View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14200_low_37 (Length: 304)
Name: NF14200_low_37
Description: NF14200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14200_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 295
Target Start/End: Complemental strand, 40788516 - 40788239
Alignment:
| Q |
18 |
aattctaaaaaagtctactgtacatttcaattttcaatacataccacaactgccaaacctaaccacagtccacacataattaaattgggggtccataaca |
117 |
Q |
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| T |
40788516 |
aattctaaaaaagtctactgtacatttcaattttcaatacataccacaactgccaaacctaaccacagtccacacataattaaattgggggtccataaca |
40788417 |
T |
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| Q |
118 |
acctattattgctatcacaatcaacaattttacctggatcatgtatatgcaacactgttcttattaatcgcacaggaacagtcaaatcacaaggaagggt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40788416 |
acctattattgctatcacaatcaacaattttacctggatcatgtatatgcaacactgttcttattaatcgcacaggaacagtcaaatcacaaggaagggt |
40788317 |
T |
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| Q |
218 |
aagtgtttcggatcttcagtgtttgcctcttttggaaaatcatacaagtcaatgtaatatgttactagcctttgtttc |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
40788316 |
aagtgtttcggatcttcagtgtttgcctcttttggaaaatcatacaagtcaatgtaatatgttactagcttttgtttc |
40788239 |
T |
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