View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14205_high_10 (Length: 346)

Name: NF14205_high_10
Description: NF14205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14205_high_10
NF14205_high_10
[»] chr5 (34 HSPs)
chr5 (132-346)||(43513026-43513239)
chr5 (12-131)||(33149619-33149738)
chr5 (12-137)||(18520865-18520990)
chr5 (12-132)||(2740273-2740393)
chr5 (12-131)||(35785199-35785318)
chr5 (12-133)||(36732923-36733044)
chr5 (12-131)||(40145407-40145526)
chr5 (12-131)||(42414283-42414402)
chr5 (12-136)||(14831809-14831933)
chr5 (12-135)||(13811648-13811771)
chr5 (16-131)||(35943877-35943992)
chr5 (15-131)||(28177775-28177891)
chr5 (12-133)||(15409591-15409712)
chr5 (12-137)||(36875593-36875709)
chr5 (12-132)||(6679697-6679817)
chr5 (12-131)||(26720516-26720635)
chr5 (12-131)||(26990265-26990384)
chr5 (12-135)||(31008984-31009107)
chr5 (12-134)||(3921246-3921368)
chr5 (12-132)||(2252149-2252269)
chr5 (12-131)||(20073497-20073616)
chr5 (12-131)||(33825305-33825424)
chr5 (21-83)||(31132392-31132454)
chr5 (14-134)||(38296200-38296320)
chr5 (27-130)||(16327902-16328005)
chr5 (27-133)||(9603811-9603917)
chr5 (27-133)||(39688893-39688999)
chr5 (40-132)||(41470425-41470517)
chr5 (12-131)||(6259982-6260101)
chr5 (68-126)||(10356639-10356698)
chr5 (108-137)||(33149550-33149579)
chr5 (12-56)||(2177439-2177483)
chr5 (108-136)||(16115245-16115273)
chr5 (12-104)||(39557498-39557590)
[»] chr8 (32 HSPs)
chr8 (12-131)||(1179921-1180040)
chr8 (12-131)||(34012277-34012396)
chr8 (12-131)||(12831047-12831166)
chr8 (12-131)||(40423924-40424043)
chr8 (12-133)||(14547920-14548041)
chr8 (16-131)||(15197333-15197448)
chr8 (12-137)||(5957824-5957949)
chr8 (12-136)||(504102-504226)
chr8 (12-132)||(37038478-37038598)
chr8 (12-126)||(10621068-10621182)
chr8 (12-136)||(43414562-43414686)
chr8 (12-132)||(44507068-44507188)
chr8 (12-131)||(23122578-23122697)
chr8 (12-134)||(10284612-10284734)
chr8 (12-112)||(8841413-8841513)
chr8 (12-137)||(16383371-16383496)
chr8 (12-131)||(15048162-15048281)
chr8 (12-87)||(9122229-9122304)
chr8 (12-133)||(4854844-4854965)
chr8 (12-137)||(30479455-30479580)
chr8 (12-133)||(34307214-34307335)
chr8 (12-133)||(15258910-15259031)
chr8 (12-133)||(24307774-24307895)
chr8 (12-131)||(20074923-20075034)
chr8 (68-138)||(24307622-24307692)
chr8 (12-137)||(16056382-16056507)
chr8 (12-133)||(42221513-42221634)
chr8 (12-132)||(17443824-17443944)
chr8 (12-45)||(25838275-25838308)
chr8 (12-131)||(14055573-14055692)
chr8 (108-137)||(34012208-34012237)
chr8 (12-89)||(38229470-38229547)
[»] chr2 (34 HSPs)
chr2 (12-131)||(17473020-17473139)
chr2 (12-133)||(9058478-9058599)
chr2 (12-137)||(28863449-28863574)
chr2 (12-132)||(7465716-7465836)
chr2 (12-128)||(19930801-19930917)
chr2 (12-131)||(13438343-13438462)
chr2 (12-135)||(33436081-33436204)
chr2 (12-131)||(40701478-40701597)
chr2 (16-133)||(10249367-10249484)
chr2 (12-132)||(32505629-32505749)
chr2 (22-132)||(5574479-5574589)
chr2 (12-133)||(30915461-30915582)
chr2 (12-131)||(4060685-4060804)
chr2 (12-135)||(20700811-20700934)
chr2 (12-131)||(28381636-28381755)
chr2 (12-135)||(38273123-38273246)
chr2 (14-131)||(40613885-40614002)
chr2 (27-131)||(27864704-27864808)
chr2 (12-130)||(41575138-41575257)
chr2 (22-134)||(38882802-38882916)
chr2 (14-135)||(42257189-42257310)
chr2 (12-132)||(2533123-2533242)
chr2 (12-132)||(33436210-33436330)
chr2 (12-134)||(26891485-26891607)
chr2 (12-125)||(3439985-3440098)
chr2 (12-132)||(36168835-36168955)
chr2 (12-131)||(17819985-17820104)
chr2 (12-131)||(43490121-43490240)
chr2 (12-137)||(13365345-13365472)
chr2 (12-131)||(38732354-38732473)
chr2 (12-113)||(2997468-2997569)
chr2 (14-88)||(3737986-3738060)
chr2 (62-133)||(17823782-17823853)
chr2 (12-126)||(44151928-44152046)
[»] chr1 (31 HSPs)
chr1 (12-131)||(47452301-47452420)
chr1 (12-134)||(2581912-2582034)
chr1 (12-131)||(9474857-9474976)
chr1 (12-133)||(38632302-38632423)
chr1 (12-136)||(38595149-38595273)
chr1 (12-132)||(51898664-51898784)
chr1 (12-131)||(3000319-3000438)
chr1 (12-131)||(27564716-27564835)
chr1 (12-131)||(48716263-48716382)
chr1 (16-137)||(8346373-8346494)
chr1 (12-132)||(41758804-41758924)
chr1 (12-132)||(50630457-50630577)
chr1 (12-134)||(32813244-32813366)
chr1 (12-128)||(44548357-44548473)
chr1 (12-131)||(37649198-37649317)
chr1 (12-131)||(43132-43251)
chr1 (12-130)||(11152359-11152476)
chr1 (12-133)||(49811508-49811629)
chr1 (21-133)||(26274430-26274542)
chr1 (12-126)||(44453984-44454098)
chr1 (12-136)||(5958981-5959105)
chr1 (21-124)||(26440741-26440844)
chr1 (12-131)||(50590981-50591100)
chr1 (12-100)||(13414792-13414880)
chr1 (12-134)||(23597072-23597194)
chr1 (12-133)||(45044541-45044662)
chr1 (12-132)||(37926419-37926539)
chr1 (12-88)||(48489343-48489419)
chr1 (12-131)||(47748443-47748561)
chr1 (12-131)||(3302514-3302633)
chr1 (12-131)||(6260870-6260989)
[»] chr4 (32 HSPs)
chr4 (12-131)||(6034044-6034163)
chr4 (12-137)||(480428-480553)
chr4 (12-133)||(48183030-48183151)
chr4 (12-137)||(50052409-50052534)
chr4 (12-138)||(42044348-42044474)
chr4 (12-132)||(29234226-29234346)
chr4 (12-131)||(11511443-11511562)
chr4 (12-131)||(41236347-41236466)
chr4 (12-131)||(54473514-54473633)
chr4 (12-133)||(24995088-24995209)
chr4 (12-131)||(40574779-40574898)
chr4 (12-134)||(29239883-29240005)
chr4 (12-133)||(23608233-23608354)
chr4 (12-131)||(50526152-50526271)
chr4 (12-131)||(3481654-3481773)
chr4 (12-126)||(53352547-53352660)
chr4 (12-131)||(31910192-31910311)
chr4 (12-132)||(50813873-50813993)
chr4 (27-133)||(29977883-29977989)
chr4 (12-133)||(29547940-29548061)
chr4 (12-93)||(41823920-41824001)
chr4 (12-133)||(47104542-47104663)
chr4 (12-133)||(55475189-55475310)
chr4 (12-113)||(17983724-17983825)
chr4 (12-132)||(28480249-28480369)
chr4 (12-132)||(28481124-28481244)
chr4 (12-132)||(28481999-28482119)
chr4 (12-91)||(56300146-56300225)
chr4 (12-133)||(48647707-48647828)
chr4 (12-131)||(8343144-8343263)
chr4 (12-123)||(29589721-29589831)
chr4 (12-132)||(44536727-44536846)
[»] chr3 (37 HSPs)
chr3 (16-135)||(49607410-49607529)
chr3 (12-131)||(53982011-53982130)
chr3 (12-131)||(33644200-33644319)
chr3 (16-137)||(31456683-31456804)
chr3 (12-133)||(54868876-54868997)
chr3 (22-133)||(27714882-27714993)
chr3 (12-126)||(52629305-52629419)
chr3 (12-131)||(8076393-8076512)
chr3 (12-134)||(36707409-36707527)
chr3 (12-132)||(17470404-17470524)
chr3 (21-127)||(48587081-48587187)
chr3 (14-131)||(26141515-26141632)
chr3 (22-133)||(11095346-11095455)
chr3 (18-133)||(33118838-33118953)
chr3 (12-131)||(47531865-47531984)
chr3 (12-132)||(9562998-9563118)
chr3 (12-127)||(30801714-30801829)
chr3 (12-135)||(11347903-11348026)
chr3 (12-131)||(20764896-20765015)
chr3 (12-131)||(51419341-51419460)
chr3 (12-126)||(26754700-26754814)
chr3 (12-132)||(24699935-24700055)
chr3 (14-133)||(11907369-11907488)
chr3 (12-131)||(14623820-14623939)
chr3 (14-133)||(41189747-41189866)
chr3 (12-130)||(13898036-13898154)
chr3 (12-132)||(35536625-35536745)
chr3 (16-133)||(35965767-35965876)
chr3 (12-131)||(41080709-41080826)
chr3 (12-132)||(8956761-8956881)
chr3 (12-128)||(25407128-25407245)
chr3 (69-132)||(36331416-36331479)
chr3 (12-131)||(45058534-45058652)
chr3 (12-109)||(36331310-36331407)
chr3 (27-126)||(42823116-42823215)
chr3 (108-137)||(48587013-48587042)
chr3 (12-133)||(1758437-1758560)
[»] chr6 (21 HSPs)
chr6 (12-131)||(32869678-32869797)
chr6 (12-128)||(22880639-22880755)
chr6 (12-132)||(11427615-11427737)
chr6 (12-131)||(29857827-29857946)
chr6 (12-136)||(17598549-17598673)
chr6 (12-134)||(6209446-6209568)
chr6 (16-135)||(23128112-23128231)
chr6 (12-132)||(31976247-31976367)
chr6 (16-131)||(31109385-31109500)
chr6 (12-136)||(946371-946495)
chr6 (12-134)||(30341341-30341463)
chr6 (12-137)||(12732476-12732601)
chr6 (14-135)||(15832573-15832694)
chr6 (12-133)||(15990023-15990144)
chr6 (12-135)||(31110742-31110863)
chr6 (12-131)||(15508005-15508124)
chr6 (15-127)||(28536472-28536582)
chr6 (12-131)||(31953011-31953130)
chr6 (12-131)||(4231548-4231667)
chr6 (27-126)||(9379708-9379807)
chr6 (108-137)||(32869837-32869866)
[»] chr7 (34 HSPs)
chr7 (12-133)||(8080364-8080485)
chr7 (12-128)||(3783998-3784114)
chr7 (12-131)||(38267040-38267159)
chr7 (12-135)||(38837213-38837336)
chr7 (19-133)||(7389387-7389501)
chr7 (12-137)||(35137527-35137652)
chr7 (21-132)||(3434561-3434672)
chr7 (12-131)||(4999495-4999614)
chr7 (12-131)||(19329842-19329961)
chr7 (22-132)||(36362025-36362135)
chr7 (12-134)||(40957704-40957826)
chr7 (12-137)||(3694361-3694486)
chr7 (22-132)||(36361904-36362014)
chr7 (16-133)||(19436172-19436289)
chr7 (12-130)||(32951474-32951592)
chr7 (12-126)||(35522881-35522995)
chr7 (12-136)||(8238207-8238332)
chr7 (12-133)||(36208171-36208292)
chr7 (12-134)||(10343544-10343666)
chr7 (12-138)||(35468836-35468962)
chr7 (12-132)||(22343360-22343480)
chr7 (12-134)||(11044185-11044297)
chr7 (12-131)||(31735884-31735996)
chr7 (12-136)||(7727901-7728025)
chr7 (12-132)||(26296643-26296763)
chr7 (12-132)||(46033782-46033902)
chr7 (12-135)||(18207176-18207298)
chr7 (12-131)||(32564407-32564526)
chr7 (12-131)||(41423682-41423801)
chr7 (37-131)||(46374808-46374902)
chr7 (19-131)||(21234401-21234513)
chr7 (12-131)||(39255905-39256023)
chr7 (12-97)||(27744290-27744375)
chr7 (27-100)||(16374820-16374893)
[»] scaffold0237 (1 HSPs)
scaffold0237 (12-131)||(4029-4148)
[»] scaffold0321 (1 HSPs)
scaffold0321 (12-136)||(10090-10214)
[»] scaffold1268 (1 HSPs)
scaffold1268 (12-131)||(910-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (12-131)||(910-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-115)||(152514-152617)


Alignment Details
Target: chr5 (Bit Score: 176; Significance: 9e-95; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 132 - 346
Target Start/End: Original strand, 43513026 - 43513239
Alignment:
Q  132 ttttttacggtcaattaatctaatactacctacctatctttttaaagtaaaatacatacatacgtgtattgacttaactatgtt--tacggacaaaaccg 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  43513026 ttttttacggtcaattaatctaatactacctacctatctttttaaagtaaaatacatacatacgtgtattgacttaactatgtttatacggacacaaccg 43513125  T
Q  230 cacaaccttttttcggtacannnnnnnattaccgcaactgtcggtgatggacagactgactgatagtagtgtcattcttttctcaccataccacatgatt 329  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43513126 cacaaccttttttcggtaca---ttttattaccgcaactgtcggtgatggacagactgactgatagtagtgtcattcttttctcaccataccacatgatt 43513222  T
Q  330 gtatgtcgctgtctgtc 346  Q
    |||||||||||||||||    
T  43513223 gtatgtcgctgtctgtc 43513239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 33149619 - 33149738
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  33149619 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagg 33149718  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  33149719 gtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 18520865 - 18520990
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  18520865 agagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 18520964  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||| ||||||||    
T  18520965 gtgtctatgtatcattattctttttt 18520990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 2740393 - 2740273
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  2740393 agagaaggggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 2740294  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||||||||||||    
T  2740293 atgtctatgtatcattactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 35785318 - 35785199
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  35785318 agagaagatgagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 35785219  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  35785218 gtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 36732923 - 36733044
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | |||| |||||||||| ||||||||||||||||||||||||| | | ||||||    
T  36732923 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagg 36733022  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||||||||||    
T  36733023 gtgtctatgtatcattactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 40145526 - 40145407
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||| ||| |||||||||||| ||| ||||||    
T  40145526 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagg 40145427  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  40145426 gtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 42414283 - 42414402
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||  |    
T  42414283 agagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactg 42414382  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  42414383 gtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 14831933 - 14831809
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||| |||| | |||||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||||||||| ||| |||||     
T  14831933 agagaagaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaga 14831834  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
    |||||||||||||||||||| ||||    
T  14831833 gtgtctatgtatcattactcatttt 14831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 13811771 - 13811648
