View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1420_high_11 (Length: 450)

Name: NF1420_high_11
Description: NF1420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1420_high_11
NF1420_high_11
[»] chr3 (36 HSPs)
chr3 (2-283)||(54635224-54635505)
chr3 (2-283)||(6716599-6716881)
chr3 (2-272)||(45283086-45283356)
chr3 (2-261)||(3617550-3617813)
chr3 (2-261)||(25637527-25637793)
chr3 (2-256)||(7779821-7780072)
chr3 (2-261)||(4600549-4600812)
chr3 (2-253)||(801192-801435)
chr3 (2-261)||(4598328-4598591)
chr3 (2-261)||(10211495-10211758)
chr3 (23-256)||(23199957-23200185)
chr3 (2-261)||(10209275-10209538)
chr3 (2-261)||(10056319-10056582)
chr3 (2-261)||(10058541-10058804)
chr3 (2-261)||(10060763-10061026)
chr3 (2-261)||(10062985-10063248)
chr3 (2-261)||(10065207-10065470)
chr3 (39-261)||(10067443-10067669)
chr3 (23-186)||(23197824-23197986)
chr3 (23-186)||(19683774-19683936)
chr3 (2-186)||(9636010-9636194)
chr3 (23-186)||(9581403-9581565)
chr3 (2-236)||(5257983-5258212)
chr3 (24-186)||(7764586-7764747)
chr3 (2-236)||(5260162-5260391)
chr3 (23-74)||(45095284-45095335)
chr3 (23-186)||(7762386-7762548)
chr3 (23-182)||(37408579-37408737)
chr3 (24-81)||(43401790-43401847)
chr3 (24-78)||(43403736-43403790)
chr3 (24-81)||(49199458-49199515)
chr3 (23-74)||(34491333-34491383)
chr3 (144-186)||(9634707-9634750)
chr3 (144-186)||(29811107-29811150)
chr3 (23-81)||(40913414-40913471)
chr3 (144-184)||(51399053-51399094)
[»] chr6 (37 HSPs)
chr6 (2-283)||(27647960-27648232)
chr6 (284-442)||(11423309-11423467)
chr6 (2-261)||(16578327-16578586)
chr6 (2-261)||(16616794-16617053)
chr6 (2-261)||(16653212-16653471)
chr6 (2-261)||(16554969-16555228)
chr6 (2-261)||(16631525-16631784)
chr6 (2-261)||(25421406-25421669)
chr6 (2-261)||(6027347-6027609)
chr6 (2-261)||(34167180-34167443)
chr6 (2-261)||(13154015-13154278)
chr6 (23-253)||(3072580-3072806)
chr6 (2-261)||(33341908-33342173)
chr6 (2-241)||(6097281-6097519)
chr6 (2-261)||(34164958-34165221)
chr6 (2-256)||(412202-412437)
chr6 (284-430)||(11437843-11437992)
chr6 (2-236)||(2171366-2171600)
chr6 (322-434)||(11430492-11430604)
chr6 (156-261)||(6136108-6136216)
chr6 (2-186)||(16452214-16452397)
chr6 (2-253)||(30834357-30834604)
chr6 (23-186)||(5408956-5409116)
chr6 (23-186)||(5413281-5413441)
chr6 (23-186)||(31404561-31404722)
chr6 (195-261)||(13159066-13159134)
chr6 (23-74)||(5406196-5406247)
chr6 (23-74)||(5410521-5410572)
chr6 (23-79)||(3808699-3808755)
chr6 (23-169)||(33160254-33160399)
chr6 (2-70)||(17763090-17763158)
chr6 (144-186)||(9182917-9182960)
chr6 (218-261)||(16552976-16553019)
chr6 (218-261)||(16629532-16629575)
chr6 (23-70)||(17758144-17758191)
chr6 (23-70)||(21589052-21589098)
chr6 (23-70)||(21593785-21593831)
[»] chr8 (25 HSPs)
chr8 (2-283)||(25690054-25690335)
chr8 (2-283)||(3439603-3439886)
chr8 (2-261)||(15290624-15290887)
chr8 (2-261)||(15470993-15471256)
chr8 (2-261)||(42575130-42575392)
chr8 (2-256)||(2627836-2628087)
chr8 (2-236)||(31218357-31218586)
chr8 (23-186)||(42498315-42498477)
chr8 (23-186)||(34254217-34254378)
chr8 (23-186)||(34256393-34256554)
chr8 (2-235)||(19945199-19945427)
chr8 (2-186)||(17982753-17982935)
chr8 (2-186)||(44303955-44304137)
chr8 (2-73)||(1746216-1746287)
chr8 (23-164)||(12702542-12702681)
chr8 (205-253)||(43036720-43036767)
chr8 (144-186)||(1746105-1746148)
chr8 (23-70)||(4283645-4283691)
chr8 (205-252)||(4734004-4734051)
chr8 (144-186)||(30143579-30143622)
chr8 (124-163)||(32902096-32902135)
chr8 (23-70)||(42434992-42435038)
chr8 (205-253)||(3303494-3303541)
chr8 (124-182)||(4731876-4731936)
chr8 (2-70)||(18655500-18655567)
[»] chr5 (29 HSPs)
chr5 (2-283)||(29720464-29720743)
chr5 (2-283)||(29722624-29722903)
chr5 (2-260)||(29750969-29751228)
chr5 (20-261)||(22536103-22536340)
chr5 (2-261)||(25078221-25078484)
chr5 (2-261)||(25136190-25136453)
chr5 (2-261)||(10593358-10593621)
chr5 (2-261)||(40380191-40380454)
chr5 (2-261)||(40382402-40382665)
chr5 (2-256)||(9789042-9789292)
chr5 (2-256)||(18441462-18441716)
chr5 (2-253)||(16409575-16409824)
chr5 (2-261)||(16544509-16544774)
chr5 (2-261)||(16546731-16546996)
chr5 (2-256)||(26177982-26178234)
chr5 (2-256)||(26170862-26171114)
chr5 (2-236)||(30182688-30182917)
chr5 (2-236)||(13343160-13343389)
chr5 (2-256)||(36073863-36074111)
chr5 (23-169)||(13239872-13240016)
chr5 (23-186)||(25412881-25413042)
chr5 (23-74)||(37439262-37439313)
chr5 (23-70)||(213586-213633)
chr5 (23-70)||(5058166-5058212)
chr5 (23-81)||(28278437-28278493)
chr5 (23-169)||(32636945-32637088)
chr5 (144-186)||(30682809-30682852)
chr5 (23-70)||(40147382-40147428)
chr5 (107-182)||(39468439-39468516)
[»] chr1 (24 HSPs)
chr1 (2-283)||(9987301-9987579)
chr1 (2-284)||(21054058-21054336)
chr1 (2-236)||(40282477-40282711)
chr1 (2-236)||(20622072-20622305)
chr1 (20-283)||(9036534-9036799)
chr1 (2-261)||(44203732-44203995)
chr1 (2-256)||(51765497-51765747)
chr1 (23-186)||(8550670-8550834)
chr1 (2-186)||(13316238-13316420)
chr1 (23-188)||(20762793-20762952)
chr1 (23-164)||(3189451-3189590)
chr1 (23-164)||(3198268-3198407)
chr1 (23-164)||(3207107-3207246)
chr1 (290-434)||(44907188-44907332)
chr1 (23-81)||(42297964-42298022)
chr1 (40-186)||(3157003-3157147)
chr1 (23-83)||(29136368-29136427)
chr1 (124-182)||(44455378-44455438)
chr1 (23-70)||(13547090-13547136)
chr1 (23-70)||(13549001-13549047)
chr1 (23-70)||(31925708-31925754)
chr1 (23-70)||(37168419-37168465)
chr1 (40-186)||(37559751-37559897)
chr1 (147-186)||(10925464-10925504)
[»] chr7 (28 HSPs)
chr7 (2-272)||(20343997-20344266)
chr7 (2-261)||(18388565-18388828)
chr7 (2-261)||(18392001-18392264)
chr7 (2-261)||(6594363-6594626)
chr7 (2-261)||(6592145-6592408)
chr7 (2-261)||(1560470-1560734)
chr7 (2-261)||(32060127-32060390)
chr7 (23-253)||(43503975-43504201)
chr7 (2-186)||(39731469-39731653)
chr7 (131-241)||(24790230-24790338)
chr7 (2-119)||(24789941-24790059)
chr7 (2-182)||(35854014-35854194)
chr7 (2-253)||(25766780-25767028)
chr7 (24-253)||(48408926-48409152)
chr7 (2-186)||(25615953-25616137)
chr7 (23-186)||(23555161-23555323)
chr7 (23-253)||(4178894-4179118)
chr7 (23-74)||(29991174-29991225)
chr7 (23-74)||(34310712-34310763)
chr7 (23-169)||(19502299-19502443)
chr7 (23-90)||(2390403-2390469)
chr7 (23-81)||(22270094-22270150)
chr7 (23-182)||(27347938-27348095)
chr7 (124-186)||(43864462-43864526)
chr7 (23-184)||(48489552-48489711)
chr7 (23-70)||(32358055-32358101)
chr7 (124-186)||(18126864-18126928)
chr7 (124-160)||(36574434-36574470)
[»] scaffold0565 (1 HSPs)
scaffold0565 (2-261)||(2409-2672)
[»] chr2 (18 HSPs)
chr2 (2-236)||(6266791-6267023)
chr2 (2-261)||(12647191-12647454)
chr2 (2-261)||(13655834-13656100)
chr2 (23-256)||(32289685-32289916)
chr2 (2-253)||(4484151-4484398)
chr2 (2-253)||(30833446-30833693)
chr2 (2-186)||(4503019-4503201)
chr2 (23-186)||(36987961-36988123)
chr2 (23-186)||(6594890-6595053)
chr2 (2-186)||(45099854-45100036)
chr2 (23-74)||(5723252-5723303)
chr2 (23-186)||(36205551-36205712)
chr2 (23-74)||(2334414-2334465)
chr2 (144-186)||(17057255-17057298)
chr2 (144-186)||(17085238-17085281)
chr2 (23-70)||(45727050-45727096)
chr2 (26-70)||(35446885-35446928)
chr2 (124-186)||(38312458-38312522)
[»] chr4 (18 HSPs)
chr4 (2-261)||(8395703-8395967)
chr4 (2-261)||(8393494-8393758)
chr4 (2-261)||(7125002-7125265)
chr4 (2-261)||(7122783-7123046)
chr4 (23-236)||(31495143-31495363)
chr4 (2-261)||(5136165-5136429)
chr4 (2-261)||(5138390-5138654)
chr4 (2-253)||(13992114-13992361)
chr4 (23-186)||(5369968-5370130)
chr4 (23-186)||(56178522-56178684)
chr4 (23-186)||(48143164-48143330)
chr4 (24-81)||(2209836-2209893)
chr4 (23-70)||(29999806-29999853)
chr4 (23-81)||(50262690-50262748)
chr4 (23-186)||(52095248-52095409)
chr4 (26-186)||(52082549-52082708)
chr4 (124-161)||(29056573-29056610)
chr4 (23-67)||(41964537-41964580)
[»] scaffold0674 (1 HSPs)
scaffold0674 (2-237)||(3557-3794)
[»] scaffold0137 (1 HSPs)
scaffold0137 (2-261)||(6373-6638)
[»] scaffold1808 (1 HSPs)
scaffold1808 (39-237)||(2-202)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-256)||(10979-11230)
scaffold0491 (1-256)||(8553-8804)
[»] scaffold0286 (1 HSPs)
scaffold0286 (2-236)||(11657-11895)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-236)||(434633-434863)
[»] scaffold1519 (1 HSPs)
scaffold1519 (2-186)||(1015-1198)
[»] scaffold0176 (1 HSPs)
scaffold0176 (23-70)||(18004-18051)
[»] scaffold0016 (1 HSPs)
scaffold0016 (23-253)||(114723-114949)
[»] scaffold0066 (1 HSPs)
scaffold0066 (23-186)||(20301-20462)
[»] scaffold0466 (1 HSPs)
scaffold0466 (23-70)||(7448-7494)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 54635224 - 54635505
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54635224 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccc 54635323  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgt 200  Q
    || ||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54635324 tctccttttatcttgtgattgt-gtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcacacacactttgt 54635422  T
Q  201 ttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatcaaggagatcggaattcacaaca 283  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  |||||| ||| ||||||||| |||||||    
T  54635423 ttggtggttaccactctcctttgctccacacatcattatttagtattggtgtgactcgatctaggcgatcggaatccacaaca 54635505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 6716599 - 6716881
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6716599 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccc 6716698  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgtttt-gttgattattgcttgaacacacactttg 199  Q
    |||||||||||||||||||  |  ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  6716699 tccccttttatcttgtgattgtatttttgagtttcacacttgtttcctagattagatctaggtggtgttttggttgattattgcttgcacacacactttg 6716798  T
Q  200 tttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatcaaggagatcggaattcacaaca 283  Q
    ||||||||||||| || ||| ||||||||||||||| || |||| ||||||||||||||||| ||| |||||||||||||||||    
T  6716799 tttggtggttaccgctttccgttgctccacacatcactc-tttgcattggtgtggttcgatctaggtgatcggaattcacaaca 6716881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 45283086 - 45283356
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45283086 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctcttggtgcttttgttttcttcttccct 45283185  T
Q  102 cccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttg 199  Q
    | ||||  ||||||||||||  | || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  45283186 ctccttgtttatcttgtgattgt-gtattgtgtttctcactagtttcctagattagatctaggtggtgttttgttgattattgcttgcacaaacactttg 45283284  T
Q  200 tttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatcaaggagatcgg 272  Q
    ||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  45283285 tttggtggttaccgctctccgtcgctccacacatcattc-tttgtattggtgtggttcgatctaggcgatcgg 45283356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 3617550 - 3617813
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  3617550 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 3617649  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  3617650 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 3617749  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  3617750 ttcggtggttaccactctccgtcgctccacacatcattcttatttgtattggtgtggttcgatc 3617813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 25637527 - 25637793
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  25637527 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgcttttgttttcttcttccc 25637626  T
Q  101 tcccct--tttatcttgtga-tccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    || |||  |||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||  |||||| || | |||||    
T  25637627 tctccttgtttatcttgtgattgtttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcctgcttgcacaatacact 25637726  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  25637727 ttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 25637793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 256
Target Start/End: Complemental strand, 7780072 - 7779821
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||| || |||||||||||||||||||||  ||||||||| ||||||||    
T  7780072 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccaaagtgggtgaacaatctcttggtgtctttgttttcctcttccct 7779973  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttct-cacttgtttcctagattagatctaggtggtgtttt-gttgattattgcttgaacacacactttg 199  Q
    | |||||||||||||| |  | || |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||  |||||||||||    
T  7779972 ctccttttatcttgtgcttgt-gtattgtgttttttcacttgtttcctagattagatctaggtgctgtttttgttgattattgcttg--cacacactttg 7779876  T
Q  200 tttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    || |||||||||||||||||||||||||||||||| ||  || ||||||||||||||    
T  7779875 tt-ggtggttaccactctcctttgctccacacatc-ttacttcgtattggtgtggtt 7779821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 4600812 - 4600549
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  4600812 ttgatagtggattggagagtacaaactctcctctagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 4600713  T
Q  101 tcccct--tttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactt 197  Q
    || |||  |||||||||||||  ||| ||  |||||| ||||||||||||||||| ||||||||||||||||||||| || | |||||  | | |  |||    
T  4600712 tctccttgtttatcttgtgattgttgatt--tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttctggcttgctcaataagctt 4600615  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  4600614 tgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 4600549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 801192 - 801435
