View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14206_low_14 (Length: 455)
Name: NF14206_low_14
Description: NF14206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14206_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 404; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 21 - 444
Target Start/End: Original strand, 31455031 - 31455454
Alignment:
| Q |
21 |
tatacaattgcatggaagaactcttccaatctcaacaaacacaacaagcacttttacactatcaaaatgggaagctagtggaagattcattaagtggttc |
120 |
Q |
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| T |
31455031 |
tatacaattgcatggaagaactcttccaatctcaacaaacacaacaagcacttttacactatcaaaatgggaagctagtggaagattcattaagtggttc |
31455130 |
T |
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| Q |
121 |
agttacacttttagatgcatgtagttcatcaagggaattactcttgaatctcaaggaacatgtggaaacacttcaatccgctatacgtagaagacgagga |
220 |
Q |
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| T |
31455131 |
agttacacttttagatgcatgtggttcatcaagggaattactcttgaatctcaaggaacatgtggaaacacttcaatcggctatacgtagaagacgagga |
31455230 |
T |
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| Q |
221 |
aattcaacttcaagcattgaaagcagcatatatgagtatgattgctttagaaagaaggcaaagaaggaaatttctaagcaacttagtgaaatgaagaaaa |
320 |
Q |
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| T |
31455231 |
aattcaacttcaagcattgaaagcagcatatatgagtatgattgctttagaaagaaggcaaagaaggaaatttcaaagcaacttggtgaaatgaagaaaa |
31455330 |
T |
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| Q |
321 |
tggaaaacaaagtaaagcttttttctattatgggacaagatcaaaatttaatatttttggctaaggttttaagagaagctaccaccatcacaatatctat |
420 |
Q |
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| T |
31455331 |
tggaaaacaaagtaaagcttttttctattatgggccaagatcaaaatttaatatttttggctaaggttttaagagaagctaccaccatcacaatatctat |
31455430 |
T |
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| Q |
421 |
atttcgttctcttttactattcat |
444 |
Q |
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| T |
31455431 |
atttcgttctcttttactattcat |
31455454 |
T |
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