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| | |||||| ||| ||||||    
T  13811771 agagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagg 13811672  T
Q  112 gtgtctatgtatcattactctttt 135  Q
    ||||||||||||| ||||||||||    
T  13811671 gtgtctatgtatctttactctttt 13811648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 35943877 - 35943992
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||| | |||||| ||| ||||||||||    
T  35943877 aagaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgt 35943976  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||| ||||    
T  35943977 ctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 28177891 - 28177775
Alignment:
Q  15 gaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtg 114  Q
    ||||||||||||||||| |||||||| ||||||||| ||||  | || |||||||||||| ||||||||||||||||||||||||| ||| |||||| ||    
T  28177891 gaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatg 28177792  T
Q  115 tctatgtatcattactc 131  Q
    |||||||||||| ||||    
T  28177791 tctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 15409591 - 15409712
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| | |||||||||||||||| ||||  |  |||||||||||||| |||||||||||||||||  ||||||  || ||||||    
T  15409591 agagaagaggagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaagg 15409690  T
Q  112 gtgtctatgtatcattactctt 133  Q
     |||||||||||||| ||||||    
T  15409691 atgtctatgtatcataactctt 15409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 36875593 - 36875709
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| | ||||         || ||||||||||||||||||||||||| ||| ||||||    
T  36875593 agagaagaggagaaaaaagagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgccacctaagg 36875683  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||||| ||||||    
T  36875684 gtgtctatgtatcattactttttttt 36875709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 6679817 - 6679697
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||| |||| ||||||||| ||||  | || |||||||||||| |||||||||||||||| |||||||| ||| |||| |    
T  6679817 agagaagaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaag 6679718  T
Q  112 gtgtctatgtatcattactct 132  Q
     |||||||||||||| |||||    
T  6679717 atgtctatgtatcataactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 26720635 - 26720516
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| |||||||||||||||||||||||  |  | |||||||||||| || ||| ||||| |||||||||||| ||| ||||||    
T  26720635 agagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26720536  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  26720535 atgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 26990384 - 26990265
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| |||||||||||||||||||||||  |  | |||||||||||| || ||| ||||| |||||||||||| ||| ||||||    
T  26990384 agagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26990285  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  26990284 atgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 31009107 - 31008984
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||| ||| | |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||  |||  ||||||  || ||||||    
T  31009107 agagaagagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaagg 31009008  T
Q  112 gtgtctatgtatcattactctttt 135  Q
     ||| |||||||||| ||||||||    
T  31009007 atgtttatgtatcataactctttt 31008984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 3921246 - 3921368
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  3921246 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 3921345  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||| |||||||||| |||||||    
T  3921346 gtgtttatgtatcataactcttt 3921368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 2252149 - 2252269
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  2252149 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2252248  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||| |||||||||| |||||    
T  2252249 atgtttatgtatcataactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 20073497 - 20073616
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||| | ||||||||||||||| || ||||| |    |||||  ||||| || |||| |||||||||||||||||  ||||||| |    
T  20073497 agagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatg 20073596  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||||||| |||||||||||    
T  20073597 atgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 33825305 - 33825424
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| ||| |||||| ||||||||||||||   | | ||||| |  |||||||||||| || |||||||||||| | ||||||| ||| |||||     
T  33825305 agagaagagaagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaaga 33825404  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||| ||||||||||    
T  33825405 atgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 31132454 - 31132392
Alignment:
Q  21 gagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgg 83  Q
    ||||||||||||||||| |||||||||||| ||||| | ||||| ||||||||| ||||||||    
T  31132454 gagagaaaagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 38296320 - 38296200
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggt 113  Q
    |||||||||||  || || ||||||||||||||  |||||||| || ||||||||| |||| |||||||||| | ||  ||||||||  || |||||       
T  38296320 agaagaggagatgaatgagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagata 38296221  T
Q  114 gtctatgtatcattactcttt 134  Q
    ||||||||||||| |||||||    
T  38296220 gtctatgtatcataactcttt 38296200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 16328005 - 16327902
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcat 126  Q
    |||||||||||||||||||| | | | ||||| |  |||||||||||| || |||||||||||| || |||||| ||| |||||| | | ||| ||||||    
T  16328005 aaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcat 16327906  T
Q  127 tact 130  Q
    ||||    
T  16327905 tact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 9603917 - 9603811
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcat 126  Q
    ||||| |||||||| ||||  ||| |||| || || | |||||||||| |||||| ||||| || | |||||||| || |||||| ||| ||||||||||    
T  9603917 aaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcat 9603818  T
Q  127 tactctt 133  Q
    |||||||    
T  9603817 tactctt 9603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 39688893 - 39688999
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcat 126  Q
    ||||| ||||||| ||| |||||| | || || || || | ||||||| ||||||||||||||| || |||||| |||  ||||||||| ||||||||||    
T  39688893 aaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcat 39688992  T
Q  127 tactctt 133  Q
     ||||||    
T  39688993 aactctt 39688999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 41470425 - 41470517
Alignment:
Q  40 gcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcattactct 132  Q
    ||||||||||| ||||| | ||||||||||||||| || | ||  | | ||||| |||||| ||| |||| ||||||||||||| ||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactct 41470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 6259982 - 6260101
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| ||||||||||| || | | ||||  | || | |||| ||||| ||| |||||||| ||||||||||||  || ||| ||    
T  6259982 agagaagaggagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatgg 6260081  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||| |||||||||||||||    
T  6260082 ttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  68 tcagattcttgtgtgggtgtcaaaggg-tgtattaccatctaagggtgtctatgtatcat 126  Q
    ||||||| ||||||||||||||| ||| |||||| ||| |||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 137
Target Start/End: Complemental strand, 33149579 - 33149550
Alignment:
Q  108 aagggtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||||||||||||||||    
T  33149579 aagggtgtctatgtatcattactctttttt 33149550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 2177483 - 2177439
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccac 56  Q
    |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  2177483 agagaagaggagaggaaagagaaaatgtgcttgtgtgggatccac 2177439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 136
Target Start/End: Complemental strand, 16115273 - 16115245
Alignment:
Q  108 aagggtgtctatgtatcattactcttttt 136  Q
    |||||||||||||||||||||||||||||    
T  16115273 aagggtgtctatgtatcattactcttttt 16115245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 39557498 - 39557590
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattacca 104  Q
    ||||||||||||| |||||| |||||||| ||||  ||| ||||  | |  |||||||||||| |||||||| ||| ||  ||||||||||||    
T  39557498 agagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattacca 39557590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 1179921 - 1180040
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  1179921 agagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 1180020  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  1180021 gtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 34012277 - 34012396
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  34012277 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagg 34012376  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  34012377 gtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 12831166 - 12831047
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||  || ||||||    
T  12831166 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagg 12831067  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  12831066 gtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 40423924 - 40424043
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||| ||| ||||||    
T  40423924 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagg 40424023  T
Q  112 gtgtctatgtatcattactc 131  Q
    || |||||||||||||||||    
T  40424024 gtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 14548041 - 14547920
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  14548041 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 14547942  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||| ||||||||    
T  14547941 gtgtctatgtatctttactctt 14547920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 15197448 - 15197333
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||    
T  15197448 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgt 15197349  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||||||||    
T  15197348 ctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 5957949 - 5957824
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| |||||     
T  5957949 agagaagaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaga 5957850  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
     |||||||||||||||||| ||||||    
T  5957849 atgtctatgtatcattactttttttt 5957824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 504102 - 504226
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| || ||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  504102 agagaagatgagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 504201  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
    |||||||||||||||||||| ||||    
T  504202 gtgtctatgtatcattactcatttt 504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 37038598 - 37038478
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||| | |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| |||| |    
T  37038598 agagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 37038499  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||||||||||||    
T  37038498 atgtctatgtatcattactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 10621068 - 10621182
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  |  |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10621068 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 10621167  T
Q  112 gtgtctatgtatcat 126  Q
     ||||||||||||||    
T  10621168 atgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 43414562 - 43414686
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||  | || |||||| ||||| |||||||||||||||||||||| || ||||||||||    
T  43414562 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaagg 43414661  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
     |||||||||||||| |||| ||||    
T  43414662 atgtctatgtatcataactcatttt 43414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 44507068 - 44507188
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||| ||||||| |||| ||||| | ||||||||||||||| |||||||||||| |||| ||||||||||| ||||||    
T  44507068 agagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagg 44507167  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||||||||||||||||||||    
T  44507168 gtgtctatgtatcattactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 23122578 - 23122697
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||| | ||||||||||||||| |||||||||||||||| |||||||| |||  |||||    
T  23122578 agagaacaggagagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagg 23122677  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  23122678 gtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 10284612 - 10284734