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  801192 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccct 801291  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtg--gtgttttgttgattattgcttgaacacacactttg 199  Q
    | ||||||||||||||     | || ||| |||| ||||||||||||||||||||||||||||  || |||||||||||||||||||  ||||||||||     
T  801292 ctccttttatcttgtg-----tattgtgtttttc-cacttgtttcctagattagatctaggtgctgttttttgttgattattgcttg--cacacacttt- 801382  T
Q  200 tttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
     || |||||||| ||| ||||||||||||||||||| | ||| |||||||||||    
T  801383 attagtggttactactttcctttgctccacacatca-tatttcgtattggtgtg 801435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 4598591 - 4598328
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  4598591 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 4598492  T
Q  101 tcccct--tttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactt 197  Q
    || |||  |||||||||||||  ||| ||  |||||| ||||||||||||||||| ||||||||||||||||| ||| || |||||||  | | |  |||    
T  4598491 tctccttgtttatcttgtgattgttgctt--tgtttcacacttgtttcctagattggatctaggtggtgttttattgtttcttgcttgctcaataagctt 4598394  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  4598393 tgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 4598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10211495 - 10211758
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || |||||||| |||||||    
T  10211495 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcatcttccc 10211594  T
Q  101 tcccct--tttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactt 197  Q
    || |||  |||||||||||||  ||| ||  |||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||  | | |  |||    
T  10211595 tctccttgtttatcttgtgattgttgctt--tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctt 10211692  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||||| | ||||||||||||||| |  | ||||||||||||||||||||    
T  10211693 tgattggtggttaccactctccgtcgctccacacatcattattctctgtattggtgtggttcgatc 10211758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 23 - 256
Target Start/End: Complemental strand, 23200185 - 23199957
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||   || ||    
T  23200185 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcttcttccctctccttttatctt---atgct 23200090  T
Q  123 tgt--tttgtgtttctca-cttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtttggtggttaccactctcc 219  Q
    |||  ||||||||| |||  ||||||||||||||||||||||||| | | |||||||||||||||||  ||| ||||||| ||  ||||||| ||| |||    
T  23200089 tgtggtttgtgtttttcattttgtttcctagattagatctaggtgttttattgttgattattgcttg--cactcactttg-ttattggttactactttcc 23199993  T
Q  220 tttgctccacacatcattcttttgtattggtgtggtt 256  Q
    ||||||||||| ||||| | |||||||||||||||||    
T  23199992 tttgctccacatatcatac-tttgtattggtgtggtt 23199957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10209275 - 10209538
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || |||||||||||||||||| |||||||||| ||||||||| ||| || |||||||| |||||||    
T  10209275 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccaaactgggtgaccaatctctttgtgtttattgttttcatcttccc 10209374  T
Q  101 tcccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactt 197  Q
    || ||||  ||||||||||||  ||| |||||  ||| ||||||||||||||||| ||||||||||||||||||||| || |||||||  | | |  |||    
T  10209375 tctccttgtttatcttgtgattgttgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctt 10209472  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||||| |  |||||||||||||| |  | ||||||||||||||||||||    
T  10209473 tgattggtggttaccactctccgtcactccacacatcattattctctgtattggtgtggttcgatc 10209538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10056319 - 10056582
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  10056319 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 10056418  T
Q  101 tcccct--tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    || |||  ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||| ||||||| || |||||||  | | |  ||    
T  10056419 tctccttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagct 10056515  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    | ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  10056516 tggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10056582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10058541 - 10058804
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  10058541 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 10058640  T
Q  101 tcccct--tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    || |||  ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||| ||||||| || |||||||  | | |  ||    
T  10058641 tctccttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagct 10058737  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    | ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  10058738 tggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10058804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10060763 - 10061026
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  10060763 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 10060862  T
Q  101 tcccct--tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    || |||  ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||| ||||||| || |||||||  | | |  ||    
T  10060863 tctccttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagct 10060959  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    | ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  10060960 tggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10061026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10062985 - 10063248
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  10062985 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 10063084  T
Q  101 tcccct--tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    || |||  ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||| ||||||| || |||||||  | | |  ||    
T  10063085 tctccttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagct 10063181  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    | ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  10063182 tggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10063248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10065207 - 10065470
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  10065207 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 10065306  T
Q  101 tcccct--tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    || |||  ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||| ||||||| || |||||||  | | |  ||    
T  10065307 tctccttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagct 10065403  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    | ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  10065404 tggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10065470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 39 - 261
Target Start/End: Original strand, 10067443 - 10067669
Alignment:
Q  39 gtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccctcccct--tttatcttgtgatccttgtt-ttgtgttt 134  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||| |||  ||||||||||| |  | |||  | |||||    
T  10067443 gtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtt--tagttgctttgttt 10067540  T
Q  135 ctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttgtttggtggttaccactctcctttgctccacacat 233  Q
    | ||||||||||||||||| ||||||||||||| ||||||| || |||||||  | | |  ||| ||||||||||||||||||||| | |||||||||||    
T  10067541 cacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacat 10067639  T
Q  234 cattct--tttgtattggtgtggttcgatc 261  Q
    |||| |  ||||||||||||||||||||||    
T  10067640 cattattctttgtattggtgtggttcgatc 10067669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 23197986 - 23197824
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||||| ||| ||||||||||||||   ||    
T  23197986 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttctctctccttttatcttgtg---ct 23197891  T
Q  123 tgt--tttgtgtttctca-cttgtttcctagattagatctaggtggtgttttgttgattattgcttg 186  Q
    |||  ||||||||| |||  ||||||||||||||||||||| ||| | | |||||||||||||||||    
T  23197890 tgtggtttgtgtttttcattttgtttcctagattagatctatgtgttttattgttgattattgcttg 23197824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 19683936 - 19683774
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  19683936 caatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 19683840  T
Q  123 tgttttgtgtttctcacttgt-ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     ||||||||||| |||||| | ||||||||||||||||||||| |||| |||||||||||||||||    
T  19683839 ggttttgtgtttttcacttttattcctagattagatctaggtgctgttattgttgattattgcttg 19683774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 9636194 - 9636010
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||  |||||||   ||| | ||    
T  9636194 ttgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaactgggtgaacaatctcttggtgtgtttgtttctctctgctct 9636095  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||||||||||||||   |||||  ||| || || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  9636094 -cccttttatcttgtg---cttgtgatttatgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 9636010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 9581403 - 9581565
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||| ||  |||||||   ||||| |||||  ||||| ||||| |  |    
T  9581403 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctcttctctccc--tttattttgtgcttgt 9581499  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||||||| || |||| ||| ||| ||||||||||||||||| |||| |||||||||||||||||    
T  9581500 ggttttgtgcttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttg 9581565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 5258212 - 5257983
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||| ||| || ||||||||||||||||||||||| |||||||||||| ||||||  |||||||   ||||  ||    
T  5258212 ttgatagtggattggagagttcaatctcttctccagagtaggtcaagtttggaccgaacttggtgaacaatct-ttggtgtgtttgtttctctctt--ct 5258116  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    | |||||||| || ||   |||||  |||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||  ||  |||||    
T  5258115 ctccttttatattttg---cttgtggtttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg--cattcactt 5258021  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcat 236  Q
    || ||  ||||||| ||| ||||||||||||||||||||    
T  5258020 tg-ttattggttactactttcctttgctccacacatcat 5257983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 7764586 - 7764747
Alignment:
Q  24 aatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcctt 123  Q
    ||||||||||| || ||||||||| ||| |||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |     
T  7764586 aatctctcctccagagtaggtcaaatttagaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgtttgtg 7764682  T
Q  124 gttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||||||| || |||| ||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  7764683 gttttgtgcttttcactttgattccaagattagatctaggtgctgttattgttgattattgcttg 7764747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 5260391 - 5260162
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||| ||| |  ||||||||||||||||||||||| |||||||||||| ||||||  |||||||   ||||| ||    
T  5260391 ttgatagtggattggagagttcaatctcttctccaaagtaggtcaagtttggaccgaacttggtgaacaatct-ttggtgtgtttgtttctctcttctct 5260293  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    ||  |||||| || ||   |||||  |||||| || |||||| | |||||| |||||||||||||| |||| |||||||||||||||||  ||| |||||    
T  5260292 cc--ttttatattttg---cttgtggtttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttg--cactcactt 5260200  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcat 236  Q
    ||||   ||||||| ||| ||||||||||||||||||||    
T  5260199 tgttat-tggttactactttcctttgctccacacatcat 5260162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 45095284 - 45095335
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45095284 caatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct 45095335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 7762386 - 7762548
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||  || ||  |||||||   ||||  ||| ||||||||||| || |  |    
T  7762386 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-atgatgtgtttgtttctctctt--ctctccttttatcttttgcttgt 7762482  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||||||| || |||| ||| |||||| |||||||||||||| |||| |||||||||||| ||||    
T  7762483 ggttttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattacttg 7762548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 37408579 - 37408737
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  37408579 caatctctcctccagagtaggtcaagtttggatcgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 37408675  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattg 182  Q
      ||| ||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||    
T  37408676 gatttagtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattg 37408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 43401847 - 43401790
Alignment:
Q  24 aatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||    
T  43401847 aatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtg 43401790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 43403790 - 43403736
Alignment:
Q  24 aatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttg 78  Q
    ||||||||||| || |||||||| | |||||||||||||||||||||||||||||    
