View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14209_high_1 (Length: 400)
Name: NF14209_high_1
Description: NF14209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14209_high_1 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 351; Significance: 0; HSPs: 38)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 16 - 386
Target Start/End: Complemental strand, 5351769 - 5351399
Alignment:
| Q |
16 |
tttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctcttgacagatggttcatcatatacgagataaactactgtct |
115 |
Q |
| |
|
||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5351769 |
tttttcttctttctgttctgattaaggtcatcagtgggctcctcttcagtagagaatctcttgacagatggttcatcatatacgagataaactactgtct |
5351670 |
T |
|
| Q |
116 |
ttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaacctctgcccctcctcatcttcaaagga |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5351669 |
ttttcacaatgcaatcattctcgaaaacaaaaatgacctccactttgttactgggttctatacttgatactaacctctgcccctcctcatcttcaaagga |
5351570 |
T |
|
| Q |
216 |
aactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgttaccaggggttgaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5351569 |
aactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgttaccaggggttgaa |
5351470 |
T |
|
| Q |
316 |
gtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaatttcacagaaga |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5351469 |
gtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaatttcacagaaga |
5351399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 2 - 371
Target Start/End: Original strand, 5100730 - 5101099
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctcttgacagatggttcatcatatacgag |
101 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5100730 |
ttcattccactcggtttttcttctttctgttctgattgaagtcatcagtgggctcctcttcagtagagaatctcttgacagatggttcatcgtatacgag |
5100829 |
T |
|
| Q |
102 |
ataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaacctctgcccctcc |
201 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| | ||||| |
|
|
| T |
5100830 |
ataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgatactaccctcagagcctcc |
5100929 |
T |
|
| Q |
202 |
tcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgt |
301 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
5100930 |
tcatcttcaaaggagactaatgcctcgctcttatagagctgaatggtggcctttgtgtaatttttcactaacacatttttaaggccacttgatgttatgt |
5101029 |
T |
|
| Q |
302 |
taccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttc |
371 |
Q |
| |
|
|| | ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
5101030 |
tatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagggacttc |
5101099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 2 - 371
Target Start/End: Original strand, 5135831 - 5136200
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctcttgacagatggttcatcatatacgag |
101 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5135831 |
ttcattccactcggtttttcttctttctgttctgattgaagtcatcattgggctcctcttcagtagagaatctcttgacagatggttcatcgtatacgag |
5135930 |
T |
|
| Q |
102 |
ataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaacctctgcccctcc |
201 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| | ||||| |
|
|
| T |
5135931 |
ataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgatactaccctcagagcctcc |
5136030 |
T |
|
| Q |
202 |
tcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgt |
301 |
Q |
| |
|
|||||||||||||| ||||||| || ||||| |||||| ||||||||||||||||||||||||| || |||| |||||||||||||||||||||| || |
|
|
| T |
5136031 |
tcatcttcaaaggaggctaatgcttcgctcttgtagagctgaatggtggcctttgtgtaattttttaccaacacatttttaaggccacttgatgttatgt |
5136130 |
T |
|
| Q |
302 |
taccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttc |
371 |
Q |
| |
|
|| | ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
5136131 |
tatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagggacttc |
5136200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 84 - 386
Target Start/End: Original strand, 5156007 - 5156309
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||| ||||| ||||||||| |||||| ||||||||| ||| | |||||||||||||| ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
5156007 |
tggttcatcgtatacaagataaactgttgtcttcttcacaatgaaattaatctcgaaaacaaaatggacctccactttgttaccaggttctagacttgat |
5156106 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| |||||||||||| |||||||||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5156107 |
actaccctctgcccctcttcatcttcaaaggaggccaatgcctcactcttataaagctgaatggtggcctttgtgtaatttttcaataacatgtttttaa |
5156206 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaatttcacaga |
383 |
Q |
| |
|
||||||| ||||||| ||| | ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5156207 |
ggccactacatgttacattatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgaggaacttcaaatttcacaga |
5156306 |
T |
|
| Q |
384 |
aga |
386 |
Q |
| |
|
||| |
|
|
| T |
5156307 |
aga |
5156309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 84 - 386
Target Start/End: Complemental strand, 5372398 - 5372096
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||| ||||||||||||| | |||||| ||||||||| |||||||||||| ||||||| || |||||||||||||| ||||||| ||||||| |
|
|
| T |
5372398 |
tggttcatcgtatacgagataaattgttgtcttcttcacaatgaaatcattctcgagaacaaaatggatctccactttgttaccaggttctagacttgat |
5372299 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| |||||||||||| |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5372298 |