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| || || ||||| |||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||| |||||||  ||  |||||    
T  10284612 agagaagatgaaaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagg 10284711  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    ||||||||||||||| |||||||    
T  10284712 gtgtctatgtatcataactcttt 10284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 8841413 - 8841513
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||| | ||||||||| ||||| ||||||||||||||||||||||| | ||| ||||||    
T  8841413 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T
Q  112 g 112  Q
    |    
T  8841513 g 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 16383496 - 16383371
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  16383496 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 16383397  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    |||| |||||||||| ||||||||||    
T  16383396 gtgtttatgtatcataactctttttt 16383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15048162 - 15048281
Alignment:
Q  12 agagaagaggagagaaaa-gaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaag 110  Q
    ||||||||||||| |||| || |||||||||||||||||| ||||  |  |||||||||||||| |||||||| |||||||||||||||| ||| |||||    
T  15048162 agagaagaggagataaaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaag 15048260  T
Q  111 ggtgtctatgtatcattactc 131  Q
    | |||||||||||||| ||||    
T  15048261 gatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 9122304 - 9122229
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgt 87  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||    
T  9122304 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 4854844 - 4854965
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||||||||||||| || ||||  |  | || | ||||||| || ||| ||||| |||||||||||| ||| ||||||    
T  4854844 agagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaagg 4854943  T
Q  112 gtgtctatgtatcattactctt 133  Q
     |||||||||||||||||||||    
T  4854944 atgtctatgtatcattactctt 4854965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 30479455 - 30479580
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||| | |||| ||| | || ||||||||| || ||||| |||||||||||||||| ||| ||||||    
T  30479455 agagaagagaagaagaaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagg 30479554  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    |||| |||||||||| |||| |||||    
T  30479555 gtgtttatgtatcataactccttttt 30479580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 34307335 - 34307214
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| | || ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  34307335 agagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 34307236  T
Q  112 gtgtctatgtatcattactctt 133  Q
    |||| |||||||||| ||||||    
T  34307235 gtgtttatgtatcataactctt 34307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 15258910 - 15259031
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| ||| ||||||||||| || ||||| | || || ||||||||| || ||||| |||| | || |||||| |||||||||     
T  15258910 agagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaaga 15259009  T
Q  112 gtgtctatgtatcattactctt 133  Q
    || |||||||||||| ||||||    
T  15259010 gtatctatgtatcataactctt 15259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 24307774 - 24307895
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || | ||||||| ||||||||||||||| || |||||| ||| ||||||    
T  24307774 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagg 24307873  T
Q  112 gtgtctatgtatcattactctt 133  Q
    |||| |||||||||| ||||||    
T  24307874 gtgtttatgtatcataactctt 24307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 20074923 - 20075034
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||| ||||| ||||||||||||||| || |||||        |||||| ||| || |||||||||||||| ||||||| ||| ||||||    
T  20074923 agagaagagaagaggaaagagaaagtgtgcttgtgcagggtccac--------gtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaagg 20075014  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  20075015 atgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 24307692 - 24307622
Alignment:
Q  68 tcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcattactctttttta 138  Q
    ||||||| ||||||||||||||| || |||||| ||| |||||||||| |||||||||| |||||||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctttttta 24307622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 16056382 - 16056507
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| || ||||||  ||  |||||    
T  16056382 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagg 16056481  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
     ||| |||||||||| ||||||||||    
T  16056482 atgtttatgtatcataactctttttt 16056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 42221634 - 42221513
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||  ||||| |||||||||||||  ||| |||| || | ||||||||||||| ||||||||||||| | |  ||||||  || ||||||    
T  42221634 agagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaagg 42221535  T
Q  112 gtgtctatgtatcattactctt 133  Q
     ||| |||||||||||||||||    
T  42221534 atgtatatgtatcattactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 17443944 - 17443824
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| |||||||  ||||| ||| ||||||| ||||| ||||||||| ||||||| |||| ||   |||||||  || ||||||    
T  17443944 agagaagagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 17443845  T
Q  112 gtgtctatgtatcattactct 132  Q
     |||||||||||||| |||||    
T  17443844 ttgtctatgtatcataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 25838308 - 25838275
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgt 45  Q
    ||||||||||||||||||||||||||||||||||    
T  25838308 agagaagaggagagaaaagaaaaagtgtgcttgt 25838275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 14055573 - 14055692
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgc-gggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaag 110  Q
    ||||||||  |||| |||||||||||| |||||||  ||| ||||| | ||||| ||| ||||| |||||||| |||||| | |||||||  || |||||    
T  14055573 agagaagatcagaggaaagaaaaagtg-gcttgtgtaggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaag 14055671  T
Q  111 ggtgtctatgtatcattactc 131  Q
    |||||| ||||||||| ||||    
T  14055672 ggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 137
Target Start/End: Complemental strand, 34012237 - 34012208
Alignment:
Q  108 aagggtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||||||||||||||||    
T  34012237 aagggtgtctatgtatcattactctttttt 34012208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 38229547 - 38229470
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtca 89  Q
    ||||||||| |||| ||||| ||| ||||||||| | | |||||| | || || ||||||||| ||||||||||||||    
T  38229547 agagaagagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtca 38229470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17473139 - 17473020
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  17473139 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagg 17473040  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  17473039 gtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 9058599 - 9058478
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  9058599 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 9058500  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||||||||||    
T  9058499 gtgtctatgtatcattactctt 9058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 28863574 - 28863449
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  28863574 agagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 28863475  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||| ||| ||||    
T  28863474 gtgtctatgtatcattattctatttt 28863449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 7465716 - 7465836
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| |||| |||||| |||||||||||||| ||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  7465716 agagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagg 7465815  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||||||||||||||||||||    
T  7465816 gtgtctatgtatcattactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 19930801 - 19930917
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||| ||| ||||||    
T  19930801 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagg 19930900  T
Q  112 gtgtctatgtatcatta 128  Q
    |||||||||||||||||    
T  19930901 gtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 13438462 - 13438343
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||| ||||||  || ||||||    
T  13438462 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagg 13438363  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  13438362 gtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 33436081 - 33436204
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||| ||||| |||||||||||||||||| ||||| | ||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||    
T  33436081 agagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 33436180  T
Q  112 gtgtctatgtatcattactctttt 135  Q
    ||||||||||||||||||||||||    
T  33436181 gtgtctatgtatcattactctttt 33436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 40701597 - 40701478
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  40701597 agagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 40701498  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  40701497 gtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 10249367 - 10249484
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| ||||||||  || ||||||||||    
T  10249367 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgt 10249466  T
Q  116 ctatgtatcattactctt 133  Q
    ||||||||||||||||||    
T  10249467 ctatgtatcattactctt 10249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 32505629 - 32505749
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||| | |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| ||||||||  || ||||||    
T  32505629 agagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagg 32505728  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||||||||||||||||||||    
T  32505729 gtgtctatgtatcattactct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 5574479 - 5574589
Alignment:
Q  22 agagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgt 121  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||||||||| ||| ||||| ||||||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgt 5574578  T
Q  122 atcattactct 132  Q
    |||||||||||    
T  5574579 atcattactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 30915582 - 30915461
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||| | ||||||||||||||| || |||||| ||||||||||||||| ||| ||||||    
T  30915582 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagg 30915483  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||||||||||    
T  30915482 gtgtctatgtatcattactctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 4060804 - 4060685
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||| | ||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||||  || ||||||    
T  4060804 agagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagg 4060705  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  4060704 gtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 20700934 - 20700811
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| ||||||||||| |||||| ||||| | ||||||||||||||| |||||| || ||||||||||||||| |||  |||||    
T  20700934 agagaagaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataagg 20700835  T
Q  112 gtgtctatgtatcattactctttt 135  Q
     |||||||||||||||||||||||    
T  20700834 atgtctatgtatcattactctttt 20700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 28381636 - 28381755
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| |||||||||||||||||  ||||  | ||||||||||||||| ||||||||||||| || |||||||| ||| ||||||    
T  28381636 agagaagatgagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagg 28381735  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  28381736 gtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 38273123 - 38273246
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||| ||||||||||||| |||||||||| ||||||| ||||  |  |||||||||||||| |||||||||||| |||||||||||| |||||||||     
T  38273123 agagaataggagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaaga 38273222  T
Q  112 gtgtctatgtatcattactctttt 135  Q
     |||||||||||||| ||||||||    
T  38273223 atgtctatgtatcataactctttt 38273246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 40613885 - 40614002
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggt 113  Q
    |||| ||||||||||||| |||||||||||||||||| ||||  |  | |||||||||||| ||||||||||||||||||||||||| ||| |||||| |    
T  40613885 agaataggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggat 40613984  T
Q  114 gtctatgtatcattactc 131  Q
    ||||||||||||| ||||    
T  40613985 gtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 27864808 - 27864704