T  43403790 aatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttg 43403736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 49199515 - 49199458
Alignment:
Q  24 aatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    ||||||||||| ||  ||||||| | ||||||||||||||||||||||||||||||||    
T  49199515 aatctctcctccagactaggtcatggttggaccgaactgggtgaacaatctcttggtg 49199458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 34491333 - 34491383
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  34491333 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaacaatct 34491383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 9634750 - 9634707
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  9634750 ttcctagattagatctaggtgctgttattgttgattattgcttg 9634707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 29811107 - 29811150
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  29811107 ttcctagattagatctaggtgctgttattgttgattattgcttg 29811150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 40913414 - 40913471
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    |||||||||| | ||  ||||||||||| |||||||||||||| |||||||||||||||    
T  40913414 caatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctcttggtg 40913471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 51399053 - 51399094
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgct 184  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  51399053 ttcctagattagatctaggtgctgttattgttgattattgct 51399094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 27647960 - 27648232
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| |||||| |||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647960 ttgatagtggattggagagtacaaactctcctccagagtagatcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 27648059  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtt 201  Q
    | ||||||||||||||       | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27648060 ctccttttatcttgtg-------tattgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcacacacactttgtt 27648152  T
Q  202 tggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatcaaggagatcggaattcacaaca 283  Q
     ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||    
T  27648153 cggtggttaccactctcctttgctccacacatcattc--ttgtattggtgtggttcgatctaggtgatcggaattcacaaca 27648232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 284 - 442
Target Start/End: Complemental strand, 11423467 - 11423309
Alignment:
Q  284 cacttgtagaaagccttgatgactcctttagaacttctcttgatgcttatgatgaagcttcttctttcattgaaatgaatccaaaaatgccaccttctaa 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11423467 cacttgtagaaagccttgatgactcctttagaacttctcttgatgcttatgatgaagcttcttctttcattgaaatgaatccaaaaatgccaccttctaa 11423368  T
Q  384 aagattctttataaactcacaagatttcaaatttcattttccaacctcacattcttctc 442  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11423367 aagattctttataaactcacaagattttaaatttcattttccaacctcacattcttctc 11423309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 16578586 - 16578327
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  16578586 ttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccc 16578487  T
Q  101 tcccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacacttt 198  Q
    || ||||  ||||||||||||  | | |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||    
T  16578486 tctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttg--cacacacttt 16578390  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  16578389 gtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatc 16578327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 16616794 - 16617053
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  16616794 ttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccc 16616893  T
Q  101 tcccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacacttt 198  Q
    || ||||  ||||||||||||  | | |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||    
T  16616894 tctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttg--cacacacttt 16616990  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  16616991 gtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatc 16617053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 16653212 - 16653471
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  16653212 ttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccc 16653311  T
Q  101 tcccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacacttt 198  Q
    || ||||  ||||||||||||  | | |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||    
T  16653312 tctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttg--cacacacttt 16653408  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  16653409 gtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatc 16653471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 16554969 - 16555228
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||| |||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  16554969 ttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccc 16555068  T
Q  101 tcccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacacttt 198  Q
    || ||||  ||||||||||||  | | |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||    
T  16555069 tctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttg--cacacacttt 16555165  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  16555166 gtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatc 16555228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 16631525 - 16631784
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||| |||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  16631525 ttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccc 16631624  T
Q  101 tcccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacacttt 198  Q
    || ||||  ||||||||||||  | | |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||    
T  16631625 tctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttg--cacacacttt 16631721  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  16631722 gtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatc 16631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 25421406 - 25421669
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  25421406 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 25421505  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  25421506 tccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 25421605  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  25421606 ttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 25421669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 6027347 - 6027609
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  6027347 ttgatagtggattggagagtacaatctctcctccagagtatgtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 6027446  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||  ||||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | |||| |||    
T  6027447 tcca-ttttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacaccttg 6027545  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || |||||||||| |||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  6027546 ttaggtggttacccctctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 6027609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 34167180 - 34167443
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  34167180 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 34167279  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| || |||||||  | | |   ||||    
T  34167280 tctccttgtatcttgtgattgttgctttgtgtttcacacttggttcctagatttgatctaggtggtgttttgttgttttttgcttgctcaatattttttg 34167379  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  34167380 tttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 34167443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 13154015 - 13154278
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  13154015 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 13154114  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| |||||| |||||||||| |||||||||||||| |||||| || |||||||  | | |  |||||    
T  13154115 tctccttgtatcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttg 13154214  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  13154215 ttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 13154278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 253
Target Start/End: Complemental strand, 3072806 - 3072580
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| |       
T  3072806 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatcttgtgct-tg 3072708  T
Q  123 tgttttgtgtttctcacttgtttcctagattagatctaggtggt-gttttgttgattattgcttgaacacacactttgtttggtggttaccactctcctt 221  Q
    |||||| || || ||||||||||||||||||||||||| ||| |  |||||||||||||||||||  ||||||||||| || |||||||| ||| |||||    
T  3072707 tgttttatgcttttcacttgtttcctagattagatctatgtgctatttttgttgattattgcttg--cacacactttg-ttagtggttactactttcctt 3072611  T
Q  222 tgctccacacatcattcttttgtattggtgtg 253  Q
    |||||||||||||| | ||| |||||||||||    
T  3072610 tgctccacacatca-tatttcgtattggtgtg 3072580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 33342173 - 33341908
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  33342173 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 33342074  T
Q  101 tccccttt---tatcttgtgatcc-ttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacac 195  Q
    || |||||   ||||||||| |   ||| |||||  ||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | |  |    
T  33342073 tctcctttgtttatcttgtgtttagttgctttgt--ttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataagc 33341976  T
Q  196 tttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  33341975 tttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 33341908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 6097519 - 6097281
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  6097519 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccc 6097420  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttct-cacttgtttcctagattagatctaggtggtg-ttttgttgattattgcttgaacacacacttt 198  Q
    || |||| |||||||||||   ||| |||||||| | |||||||| ||||||||||||| ||||| || ||||||||||||| |||||  ||||||||||    
T  6097419 tctccttgtatcttgtgat-tgtgtattgtgtttttccacttgttacctagattagatcaaggtgctgtttttgttgattatagcttg--cacacacttt 6097323  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttt 241  Q
    | || |||||||| ||| ||| |||||||||||||||||||||    
T  6097322 g-ttagtggttactactttccgttgctccacacatcattcttt 6097281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 34164958 - 34165221
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  34164958 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 34165057  T
Q  101 tcccct--tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    || |||  ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||| ||||||| || |||||||  | | |  ||    
T  34165058 tctccttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagct 34165154  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    | ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  34165155 tggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 34165221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 2 - 256
Target Start/End: Original strand, 412202 - 412437
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| |||||| |||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  412202 ttgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccc 412301  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgt 200  Q
    || |||||||||||||| |  | || |||||||| ||||||||| ||||||||||||||||||| ||||                   ||||||||||||    
T  412302 tctccttttatcttgtgcttgt-gtattgtgtttttcacttgttacctagattagatctaggtgctgttg------------------cacacactttgt 412382  T
Q  201 ttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    ||||||||||| ||| |||||||||||||||||||| | || ||||||||||||||    
T  412383 ttggtggttactactttcctttgctccacacatcatac-ttggtattggtgtggtt 412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 284 - 430
Target Start/End: Complemental strand, 11437992 - 11437843
Alignment:
Q  284 cacttgtagaaagccttgatg---actcctttagaacttctcttgatgcttatgatgaagcttcttctttcattgaaatgaatccaaaaatgccaccttc 380  Q
    |||| ||||||||||||||||     ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| |||||| ||||||| ||||    
T  11437992 cactagtagaaagccttgatggttcttcctttagaacttatcttgatgcttctgatgaagcttcttccttcattgaaatggatccaagaatgccatcttc 11437893  T
Q  381 taaaagattctttataaactcacaagatttcaaatttcattttccaacct 430  Q
     | |||||||||||||||||||||||||||||||||| ||||||||||||    
T  11437892 aagaagattctttataaactcacaagatttcaaatttgattttccaacct 11437843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 2171600 - 2171366
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||| ||    
T  2171600 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtttatctcttctct 2171501  T
Q  102 ccccttttatcttgtgatccttgttttgtg---tttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacact 196  Q
     ||||||||||||||| |   |||||| ||   ||| |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||  ||||||||    
T  2171500 -cccttttatcttgtgct-tgtgttttatgttttttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg--cacacact 2171405  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcat 236  Q
    ||| || |||||||| ||| ||||||||||||||||||||    
T  2171404 ttg-ttagtggttactactttcctttgctccacacatcat 2171366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 322 - 434