actaccctctgcccctcttcatcttcaaaggagactaatgcttcactcttataaagctgaatggtggcctttgtgtaatttttcaataacatgtttttaa |
5372199 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaatttcacaga |
383 |
Q |
| |
|
||||||| |||||||| ||| | || ||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5372198 |
ggccactagatgttacattatccggagttgaagtacagacattgcacataattgtcttcaagttacgcccttccacttgaggaacttcaaatttcacaga |
5372099 |
T |
|
| Q |
384 |
aga |
386 |
Q |
| |
|
||| |
|
|
| T |
5372098 |
aga |
5372096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 84 - 370
Target Start/End: Complemental strand, 5427201 - 5426915
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| | || ||||| ||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
5427201 |
tggttcatcatatacgagataaactactgtcttcgtcacaacgaaactgttctcaaaaacaaaaacgacctccattttgttaccaggttctatacttgat |
5427102 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| || | |||||||||||||||||| || |||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
5427101 |
actactctttccccctcctcatcttcaaatgacactaatacctcactcttataaagctgaatgatggcctttgtgtaatttttcaataacatgattttaa |
5427002 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaactt |
370 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
5427001 |
ggccacttgatattacattaccaggggttgaagtatagactatgcacataattgtcttcaggttacgcccttccacttgtggaactt |
5426915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 90 - 374
Target Start/End: Complemental strand, 5398341 - 5398057
Alignment:
| Q |
90 |
atcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaac |
189 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||||| | |
|
|
| T |
5398341 |
atcatatacaagataaactgttgtcttcttcacaatgaaatcattctcgaaaacaaagacaacctcaactttgttaccaggttctatacttgatactacc |
5398242 |
T |
|
| Q |
190 |
ctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccac |
289 |
Q |
| |
|
|| |||||||| |||| ||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5398241 |
ctttgcccctcttcatgttcaaaggagaataacgcctcactcttatagagctgaatggtggcctttgtgtaatttatcactaacatgtttttaaggccac |
5398142 |
T |
|
| Q |
290 |
ttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
| |||||||| ||| | | ||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
5398141 |
tagatgttacattatccagagttgaagtatacacaatgcacatcattgtcttcaagttacgcccttccacatgaggaacttcaaa |
5398057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 89 - 374
Target Start/End: Complemental strand, 5448905 - 5448620
Alignment:
| Q |
89 |
catcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaa |
188 |
Q |
| |
|
|||||||||| ||||| ||||||||||| | |||| || |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |
|
|
| T |
5448905 |
catcatataccagatatactactgtcttctccacagtgaaatcattctcgaaaacaaaaacgatctccactttgtttccgggttctatacttgatactaa |
5448806 |
T |
|
| Q |
189 |
cctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggcca |
288 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
5448805 |
cctctgcccctccttatcttcaaaggaaactaatgtctcactcttatagatttgaatggtagcctttgtgtaatttttcaccaacacatttttaaggcca |
5448706 |
T |
|
| Q |
289 |
cttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
|| |||||||| ||| | ||||||||||||||||| |||||||||| || | |||| | |||| ||||||||||||| |||||||| |
|
|
| T |
5448705 |
ctagatgttacattatctggggttgaagtatagacaatgcacatcaatgacgtcaattgacgctcttccacttgagggacttcaaa |
5448620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 84 - 386
Target Start/End: Complemental strand, 2939216 - 2938908
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||||||||||||||||| | || ||| |||||||||||||||||||||| ||||||| ||||||||||||||||| |||| || ||||||| |
|
|
| T |
2939216 |
tggttcatcatatacgagataaattgttgccttcttcacaatgcaatcattctcgataacaaaatggacctccactttgttaccaggttatagacttgat |
2939117 |
T |
|
| Q |
184 |
actaacctctgcccctcct----catcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgttt |
279 |
Q |
| |
|
|||| ||||||||| || | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| || ||||||| |
|
|
| T |
2939116 |
actaccctctgcccttcttcatccatcttcgaaggagactaatgcctcactcttatagagctgaatggtggcctttatataatttttcaatatcatgttt |
2939017 |
T |
|
| Q |
280 |
ttaaggccacttgatgttacgttaccaggggttgaag--tatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaattt |
377 |
Q |
| |
|
||||||||||| |||||||| ||| | |||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2939016 |
ttaaggccactagatgttacattatctggggtttaagtatatagacaatgcacatcattgtcttcaagttacgcccttccacttgaggaacttcaaattt |
2938917 |
T |
|
| Q |
378 |
cacagaaga |
386 |
Q |
| |
|
||||||||| |
|
|
| T |
2938916 |
cacagaaga |
2938908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 86 - 370
Target Start/End: Complemental strand, 5098510 - 5098226
Alignment:
| Q |
86 |
gttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatac |
185 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||| || ||||||||||||||||| |||||||||||||||| |
|
|
| T |
5098510 |
gttcatcatataccagataaactgctgtctttttcacaatgaaactgttctcgaaaacaacaatgacctccactttgttaccaggttctatacttgatat |
5098411 |
T |
|
| Q |
186 |
taacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaagg |
285 |
Q |
| |
|
|| |||||| | |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5098410 |
taccctctggctctcctcatcttcaaaggagaccaatgcctcactcttatagagctgaatggtggcctttgtgtggtttttcactaacatgtttttaagg |
5098311 |
T |
|
| Q |
286 |
ccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaactt |
370 |
Q |
| |
|
