View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14201_high_3 (Length: 242)

Name: NF14201_high_3
Description: NF14201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14201_high_3
NF14201_high_3
[»] chr3 (2 HSPs)
chr3 (3-226)||(18536295-18536518)
chr3 (55-128)||(18550614-18550689)
[»] chr4 (12 HSPs)
chr4 (17-226)||(5692292-5692499)
chr4 (6-226)||(5686065-5686291)
chr4 (54-226)||(9195384-9195557)
chr4 (92-226)||(9244612-9244745)
chr4 (55-226)||(5719527-5719696)
chr4 (58-224)||(5615394-5615559)
chr4 (54-128)||(9245869-9245945)
chr4 (54-128)||(9287117-9287193)
chr4 (166-226)||(5679093-5679153)
chr4 (92-128)||(9205217-9205253)
chr4 (92-128)||(9209436-9209472)
chr4 (92-128)||(9276231-9276267)
[»] scaffold0386 (4 HSPs)
scaffold0386 (137-226)||(4240-4329)
scaffold0386 (3-94)||(4355-4446)
scaffold0386 (56-226)||(7086-7255)
scaffold0386 (56-226)||(10106-10275)
[»] scaffold0959 (1 HSPs)
scaffold0959 (54-128)||(3477-3553)
[»] scaffold0753 (2 HSPs)
scaffold0753 (54-128)||(215-291)
scaffold0753 (74-223)||(2262-2412)
[»] scaffold0135 (7 HSPs)
scaffold0135 (92-128)||(3300-3336)
scaffold0135 (92-128)||(7515-7551)
scaffold0135 (92-128)||(11730-11766)
scaffold0135 (92-128)||(15945-15981)
scaffold0135 (92-128)||(20160-20196)
scaffold0135 (92-128)||(24375-24411)
scaffold0135 (92-128)||(28590-28626)
[»] chr7 (1 HSPs)
chr7 (194-226)||(21579799-21579831)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 18536295 - 18536518
Alignment:
Q  3 catcgaggattgaattttaggtgtcgtaaaggaaattgtgtagccaaaataagataaatgagttttttctatagcaagagacttgtagaataccttatgc 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18536295 catcgaggatttaattttaggtgtcgtaaaggaaattgtgtagccaaaataagataaatgagttttttctatagcaagagacttgtagaataccttatgc 18536394  T
Q  103 tagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaatagttatgttttcttcttctgtttttccctaatttgctggaccttgaagtta 202  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18536395 tagaatattccacttgttgtcttttactttttttgtgcatgctctcaatagttatgttttcttcttctgtttttccctaatttgctggaccttgaagtta 18536494  T
Q  203 tgattttatactctaagatgatgg 226  Q
    ||||||| ||||||||||||||||    
T  18536495 tgattttgtactctaagatgatgg 18536518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 18550614 - 18550689
Alignment:
Q  55 gataaatgagttttttctatagcaagagacttgta--gaataccttatgctagaatattccacttgttgtctttta 128  Q
    ||||||||| || ||||| ||||| |||| |||||  | |||||||||||||||||||| ||||||||||| ||||    
T  18550614 gataaatgaattctttctttagcaggagaattgtacggtataccttatgctagaatatttcacttgttgtcattta 18550689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 5692292 - 5692499
Alignment:
Q  17 ttttaggtgtcgtaaaggaaattgtgtagccaaaataagataaatgagttttttctatagcaagagacttgtagaataccttatgctagaatattccact 116  Q
    ||||||||||||||||||||| ||||||  | || | ||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  5692292 ttttaggtgtcgtaaaggaaaatgtgtactcgaa-tgagataaatgagttctttctatagcaagagacttgtacaatacattatgctagaatattccact 5692390  T
Q  117 tgttgtcttttacnnnnnnngtgcatgctctcaatagttatgttttcttcttctgtttttccctaatttgctggaccttgaagttatgattttatactct 216  Q
    ||||||| |||||        ||||||||||||||| |||| |||||||||| ||||||||| |||||| || |||| ||||||||||||||| ||||||    
T  5692391 tgttgtcatttacatttgtt-tgcatgctctcaataattattttttcttcttatgtttttccataatttcctagaccatgaagttatgattttgtactct 5692489  T
Q  217 aagatgatgg 226  Q
    ||||||||||    
T  5692490 aagatgatgg 5692499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 5686065 - 5686291
Alignment:
Q  6 cgaggattgaattttaggtgtcgtaaaggaaattgtgtagccaaaataagataaatgagttttttctatagcaagagacttgtagaataccttatgctag 105  Q
    |||||| | ||||||||||||||||||||||| ||| || ||||     |||||||||||| |||||||||||||||||||||| ||||| ||||| |||    
T  5686065 cgaggagttaattttaggtgtcgtaaaggaaaatgt-tatccaa-----gataaatgagttctttctatagcaagagacttgtacaatactttatgttag 5686158  T
Q  106 aatattccacttgttgtcttttac-nnnnnnngtgcatgctctcaatagttatgttttcttc------------ttctgtttttccctaatttgctggac 192  Q
    || ||||||||||||||| |||||        ||||||||| |||||| ||||  |||||||            ||||||||||||||||||| ||||||    
T  5686159 aaaattccacttgttgtcatttacttttttttgtgcatgct-tcaataattattatttcttcttcttcttctttttctgtttttccctaatttcctggac 5686257  T
Q  193 cttgaagttatgattttatactctaagatgatgg 226  Q
    ||||||||||||||||| |||||||| |||||||    
T  5686258 cttgaagttatgattttgtactctaaaatgatgg 5686291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 226
Target Start/End: Complemental strand, 9195557 - 9195384
Alignment:
Q  54 agataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaat 151  Q
    ||||||||||||| ||||| || ||||||| ||||| ||||  |||||||||||||||||||| |||||||| ||||        || ||||| ||||||    
T  9195557 agataaatgagttctttctctaacaagagaattgtacaatataccttatgctagaatattccatttgttgtcattta--gtttttgttcatgcactcaat 9195460  T
Q  152 agtta-tgttttcttcttctgtttttccctaatttgctggaccttgaagttatgattttatactctaagatgatgg 226  Q
    | ||| | |||||||||| |||||||||||| |||   ||||||||||||||||| ||| || | |||||||||||    
T  9195459 aattattattttcttcttatgtttttccctagttttaaggaccttgaagttatgactttgtattataagatgatgg 9195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 9244745 - 9244612
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaatagttatg-ttttcttcttctgtttttccctaatttgctgg 190  Q
    |||||||||||||||||||||||||||||||| ||||        ||| |||| ||||||| ||||  |||||||||||| |||| |||||||||   ||    