Target Start/End: Complemental strand, 11430604 - 11430492
Alignment:
Q  322 cttgatgcttatgatgaagcttcttctttcattgaaatgaatccaaaaatgccaccttctaaaagattctttataaactcacaagatttcaaatttcatt 421  Q
    ||||||| | ||||||||| |||||| |||||||||||| |||||| |||||||||||||| |||||| || ||||||||||||||||| |||||| |||    
T  11430604 cttgatgatgatgatgaaggttcttccttcattgaaatggatccaagaatgccaccttctagaagatttttcataaactcacaagatttaaaatttgatt 11430505  T
Q  422 ttccaacctcaca 434  Q
    ||||||| |||||    
T  11430504 ttccaacttcaca 11430492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 6136216 - 6136108
Alignment:
Q  156 atctaggtggtgttttgttgattattgcttgaacac-acactttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgt 252  Q
    |||||||||||||||||||| || ||||||| |||  |||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |    
T  6136216 atctaggtggtgttttgttgtttcttgcttgcacaatacactttgtttggtggttaccactctccgttgctccacacatcattattctttgtattggtat 6136117  T
Q  253 ggttcgatc 261  Q
    |||||||||    
T  6136116 ggttcgatc 6136108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 16452397 - 16452214
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||    
T  16452397 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ct 16452301  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    | |||||||| || |  | |||||  |||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  16452300 ctccttttatatttt--tgcttgtggtttgtgcttttcactttgattcctagattagatctaggtgatgttattgttgattattgcttg 16452214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 30834604 - 30834357
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||| ||||| ||||||  |||||||   ||||  ||    
T  30834604 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatct-ttggtgtgtttgtttatctctt--ct 30834508  T
Q  102 ccccttttatcttgtgatccttgttt-tgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacacttt 198  Q
    | |||||||| || || |  | |||| ||| ||| |||| ||| ||| ||||||||||||||||| |||| |||||||||||||||||  ||  ||||||    
T  30834507 ctccttttatattttgcttgtggtttgtgtttttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttg--cattcacttt 30834410  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
    | ||  ||||||| | | ||||||||||||||||||| | ||| |||||||||||    
T  30834409 g-ttattggttactattttcctttgctccacacatca-tatttcgtattggtgtg 30834357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 5409116 - 5408956
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| ||   ||    
T  5409116 caatctctcctccagagtaggtcaagtttggaccgaact-ggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttg---ct 5409024  T
Q  123 tgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||  |||||| || || | ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  5409023 tgtggtttgtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttg 5408956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 5413441 - 5413281
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| ||   ||    
T  5413441 caatctctcctccagagtaggtcaagtttggaccgaact-ggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttg---ct 5413349  T
Q  123 tgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||  |||||| || || | ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  5413348 tgtggtttgtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttg 5413281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 31404722 - 31404561
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| ||   ||    
T  31404722 caatctctcctccagagtaggccaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttg---ct 31404629  T
Q  123 tgt--tttgtg-tttctcacttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||  |||||| ||||    ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  31404628 tgtggtttgtgctttcctctttgattcctagattagatctaggtgctgttattgttgattattgcttg 31404561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 13159066 - 13159134
Alignment:
Q  195 ctttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  13159066 ctttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 13159134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 5406247 - 5406196
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    |||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  5406247 caatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatct 5406196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 5410572 - 5410521
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    |||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  5410572 caatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatct 5410521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 3808755 - 3808699
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttgg 79  Q
    |||||||||||| || |||||||| | |||||||||||| |||||||||||||||||    
T  3808755 caatctctcctccagagtaggtcatgattggaccgaactaggtgaacaatctcttgg 3808699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 33160399 - 33160254
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||  ||||||||||||| ||||||||||||||||| ||||||  |||||||   ||||| || || ||||||||| || |  |    
T  33160399 caatctctcctccagagtatttcaagtttggaccaaactgggtgaacaatct-ttggtgtgtttgtttctctcttctct-cctttttatcttttgtttgt 33160302  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt 169  Q
     |||||||| || |||| ||| || |||||||||||||||||| ||||    
T  33160301 ggttttgtgcttttcactttgattactagattagatctaggtgttgtt 33160254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 17763090 - 17763158
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||| ||||||  |||||  |||||||||||| || |||| |||||||||||||||||| ||||||||    
T  17763090 ttgatagtggattggagtgatcaatctctcctccagagtagatcaagtttggaccgaactaggtgaaca 17763158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 9182960 - 9182917
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  9182960 ttcctagattagatctaggtgttgttattgttgattattgcttg 9182917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 16552976 - 16553019
Alignment:
Q  218 cctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    |||| ||||||||||||||| ||| |||||||||||||||||||    
T  16552976 ccttggctccacacatcattatttagtattggtgtggttcgatc 16553019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 16629532 - 16629575
Alignment:
Q  218 cctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    |||| ||||||||||||||| ||| |||||||||||||||||||    
T  16629532 ccttggctccacacatcattatttagtattggtgtggttcgatc 16629575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 17758144 - 17758191
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||||| ||||||| |||| |||||||||||||||||| ||||||||    
T  17758144 caatctcccctctagagtagttcaagtttggaccgaactaggtgaaca 17758191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 21589052 - 21589098
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  21589052 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 21589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 21593785 - 21593831
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  21593785 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 21593831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 184; Significance: 2e-99; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 25690054 - 25690335
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgctt-ttgttttcttcttcc 99  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  25690054 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtttgttgttttcttcttcc 25690153  T
Q  100 ctccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttg 199  Q
    |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  25690154 ctccccttttatcttgtga-gtgtgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattcttgcttgcacacacactttg 25690252  T
Q  200 tttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatcaaggagatcggaattcacaaca 283  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| |||| ||||||||||    
T  25690253 tttggtggttaccactctcctttgctccacacatcattc-tttgtattggtgtggttcgatcttggaggtcgggattcacaaca 25690335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 3439603 - 3439886
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  3439603 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactggatgaacaatctctttggtgcttttgttttcttcttccc 3439702  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgt 200  Q
    || ||||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  3439703 tctccttttatcttgtgattgt-gttttgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattgttgcttg--cacacactttgt 3439799  T
Q  201 ttggtggttaccactctcctttgctccacacatcattctttt-gtattggtgtggttcgatcaa---ggagatcggaattcacaaca 283  Q
    |||||||||||| |||||| | ||||||||||||||| |||| ||||||||||||||||||| |   || |||||||||||||||||    
T  3439800 ttggtggttaccgctctccgtcgctccacacatcatttttttagtattggtgtggttcgatctaagtggtgatcggaattcacaaca 3439886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 15290624 - 15290887
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||  ||||||||| ||| || ||||||||||||||||    
T  15290624 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccc 15290723  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| |||||| |||||||||| |||||||||||||| |||||| || |||||||  | | |  |||||    
T  15290724 tctccttgtatcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttg 15290823  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  15290824 ttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 15290887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 15470993 - 15471256
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||  ||||||||| ||| || ||||||||||||||||    
T  15470993 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccc 15471092  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| |||||| |||||||||| |||||||||||||| |||||| || |||||||  | | |  |||||    
T  15471093 tctccttgtatcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttg 15471192  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  15471193 ttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 15471256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 42575392 - 42575130
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  42575392 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 42575293  T
Q  101 tccccttttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacacttt 198  Q
    || |||| ||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||  | | |  ||||    
T  42575292 tctccttgtatcttgtgtt--tggttgctttgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagcttt 42575195  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  42575194 gtttggtggttaccactctccgtcgctccacacatcattatagtttgtattggtgtggttcgatc 42575130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 256
Target Start/End: Original strand, 2627836 - 2628087
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||    
T  2627836 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatctcttggtgtctttgttttcctcttccct 2627935  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgtt-ttgttga-ttattgcttgaacacacactttg 199  Q
    | |||||||||||||| |   |||||| || || ||||||||||||||||||||||||||||| |||| ||||||| || |||||||  ||| |||||||    
T  2627936 ctccttttatcttgtgct-tgtgttttatgcttttcacttgtttcctagattagatctaggtgttgttattgttgattttttgcttg--cacccactttg 2628032  T
Q  200 tttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
     || |||||||| ||| |||||||||||||||||| ||  |||||||||||||||||    
T  2628033 -ttagtggttactactttcctttgctccacacatc-ttactttgtattggtgtggtt 2628087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 31218357 - 31218586
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| |||||| |||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||    
T  31218357 ttgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ct 31218453  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttg 199  Q
    | |||||||||||||| |   ||||||||| || |||| ||||||||||||||||||||||||| |||| |||||||||||||||||  ||  |||||||    
T  31218454 ctccttttatcttgtgct-tatgttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttg--cattcactttg 31218550  T
Q  200 tttggtggttaccactctcctttgctccacacatcat 236  Q
     ||  ||||| | ||| ||||||||||||||||||||    
T  31218551 -ttattggttgctactttcctttgctccacacatcat 31218586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 42498315 - 42498477
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||| | ||||  ||| ||||||||||| || |  |    
T  42498315 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttccctctt--ctctccttttatcttttgcttgt 42498411  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     ||||||||||| |||| ||| ||||||||||||||||||||| |||| ||||| |||||||||||    
T  42498412 ggttttgtgtttttcactttgattcctagattagatctaggtgttgttattgttaattattgcttg 42498477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 34254378 - 34254217
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| ||   ||    
T  34254378 caatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttg---ct 34254285  T
Q  123 tgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||  |||||| || || | ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  34254284 tgtggtttgtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttg 34254217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 34256554 - 34256393
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| ||   ||    
T  34256554 caatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttg---ct 34256461  T
Q  123 tgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||  |||||| || || | ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  34256460 tgtggtttgtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttg 34256393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 19945427 - 19945199