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcat 126  Q
    ||||| ||||||||||| |||||| ||||| | | ||||||||||||| |||||||| |||||||||||||||| |||  ||||||||||||||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  127 tactc 131  Q
    |||||    
T  27864708 tactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 41575257 - 41575138
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgc-gggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaag 110  Q
    |||||||||||||  ||||| ||||||||||||||  ||| ||||||| || || ||||| ||| |||||||  ||||||||||||||||||||||||||    
T  41575257 agagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaag 41575158  T
Q  111 ggtgtctatgtatcattact 130  Q
    | ||||||||||||||||||    
T  41575157 gatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 38882802 - 38882916
Alignment:
Q  22 agagaaaagaaaaagtgtgcttgtgcggga---tccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtcta 118  Q
    |||||||||| |||||| |||||||||||    ||||| | ||||||||||||||| |||||||| ||||||||||| |||| ||| |||||||||||||    
T  38882802 agagaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtcta 38882900  T
Q  119 tgtatcattactcttt 134  Q
    ||||||||||||||||    
T  38882901 tgtatcattactcttt 38882916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 42257310 - 42257189
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggt 113  Q
    |||||||||||||||||| |||||||||||||||||| ||||  |  | |||||||||||| || ||||||||||||| | |||||| ||| |||| | |    
T  42257310 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagat 42257211  T
Q  114 gtctatgtatcattactctttt 135  Q
    ||||||||||||| ||||||||    
T  42257210 gtctatgtatcataactctttt 42257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 2533242 - 2533123
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||| ||||||||||||||||||||||||| || |  |  |||||||||||||| |||||| ||||||||||| |||||| |||  |||||    
T  2533242 agagaagaggagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaagg 2533144  T
Q  112 gtgtctatgtatcattactct 132  Q
     |||||||||||||| |||||    
T  2533143 atgtctatgtatcataactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 33436330 - 33436210
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||| || ||||| |||||||||||||||    |||||||    |||||||||||| || ||||||||||||| |||||||| ||||||||||    
T  33436330 agagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaagg 33436231  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||||||||||||    
T  33436230 atgtctatgtatcattactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 26891485 - 26891607
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||| ||||| ||| ||||||||| || | ||||| | || || ||||||||| ||||||||||||| | ||||||||| ||| ||||||    
T  26891485 agagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagg 26891584  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    ||| ||||||||||| |||||||    
T  26891585 gtggctatgtatcataactcttt 26891607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 3440098 - 3439985
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||| |||  || ||| ||||| ||||||||||||| | | ||||||| ||| ||||||    
T  3440098 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagg 3439999  T
Q  112 gtgtctatgtatca 125  Q
    ||||||| ||||||    
T  3439998 gtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 36168955 - 36168835
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||| ||||||||||||| ||||| |||||||||||| ||||  |  | |||||||| ||| ||||||||| || ||||| ||||||  |||||||||    
T  36168955 agagaataggagagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaagg 36168856  T
Q  112 gtgtctatgtatcattactct 132  Q
     |||||||||||||| |||||    
T  36168855 atgtctatgtatcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 17819985 - 17820104
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| ||| |||| ||||| ||| ||||| |||| || ||||||||| ||||||||||||||| ||||||||| ||| |||  |    
T  17819985 agagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatag 17820084  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  17820085 ttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 43490240 - 43490121
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| |||||||||  || ||||||    
T  43490240 agagaagagaagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagg 43490141  T
Q  112 gtgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  43490140 gtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 13365472 - 13365345
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||    || ||||||||| ||||||||||||||| |||| |||| ||||||||||    
T  13365472 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T
Q  112 --gtgtctatgtatcattactctttttt 137  Q
      |||| |||||||||| ||||||||||    
T  13365372 gtgtgtttatgtatcataactctttttt 13365345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38732473 - 38732354
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| || || || ||||||||| ||||||||||||||| || ||||||  ||  |||||    
T  38732473 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagg 38732374  T
Q  112 gtgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  38732373 gtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 2997468 - 2997569
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  2997468 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T
Q  112 gt 113  Q
    ||    
T  2997568 gt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 3738060 - 3737986
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtc 88  Q
    |||||||||||| ||| | ||| |||||||||||||| ||||||| || || ||||||||| |||||||||||||    
T  3738060 agaagaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 17823853 - 17823782
Alignment:
Q  62 tacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcattactctt 133  Q
    ||||||||||||| ||||||||||||  | |  |||||| ||| |||||| ||| |||||||||||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactctt 17823782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 44152046 - 44151928
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggat---ccacataactacgtgtcaga-ttcttgtgtgggtgtcaaagggtgtattaccatct 107  Q
    |||||||||||||  ||||| |||||||||||||| |||||   | ||||||| |||||||||| || || ||| ||||| |||| |||||||  || ||    
T  44152046 agagaagaggagatgaaagagaaagtgtgcttgtgtgggattcactacataaccacgtgtcagattttttttgtaggtgttaaagagtgtattgtcacct 44151947  T
Q  108 aagggtgtctatgtatcat 126  Q
    |  | ||||||||||||||    
T  44151946 atagttgtctatgtatcat 44151928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 5e-47; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 47452301 - 47452420
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  47452301 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 47452400  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  47452401 gtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 2582034 - 2581912
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||| | |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  2582034 agagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 2581935  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||||||||||||||||||||||    
T  2581934 gtgtctatgtatcattactcttt 2581912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 9474857 - 9474976
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  9474857 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 9474956  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  9474957 gtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 38632302 - 38632423
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||| ||| ||| |||||||| ||| ||||||    
T  38632302 agagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagg 38632401  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||||||||||    
T  38632402 gtgtctatgtatcattactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 38595273 - 38595149
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| |||| |    
T  38595273 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 38595174  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
    |||| ||||||||||||||||||||    
T  38595173 gtgtttatgtatcattactcttttt 38595149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 51898664 - 51898784
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||| | |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| |||| |    
T  51898664 agagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 51898763  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||||||||||||    
T  51898764 atgtctatgtatcattactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 3000438 - 3000319
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  3000438 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 3000339  T
Q  112 gtgtctatgtatcattactc 131  Q
    |||| |||||||||||||||    
T  3000338 gtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 27564716 - 27564835
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | | ||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  27564716 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 27564815  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  27564816 atgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 48716263 - 48716382
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||| ||||||| |||||||| ||| ||||||    
T  48716263 agagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagg 48716362  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  48716363 gtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 8346373 - 8346494
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||||||||| ||||||||||||||| || ||||| | ||||||||||||||| |||||||||||||||| |||||||| ||| |||| ||||     
T  8346373 aagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtga 8346472  T
Q  116 ctatgtatcattactctttttt 137  Q
    ||||||||||||||||||||||    
T  8346473 ctatgtatcattactctttttt 8346494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 41758924 - 41758804
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||  | ||||||||||||||| |||||||| |||||||||||||||| |||| ||| |    
T  41758924 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatg 41758825  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||||||||||||||||||||    
T  41758824 gtgtctatgtatcattactct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 50630577 - 50630457
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||  |||||| |||||| ||| ||||||    
T  50630577 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagg 50630478  T
Q  112 gtgtctatgtatcattactct 132  Q
    || ||||||||||||||||||    
T  50630477 gtatctatgtatcattactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 32813366 - 32813244
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||  | || |||||||||||| |||||||||||| |||||||||||| ||| ||||||    
T  32813366 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagg 32813267  T
Q  112 gtgtctatgtatcattactcttt 134  Q
     |||||||||||||| |||||||    
T  32813266 atgtctatgtatcataactcttt 32813244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 44548357 - 44548473
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||| ||||| |||||||| ||| |||| |    
T  44548357 agagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaag 44548456  T
Q  112 gtgtctatgtatcatta 128  Q
     ||||||||||||||||    
T  44548457 atgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 37649317 - 37649198
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||  ||||||||||||||||| || ||| | || |||||||||||| ||||||||||||||||| ||||||| ||| |||| |    
T  37649317 agagaagaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaag 37649218  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  37649217 atgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 43251 - 43132
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||| |||||||||||||| |||||||||||||||||  ||||| | ||||||||||||||| |||||||||||||||||| ||||||  |  |||||     
T  43251 agagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaaga 43152  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  43151 ctgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 11152359 - 11152476
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||| | |||| ||||||||||||| || |||| ||||||||||||||| |||||||| |||| ||||||||||| ||| |||| |    
T  11152359 agagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-g 11152457  T
Q  112 gtgtctatgtatcattact 130  Q
    |||||||||| ||||||||    
T  11152458 gtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 49811508 - 49811629
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||  || | ||  |||||||||||||| |||||||| ||||||| ||||||||  || ||||||    
T  49811508 agagaagaggagagaaaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaagg 49811607  T
Q  112 gtgtctatgtatcattactctt 133  Q
     ||||||| |||||| ||||||    
T  49811608 atgtctatctatcataactctt 49811629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 26274542 - 26274430
Alignment:
Q  21 gagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatg 120  Q
    ||||||||||||||||||| ||||||| |||||||| | |||| |||||||||| || ||||| ||||||| | |||||| |||  ||||||||||||||    
T  26274542 gagagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatg 26274443  T
