View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14206_low_57 (Length: 214)
Name: NF14206_low_57
Description: NF14206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14206_low_57 |
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Alignment Details
Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 23994636 - 23994457
Alignment:
| Q |
16 |
cagagaagaacacacacatggaacttctgcgcaacgcttattcgaattcctcagatgaagaagaagaaaaacccaaacgattgaaatcatctcacactcc |
115 |
Q |
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| T |
23994636 |
cagagaagaacacacacatggaacttctgcgcaacgcttattcaaattcctcagatgaagaagaagaa---cccaaacgactaaaatcatctcacacttc |
23994540 |
T |
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| Q |
116 |
ttcatacccaccaaaaccctatctcccttctccttctcc------cattcttccaggtagctacgtttccaaacgacaacgcg |
192 |
Q |
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| T |
23994539 |
ttcatacccaccaaaaccctatctcccttctccttctccttctctcattcttccaggtagctacgtttccaaacgacaacgcg |
23994457 |
T |
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