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||  |||||||   ||||  ||    
T  19945427 ttgatagtggattggagagttcaatctctcctcgagagtaggtcaagtttgaaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ct 19945331  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    | |||||||| || ||   |||||  |||||| || |||||| | ||||||||||||||||||||| |||| |||||||||||||||||  ||  |||||    
T  19945330 ctccttttatattttg---cttgtggtttgtgcttttcacttcgattcctagattagatctaggtgctgttattgttgattattgcttg--cattcactt 19945236  T
Q  198 tgtttggtggttaccactctcctttgctccacacatca 235  Q
    || ||  ||||||| ||| |||||||||||||||||||    
T  19945235 tg-ttattggttactactttcctttgctccacacatca 19945199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 17982753 - 17982935
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||    
T  17982753 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ct 17982849  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    | |||||||| || ||   |||||  |||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  17982850 ctccttttatattttg---cttgtggtttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 17982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 44303955 - 44304137
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||| |||||| |||||||||||| ||||||  |||||||   ||||  ||    
T  44303955 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggatcgaactaggtgaacaatct-ttggtgtgtttgtttctctctt--ct 44304051  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    | ||||||||||| ||   |||||  |||||| || |||| ||| || |||||||||||||||||| |||| |||||||||||||||||    
T  44304052 ctccttttatcttttg---cttgtggtttgtgcttttcactttgatttctagattagatctaggtgttgttattgttgattattgcttg 44304137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 1746287 - 1746216
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatc 73  Q
    ||||| ||||||  ||| || |||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  1746287 ttgatagtggattggagagttcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatc 1746216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 12702681 - 12702542
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||| ||||  ||||||||||| |||||||||||||| |||||||| |||||   |||||||   ||||| |||||  ||||||||||| |  |    
T  12702681 caatctctcccctagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtatgtttgtttctctcttctctccc--tttatcttgtgcttgt 12702586  T
Q  123 tgttttgtgtttctcactt--gtttcctagattagatctaggtg 164  Q
     ||||||||||| ||||||   ||| ||||||||||||||||||    
T  12702585 ggttttgtgtttttcactttgattttctagattagatctaggtg 12702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 43036720 - 43036767
Alignment:
Q  205 tggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  43036720 tggttactactttcctttgctccacacatcatt-ttttgtattggtgtg 43036767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 1746148 - 1746105
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  1746148 ttcctagattagatctaggtgctgttattgttgattattgcttg 1746105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 4283645 - 4283691
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  4283645 caatctcccctctagagtaggtcaagtt-ggaccgaactgggtgaaca 4283691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 4734004 - 4734051
Alignment:
Q  205 tggttaccactctcctttgctccacacatcattcttttgtattggtgt 252  Q
    ||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  4734004 tggttactactttcctttgctccacacatcattggtttgtattggtgt 4734051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 30143579 - 30143622
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  30143579 ttcctagattagatctaggtgttgttattgttgattattgcttg 30143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 32902135 - 32902096
Alignment:
Q  124 gttttgtgtttctcacttgtttcctagattagatctaggt 163  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  32902135 gttttgtgtttttcacttggttcctagattagatctaggt 32902096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 42435038 - 42434992
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  42435038 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 42434992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 3303541 - 3303494
Alignment:
Q  205 tggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
    ||||||||||| ||||||||||||||||||| |  ||||||||||||||    
T  3303541 tggttaccactttcctttgctccacacatca-tagtttgtattggtgtg 3303494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 4731876 - 4731936
Alignment:
Q  124 gttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattg 182  Q
    |||||||| || |||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  4731876 gttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattg 4731936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 18655500 - 18655567
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||| |||||| |||| |  |||||||||||| |  |||||||||||| |||||||||||||||||||    
T  18655500 ttgatagtggattagagagatcaatctctcctccaaagtaggtcaagtt-ggaccgaactgggtgaaca 18655567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 2e-99; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 29720464 - 29720743
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  29720464 ttgatagtggattggagagtacaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccct 29720563  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtt 201  Q
    | ||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29720564 ctccttttatcttgtgattgt-gtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgtacacacactttgtt 29720662  T
Q  202 tggtggttaccactctcctttgctccacacatcat-tcttttgtattggtgtggttcgatcaaggagatcggaattcacaaca 283  Q
    ||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||     |||||||||||||||||||    
T  29720663 tggtggttaccactctcctttgctccacacaacatatttcttgtattggtgtggttcga--cttgagatcggaattcacaaca 29720743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 29722624 - 29722903
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  29722624 ttgatagtggattggagagtacaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccct 29722723  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtt 201  Q
    | ||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29722724 ctccttttatcttgtgattgt-gtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgtacacacactttgtt 29722822  T
Q  202 tggtggttaccactctcctttgctccacacatcat-tcttttgtattggtgtggttcgatcaaggagatcggaattcacaaca 283  Q
    |||||||||||||||| |||||||||||||| ||| | | |||||||||||||||||||     |||||||||||||||||||    
T  29722823 tggtggttaccactctactttgctccacacaccatatttcttgtattggtgtggttcga--cttgagatcggaattcacaaca 29722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 2 - 260
Target Start/End: Complemental strand, 29751228 - 29750969
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg-cttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29751228 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccc 29751129  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgt 200  Q
    || ||||||||||||||||  | ||  |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  29751128 tctccttttatcttgtgattgt-gtactgtgtttctcacttgttttctagattatatctaggtggtgttttgttgattattgcttgcacacacacattgt 29751030  T
Q  201 ttggtggttaccactctcctttgctccacacatcat-tcttttgtattggtgtggttcgat 260  Q
    |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  29751029 ttggtggttaccactctcctttgctccacacatcatatttcttgtattggtgtggttcgat 29750969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 22536340 - 22536103
Alignment:
Q  20 gtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgat 119  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22536340 gtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgat 22536241  T
Q  120 ccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttg-tttggtggttaccactctc 218  Q
       ||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| |||||||  || |||||||| ||||||||||||| |||||    
T  22536240 -tgtgttttgagtttctcacttgtttcctagattagatctaggt-gttttttgttgattgttgcttg--catacactttgctttggtggttaccgctctc 22536145  T
Q  219 ctttgctccacacatcattcttttgtattggtgtggttcgatc 261  Q
    | | |||||||||||||||| ||||||||||||||||||||||    
T  22536144 cgtcgctccacacatcattc-tttgtattggtgtggttcgatc 22536103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 25078221 - 25078484
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  25078221 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 25078320  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  25078321 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 25078420  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  25078421 ttcggtggttaccactctccgtcgctccacacatcattcttctttgtattggtgtggttcgatc 25078484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 25136190 - 25136453
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  25136190 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 25136289  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  25136290 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 25136389  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  25136390 ttcggtggttaccactctccgtcgctccacacatcattcttctttgtattggtgtggttcgatc 25136453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 10593358 - 10593621
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  10593358 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttctacttccct 10593457  T
Q  102 cccct--tttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacacttt 198  Q
    | |||  |||||||||||||   || |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | |||||||    
T  10593458 ctccttgtttatcttgtgat-tgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacacttt 10593556  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  10593557 gtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10593621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 40380191 - 40380454
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  40380191 ttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 40380290  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  40380291 tccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 40380390  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  40380391 tttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 40380454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 40382402 - 40382665
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  40382402 ttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 40382501  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  40382502 tccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 40382601  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||   ||||||||||||||| |  ||||||||||||||||||||||    
T  40382602 tttggtggttaccactctccgccgctccacacatcattattctttgtattggtgtggttcgatc 40382665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 256
Target Start/End: Complemental strand, 9789292 - 9789042
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  9789292 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccc 9789193  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgt 200  Q
    || || ||||||||||| |   ||| |||||||| |||||| |||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||     
T  9789192 tctccgtttatcttgtgct-tgtgtattgtgtttttcacttctttcctagattagatctaggtgctgttttgttgatttttgcttg--cacacactttg- 9789097  T
Q  201 ttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    ||||||||||| ||| |||||||||||||||||||| | |||||||||||||||||    
T  9789096 ttggtggttactactttcctttgctccacacatcatac-tttgtattggtgtggtt 9789042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 256
Target Start/End: Complemental strand, 18441716 - 18441462
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||| |||||||    
T  18441716 ttgatagtggattggagagttcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccc 18441617  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttct----cacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacact 196  Q
    || || ||||||||||| |  | || |||||||| |    ||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  18441616 tctccgtttatcttgtgcttgt-gtattgtgtttttttttcacttctttcctagattagatctaggtgctgttttgttgattattgcttg--cacacact 18441520  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    ||| ||||||||||| ||| |||||||||||||||||| ||  |||||||||||||||||    
T  18441519 ttg-ttggtggttactactttcctttgctccacacatc-ttactttgtattggtgtggtt 18441462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 16409575 - 16409824
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  16409575 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccc 16409674  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacacttt 198  Q
    || |||||||||||||| |   |||||| || || |||| ||||||||||||||||||||||||| |||| |||||||||||||||||  ||| ||||||    
T  16409675 tctccttttatcttgtgct-tgtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttg--cacccacttt 16409771  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
    | || |||||||| ||| |||||||||||||||||||| | ||||||||||||||    
T  16409772 g-ttagtggttactactttcctttgctccacacatcatac-tttgtattggtgtg 16409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 16544509 - 16544774
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  16544509 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 16544608  T
Q  101 tcccct---tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacac 195  Q
    || |||   ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||  | | |  |    
T  16544609 tctcctttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagc 16544706  T
Q  196 tttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  16544707 tttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 16544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 16546731 - 16546996