Q  121 tatcattactctt 133  Q
    |||||||| ||||    
T  26274442 tatcattattctt 26274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 44454098 - 44453984
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||| |||| || ||||||||| |||||||||| ||||  | |||||| |||  ||| |    
T  44454098 agagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaag 44453999  T
Q  112 gtgtctatgtatcat 126  Q
    |||||||||||||||    
T  44453998 gtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 5958981 - 5959105
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| || || || ||||||||| |||||||||||||||  |||||||| |||  |||||    
T  5958981 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagg 5959080  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
    |||| |||||||||| |||||||||    
T  5959081 gtgtttatgtatcataactcttttt 5959105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 26440844 - 26440741
Alignment:
Q  21 gagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatg 120  Q
    ||||||||||| ||||||||||| |||||||||||  |  | |||||||||||| |||||||||||| ||||||||||||  ||||||||| |||||||     
T  26440844 gagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatc 26440745  T
Q  121 tatc 124  Q
    ||||    
T  26440744 tatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 50590981 - 50591100
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  50590981 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 50591080  T
Q  112 gtgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  50591081 gtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 13414880 - 13414792
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtatt 100  Q
    |||||||| || |||||||| ||| |||||||||| ||| ||||| | ||||||||| ||||| |||||||||||||||||||||||||    
T  13414880 agagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtatt 13414792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 23597072 - 23597194
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||| ||||||||||||| |||||||| ||||||  | || || |  | |||||||||||| || ||||||| |||||| ||||||| ||| |||| |    
T  23597072 agagaataggagagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatg 23597171  T
Q  112 gtgtctatgtatcattactcttt 134  Q
     ||||||||||||||||||||||    
T  23597172 atgtctatgtatcattactcttt 23597194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 45044541 - 45044662
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| ||| |||| ||||||||| ||||  |  |||| ||||||||| |||| ||||||||||| |||||||| ||| ||||||    
T  45044541 agagaagagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagg 45044640  T
Q  112 gtgtctatgtatcattactctt 133  Q
       | |||||||||| ||||||    
T  45044641 aaatgtatgtatcataactctt 45044662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 37926419 - 37926539
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| ||||||| ||||| |||||||||  |  | |||||||||||| || ||||||||| ||| | |||||| ||| |||| |    
T  37926419 agagaagagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaag 37926518  T
Q  112 gtgtctatgtatcattactct 132  Q
     | |||||||||||| |||||    
T  37926519 atatctatgtatcataactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 48489419 - 48489343
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtc 88  Q
    |||||||||| ||||||| | ||| |||||||||||||||||||| | || || ||||||||| |||||||| ||||    
T  48489419 agagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 47748561 - 47748443
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||| | ||||||||||||||| ||  | || ||||||||| || | |||||||| ||||||||||| ||| ||||||    
T  47748561 agagaagagaagaagaaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtc-aagggtgtattgccacctaagg 47748463  T
Q  112 gtgtctatgtatcattactc 131  Q
    || | |||||||||| ||||    
T  47748462 gtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 3302514 - 3302633
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||  ||| | |||||||||||||  ||| |||| || | ||||||||||||| ||||||||||||| | |  | ||||  || ||||||    
T  3302514 agagaagatgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaagg 3302613  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||| |||||||||||||||    
T  3302614 atgtatatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 6260989 - 6260870
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||| | ||| ||||||| |||||| ||||| | || || ||| ||||| || |||||||||  | ||||||||||||| ||||||    
T  6260989 agagaagaggagaagaaatagaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaagg 6260890  T
Q  112 gtgtctatgtatcattactc 131  Q
     | ||||| |||||| ||||    
T  6260889 atatctatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 6034163 - 6034044
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  6034163 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 6034064  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  6034063 gtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 480428 - 480553
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||| | ||||||||||||||| |||||||||||||||||||||||||  || ||||||    
T  480428 agagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagg 480527  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||||||||||||    
T  480528 gtgtctatgtatcattactctttttt 480553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 48183030 - 48183151
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| |||  |||||    
T  48183030 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagg 48183129  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||||||||||    
T  48183130 gtgtctatgtatcattactctt 48183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 50052409 - 50052534
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  50052409 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 50052508  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
     |||||||||||||||||||||||||    
T  50052509 atgtctatgtatcattactctttttt 50052534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 42044348 - 42044474
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||  |||| |||||| ||| ||||||    
T  42044348 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagg 42044447  T
Q  112 gtgtctatgtatcattactctttttta 138  Q
    |||||||||||||||||||||||||||    
T  42044448 gtgtctatgtatcattactctttttta 42044474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 29234226 - 29234346
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||  ||| |||||||||||||| ||||||||||    
T  29234226 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagg 29234325  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||||||||||||||||||||    
T  29234326 gtgtctatgtatcattactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 11511443 - 11511562
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||| | ||||||||||||||| || |||||||||||||||||||||| ||| ||||||    
T  11511443 agagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 11511542  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  11511543 gtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 41236466 - 41236347
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||| ||||||| |||||||| ||| ||||||    
T  41236466 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagg 41236367  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  41236366 gtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 54473514 - 54473633
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||| ||||| |||||||||||||||| ||||||||  || ||||||    
T  54473514 agagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagg 54473613  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  54473614 gtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 24995088 - 24995209
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||| | ||||||||||| ||| || |||||||||||||||||||||| ||||||||||    
T  24995088 agagaagaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagg 24995187  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||| || |||||||||||||    
T  24995188 gtgtccatatatcattactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 40574898 - 40574779
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||||||||||| |||||||||  || |  ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  40574898 agagaagaggagagaaaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 40574799  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  40574798 atgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 29240005 - 29239883
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||||| | ||||||||| ||||| |||||||| ||||||| |||||||| ||| ||||||    
T  29240005 agagaagaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagg 29239906  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||||||||||||||||||||||    
T  29239905 gtgtctatgtatcattactcttt 29239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 23608354 - 23608233
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||| |||||| |||||||||||||| ||  | ||| | ||||||||||||||| |||||||||||||||| ||||||||  |||||||||    
T  23608354 agagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagg 23608255  T
Q  112 gtgtctatgtatcattactctt 133  Q
    |||||||| |||||||||||||    
T  23608254 gtgtctatatatcattactctt 23608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 50526152 - 50526271
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||| | |||| |||||||||||| |||||| | || |||||||||||| ||||||||||||||||||||||||| ||| |||| |    
T  50526152 agagaagaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 50526251  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  50526252 atgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 3481773 - 3481654
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| | ||| ||||| |||||||||||||| ||| ||||| | |||| |||||||||| ||||||||||||||||| ||||||| ||| |||| |    
T  3481773 agagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaag 3481674  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  3481673 gtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 53352547 - 53352660
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||| |||||| ||||| ||||  ||||||  || ||||||    
T  53352547 agagaagaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtatt-gcacctaagg 53352645  T
Q  112 gtgtctatgtatcat 126  Q
    |||||||||||||||    
T  53352646 gtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 31910311 - 31910192
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||  |  ||| |||||||||| ||||||||||||||||| |||||||  || ||||||    
T  31910311 agagaagatgagagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaagg 31910212  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  31910211 atgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 50813873 - 50813993
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| | || || || || ||||||||| ||||||||||||||| ||||||||||||| |||||     
T  50813873 agagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaaga 50813972  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||| |||||||||| |||||    
T  50813973 gtgtttatgtatcataactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 29977989 - 29977883
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcat 126  Q
    ||||| |||||||||||||| ||| |||| || ||||||||||||||| |||||||||||| || ||||||||| ||| ||| || | | ||||||||||    
T  29977989 aaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcat 29977890  T
Q  127 tactctt 133  Q
    |||||||    
T  29977889 tactctt 29977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 29547940 - 29548061
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||||||||||| ||| ||||||||||| ||  | || ||||||||| ||||||||||||||| || |||||| ||| ||||||    
T  29547940 agagaagagaagaagaaagaaaaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaagg 29548039  T
Q  112 gtgtctatgtatcattactctt 133  Q
     ||| |||||||||| ||||||    
T  29548040 atgtttatgtatcataactctt 29548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 41824001 - 41823920
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagg 93  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||  | ||||||||||||||| |||||||||||| |||||    
T  41824001 agagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 47104663 - 47104542
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| |||||||| ||||| ||| || | | ||| |||||||| ||| |||||||||||||| || |||||||  ||||||||     
T  47104663 agagaagaggagatgaaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaaga 47104564  T
Q  112 gtgtctatgtatcattactctt 133  Q
     ||||||| |||||||||||||    
T  47104563 atgtctatatatcattactctt 47104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 55475310 - 55475189
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| ||| ||| || |||| ||  | || ||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  55475310 agagaagagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 55475211  T
Q  112 gtgtctatgtatcattactctt 133  Q
     ||| |||||||||| ||||||    
T  55475210 atgtttatgtatcataactctt 55475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 17983724 - 17983825
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  17983724 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T
