View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14200_low_39 (Length: 277)
Name: NF14200_low_39
Description: NF14200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14200_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 40788196 - 40787956
Alignment:
| Q |
19 |
ttgctgatagaagatatgccaattatggcaccaccggttttgacggggggtgtatgcctattggttagtatatatccaattaaaggcaaaatagttcctt |
118 |
Q |
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| T |
40788196 |
ttgctgatagaagatatgccaattatggcaccaccggttttgacggggggtgtatgcctattggttggtatatatccaattaaaggcaaaatagttcctt |
40788097 |
T |
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| Q |
119 |
ctctaaaccaaagttacatgttggaatattgatagaaactagctaaaaatgggatcatccttgcaagagtgtgaccaacctcattgtcttgtcttccaac |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40788096 |
ctctaaaccaaagttacatgttggaatattgatagaaactaactaaaaatggaatcatccttgcaagagtgtgaccaacctcattgtcttgtcttccaac |
40787997 |
T |
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| Q |
219 |
aaactcaacatgagataatatgaagtttaataacatatgcc |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
40787996 |
aaactcaacatgagataatatgaagtttaataacatatgcc |
40787956 |
T |
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