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  16546731 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 16546830  T
Q  101 tcccct---tttatcttgtgatccttgtt-ttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacac 195  Q
    || |||   ||||||||||| |  | |||  | |||||| ||||||||||||||||| ||| ||||||||||||||||| || |||||||  | | |  |    
T  16546831 tctcctttgtttatcttgtgtt--tagttgctttgtttcacacttgtttcctagattggatttaggtggtgttttgttgtttcttgcttgctcaataagc 16546928  T
Q  196 tttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||||||||||||| |||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  16546929 tttgtttggtggttatcactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 16546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 256
Target Start/End: Original strand, 26177982 - 26178234
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  26177982 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccc 26178081  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacacttt 198  Q
    || |||||||||||||| |   |||||| || || |||| ||| ||||||||||||||||||||| |||| |  ||||||||||||||  ||||||||||    
T  26178082 tctccttttatcttgtgct-tgtgttttatgcttttcactttgattcctagattagatctaggtgttgttatcattgattattgcttg--cacacacttt 26178178  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    | || |||||||| ||| |||||||||||||||||| ||  || ||||||||||||||    
T  26178179 g-ttagtggttactactttcctttgctccacacatc-ttacttcgtattggtgtggtt 26178234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 2 - 256
Target Start/End: Original strand, 26170862 - 26171114
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  26170862 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccc 26170961  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctca-cttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacacttt 198  Q
    || |||||||||||||| |   |||||| || || |||  ||| ||||||||||||||||||||| |||| |  | ||||||||||||  ||||||||||    
T  26170962 tctccttttatcttgtgct-tgtgttttatgcttttcattttgattcctagattagatctaggtgttgttatcatcgattattgcttg--cacacacttt 26171058  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    | || ||| |||| ||| |||||||||||||||||| ||  || ||||||||||||||    
T  26171059 g-ttagtgcttactactttcctttgctccacacatc-ttacttcgtattggtgtggtt 26171114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 30182688 - 30182917
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || ||| ||||||||||||||||||||| |||||||||| ||||||  |||||||   ||||  ||    
T  30182688 ttgatagtggattggagagttcaatctctcctccagagtatgtcaagtttggaccgaactggatgaacaatct-ttggtgtgtttgtttctctctt--ct 30182784  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttg 199  Q
    | |||||||||||||| |   ||||||||| || |||| ||||||||||||||||||||||||| |||| ||||||||||||| |||  ||  |||||||    
T  30182785 ctccttttatcttgtgct-tgtgttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgtttg--cattcactttg 30182881  T
Q  200 tttggtggttaccactctcctttgctccacacatcat 236  Q
     ||  ||||||| ||| ||||||||||||||||||||    
T  30182882 -ttattggttactactttcctttgctccacacatcat 30182917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 13343160 - 13343389
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||| ||||||||||||||||||||||||||| ||| ||  |||||||   ||||  ||    
T  13343160 ttgatagtggattggagagttcaatctctcctccagagtaggtcatgtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctctt--ct 13343256  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    | |||||||| || ||   |||||  |||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||  ||  |||||    
T  13343257 ctccttttatattttg---cttgtggtttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttg--cattcactt 13343351  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcat 236  Q
    || ||  ||||||| ||| ||||||||||||||||||||    
T  13343352 tg-ttattggttactactttcctttgctccacacatcat 13343389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 256
Target Start/End: Complemental strand, 36074111 - 36073863
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||  |||||||   ||||  ||    
T  36074111 ttgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggaccgaactggatgaacaatct-ttggtgtgtttgtttctctctt--ct 36074015  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    | |||||||| || ||   |||||  |||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||  ||  |||||    
T  36074014 ctccttttatgttttg---cttgtgatttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg--cattcactt 36073920  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    || ||  ||||||  ||| ||||||||||||||||||| |  |||||||||||||||||    
T  36073919 tg-ttattggttattactttcctttgctccacacatca-tagtttgtattggtgtggtt 36073863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 13239872 - 13240016
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||| | ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  13239872 caatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaat-ttttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 13239968  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt 169  Q
     ||||||||||| |||| ||| || |||||||||||||||||| ||||    
T  13239969 ggttttgtgtttttcactttgattactagattagatctaggtgttgtt 13240016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 25412881 - 25413042
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| ||   ||    
T  25412881 caatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttg---ct 25412974  T
Q  123 tgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||  |||||| || || | ||| |||||||||||||| |||||| |||| |||||||||||||||||    
T  25412975 tgtggtttgtgcttttctctttgattcctagattagatataggtgctgttattgttgattattgcttg 25413042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 37439262 - 37439313
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  37439262 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 37439313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 213586 - 213633
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| |  ||||||||||||||||||||||||||||||||    
T  213586 caatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 213633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 5058166 - 5058212
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  5058166 caatctctcctctagagtaggtcaag-ttggaccgaactgggtgaaca 5058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 28278437 - 28278493
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||| ||||||||    
T  28278437 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaacaat-tcttggtg 28278493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 32636945 - 32637088
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||| | ||  ||||||||||| |||||||||||||| |||||||| ||||||  |||||||   |||||||||||  ||||||||||| |  |    
T  32636945 caatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgtttctctcttccctccc--tttatcttgtgcttgt 32637040  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt 169  Q
      ||||| |||| |||| ||| || |||||||||||||||||| ||||    
T  32637041 gattttgagtttttcactttgattactagattagatctaggtgttgtt 32637088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 30682852 - 30682809
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  30682852 ttcctagattagatctaggtgttgttattgttgattattgcttg 30682809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 40147382 - 40147428
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  40147382 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 40147428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 39468516 - 39468439
Alignment:
Q  107 tttatcttgtgatccttgttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattg 182  Q
    ||||||||||| || | |||||||| || |||||| | || |||||||||||||||||| |||| |||||||||||||    
T  39468516 tttatcttgtgctcgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattg 39468439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 2e-93; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 9987301 - 9987579
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg-cttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9987301 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccc 9987400  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgt 200  Q
    || ||||||||||||||||  | || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||     
T  9987401 tctccttttatcttgtgattgt-gtatagtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttg--cacacactttga 9987497  T
Q  201 ttggtggttaccactctcctttgctccacacatcat-tcttttgtattggtgtggttcgatcaaggagatcggaattcacaaca 283  Q
    |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||    |||||||||||||||||||    
T  9987498 ttggtggttaccactctcctttgctccacacatcatatttttcgtattggtgtggttcgat--ttgagatcggaattcacaaca 9987579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 2 - 284
Target Start/End: Original strand, 21054058 - 21054336
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  21054058 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctcttggtgtatttgttttcttcttccct 21054157  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtt 201  Q
    | ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||    
T  21054158 ctccttttatcttgtgat-tgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttg--cacacacttagtt 21054254  T
Q  202 tggtggttaccactctcctttgctccacacatcat-tcttttgtattggtgtggttcgatcaaggagatcggaattcacaacac 284  Q
    ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||    ||||||||||||||||||||    
T  21054255 tggtggttaccactctcctttgctccacacatcatatttcttgtattggtgtggttcgat--ttgagatcggaattcacaacac 21054336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 40282477 - 40282711
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  40282477 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccct 40282576  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttg-t 200  Q
    | ||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  40282577 ctccttttatcttgtgat-tgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcacacacactttgtt 40282675  T
Q  201 ttggtggttaccactctcctttgctccacacatcat 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  40282676 ttggtggttaccactctcctttgctccacacatcat 40282711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 20622305 - 20622072
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20622305 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccct 20622206  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtt 201  Q
    | ||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20622205 ctccttttatcttgtgattgt-gtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcacacacactttgtt 20622107  T
Q  202 tggtggttaccactctcctttgctccacacatcat 236  Q
    |||||||||| ||| ||||||||||||||||||||    
T  20622106 tggtggttactactttcctttgctccacacatcat 20622072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 9036534 - 9036799
Alignment:
Q  20 gtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctcccctt--ttatcttgtg 117  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||||||||    
T  9036534 gtacaatctctcctcgagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatcttgtg 9036633  T
Q  118 atccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtttggtggttaccactct 217  Q
    ||  | | |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||    
T  9036634 attgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaaacactttgtttggtggttaccactct 9036732  T
Q  218 cctttgctccacacatcattcttttgtattggtgtggttcgatcaa--ggagatcggaattcacaaca 283  Q
    |||| ||||||||||||| || |||| ||||||||||||||||| |  || |||||||||||||||||    
T  9036733 ccttagctccacacatca-tcctttgcattggtgtggttcgatctagtggggatcggaattcacaaca 9036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 44203732 - 44203995
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  44203732 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 44203831  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  44203832 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 44203931  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  44203932 tttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 44203995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 256
Target Start/End: Original strand, 51765497 - 51765747
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || ||||| |||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  51765497 ttgatagtggattggagagttcaatctctcctccagagtaggacaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccct 51765595  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    | ||||||||||||||   |||||  |||||| || |||| ||||||||||||||||||||||||| |||| ||||||||||||||||| || |||   |    
T  51765596 ctccttttatcttgtg---cttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcac---t 51765689  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    |  || |||||||| ||| ||||||||||||||||||| | ||| ||||||||||||||    
T  51765690 taattagtggttactactttcctttgctccacacatca-tatttcgtattggtgtggtt 51765747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 8550834 - 8550670
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttct-tcttccctccccttttatcttgtgatcc 121  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||| | || |  ||||||||||| |      
T  8550834 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgttttctctctt-cttctctctttatcttgtgcttg 8550737  T
Q  122 ttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |  |||||||||| |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  8550736 tgattttgtgtttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttg 8550670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 13316420 - 13316238