Q  112 gt 113  Q
    ||    
T  17983824 gt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 28480249 - 28480369
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  || || |||||||| ||||| ||| ||||||| ||||| ||||||||| ||||||| |||| ||   |||||||  || ||||||    
T  28480249 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28480348  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||| || |||||    
T  28480349 ttgtctatgtattataactct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 28481124 - 28481244
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  || || |||||||| ||||| ||| ||||||| ||||| ||||||||| ||||||| |||| ||   |||||||  || ||||||    
T  28481124 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28481223  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||| || |||||    
T  28481224 ttgtctatgtattataactct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 28481999 - 28482119
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  || || |||||||| ||||| ||| ||||||| ||||| ||||||||| ||||||| |||| ||   |||||||  || ||||||    
T  28481999 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28482098  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||| || |||||    
T  28482099 ttgtctatgtattataactct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 56300146 - 56300225
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaa 91  Q
    |||||||||||||| ||||| |||||||| |||||| |||| || || || || ||||||||| |||||||| |||||||    
T  56300146 agagaagaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaa 56300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 48647707 - 48647828
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| ||| |||||||||||||  ||||| | || |||||| ||||| || ||||||||| ||  ||||||||   | ||||||    
T  48647707 agagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaagg 48647806  T
Q  112 gtgtctatgtatcattactctt 133  Q
     ||| ||||| |||| ||||||    
T  48647807 atgtttatgtgtcataactctt 48647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 8343144 - 8343263
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||| | ||| |||||| |||| ||  | || ||||||||| || ||| ||||||||||| |||||| ||| ||||||    
T  8343144 agagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaagg 8343243  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  8343244 atgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 29589721 - 29589831
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||| ||| |||| ||  | || | ||||||| ||||||||||||||| |||||||||  || ||||||    
T  29589721 agagaagagaagaagaaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtatt-gcaactaagg 29589819  T
Q  112 gtgtctatgtat 123  Q
    |||| |||||||    
T  29589820 gtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 44536727 - 44536846
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| ||| || ||| || | || || || ||||||||| |||||||| |||||| ||||||||| ||| ||||      
T  44536727 agagaagagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaa 44536825  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||| |||||||||| |||||    
T  44536826 gtgtttatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 49607529 - 49607410
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  49607529 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgt 49607430  T
Q  116 ctatgtatcattactctttt 135  Q
    ||||||||||||||||||||    
T  49607429 ctatgtatcattactctttt 49607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 53982130 - 53982011
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  53982130 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 53982031  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  53982030 gtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 33644319 - 33644200
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||    
T  33644319 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagg 33644220  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  33644219 gtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 31456804 - 31456683
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||  ||| ||||||    
T  31456804 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgt 31456705  T
Q  116 ctatgtatcattactctttttt 137  Q
    ||||||||||||||| ||||||    
T  31456704 ctatgtatcattactttttttt 31456683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 54868876 - 54868997
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  54868876 agagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 54868975  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||||||||||    
T  54868976 gtgtctatgtatcattactctt 54868997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 27714882 - 27714993
Alignment:
Q  22 agagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgt 121  Q
    ||||| |||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  27714882 agagagaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgt 27714981  T
Q  122 atcattactctt 133  Q
    ||||||||||||    
T  27714982 atcattactctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 52629419 - 52629305
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  52629419 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 52629320  T
Q  112 gtgtctatgtatcat 126  Q
    |||||||||||||||    
T  52629319 gtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 8076512 - 8076393
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||| | ||||||||| ||||| ||||||||||||||||||||||| | ||| ||||||    
T  8076512 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8076413  T
Q  112 gtgtctatgtatcattactc 131  Q
    |||| |||||||||||||||    
T  8076412 gtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 36707409 - 36707527
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||  || ||||||    
T  36707409 agagaagaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagg 36707504  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    || ||||||||||||||||||||    
T  36707505 gtatctatgtatcattactcttt 36707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 17470524 - 17470404
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| |||||||||||||| ||| ||||| | ||||||||||||||| |||||||||||| ||| |||||||| ||| |||| |    
T  17470524 agagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaag 17470425  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||||||||||||||||||||    
T  17470424 gtgtctatgtatcattactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 48587081 - 48587187
Alignment:
Q  21 gagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatg 120  Q
    ||||||||||| ||||||| |||||||||||||||| | ||||||||||||||| || ||| |||||||||||||||||| ||| |||||||| ||||||    
T  48587081 gagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatg 48587180  T
Q  121 tatcatt 127  Q
    |||||||    
T  48587181 tatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 26141515 - 26141632
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggt 113  Q
    |||||||||||||||||| |||||||||||||| ||| ||||  | || |||||||||||| |||||||||||| |||||||||||| ||| |||||| |    
T  26141515 agaagaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggat 26141614  T
Q  114 gtctatgtatcattactc 131  Q
    ||||||||||||| ||||    
T  26141615 gtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 11095346 - 11095455
Alignment:
Q  22 agagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgt 121  Q
    |||||||||| |||||||| || |||||| |  || | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11095346 agagaaaagagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgt 11095443  T
Q  122 atcattactctt 133  Q
    ||||||||||||    
T  11095444 atcattactctt 11095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 33118838 - 33118953
Alignment:
Q  18 gaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtct 117  Q
    |||||||| ||||| |||||||| || || ||||||||| | ||||||||||| ||| |||||||||||||||||||||||||  || ||||||||||||    
T  33118838 gaggagaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtct 33118937  T
Q  118 atgtatcattactctt 133  Q
    ||||||||| ||||||    
T  33118938 atgtatcataactctt 33118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 47531984 - 47531865
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||| ||||||||||||| |||||||||||||||||| | || ||  | ||||||||||||||||||||| ||| ||| |||||||| ||||||||||    
T  47531984 agagaataggagagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaagg 47531885  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  47531884 atgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 9563118 - 9562998
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||| ||| |||||||| |||||| |||||||| | ||||||||||||||| || | ||| ||||||||| ||||||  ||||||| |    
T  9563118 agagaagaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatg 9563019  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||| ||||||||||||||||    
T  9563018 gtgtttatgtatcattactct 9562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 30801714 - 30801829
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||| ||||| ||| |||||||||| ||| |||| || ||||| ||||| ||| |||||||||| ||||||||||||||| || ||||||    
T  30801714 agagaagatgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagg 30801813  T
Q  112 gtgtctatgtatcatt 127  Q
    ||||||||||||||||    
T  30801814 gtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 11347903 - 11348026
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||||||||| ||| || ||||  |  | |||||||||||| |||||||| ||||||||| ||||||  || ||||||    
T  11347903 agagaagaggagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaagg 11348002  T
Q  112 gtgtctatgtatcattactctttt 135  Q
     |||||||||||||| ||||||||    
T  11348003 atgtctatgtatcataactctttt 11348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 20764896 - 20765015
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||  |  | |||||||||||| |||||||||||| |||| ||||||||||| ||||||    
T  20764896 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagg 20764995  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||||||||| |||| ||||    
T  20764996 atgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 51419341 - 51419460
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||| ||||||||||||| |||||||||||||||||| || |  |  | |||||||||||| |||||||||||| ||||| ||||||  |||||||||    
T  51419341 agagaataggagagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaagg 51419440  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  51419441 atgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 26754814 - 26754700
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||  | || || ||||||||| |||||||| |||| ||||||||||| ||| ||||||    
T  26754814 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagg 26754715  T
Q  112 gtgtctatgtatcat 126  Q
    ||||||||| |||||    
T  26754714 gtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 24699935 - 24700055
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||| |||| | || ||||| |  | ||||| |||||| || ||||||||||||| |||||||| ||| ||||||    
T  24699935 agagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaagg 24700034  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||||||||||||    
T  24700035 atgtctatgtatcattactct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 11907488 - 11907369
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggt 113  Q
    |||||||||||||||||| ||| |||||||||||||| |||| || || || ||||||||| ||||||| ||||  | | |||||||  || ||||||||    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  114 gtctatgtatcattactctt 133  Q
    ||||||||||||| ||||||    
T  11907388 gtctatgtatcataactctt 11907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 14623820 - 14623939
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| |||||||||||||| | | ||||||| |  || ||||||||| || |||||||||||| ||||||||| ||| ||||||    
T  14623820 agagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 14623919  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  14623920 atgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 41189747 - 41189866
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggt 113  Q
    |||||||||||||||||| |||||||||||||||||| ||||  |  | |||||||| ||| || ||||||||||||| | |||||| ||| |||||| |    
T  41189747 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggat 41189846  T
Q  114 gtctatgtatcattactctt 133  Q
    || |||||||||| ||||||    
T  41189847 gtatatgtatcataactctt 41189866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 13898036 - 13898154
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| |||||||||||||| | | ||||||| |  |||||||||||| || |||||||||||| ||||||||| ||| ||||||    
T  13898036 agagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 13898135  T
Q  112 gtgtctatgtatcattact 130  Q
     ||| ||| ||||||||||    
T  13898136 atgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 35536745 - 35536625
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  |||||  |||||||||||||   | ||||||| || |||||||| ||| || ||||||||||||| |||||||| |||  |||||    
T  35536745 agagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataagg 35536646  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||||||||||||    
