgttaaaatatggatagatttggaatatatttggatgtagtccggctggttttgtggaatggaagccatacatgccctcggatatc |
144 |
Q |
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| T |
32640788 |
tgtagttacacctttgttaaaatatggatagatttggaatatatttggatgtagtccggctggttttgtggaatggaagccatacatgccctcggatatc |
32640887 |
T |
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| Q |
145 |
ccaatagagacaaagaaattgtatccaaaaagtctctaatacaaattaatatattgacgatccggttgcacttcttcattgtaggggactcaaattaaca |
244 |
Q |
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| T |
32640888 |
ccaatagagacaaagaaattgtatccaaaaagtctctaatacaaattaatatatttacgatccggttgcacttcttcattgtaggggactcaaattaaca |
32640987 |
T |
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| Q |
245 |
ctagttgacgacgttagttccacataacaatttgatcttgaaatttggttctcaatgataccctccctacgatcctcagagtgatcttattgagatcctg |
344 |
Q |
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| T |
32640988 |
ctagttgacgacgttagttccacataacaatttgatcttgaaatttggttctcaatgataccctccctacgatcctcaaagtgatcttattgagatcctg |
32641087 |
T |
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| Q |
345 |
caaacaacgtggtttggctagtgggtactgaagaaaaccgggctatagtttcaccctatctgcttcgtacatctctaccatatggaaa |
432 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32641088 |
caaacaacgtggtttggctagtcggtactgaagaaaaccgggctatagtttcaccctatctgcttcgtacatctctaccacatggaaa |
32641175 |
T |
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