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| || |||  |||||||   ||||  ||    
T  13316420 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttagtgagtttgtttctctctt--ct 13316324  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    | |||||||| || ||   |||||  ||||||||| |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  13316323 ctccttttatattttg---cttgtggtttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 13316238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 20762793 - 20762952
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||  || ||||||||||||||||||||||| ||||| |||||| ||||||  |||||||   ||||| ||||  ||||||||| || |  |    
T  20762793 caatctctcctacagagtaggtcaagtttggaccgaactaggtgaccaatct-ttggtgtgtttgtttctctcttctctcc--ttttatcttttgcttgt 20762889  T
Q  123 tgttttgtgtttctcacttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaa 188  Q
     |||||||| || ||||||    ||||||||||||||||||| |||| |||||||||||||||||||    
T  20762890 ggttttgtgcttttcactt----cctagattagatctaggtgctgttattgttgattattgcttgaa 20762952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 3189451 - 3189590
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  3189451 caatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 3189547  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtg 164  Q
     |||||||| || |||| ||| || ||||||||||||||||||    
T  3189548 ggttttgtgcttttcactttgattactagattagatctaggtg 3189590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 3198268 - 3198407
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  3198268 caatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 3198364  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtg 164  Q
     |||||||| || |||| ||| || ||||||||||||||||||    
T  3198365 ggttttgtgcttttcactttgattactagattagatctaggtg 3198407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 3207107 - 3207246
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  3207107 caatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 3207203  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtg 164  Q
     |||||||| || |||| ||| || ||||||||||||||||||    
T  3207204 ggttttgtgcttttcactttgattactagattagatctaggtg 3207246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 290 - 434
Target Start/End: Original strand, 44907188 - 44907332
Alignment:
Q  290 tagaaagccttgatgactcctttagaacttctcttgatgcttatgatgaagcttcttctttcattgaaatgaatccaaaaatgccaccttctaaaagatt 389  Q
    |||||||||| |||  |||||||||| || | || ||||| ||||||||| |||| |   ||||||| ||| |||||| |||||||||||||||||||||    
T  44907188 tagaaagcctagatagctcctttagatctaccctagatgcatatgatgaaacttcct---tcattgagatggatccaagaatgccaccttctaaaagatt 44907284  T
Q  390 ctttataaactcacaagatt---tcaaatttcattttccaacctcaca 434  Q
    ||| || || ||||| ||||    ||||||| ||||||||||||||||    
T  44907285 cttcatgaattcacatgattccaacaaatttgattttccaacctcaca 44907332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 42298022 - 42297964
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    |||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||    
T  42298022 caatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtg 42297964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 3157003 - 3157147
Alignment:
Q  40 taggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatccttgttttgtgtttctcac 139  Q
    ||||||||||| |||||||||||||| |||||||| ||||||  ||||||    ||||| |||||  |||||||| || |  | |||||||| || ||||    
T  3157003 taggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttcctctcttctctccc--tttatcttttgcttgtggttttgtgcttttcac 3157098  T
Q  140 tt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    || | ||||||||||||||||||||| |||| |||||||||||||||||    
T  3157099 tttgattcctagattagatctaggtgctgttattgttgattattgcttg 3157147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 29136368 - 29136427
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgct 83  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||| || ||||||||||    
T  29136368 caatctctcctccagagtaggtcaagtttggaccgaactaggtgaac-atttcttggtgct 29136427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 44455378 - 44455438
Alignment:
Q  124 gttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattg 182  Q
    ||||||||||| |||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  44455378 gttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattg 44455438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 13547136 - 13547090
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  13547136 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 13547090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 13549047 - 13549001
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  13549047 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 13549001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 31925754 - 31925708
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  31925754 caatctctcctctagagtaggtcaag-ttggaccgaactaggtgaaca 31925708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 37168419 - 37168465
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  37168419 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 37168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 37559897 - 37559751
Alignment:
Q  40 taggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatccttgttttgtgtttctcac 139  Q
    ||||||||||| |||||||||| ||| |||||||| ||||||  ||||||    ||||| ||||||||| ||||| || |  | |||||||| || ||||    
T  37559897 taggtcaagtt-ggaccgaacttggtcaacaatct-ttggtgtgtttgttcctctcttctctccccttt-atcttttgcttgtggttttgtgcttttcac 37559801  T
Q  140 tt-gtttcctagatt-agatctaggtggtgtt-ttgttgattattgcttg 186  Q
    || | |||||||||| ||||||||||| |||| |||||||||||||||||    
T  37559800 tttgattcctagatttagatctaggtgctgttattgttgattattgcttg 37559751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 186
Target Start/End: Original strand, 10925464 - 10925504
Alignment:
Q  147 ctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  10925464 ctagattagatctaggtgttgttattgttgattattgcttg 10925504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 7e-84; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 20343997 - 20344266
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgcttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20343997 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccc 20344095  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtg---ttttgttgattattgcttgaacacacactt 197  Q
    || ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| ||   |||||| |||| |||||||  |||||||||    
T  20344096 tctccttttatcttgtgattgt-gttttgtgtttctcacttgtttcctagattagatctaggtgctggttttttgtcgattgttgcttg--cacacactt 20344192  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggttcgatcaaggagatcgg 272  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  20344193 tgtttggtggttaccactctcctttgctccacacatcattc-tttgcattggtgtggttcgatctaggcgatcgg 20344266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 18388828 - 18388565
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  18388828 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 18388729  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || | || |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  18388728 tctctttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 18388629  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  18388628 ttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 18388565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 18392264 - 18392001
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  18392264 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 18392165  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  18392164 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 18392065  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||  | ||||||||||||||| |  ||||||||||||||||||||||    
T  18392064 ttcggtggttaccactctctgtcgctccacacatcattattctttgtattggtgtggttcgatc 18392001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 6594626 - 6594363
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  6594626 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 6594527  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  6594526 tccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 6594427  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  6594426 tttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 6594363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 6592408 - 6592145
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  6592408 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 6592309  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   ||| |||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  6592308 tccttgtttttcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 6592209  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  6592208 tttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 6592145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 1560734 - 1560470
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||||||    
T  1560734 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatctcttggtgtatttgttttcttcttccct 1560635  T
Q  102 cccct--tttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacacttt 198  Q
    | |||  |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||| |    
T  1560634 ctccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatatactct 1560535  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  1560534 gttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 1560470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 32060390 - 32060127
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||    
T  32060390 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaacttggtgaacaatctctttgtgtttattgttttcttcttccc 32060291  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  32060290 tccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 32060191  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||| ||||||||||||||||||    
T  32060190 ttcggtggttaccactctccgtcgctccacacatcattattctttatattggtgtggttcgatc 32060127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 253
Target Start/End: Complemental strand, 43504201 - 43503975
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| |  |    
T  43504201 caatctctcctccatagtaggtcaagtttggatcgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatcttgtgcttgt 43504102  T
Q  123 tgttttgtgtttctcactt-gtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtttggtggttaccactctcctt 221  Q
     ||||| || || |||||| | |||||||||||||||||| || |  |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  43504101 -gttttatgcttttcactttgattcctagattagatctagctgtt--tttgttgattattgcttgcacacacactttgtt-ggtggttaccactctcctt 43504006  T
Q  222 tgctccacacatcattcttttgtattggtgtg 253  Q
    |||||||||||||| | ||| |||||||||||    
T  43504005 tgctccacacatca-tatttcgtattggtgtg 43503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 39731469 - 39731653
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  39731469 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccct 39731567  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    | ||||||||||||||   |||||  |||||| || |||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  39731568 ctccttttatcttgtg---cttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttg 39731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 24790230 - 24790338
Alignment:
Q  131 gtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtttggtggttaccactctcctttgctccaca 230  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||| ||| ||||||||||    
T  24790230 gtttctcacctgtttcctagattagatctaggtggtgttttgttgattattacttg--cacgcactttgtttggtggttaccactttccgttgctccaca 24790327  T
Q  231 catcattcttt 241  Q
    |||||| ||||    
T  24790328 catcatacttt 24790338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 24789941 - 24790059
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg-cttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  24789941 ttgatagtggattggagagtactatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgtttttcttcttccc 24790040  T
Q  101 tccccttttatcttgtgat 119  Q
    || ||||||||||||||||    
T  24790041 tctccttttatcttgtgat 24790059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 182
Target Start/End: Original strand, 35854014 - 35854194
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||| ||    
T  35854014 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtgtttgtttctctcttctct 35854113  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattg 182  Q
     ||||||||||||||| |   |||||| || || |||| ||| ||||||||||||||||||||| |||| |||||||||||||    
T  35854114 -cccttttatcttgtgct-tgtgttttatgcttttcactttgcttcctagattagatctaggtgctgttattgttgattattg 35854194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 25767028 - 25766780
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||  |||||||   | ||| ||    
T  25767028 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttagaccgaactgggtgaacaatctcttggtgtgtttgtttctctattctct 25766929  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
     |||||||||||| |  | |||||  ||||||||| |||| ||| | ||||||||||||||||||| |||| |||||||||||||||||  | | |||||    
T  25766928 -cccttttatctttt--tgcttgtgatttgtgtttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttg--cgctcactt 25766834  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
    || ||  ||||||| ||| | ||||||||||||||||| | ||| |||||||||||    
T  25766833 tg-ttattggttactacttttctttgctccacacatca-tatttcgtattggtgtg 25766780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 48408926 - 48409152