T  9244745 ataccttatgctagaatattccacttgttgtcattta--gtttttgtgaatgcactcaataattattattttcttcttctattttcccctaatttcaagg 9244648  T
Q  191 accttgaagttatgattttatactctaagatgatgg 226  Q
    ||||| ||||||||||||| || |||||||||||||    
T  9244647 accttaaagttatgattttgtaatctaagatgatgg 9244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 226
Target Start/End: Complemental strand, 5719696 - 5719527
Alignment:
Q  55 gataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaata 152  Q
    |||||||||||| ||||| |||||||||| ||||| ||||  ||| ||||||||||||| ||||||||||| ||||        |||||||  |||||||    
T  5719696 gataaatgagttctttctctagcaagagaattgtacaatatacctcatgctagaatatttcacttgttgtcattta--gtttttgtgcatgtactcaata 5719599  T
Q  153 gttatgttttcttcttctgtttttccctaatttgctggaccttgaagttatgattttatactctaagatgatgg 226  Q
     |||| ||||||||||||| ||||||||||||   ||||| || ||||||||||||| || |||| ||||||||    
T  5719598 attat-ttttcttcttctg-ttttccctaattccatggactttaaagttatgattttgtaatctatgatgatgg 5719527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 5615559 - 5615394
Alignment:
Q  58 aaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaatagtt 155  Q
    ||||||||| ||||| | |||||| | ||||| ||||  | ||||||||||||||||||||||||||| ||||        ||||||||||||||||  |    
T  5615559 aaatgagttctttctctggcaagataattgtacaatatacattatgctagaatattccacttgttgtcattta--atttttgtgcatgctctcaataact 5615462  T
Q  156 atgttttcttcttctgtttttccctaatttgctggaccttgaagttatgattttatactctaagatgat 224  Q
    || |||||||||| |||| |||  ||||||  |||||||||| ||||| ||||| ||||||||||||||    
T  5615461 attttttcttcttttgttcttcg-taatttcatggaccttgatgttataattttgtactctaagatgat 5615394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 9245945 - 9245869
Alignment:
Q  54 agataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtctttta 128  Q
    ||||||||||||| ||||| |||||||||| ||||| ||||  || |||||||||||||||||||||||||| ||||    
T  9245945 agataaatgagttctttctctagcaagagaattgtacaatataccctatgctagaatattccacttgttgtcattta 9245869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 9287193 - 9287117
Alignment:
Q  54 agataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtctttta 128  Q
    ||||||| ||||| ||||| |||||||||| ||||| ||||  ||||||||||||||||||||| ||||||| ||||    
T  9287193 agataaacgagttctttctctagcaagagaattgtacaatataccttatgctagaatattccacatgttgtcattta 9287117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 5679093 - 5679153
Alignment:
Q  166 cttctgtttttccctaatttgctggaccttgaagttatgattttatactctaagatgatgg 226  Q
    ||||||||||||||||||||  || ||||||||||||||||||| |||| ||| |||||||    
T  5679093 cttctgtttttccctaatttcttgaaccttgaagttatgattttgtactataatatgatgg 5679153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 9205253 - 9205217
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9205253 ataccttatgctagaatattccacttgttgtcattta 9205217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 9209472 - 9209436
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9209472 ataccttatgctagaatattccacttgttgtcattta 9209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 9276267 - 9276231
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9276267 ataccttatgctagaatattccacttgttgtcattta 9276231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 4329 - 4240
Alignment:
Q  137 gtgcatgctctcaatagttatgttttcttcttctgtttttccctaatttgctggaccttgaagttatgattttatactctaagatgatgg 226  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| || ||||||||||||||||    
T  4329 gtgcatgctctcaatagttatgttttcttcttctgtttttccttaattttatggaccttgaagttatgatgttgtactctaagatgatgg 4240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 4446 - 4355
Alignment:
Q  3 catcgaggattgaattttaggtgtcgtaaaggaaattgtgtagccaaaataagataaatgagttttttctatagcaagagacttgtagaata 94  Q
    ||||||||||| ||||||||||||||||  ||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  4446 catcgaggatttaattttaggtgtcgtagcggaaattgtatacccataagaagataaatgagttttttctatagcaagagacttgtagaata 4355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 7255 - 7086
Alignment:
Q  56 ataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaatag 153  Q
    ||||||||||| ||||| |||||||||| ||||| ||||  ||||||||||||||||||||||||||||| ||||        |||||||||||||||||    
T  7255 ataaatgagttctttctctagcaagagaattgtacaatataccttatgctagaatattccacttgttgtcgttta--gttattgtgcatgctctcaatag 7158  T
Q  154 ttatgttttcttcttctgtttttccctaatttgctggaccttgaagttatgattttatactctaagatgatgg 226  Q
    || | || | | ||| || |||||||||||||  |||||||||||||||||||||| || ||||| |||||||    
T  7157 tt-ttttatttccttatgcttttccctaatttcttggaccttgaagttatgattttgtattctaatatgatgg 7086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 10275 - 10106
Alignment:
Q  56 ataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaatag 153  Q
    ||||||||||| ||||| |||||||||| ||||| ||||  ||||| |||||||||||||||||||||||  |||        ||||||||||||||||     
T  10275 ataaatgagttctttctctagcaagagaattgtacaatataccttacgctagaatattccacttgttgtcgatta--gttattgtgcatgctctcaataa 10178  T
Q  154 ttatgttttcttcttctgtttttccctaatttgctggaccttgaagttatgattttatactctaagatgatgg 226  Q
    || | || | | |||||| |||||||||||||  |||||||||||||||||||||| |||||||| |||||||    
T  10177 tt-tattatttccttctgcttttccctaatttcttggaccttgaagttatgattttgtactctaatatgatgg 10106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0959 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0959
Description:

Target: scaffold0959; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 3553 - 3477
Alignment:
Q  54 agataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtctttta 128  Q
    ||||||||||||| ||||| ||||||||||  |||| ||||  ||||||||||||||||||||||||||||| ||||    
T  3553 agataaatgagttctttctctagcaagagaactgtacaataaaccttatgctagaatattccacttgttgtcattta 3477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0753 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0753
Description:

Target: scaffold0753; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 215 - 291
Alignment:
Q  54 agataaatgagttttttctatagcaagagacttgtagaata--ccttatgctagaatattccacttgttgtctttta 128  Q
    ||||||||||||| ||||| |||||||||| ||||| ||||  || |||||||||||||||||||||||||| ||||    
T  215 agataaatgagttctttctctagcaagagaattgtacaatattccctatgctagaatattccacttgttgtcattta 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0753; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 2262 - 2412
Alignment:
Q  74 tagcaagagacttgtaga--ataccttatgctagaatattccacttgttgtcttttacnnnnnnngtgcatgctctcaatagtta-tgttttcttcttct 170  Q
    |||||||||| ||||| |  ||||||||||||||||||||| |||||||||| ||||        |||||||| ||||||| ||| | ||||||||||||    
T  2262 tagcaagagaattgtacactataccttatgctagaatattctacttgttgtcattta--gtttttgtgcatgcactcaataattattattttcttcttct 2359  T
Q  171 gtttttccctaatttgctggaccttgaagttatgattttatactctaagatga 223  Q
     |||| |||||||||   ||||||| ||||||||| ||| || | ||||||||    
T  2360 attttcccctaatttcaaggacctttaagttatgactttgtaatataagatga 2412  T

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Target: scaffold0135 (Bit Score: 33; Significance: 0.000000001; HSPs: 7)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 3336 - 3300
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  3336 ataccttatgctagaatattccacttgttgtcattta 3300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 7551 - 7515
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  7551 ataccttatgctagaatattccacttgttgtcattta 7515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 11766 - 11730
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  11766 ataccttatgctagaatattccacttgttgtcattta 11730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 15981 - 15945
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  15981 ataccttatgctagaatattccacttgttgtcattta 15945  T

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Target: scaffold0135; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 20196 - 20160
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  20196 ataccttatgctagaatattccacttgttgtcattta 20160  T

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Target: scaffold0135; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 24411 - 24375
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  24411 ataccttatgctagaatattccacttgttgtcattta 24375  T

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Target: scaffold0135; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 28626 - 28590
Alignment:
Q  92 ataccttatgctagaatattccacttgttgtctttta 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  28626 ataccttatgctagaatattccacttgttgtcattta 28590  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 21579799 - 21579831
Alignment:
Q  194 ttgaagttatgattttatactctaagatgatgg 226  Q
    ||||||||||||||||||||| |||||||||||    
T  21579799 ttgaagttatgattttatactataagatgatgg 21579831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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