T  35536645 atgtctatgtatcattactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 35965767 - 35965876
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||| ||||| ||||||||||||||| ||||||||        |||||||||| || ||||||||||||||| ||||||| ||  ||||| |||    
T  35965767 aagaggagaggaaagagaaagtgtgcttgtgcaggatccac--------gtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgt 35965858  T
Q  116 ctatgtatcattactctt 133  Q
     |||||||||||||||||    
T  35965859 atatgtatcattactctt 35965876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 41080826 - 41080709
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| ||| |||||||||| ||| ||||||| || || | ||||||| ||| |||||||||||||||||| || | | ||||||    
T  41080826 agagaagaggagatgaaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaagg 41080729  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  41080728 atgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 8956881 - 8956761
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  |||||  |||||||||||||   | ||||||| |  |||||||| ||| || ||||||||||||||| |||||| |||  |||||    
T  8956881 agagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataagg 8956782  T
Q  112 gtgtctatgtatcattactct 132  Q
     ||||||||||||||||||||    
T  8956781 atgtctatgtatcattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 25407128 - 25407245
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcaga-ttcttgtgtgggtgtcaaagggtgtattaccatctaag 110  Q
    |||||||||||||  ||||| |||||||| ||||| |||||||| || |  |||||||||| || ||||||| ||||||| |||| |||| ||| ||| |    
T  25407128 agagaagaggagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatg 25407227  T
Q  111 ggtgtctatgtatcatta 128  Q
    | ||| ||||||||||||    
T  25407228 gttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 36331416 - 36331479
Alignment:
Q  69 cagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcattactct 132  Q
    |||||| |||||||| |||||| ||||| ||| |||||||||||||| |||||||||| |||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 45058534 - 45058652
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||| | |||||||||| |||| ||    || ||||||||| || |||||||||||| ||||||||| ||| ||||||    
T  45058534 agagaagagaagaagaaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagg 45058632  T
Q  112 gtgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  45058633 gtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 36331310 - 36331407
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaa 109  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||| ||| ||| ||||    
T  36331310 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 42823215 - 42823116
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcat 126  Q
    ||||| ||||| | ||| |||||| |||| || || || ||||| ||| || |||||||||||| |||||||||||||  ||| ||||| ||||||||||    
T  42823215 aaagagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 137
Target Start/End: Complemental strand, 48587042 - 48587013
Alignment:
Q  108 aagggtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||||||||||||||||    
T  48587042 aagggtgtctatgtatcattactctttttt 48587013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 1758437 - 1758560
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaa--agggtgtattaccatctaa 109  Q
    |||||||||||||  ||||| ||| |||| ||||| ||  ||||| |||| |  ||||||||| |||||||||||||||   ||||||||| | | |||     
T  1758437 agagaagaggagatgaaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctat 1758536  T
Q  110 gggtgtctatgtatcattactctt 133  Q
    || || ||||||||||| ||||||    
T  1758537 ggttgactatgtatcataactctt 1758560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 32869797 - 32869678
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  32869797 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 32869698  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||| ||||||    
T  32869697 gtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 22880639 - 22880755
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||| | ||||||||||||||||||||||||| ||| ||||||    
T  22880639 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagg 22880738  T
Q  112 gtgtctatgtatcatta 128  Q
    |||||||||||||||||    
T  22880739 gtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 11427737 - 11427615
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatcta--a 109  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| |||||| ||| |||  |    
T  11427737 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaaga 11427638  T
Q  110 gggtgtctatgtatcattactct 132  Q
    |||||||||||||||||||||||    
T  11427637 gggtgtctatgtatcattactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 29857946 - 29857827
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||| |||||||| |    
T  29857946 agagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaag 29857847  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  29857846 gtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 17598673 - 17598549
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | || |||||||||||| |||||||||||||||| | |||||| ||| ||||||    
T  17598673 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagg 17598574  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
    |||||||||||||||||||| ||||    
T  17598573 gtgtctatgtatcattactcatttt 17598549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 6209446 - 6209568
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||| | |||||||| |||||| ||||||| ||||||||  ||||||| ||| ||||||    
T  6209446 agagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagg 6209545  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||||||||||||||||||||||    
T  6209546 gtgtctatgtatcattactcttt 6209568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 23128112 - 23128231
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||| ||  ||| |||||    
T  23128112 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgt 23128211  T
Q  116 ctatgtatcattactctttt 135  Q
    |||| |||||||| ||||||    
T  23128212 ctatatatcattattctttt 23128231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 31976367 - 31976247
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| | ||  | || |||||||||||| |||||||||||| ||||||| |||| ||| ||||||    
T  31976367 agagaagaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaagg 31976268  T
Q  112 gtgtctatgtatcattactct 132  Q
     |||||||||||||| |||||    
T  31976267 atgtctatgtatcataactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 31109385 - 31109500
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    |||||||||||||||| ||||||| ||| |||||| || || | ||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  31109385 aagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 31109484  T
Q  116 ctatgtatcattactc 131  Q
    ||||  ||||||||||    
T  31109485 ctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 946495 - 946371
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||| | |||||||  || | |||| |||||||||| ||| || ||||||||||||||||||| || ||||||    
T  946495 agagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaagg 946396  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
     |||||||||||| ||||| |||||    
T  946395 atgtctatgtatcgttacttttttt 946371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 30341341 - 30341463
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  30341341 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 30341440  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||| |||||||||| |||||||    
T  30341441 gtgtttatgtatcataactcttt 30341463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 12732601 - 12732476
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| ||| ||||||| || |||||||||||| | |||||||||||| ||||||||||||||| |  | |||| |||  ||||     
T  12732601 agagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaaga 12732502  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
     |||||||||||||||||||||||||    
T  12732501 atgtctatgtatcattactctttttt 12732476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 15832694 - 15832573
Alignment:
Q  14 agaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggt 113  Q
    ||||||||||| |||||| ||| |||  |||||| |||||||| | ||||||||||| ||| |||||||||||||||| | | ||||  || |||| |||    
T  15832694 agaagaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggt 15832595  T
Q  114 gtctatgtatcattactctttt 135  Q
    ||||||||||||||||||||||    
T  15832594 gtctatgtatcattactctttt 15832573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 15990023 - 15990144
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  15990023 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 15990122  T
Q  112 gtgtctatgtatcattactctt 133  Q
    |||| |||||||||| ||||||    
T  15990123 gtgtttatgtatcataactctt 15990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 31110742 - 31110863
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| ||||||||||||||| || ||||  |   ||||||||||||| ||||| |  |||||||||||||||| ||| ||||||    
T  31110742 agagaagagtagagaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaagg 31110839  T
Q  112 gtgtctatgtatcattactctttt 135  Q
     |||||||||||||| ||||||||    
T  31110840 atgtctatgtatcataactctttt 31110863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15508005 - 15508124
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  15508005 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 15508104  T
Q  112 gtgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  15508105 gtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 28536472 - 28536582
Alignment:
Q  15 gaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtg 114  Q
    |||||| ||| |||||| |||||||||||||| ||| ||||||| ||  ||||||||||| ||||||||||||||| || |||||| ||| |||||| ||    
T  28536472 gaagagaagataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatg 28536569  T
Q  115 tctatgtatcatt 127  Q
    | |||||||||||    
T  28536570 tttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 31953011 - 31953130
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| |||||||| ||||| | | ||||||| |  || ||||||||| || |||||||||||| ||||||||| ||| ||||||    
T  31953011 agagaagagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 31953110  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||||||| |||||||||||    
T  31953111 atgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 4231667 - 4231548
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||  | |||||||||||| ||||||||||| ||| ||||||||| ||| |||| |    
T  4231667 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatg 4231568  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||| |||| ||||| ||||    
T  4231567 atgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 9379708 - 9379807
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcat 126  Q
    ||||| ||| |||| ||||| | |||||||||  | |||||||| ||| |||| |||||||||| || ||||||  ||||||||| ||||||||||||||    
T  9379708 aaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 32869837 - 32869866
Alignment:
Q  108 aagggtgtctatgtatcattactctttttt 137  Q
    ||||||||||||||||||||||||||||||    
T  32869837 aagggtgtctatgtatcattactctttttt 32869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 8080364 - 8080485
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| || ||| |||||||||||||||||| ||| ||||||    
T  8080364 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagg 8080463  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||||||||||    
T  8080464 gtgtctatgtatcattactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 3784114 - 3783998
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| | |||||| ||| ||||||    
T  3784114 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagg 3784015  T
Q  112 gtgtctatgtatcatta 128  Q
    |||||||||||||||||    
T  3784014 gtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38267159 - 38267040
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||  ||  |||||    
T  38267159 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagg 38267060  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  38267059 gtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 38837336 - 38837213
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||| |||||  ||||||||||| ||| ||||||    
T  38837336 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagg 38837237  T
Q  112 gtgtctatgtatcattactctttt 135  Q
    ||||||||||||||||||||||||    
T  38837236 gtgtctatgtatcattactctttt 38837213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 7389501 - 7389387
Alignment:
Q  19 aggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtcta 118  Q
    ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||    
T  7389501 aggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtcta 7389402  T
Q  119 tgtatcattactctt 133  Q
    |||||||||||||||    
T  7389401 tgtatcattactctt 7389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 35137652 - 35137527
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||| | ||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||    
T  35137652 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 35137553  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    |||||||| ||||||||||| |||||    