||||||||| | | |||| | ||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||| ||||||| |
|
|
| T |
5098310 |
ccacttgatatcatgttagctggggttgaagtatagacaatgcacatcattgttttcaagctacggccttccacttggggaactt |
5098226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 113 - 386
Target Start/End: Complemental strand, 5334457 - 5334178
Alignment:
| Q |
113 |
tctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaacctctgcccctcctcatcttcaaa |
212 |
Q |
| |
|
|||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||||| |||||| ||||||| || |
|
|
| T |
5334457 |
tcttcttcaaaatgaaatcattctcgaaaacaaaaacgacctccactttgttaccaggttctagacatgatactaccctctacccctcttcatctttgaa |
5334358 |
T |
|
| Q |
213 |
gga-----aa--ctaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgttacc |
305 |
Q |
| |
|
| | || |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| | |
|
|
| T |
5334357 |
gaagttagaagtctaatgcctcactcttatagagttgaatggtggcctttgtgtaatttatcactaacatgtttttaaggccacttgatg-tacattatc |
5334259 |
T |
|
| Q |
306 |
aggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaatttcacagaaga |
386 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5334258 |
tggggttgaattatagaaaatgcacatcattgtcttcaagttacccccttccacttgaggaacttcaaatttcacagaaga |
5334178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 89 - 359
Target Start/End: Original strand, 5180773 - 5181043
Alignment:
| Q |
89 |
catcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaa |
188 |
Q |
| |
|
|||||||||| ||||||| | ||||||| ||||||||| || ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
5180773 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
5180872 |
T |
|
| Q |
189 |
cctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggcca |
288 |
Q |
| |
|
|||||| ||||| ||||||||||| || ||||| | ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5180873 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaatttttaactaacatgtttttaaggcca |
5180972 |
T |
|
| Q |
289 |
cttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccac |
359 |
Q |
| |
|
||||||||||| ||| || |||||| ||||||| | | ||||||||||||||||| ||| |||||||| |
|
|
| T |
5180973 |
cttgatgttacattatgtggagttgaattatagacaacgagcatcattgtcttcaagttacgtccttccac |
5181043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 89 - 370
Target Start/End: Complemental strand, 5439307 - 5439026
Alignment:
| Q |
89 |
catcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaa |
188 |
Q |
| |
|
||||||||||||||||| || |||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
5439307 |
catcatatacgagataagctgctgtctttttggcaatgaaatcattcttgaaaacaaaaacaacctccactttgttaccaggttctatacttgattttaa |
5439208 |
T |
|
| Q |
189 |
cctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggcca |
288 |
Q |
| |
|
|||||||||||||||||||||||| || |||| |||||||||||||||||| |||||||||||||||||| |||| |||| || | ||| |||||| | |
|
|
| T |
5439207 |
cctctgcccctcctcatcttcaaaagagactacagcctcactcttatagagctgaatggtggcctttgtgtgatttatcaccaatacatttataaggcta |
5439108 |
T |
|
| Q |
289 |
cttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaactt |
370 |
Q |
| |
|
|||||||| |||| | || ||||||| |||||| |||||||||| || | |||| | |||||||||||||||||| |||| |
|
|
| T |
5439107 |
tctgatgttatgttatccggagttgaagaatagacaatgcacatcaatgacatcaaattacgcccttccacttgagggactt |
5439026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 84 - 288
Target Start/End: Original strand, 5242506 - 5242710
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||||| |||||||||||| || |
|
|
| T |
5242506 |
tggttcatcatatacgagataaactactgtcttcttcacaatgaaactgttctcaaaaacaaaaacgacctccactttgttaccaggttctatacttcat |
5242605 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| ||| |||||| |||||||||||||| ||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||||| |||| || |
|
|
| T |
5242606 |
actactctcagccccttctcatcttcaaaggcggctactgcctctctcttgtagagctgaatggtggcctttgtgtaatttttcactaacaagtttccaa |
5242705 |
T |
|
| Q |
284 |
ggcca |
288 |
Q |
| |
|
||||| |
|
|
| T |
5242706 |
ggcca |
5242710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 5688897 - 5689190
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||||||||||||||||||| ||| || ||||||||| || | ||||| |||||| |||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
5688897 |
tggttcatcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacagaaacaacctccactttgttacaaggttctatacttgat |
5688996 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||| ||||||||||| |||||||| ||| |||||||||| ||||||||||| ||||| |||| |||| || |
|
|
| T |
5688997 |
actactctctgtccctcttcatcttcaaaggagactaatgcctcgctcttataaagctgaatggtggcttttgtgtaattcttcaccaacaagtttgcaa |
5689096 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgca---catcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| ||||||||| |||| | |||||| || |||| | ||||| ||||| |||||| || ||||||||||||||||| |||||||| |
|
|
| T |
5689097 |
ggccatttgatgttatgttatccagggttgtagaatagtcgatgcatatcatcaatgtctttaaagtgcgcccttccacttgagggacttcaaa |
5689190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 84 - 359
Target Start/End: Original strand, 5352857 - 5353132
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||| ||||||||| ||||||| | |||||| ||||| ||| || |||||||||||||| ||| ||||| ||||||| || || || ||||||||| |
|
|
| T |
5352857 |
tggtttatcatataccagataaattgttgtcttcttcacgatgaaacaattctcgaaaacaataaccacctctactttgtcaccaggatccatacttgat |
5352956 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||||| ||||||||||||||||| | |||| ||||||| |
|
|
| T |
5352957 |
actactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttagcaacacatttttaa |
5353056 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccac |
359 |
Q |
| |
|
||||| ||| |||| |||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
5353057 |
ggccatatgaagttatgttattttgggttgacgtatagataatgcacatcattgtcttcaagttacgcccttccac |
5353132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 84 - 374
Target Start/End: Complemental strand, 5178040 - 5177747
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||||||||||||||||||| ||| || ||||||||| || | ||||| ||||||| ||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
5178040 |
tggttcatcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctccactttgttacaaggttctatacttgat |
5177941 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||| |||||||||| |||||||| ||| |||||||||| ||||||||||| || || |||| |||| || |
|
|
| T |
5177940 |
actactctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaattcttaaccaacaagtttgcaa |
5177841 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgca---catcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| ||||||||| ||| | ||||||||| |||| | ||||| |||||||||||| || | ||||||||||||||| |||||||| |
|
|
| T |
5177840 |
ggccatttgatgttatattatccagggttgaagaatagtcaatgcatatcatcattgtctttaaagtgcacccttccacttgagggacttcaaa |
5177747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 84 - 335
Target Start/End: Complemental strand, 5279865 - 5279614
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
||||||||||||||||||||||||| ||| || ||||||||| || | ||||| ||||||| ||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
5279865 |
tggttcatcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctccactttgttacaaggttctatacttgat |
5279766 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||| |||||||||| |||||||| ||| |||||||||| ||||||||||| ||||| |||| |||| || |
|
|
| T |
5279765 |
actactctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaattcttcaccaacaagtttgcaa |
5279666 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcat |
335 |
Q |
| |
|
||||| ||||||||| ||| | ||||||||| |||| | ||||| ||||| |
|
|
| T |
5279665 |
ggccatttgatgttatattatccagggttgaagaatagtcaatgcatatcat |
5279614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 5126623 - 5126916
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||| || | |||| ||||||| ||| | ||| |||||||||| | ||||||||||||| |
|
|
| T |
5126623 |
tggttcatcatatatgagataaacagctgtcttcttcacaatgaaaccgttcttaaaaacaacaacaatctcaactttgttaccagcttctatacttgat |
5126722 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||| |||||||||||||| |||| | || ||| |
|
|
| T |
5126723 |
actactctctccccctcctcatcttcaaaggagactgctgcctctctcttatagagttgaatggtggccttcgtgtaatttttcaccaacaagcttgtaa |
5126822 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcat---tgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| |||||||| |||| | |||||||| |||||| ||||| ||||| | ||||||| |||||||| ||||||||| |||||||| |
|
|
| T |
5126823 |
ggccatctgatgttatgttatccaaggttgaagaatagacaatgcatatcattactttcttcaacgtacgccctttcacttgaggtacttcaaa |
5126916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 86 - 374
Target Start/End: Original strand, 23127306 - 23127594
Alignment:
| Q |
86 |
gttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatac |
185 |
Q |
| |
|
||||||||||||| ||||||||| ||| || ||||||| | || ||||||| ||||| | ||| ||||||| |||||||| |||||| ||||||||| |
|
|
| T |
23127306 |
gttcatcatatacaagataaactgttgtattcttcacaacgaaaccattctcaaaaacgacaacaacctccattttgttaccaggttctgcacttgatac |
23127405 |
T |
|
| Q |
186 |
taacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaagg |
285 |
Q |
| |
|
||| |||| ||| ||||||||||| || || ||||||| ||| |||||||||| | ||||||| |||||||||||||||| || |||| |||||||| | |
|
|
| T |
23127406 |
taagctcttcccttcctcatcttcgaacgagactaatgtctctctcttatagatctgaatggtaccctttgtgtaattttttaccaacacgtttttaacg |
23127505 |
T |
|
| Q |
286 |
ccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||| || || | |||| | ||||||||||||| ||| | ||||| |||||||||| || | ||||||||||||||||| ||||||| |
|
|
| T |
23127506 |
ccatccgaggtaatgttatctggggttgaagtattgacaacacacattattgtcttcacgttatgcccttccacttgaggagcttcaaa |
23127594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 377
Target Start/End: Original strand, 5072679 - 5072969
Alignment:
| Q |
87 |
ttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatact |
186 |
Q |
| |
|
|||||| |||| |||||||| || |||||||||||||||| |||| ||||| | ||||| || |||||||||| ||||| || ||||||||||||||| |
|
|
| T |
5072679 |
ttcatcgtatatgagataaattattgtctttttcacaatgaaatcgttctcaacaacaacgacaacctccacttggttaccaggctctatacttgatact |
5072778 |
T |
|
| Q |
187 |
aacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggc |
286 |
Q |
| |
|
|| |||| ||||| ||||||| ||||| ||||||||||| |||||||| || |||||||||| || |||||||||||||| | || ||||||||||| |
|
|
| T |
5072779 |
aatctctcgccctcatcatctttgaaggagactaatgcctctctcttatatagttgaatggtggctttagtgtaatttttcaccatcaagtttttaaggc |
5072878 |
T |
|
| Q |
287 |
cacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaattt |
377 |
Q |
| |
|
| |||| ||| ||| || | ||||| |||||| | ||| |||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
5072879 |
cgtctgatactacattatttggtggtgaagaatagacaacgcatatcattgtcttcaatatgcgcccttccacttgagggacttcaaattt |
5072969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 87 - 374
Target Start/End: Complemental strand, 5346327 - 5346037
Alignment:
| Q |
87 |
ttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatact |
186 |
Q |
| |
|
||||||||||| |||||||| | ||||||| ||||||||| || ||||||| | ||||| || |||||||||||||||| ||||||||||||||||| |
|
|
| T |
5346327 |
ttcatcatatatgagataaattgctgtcttcttcacaatgaaaccattctcaataacaacgacaacctccactttgttaccaggttctatacttgataca |
5346228 |
T |
|
| Q |
187 |
aacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggc |
286 |
Q |
| |
|
| ||||| ||||||||||||||||||| ||| |||||| ||||| || ||| ||||||| |||||||||||||||||||| |||| |||| | |||| |
|
|
| T |
5346227 |
actctctggccctcctcatcttcaaaggcggctactgcctctctcttgtatagctgaatggtagcctttgtgtaatttttcaccaacaagtttctcaggc |
5346128 |
T |
|
| Q |
287 |
cacttgatgttacgttaccaggggttgaagtatagactatgcacatc---attgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
|| ||||||| ||| | | ||||||| |||||| | || ||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5346127 |
catcagatgttatattatccgaagttgaagaatagacaacacatatcgttattgtcttcaacattcgcccttccacttgaggaacttcaaa |
5346037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 5065443 - 5065736
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||||| |||||||||| |||| | ||||||| | || | ||||| ||||||| ||| | |||||||| || | ||||| ||||||||| |
|
|
| T |
5065443 |
tggttcatcatatatgagataaactgttgtcctcttcacaacgaaaccgttctcaaaaacaacaacaaaatccactttatttccaggttcaatacttgat |
5065542 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| |||||||||||||| || |||| ||| | | |
|
|
| T |
5065543 |
actactctctgcccctcctcatcttcaaaggagattaacgcctctctcttatagagctgaatggtggattttgtgtaattttttaccaacaaatttgtga |
5065642 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgca---catcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| |||| || |||| | |||||||||| |||||| ||||| ||| ||||||||||| |||||||| || |||||| |||||||| |
|
|
| T |
5065643 |
ggccatcagatgctatgttatccggggttgaagaatagacaatgcatatcattattgtcttcaacatacgccctttcatttgagggacttcaaa |
5065736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 374
Target Start/End: Original strand, 5283223 - 5283496
Alignment:
| Q |
89 |
catcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaa |
188 |
Q |
| |
|
|||||||||| ||||||| | ||||||| ||||||||| || || || |||||||| | ||||||||||||||||| ||||| |||||||||| || |
|
|
| T |
5283223 |
catcatataccagataaattgctgtcttcttcacaatgaaactgttttcaaaaacaaatatgacctccactttgttacctggttcgatacttgatattac |
5283322 |
T |
|
| Q |
189 |
cctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggcca |
288 |
Q |
| |
|
|||||||| ||| || ||||||| | ||||| ||||| |||||||| | ||||||||||||||||||||||||||||||| |||| ||| || | |
|
|
| T |
5283323 |
cctctgccactc---attttcaaagtaggaaaatgcatcactattatagagttggatggtggcctttgtgtaatttttcactaacacgtttctaaagcta |
5283419 |
T |
|
| Q |
289 |
cttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||| |||||||| || |||||| |||||||| || ||||| |
|
|
| T |
5283420 |
-----tgtt----taccaggggttgaagtatagacaatgcacatcattgacttcaagttacacccttcaacttgagggacatcaaa |
5283496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 5256113 - 5256226
Alignment:
| Q |
89 |
catcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaa |
188 |
Q |
| |
|
|||||||||| | ||||| | ||||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||| || |
|
|
| T |
5256113 |
catcatataccaaataaattgctgtcttcttcacaatgaaatcattcttgaaaacaaatacgacctccactttgttacctggttcaatacttgatattac |
5256212 |
T |
|
| Q |
189 |
cctctgcccctcct |
202 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
5256213 |
cctctgccactcct |
5256226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5439437 - 5439361
Alignment:
| Q |
1 |
tttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctctt |
77 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
5439437 |
tttcattccattcgatttttcttctttctgttccgattgaagtcatcagtgggctcctctccagtagagaatctctt |
5439361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 5398459 - 5398379
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctcttgacag |
82 |
Q |
| |
|
||||||||| ||| ||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||| |
|
|
| T |
5398459 |
ttcattcaactcggcttttcttctttcttttctgattgaagtcatcagtgggctcatcttcagtagagaatctcttgacag |
5398379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5352699 - 5352780
Alignment:
| Q |
1 |
tttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctcttgacag |
82 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| || ||| || |||||||||| |||||||||||||||||| |
|
|
| T |
5352699 |
tttcattccattcgatttttcttctttctgttctgattgacatcttcagtgtgctcctcttcaatagagaatctcttgacag |
5352780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 269
Target Start/End: Original strand, 5124492 - 5124622
Alignment:
| Q |
139 |
aaaacaaaaacgacctccactttgttactgggttctatacttgatactaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttataga |
238 |
Q |
| |
|
||||||||||| | |||||||| |||| ||||||||||| |||||||| || ||||||||||| |||| ||| | |||||||| || |||||||||| |
|
|
| T |
5124492 |
aaaacaaaaacaaattccactttattaccaggttctatactcgatactaatctatgcccctcctcctcttgaaatgcgactaatgcatctctcttataga |
5124591 |
T |
|
| Q |
239 |
gccgaatggtggcctttgtgtaatttttcac |
269 |
Q |
| |
|
| ||||||| |||| |||||||||||||| |
|
|
| T |
5124592 |
gttgaatggtccccttcgtgtaatttttcac |
5124622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 5255984 - 5256050
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtaga |
68 |
Q |
| |
|
||||||| | ||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |
|
|
| T |
5255984 |
ttcattccactcggtttttcttctttctgttctgattgaaatcatcagtgggctcctcttcagtaga |
5256050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 5242360 - 5242438
Alignment:
| Q |
12 |
tcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctcttgacagatggttcatc |
92 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5242360 |
tcgatttttctt--ttccgttctgattgaagtcatcagcaggctcctcttcagtagagaatctcttgacagagcgttcatc |
5242438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 5256365 - 5256434
Alignment:
| Q |
305 |
caggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| | |||||| ||||||||| |||| || |||||||| |
|
|
| T |
5256365 |
caggggttgaagtatagacaatgcacatcattgacatcaagttacgcccttcaacttcggggacttcaaa |
5256434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 5449022 - 5448989
Alignment:
| Q |
14 |
gatttttcttctttctgttctgattgaagtcatc |
47 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
5449022 |
gatttttcttctttctgttctgattgaagtcatc |
5448989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 5180644 - 5180686
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtc |
44 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||||||||||| |
|
|
| T |
5180644 |
ttcattccactcggtttttcttctttctgttctgattgaagtc |
5180686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 5256253 - 5256295
Alignment:
| Q |
232 |
ttatagagccgaatggtggcctttgtgtaatttttcactaaca |
274 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
5256253 |
ttatagagttggatggtggcctttgtgtaatttttcactaaca |
5256295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 5155866 - 5155931
Alignment:
| Q |
18 |
tttcttctttctgttctgattgaagtcatcactggactcctcttcagtagagaatctcttgacaga |
83 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||| ||| |||||| || |||||||||||||| |
|
|
| T |
5155866 |
tttcttctttctgttttgattgcagtcatcaatgggatccccttcagaagctaatctcttgacaga |
5155931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 5334498 - 5334453
Alignment:
| Q |
17 |
ttttcttctttctgttctgattgaagtcatcactggactcctcttc |
62 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||| ||| ||||| |
|
|
| T |
5334498 |
ttttcttctttctgttctcattgaagtcatcagtgggctcatcttc |
5334453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 5283109 - 5283153
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcat |
46 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
5283109 |
ttcattccactcggtttttcttctttctgttctgagtgaagtcat |
5283153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 374
Target Start/End: Original strand, 47985393 - 47985677
Alignment:
| Q |
90 |
atcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaac |
189 |
Q |
| |
|
||||||||| ||||||||| || || | ||||||||| || ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
47985393 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
47985492 |
T |
|
| Q |
190 |
ctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccac |
289 |
Q |
| |
|
|||| ||||||||||||| ||||||| | ||||| ||||||||||||||| ||||| |||| |||||| |||| ||||||||| ||||||||||||| |
|
|
| T |
47985493 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
47985592 |
T |
|
| Q |
290 |
ttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
|||||||| || | | | ||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||| |||||||| |
|
|
| T |
47985593 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
47985677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 374
Target Start/End: Original strand, 48003967 - 48004251
Alignment:
| Q |
90 |
atcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaac |
189 |
Q |
| |
|
||||||||| ||||||||| || || | ||||||||| || ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
48003967 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
48004066 |
T |
|
| Q |
190 |
ctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccac |
289 |
Q |
| |
|
|||| ||||||||||||| ||||||| | ||||| ||||||||||||||| ||||| |||| |||||| |||| ||||||||| ||||||||||||| |
|
|
| T |
48004067 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
48004166 |
T |
|
| Q |
290 |
ttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
|||||||| || | | | ||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||| |||||||| |
|
|
| T |
48004167 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
48004251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 90 - 374
Target Start/End: Original strand, 47994680 - 47994964
Alignment:
| Q |
90 |
atcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaac |
189 |
Q |
| |
|
||||||||| ||||||||| || || | ||||||||| || ||||||| ||||||| ||| |||||||||||||||| || ||||||||||||||||| |
|
|
| T |
47994680 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
47994779 |
T |
|
| Q |
190 |
ctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccac |
289 |
Q |
| |
|
|||| ||||||||||||| ||||||| | ||||| ||||||||||||||| ||||| |||| |||||| |||| ||||||||| ||||||||||||| |
|
|
| T |
47994780 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
47994879 |
T |
|
| Q |
290 |
ttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
|||||||| || | | | ||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||| |||||||| |
|
|
| T |
47994880 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
47994964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 90 - 374
Target Start/End: Original strand, 48013252 - 48013536
Alignment:
| Q |
90 |
atcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgatactaac |
189 |
Q |
| |
|
||||||||| ||||||||| || || | ||||||||| || ||||||| ||||||| ||| |||||||||||||||| || ||||||||||||||||| |