T  35137552 gtgtctatttatcattactcattttt 35137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 3434672 - 3434561
Alignment:
Q  21 gagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatg 120  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||||||||||| ||| |||||| ||||||||    
T  3434672 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 3434573  T
Q  121 tatcattactct 132  Q
    ||||||||||||    
T  3434572 tatcattactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 4999495 - 4999614
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||||| |||||| |||||||| ||||||||| ||||| | ||||||| ||||||| |||||||||||||||| |||||||| ||||||||||    
T  4999495 agagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagg 4999594  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  4999595 gtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 19329961 - 19329842
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | | ||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  19329961 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 19329862  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  19329861 atgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 36362135 - 36362025
Alignment:
Q  22 agagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgt 121  Q
    |||||||||| |||||||||||||| ||| ||||| | ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  36362135 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgt 36362036  T
Q  122 atcattactct 132  Q
    |||||||||||    
T  36362035 atcattactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 40957826 - 40957704
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||| | ||||||||||||||| |||||||||| |||||| ||||||| ||| |||||     
T  40957826 agagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaaga 40957727  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||||||||||||||||||||||    
T  40957726 gtgtctatgtatcattactcttt 40957704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 3694486 - 3694361
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||  || ||||||    
T  3694486 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagg 3694387  T
Q  112 gtgtctatgtatcattactctttttt 137  Q
    |||| ||| |||||||| || |||||    
T  3694386 gtgtgtatatatcattattcattttt 3694361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 36361904 - 36362014
Alignment:
Q  22 agagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgt 121  Q
    |||||||||| |||||||||||||| ||| ||||| | ||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  122 atcattactct 132  Q
    |||||||||||    
T  36362004 atcattactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 19436172 - 19436289
Alignment:
Q  16 aagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgt 115  Q
    ||||| |||||||||| ||||||||||| |||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||  || |||||| |||    
T  19436172 aagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgt 19436271  T
Q  116 ctatgtatcattactctt 133  Q
    ||||||||||||||||||    
T  19436272 ctatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 32951474 - 32951592
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||| ||||| |||||||| ||| ||||| ||||||  ||||||||     
T  32951474 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaaga 32951573  T
Q  112 gtgtctatgtatcattact 130  Q
    |||||||||||||||||||    
T  32951574 gtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 35522995 - 35522881
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| ||  | |||||||||||| |||||||||||| ||| |||||||| |||  |||||    
T  35522995 agagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaagg 35522896  T
Q  112 gtgtctatgtatcat 126  Q
     ||||||||||||||    
T  35522895 atgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 8238332 - 8238207
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatcta-ag 110  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| || ||||| ||||||||| ||||||||||||||||||||||||| ||| ||| ||    
T  8238332 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacag 8238233  T
Q  111 ggtgtctatgtatcattactcttttt 136  Q
    ||||| |||||||||| |||| ||||    
T  8238232 ggtgtttatgtatcataactcatttt 8238207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 36208292 - 36208171
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| ||| ||||||||||| || ||||| | || || |||||| || ||||||||||||||| |  |||||||||| ||||||    
T  36208292 agagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagg 36208193  T
Q  112 gtgtctatgtatcattactctt 133  Q
    ||||||||||||||| ||||||    
T  36208192 gtgtctatgtatcataactctt 36208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 10343544 - 10343666
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| ||||||||| | ||| |  |||||  ||  | |||||||||| |||||||||||||||   ||||||| ||| ||||||    
T  10343544 agagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagg 10343643  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||||||||||||||||||||||    
T  10343644 gtgtctatgtatcattactcttt 10343666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 35468836 - 35468962
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||||| || ||||| |||||||| |||||| || |||||||    || | | ||||| || ||||||||||||| | |||||| ||||||||||    
T  35468836 agagaagaggataggaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaagg 35468935  T
Q  112 gtgtctatgtatcattactctttttta 138  Q
     ||||||||||||||||||||||||||    
T  35468936 atgtctatgtatcattactctttttta 35468962  T

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Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 22343480 - 22343360
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||| ||    || ||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  22343480 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 22343381  T
Q  112 gtgtctatgtatcattactct 132  Q
    |||| |||||||||| |||||    
T  22343380 gtgtttatgtatcataactct 22343360  T

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Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 11044297 - 11044185
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||| ||||| ||||| ||||||| |||||||||| ||||| | ||||||||||||          |||||||||||| |||||| ||| ||||||    
T  11044297 agagaagatgagaggaaagagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagg 11044208  T
Q  112 gtgtctatgtatcattactcttt 134  Q
    |||||||||||||||||||||||    
T  11044207 gtgtctatgtatcattactcttt 11044185  T

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Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 31735996 - 31735884
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||  |  | ||||||       |||||||||||| |||| ||||||| ||| ||||||    
T  31735996 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccacctaagg 31735904  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  31735903 atgtctatgtatcataactc 31735884  T

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Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 7728025 - 7727901
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||| | ||||||| |||||||||| |||| || || || ||||||||| || ||||  ||||||  |||||||||||| ||||||    
T  7728025 agagaagagaagaagaaacagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagg 7727926  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
    |||| |||||||||| |||||||||    
T  7727925 gtgtttatgtatcataactcttttt 7727901  T

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Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 26296763 - 26296643
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||| || ||||||||||| |||| ||  | |||| ||||||| || ||||| ||| ||||||| ||||  || ||||||    
T  26296763 agagaagaggagagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaagg 26296664  T
Q  112 gtgtctatgtatcattactct 132  Q
     |||||||||||||| |||||    
T  26296663 atgtctatgtatcataactct 26296643  T

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Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 46033782 - 46033902
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||| | |||||||||||  | ||  | || |||||||||||| || ||||||||| |||||||||||| ||| |||||     
T  46033782 agagaagaggagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaaga 46033881  T
Q  112 gtgtctatgtatcattactct 132  Q
     | |||||||||||| |||||    
T  46033882 atatctatgtatcataactct 46033902  T

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Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 18207298 - 18207176
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| |||||||||||||| ||| | ||| |  | |||||| ||||| |||| ||||||||||  |||||||| ||| ||||||    
T  18207298 agagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaagg 18207200  T
Q  112 gtgtctatgtatcattactctttt 135  Q
     |||||||||||||| ||||||||    
T  18207199 ttgtctatgtatcataactctttt 18207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 32564407 - 32564526
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| |||||||  ||||||||| |||| ||| | || ||||||||| ||||||||||||||| ||||||||| ||| |||||     
T  32564407 agagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaga 32564506  T
Q  112 gtgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  32564507 atgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 41423801 - 41423682
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| ||| | ||||||| ||||||| || | || || ||||||||| ||||||  |||||||  ||||||||||||||||| |    
T  41423801 agagaagaggagatgaaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatg 41423702  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  41423701 atgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  37 tgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtctatgtatcattactc 131  Q
    |||||||||||||| ||||  |  | |||||||||||| |||||||||||| ||||||||| || ||| |||||| |||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 21234513 - 21234401
Alignment:
Q  19 aggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagggtgtcta 118  Q
    |||||||  |||| ||| |||||||||||||| | ||  |  |||||||||| ||| ||||||| |||||||||||||||||  || |||||| ||||||    
T  21234513 aggagaggtaagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtcta 21234414  T
Q  119 tgtatcattactc 131  Q
    |||||||| ||||    
T  21234413 tgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 39255905 - 39256023
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||  ||||| ||||||| |||||| ||  ||||| |  | |||||||||||| |||| ||||| ||||  |||||||| ||| ||||||    
T  39255905 agagaagaggagatgaaagagaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaagg 39256003  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  39256004 ttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 27744290 - 27744375
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgt 97  Q
    |||||||||||||| | ||| ||| ||||||| || ||||||||| |  | || ||||||||| |||||||||| |||||||||||    
T  27744290 agagaagaggagaggatagagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 16374820 - 16374893
Alignment:
Q  27 aaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtatt 100  Q
    ||||| || ||||||||||| | ||||||| | || |||||||||||| |||||||| |||||| || ||||||    
T  16374820 aaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtatt 16374893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 4148 - 4029
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||| |||||||| |    
T  4148 agagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaag 4049  T
Q  112 gtgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  4048 gtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 10090 - 10214
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||||||||| ||||||||||||| || | ||||| | ||||||||||||||| || ||||| ||||||||| |||||| ||| |||| |    
T  10090 agagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaag 10189  T
Q  112 gtgtctatgtatcattactcttttt 136  Q
    ||||||||||||||| |||||||||    
T  10190 gtgtctatgtatcataactcttttt 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 910 - 1029
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||| | |||||||||||| || |||||||| ||| |||||||||||| ||| |||| |    
T  910 agagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaag 1009  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  1010 atgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 910 - 1029
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||| | |||||||||||| || |||||||| ||| |||||||||||| ||| |||| |    
T  910 agagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaag 1009  T
Q  112 gtgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  1010 atgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 152617 - 152514
Alignment:
Q  12 agagaagaggagagaaaagaaaaagtgtgcttgtgcgggatccacataactacgtgtcagattcttgtgtgggtgtcaaagggtgtattaccatctaagg 111  Q
    ||||||||| |||  ||||| |||||||  |||||||||||||| || || || ||||||||| ||||||||||||||| ||||||||| ||| | ||||    
T  152617 agagaagagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T
Q  112 gtgt 115  Q
    ||||    
T  152517 gtgt 152514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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