|
|
| T |
48013252 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
48013351 |
T |
|
| Q |
190 |
ctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccac |
289 |
Q |
| |
|
|||| ||||||||||||| ||||||| | ||||| ||||||||||||||| ||||| |||| |||||| |||| ||||||||| ||||||||||||| |
|
|
| T |
48013352 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
48013451 |
T |
|
| Q |
290 |
ttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
|||||||| || | | | ||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||| |||||||| |
|
|
| T |
48013452 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
48013536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 47985230 - 47985298
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagaga |
70 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
47985230 |
ttcattccactcgttttttcttctttctagtctgattgaagtcatcgatggactcctcttcagtagaga |
47985298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 47994517 - 47994585
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagaga |
70 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
47994517 |
ttcattccactcgttttttcttctttctagtctgattgaagtcatcgatggactcctcttcagtagaga |
47994585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 48003804 - 48003872
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagaga |
70 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48003804 |
ttcattccactcgttttttcttctttctagtctgattgaagtcatcgatggactcctcttcagtagaga |
48003872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 48013089 - 48013157
Alignment:
| Q |
2 |
ttcattcaattcgatttttcttctttctgttctgattgaagtcatcactggactcctcttcagtagaga |
70 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48013089 |
ttcattccactcgttttttcttctttctagtctgattgaagtcatcgatggactcctcttcagtagaga |
48013157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 36212915 - 36213205
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||| | |||||||| ||||||| ||||||||| ||| ||||| ||||||| ||| ||||||| ||| | || ||||||||||||||| |
|
|
| T |
36212915 |
tggttcatcataaatgagataaatcgctgtcttcttcacaatgaaattgttctcaaaaacaacaacaacctccattttatcaccaggttctatacttgat |
36213014 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||||||||||| |||||||||| | ||||||| |||||||||| |||||| || | || |||||||| |
|
|
| T |
36213015 |
actaatctctgcccctcctcatcttcaaatgagactaatgcctctctcttatagatctgaatggtagcctttgtgtgattttttaccatcacgtttttaa |
36213114 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
| ||| ||||| || ||| | || ||||||| |||||| || ||||| |||||||| |||| ||| || |||||| |||| || ||||| |
|
|
| T |
36213115 |
gtccatctgatgctatgttttctggagttgaagaatagacaatacacattattgtctttaagttacgtccatccactcgagggacatcaaa |
36213205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 18936623 - 18936471
Alignment:
| Q |
219 |
taatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgttaccaggggttgaagta |
318 |
Q |
| |
|
|||||| || |||||||||||| |||||||| ||||||| ||||| |||| |||| ||||||||| |||||||| | |||||| | |||| | |
|
|
| T |
18936623 |
taatgcgtctctcttatagagctgaatggtgttctttgtgcaatttatcaccaacaaaactttaaggccttctgatgttatatcaccaggagaagaagaa |
18936524 |
T |
|
| Q |
319 |
tagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttc |
371 |
Q |
| |
|
||||| | |||||| || || |||||| |||||| |||||||| |||||||| |
|
|
| T |
18936523 |
tagacaacgcacatgatggttttcaagctacgcccatccacttgtggaacttc |
18936471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 4319296 - 4319586
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| |||||||| || ||| | ||||| | ||| | |||||| |||| || ||||| ||| ||| | |
|
|
| T |
4319296 |
tggttcatcatatatgagataaactgctgtcttcatcacaatgaaactgttcccaaaaacgacaacaatctccaccttgtcaccaggttccatatttgtt |
4319395 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|| | ||||||| |||||||| ||||||||| |||||| || ||||||||||| ||||||||| |||||||| |||| ||||||||| |||| || |
|
|
| T |
4319396 |
acaactctctgccactcctcattttcaaaggaggataatgcttctctcttatagagttgaatggtggtctttgtgtgatttatcactaacacattttcaa |
4319495 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| |||||||| || ||| |||||| |||||| |||||||| |||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
4319496 |
ggccatctgatgttatgtcgtatgggcttgaagaatagacaatgcacattattgtcttcaagctacgtccttccacttgagggacttcaaa |
4319586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 25569086 - 25568956
Alignment:
| Q |
139 |
aaaacaaaaacgacctccactttgttactgggttctatacttgatactaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttataga |
238 |
Q |
| |
|
||||||||||| |||||||||||||| | ||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||| ||||| |||| |
|
|
| T |
25569086 |
aaaacaaaaacaacctccactttgtttccaggttctatacttgatactactatatgcccctcctcgttttcaaaggaaactaatgcctctctcttgtaga |
25568987 |
T |
|
| Q |
239 |
gccgaatggtggcctttgtgtaatttttcac |
269 |
Q |
| |
|
| ||||||||| ||| |||||||||||||| |
|
|
| T |
25568986 |
cctgaatggtggacttggtgtaatttttcac |
25568956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 384
Target Start/End: Complemental strand, 4337118 - 4336903
Alignment:
| Q |
169 |
ggttctatacttgatactaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttca |
268 |
Q |
| |
|
||||| ||| ||||||| | ||||||| |||||||| ||| ||||| ||||||||| |||||| |||| ||||||||| |||||||| |||| ||| |
|
|
| T |
4337118 |
ggttccatatttgataccactctctgccactcctcattttcgaaggacgataatgcctctctcttaaagagttgaatggtggtctttgtgtgatttatca |
4337019 |
T |
|
| Q |
269 |
ctaacatgtttttaaggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaac |
368 |
Q |
| |
|
| |||| |||| ||||||| |||||||| || | ||| |||||| |||||| ||||||||||||||||||||| ||| |||||||| ||||| || |
|
|
| T |
4337018 |
ccaacacattttgaaggccatctgatgttatgtcatttgggcttgaagaatagacaatgcacatcattgtcttcaagctacgtccttccacatgagggac |
4336919 |
T |
|
| Q |
369 |
ttcaaatttcacagaa |
384 |
Q |
| |
|
|||||| || |||||| |
|
|
| T |
4336918 |
ttcaaaatttacagaa |
4336903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 4122638 - 4122928
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| |||||||| || || | ||||||| ||| | ||||||||||| || ||||| ||| ||||| |
|
|
| T |
4122638 |
tggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactttgtcaccaggttccatatttgat |
4122737 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|| | |||| || ||||||| ||| ||||| ||| ||||| ||||||||||| ||||||||| |||||||| |||| |||| |||| |||| || |
|
|
| T |
4122738 |
accactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaa |
4122837 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| ||||| || | | ||| |||| | |||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
4122838 |
ggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaa |
4122928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 374
Target Start/End: Complemental strand, 4362853 - 4362563
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| |||||||| || ||| | | |||| ||| | ||||||||||| || ||||| ||| ||||| |
|
|
| T |
4362853 |
tggttcatcatatatgagataaactgctgtcttcgtcacaatgacattgttcaccattacaataactatctccactttgtcaccaggttccatatttgat |
4362754 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
| | ||||||| ||| ||| ||| ||||| ||| ||||| ||||||||||| ||||||||| |||||||| |||| |||| |||| ||| ||| |
|
|
| T |
4362753 |
atcactctctgccagtccgcattttcgaaggacgataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacatttctaa |
4362654 |
T |
|
| Q |
284 |
ggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| |||||||| || | ||| |||||| |||||| |||||||| |||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
4362653 |
ggccatctgatgttatgtcatatgggcttgaagaatagacaatgcacattattgtcttcaagctacatccttccacttgagggacttcaaa |
4362563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 288
Target Start/End: Original strand, 4132612 - 4132813
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| |||||||| || ||| | ||||||| || ||| ||||||| || ||||| ||| ||||| |
|
|
| T |
4132612 |
tggttcatcatatatgagataaactgctgtcttcatcacaatgaaactgttcccaaaaacaacaat---ctcgactttgtcaccaggttccatatttgat |
4132708 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
|||| ||||||| |||||||| ||||||||| | |||||||| |||||||||||| ||||||| | ||| |||| |||| |||| |||| ||||| | |
|
|
| T |
4132709 |
actactctctgccactcctcattttcaaaggaggcgaatgcctctctcttatagagctgaatggtagtcttcgtgtgatttatcaccaacacatttttta |
4132808 |
T |
|
| Q |
284 |
ggcca |
288 |
Q |
| |
|
||||| |
|
|
| T |
4132809 |
ggcca |
4132813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 374
Target Start/End: Complemental strand, 4346664 - 4346367
Alignment:
| Q |
84 |
tggttcatcatatacgagataaactactgtctttttcacaatgcaatcattctcgaaaacaaaaacgacctccactttgttactgggttctatacttgat |
183 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| |||||||| || ||| | | ||||| ||| | ||||||||||| || ||||| ||| | ||| |
|
|
| T |
4346664 |
tggttcatcatatatgagataaactgctgtcttcgtcacaatgacattgttcaccataacaacaactatctccactttgtcaccaggttccatattcgat |
4346565 |
T |
|
| Q |
184 |
actaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaa |
283 |
Q |
| |
|
| | ||||||| ||||| ||||||||| ||| ||||| ||||||||||| ||||||||| |||||||| |||| |||| |||| ||||||| |
|
|
| T |
4346564 |
atcattctctgccagtcctccctttcaaaggacgataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacatttttaa |
4346465 |
T |
|
| Q |
284 |
ggcca-ct------tgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| || |||||||| || | | ||| |||||| |||||| |||||||| |||||||||||| | | |||||||||||||| |||||||| |
|
|
| T |
4346464 |
ggccatctgatgtctgatgttatgtcatctgggcttgaagaatagacaatgcacattattgtcttcaagctatgtccttccacttgagggacttcaaa |
4346367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 25568894 - 25568845
Alignment:
| Q |
325 |
atgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
374 |
Q |
| |
|
||||| |||||||| |||||| |||||||||||||| |||| |||||||| |
|
|
| T |
25568894 |
atgcaaatcattgttttcaagacacgcccttccactcgaggtacttcaaa |
25568845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 139 - 284
Target Start/End: Original strand, 7926 - 8071
Alignment:
| Q |
139 |
aaaacaaaaacgacctccactttgttactgggttctatacttgatactaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttataga |
238 |
Q |
| |
|
||||||| ||| |||||||||||||| | |||||||| |||||||||||| ||||| |||||||| | ||||||| |||||| ||||||||||||| |
|
|
| T |
7926 |
aaaacaacaacaacctccactttgtttccgggttctacacttgatactaaattctgcttttcctcatccttaaaggaagctaatgtttcactcttataga |
8025 |
T |
|
| Q |
239 |
gccgaatggtggcctttgtgtaatttttcactaacatgtttttaag |
284 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8026 |
tctgaatggtggcctttgtgtaatttttcactaacacatttttaag |
8071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 8879607 - 8879544
Alignment:
| Q |
307 |
ggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaactt |
370 |
Q |
| |
|
|||||||| |||||||| ||||||||||| | |||||||| | |||||| ||||||||||||| |
|
|
| T |
8879607 |
ggggttgatgtatagacaatgcacatcatcgacttcaagtttctcccttcaacttgaggaactt |
8879544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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