Alignment:
Q  24 aatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcctt 123  Q
    ||||||||||| || ||| ||||||||| |||||||||||||||||||| ||||||||  |||||||   ||||| ||||| ||||||||| |  | |||    
T  48408926 aatctctcctccagagtatgtcaagtttagaccgaactgggtgaacaatttcttggtgtgtttgtttctctcttctctccc-ttttatctttt--tgctt 48409022  T
Q  124 gt--tttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttgtttggtggttaccactctcc 219  Q
    ||  |||||| || |||||| | | ||||||||||||||||||| |||| |||||||||||||||||  ||| |||||||||   ||||||| ||| |||    
T  48409023 gtgatttgtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttg--cactcactttgttat-tggttactactttcc 48409119  T
Q  220 tttgctccacacatcattcttttgtattggtgtg 253  Q
    |||||||||||||||| | ||| |||||||||||    
T  48409120 tttgctccacacatca-tatttcgtattggtgtg 48409152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 25615953 - 25616137
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttt---tcttcttc 98  Q
    ||||| |||||| |||| |  |||||||||||| || |||||||||||||||||||||||||| ||||||||| ||||||  |||||||   ||||||||    
T  25615953 ttgatagtggattagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggcgaacaatct-ttggtgtgtttgtttctctcttcttc 25616051  T
Q  99 cctccccttttatcttgtgatccttgttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||    ||||||||||| |  | |||||||| || |||||| | ||||||||||||||||||||| |||| |||||||||||||||||    
T  25616052 tctc----tttatcttgtgcttgtggttttgtgcttttcacttcgattcctagattagatctaggtgttgttattgttgattattgcttg 25616137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 23555161 - 23555323
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||| ||  |||||||   ||||  ||| ||||||||||| || |  |    
T  23555161 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctctt--ctctccttttatcttttgcttgt 23555257  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     || |||||||| | || ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  23555258 ggtattgtgttttttactttgattcctagattagatctaggtgttgttattgttgattattgcttg 23555323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 253
Target Start/End: Original strand, 4178894 - 4179118
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || | |||||||||||| ||| |||| |||||||||||| ||||||  |||||||   ||||| ||||  |||||| || ||   ||    
T  4178894 caatctctcctccagagcaggtcaagtttgaaccaaactaggtgaacaatct-ttggtgtgtttgtttctctcttctctcc--ttttatattttg---ct 4178987  T
Q  123 tgt--tttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttgtttggtggttaccactctc 218  Q
    |||  ||||||||| |||||| | ||||||||||||||||||||| |||| ||||||||||||||||  |||  ||||||| ||  ||||||| ||| ||    
T  4178988 tgtggtttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgctt--acattcactttg-ttattggttactactttc 4179084  T
Q  219 ctttgctccacacatcattcttttgtattggtgtg 253  Q
    ||||||||||||||||| |  ||||||||||||||    
T  4179085 ctttgctccacacatca-tagtttgtattggtgtg 4179118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 29991174 - 29991225
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29991174 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 29991225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 34310763 - 34310712
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  34310763 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 34310712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 19502299 - 19502443
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||| |||||||||||| |||| |||||||||||||| ||||||  |||||||   ||||| |||||  ||||| ||||| |  |    
T  19502299 caatctctcctccagagtaagtcaagtttggaacgaagtgggtgaacaatct-ttggtgtgtttgtttctctcttctctccc--tttattttgtgcttgt 19502395  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt 169  Q
     |||||| |||| |||| ||| || |||||||||||||||||| ||||    
T  19502396 ggttttgagtttttcactttgattactagattagatctaggtgttgtt 19502443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 2390403 - 2390469
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttt 90  Q
    |||||||||||| || |||||||||||| |||||||||| |||||| |||||||||||| | ||||||    
T  2390403 caatctctcctccagagtaggtcaagtt-ggaccgaactaggtgaataatctcttggtgttgttgttt 2390469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 22270094 - 22270150
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    |||||||||||| || |||||||||||| |||||||||||||||||| |||||||||||    
T  22270094 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaac-atctcttggtg 22270150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 27347938 - 27348095
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||| | ||  ||||||||||| |||||||||||||| |||||||| ||||||  ||||||    ||||| ||| |  |||||||| || |  |    
T  27347938 caatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatct-ttggtgtgtttgttcctctcttctctcac--tttatcttttgcttgt 27348033  T
Q  123 tgttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattg 182  Q
     ||||||||||| |||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  27348034 ggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattg 27348095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 43864462 - 43864526
Alignment:
Q  124 gttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||||||| || |||||| | ||||||||||||||||||||| |||| |||||||||||||||||    
T  43864462 gttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 43864526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 48489552 - 48489711
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||| | ||  ||||||||||| |||||||||||||| |||||||| ||||||  ||||||    ||||| | |||  |||||||| || |  |    
T  48489552 caatctctcccccagattaggtcaagtt-ggaccgaactgggtaaacaatct-ttggtgtgtttgttcctctcttctcgccc--tttatcttttgcttgt 48489647  T
Q  123 tgttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgct 184  Q
     |||||||| || |||||| | ||||||||||||||||||||| |||| |||||||||||||||    
T  48489648 ggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgct 48489711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 32358101 - 32358055
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  32358101 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 32358055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 18126864 - 18126928
Alignment:
Q  124 gttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||||||| || |||||| | ||||||||||||||||||||| |||| || ||||||||||||||    
T  18126864 gttttgtgcttttcactttgattcctagattagatctaggtgttgttattcttgattattgcttg 18126928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 36574470 - 36574434
Alignment:
Q  124 gttttgtgtttctcacttgtttcctagattagatcta 160  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  36574470 gttttgtgtttttcacttgattcctagattagatcta 36574434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 2672 - 2409
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||| || ||| || ||||||||||||||||    
T  2672 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttttgtgtttattgttttcttcttccc 2573  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  2572 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 2473  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  2472 tttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 2409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 4e-76; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 6266791 - 6267023
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg-cttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6266791 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccc 6266890  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgt 200  Q
    || || ||||||||||| |   ||| |||||||| |||||| |||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||    
T  6266891 tctccgtttatcttgtgct-tgtgtattgtgtttttcacttctttcctagattagatctaggtgttgttttgttgatttttgctt--acacacactttgt 6266987  T
Q  201 ttggtggttaccactctcctttgctccacacatcat 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  6266988 ttggtggttaccactctcctttgctccacacatcat 6267023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 12647454 - 12647191
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  12647454 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 12647355  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  12647354 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 12647255  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  12647254 ttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 12647191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 13656100 - 13655834
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctctt-ggtgctt-ttgttttcttcttcc 99  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||||||||    
T  13656100 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgtttgttgttttcttcttcc 13656001  T
Q  100 ctcccctt--ttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacact 196  Q
    ||| ||||  ||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | |||    
T  13656000 ctctccttgtttatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatatact 13655901  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
     |||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  13655900 ctgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 13655834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 23 - 256
Target Start/End: Original strand, 32289685 - 32289916
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctc-ttggtgcttttgttttcttcttccctccccttttatcttgtgatcc 121  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||   |||||||| ||||||||| |||||||||||||| |      
T  32289685 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtccttgttttcctcttccctctccttttatcttgtgct-t 32289783  T
Q  122 ttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttgtttggtggttaccactctcc 219  Q
     |||||| || || |||| ||||||||||||||||||||||||| |||| |||||||||||||||||  ||| ||||||| || |||||||| ||| |||    
T  32289784 gtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttg--cacccactttg-ttagtggttactactttcc 32289880  T
Q  220 tttgctccacacatcattcttttgtattggtgtggtt 256  Q
    ||||||||||||||| ||  |||||||||||||||||    
T  32289881 tttgctccacacatc-ttactttgtattggtgtggtt 32289916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 4484398 - 4484151
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||||||    
T  4484398 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacagaactgggtgaacaatct-ttggtgtctttgttttcttcttccct 4484300  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttg 199  Q
    | |||||||||||||| |  | ||||| || || |||| ||||||||||||||||||||||||| |||| |||||||||||||||||  ||| |||||||    
T  4484299 ctccttttatcttgtgcttgtggtttt-tgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttg--cactcactttg 4484203  T
Q  200 tttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
     ||  ||||||| ||| ||||||||||||||||||| | ||| |||||||||||    
T  4484202 -ttattggttactactttcctttgctccacacatca-tatttcgtattggtgtg 4484151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 30833446 - 30833693
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||||  ||||||||| ||||||||    
T  30833446 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatct-ttggtgtctttgttttcctcttccct 30833544  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    | ||||||||||||||   |||||  |||||| || |||| ||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||       
T  30833545 ctccttttatcttgtg---cttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcaca--- 30833638  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
    |  ||  ||||||| ||| ||||||||||||||||||| | ||| |||||||||||    
T  30833639 taattaatggttactactttcctttgctccacacatca-tatttcgtattggtgtg 30833693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 4503201 - 4503019
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||    
T  4503201 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ct 4503105  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    | |||||||||||||| |   ||||||||| || |||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  4503104 ctccttttatcttgtgct-tgtgttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttg 4503019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 36988123 - 36987961
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  36988123 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 36988027  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     | |||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  36988026 ggctttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttg 36987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 6595053 - 6594890
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||  |||||||   ||||| || |||||||||||| || |  |    
T  6595053 caatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatct-ttggtgtgtttgtttctctcttctct-cccttttatcttttgcttgt 6594956  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||||||| || |||| ||| || |||||||||||||||||| |||| |||||||||||| ||||    
T  6594955 ggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattacttg 6594890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 45099854 - 45100036
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||    
T  45099854 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ct 45099950  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    | |||||||| || ||   |||||  |||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  45099951 ctccttttatattttg---cttgtgatttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 45100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 5723303 - 5723252
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  5723303 caatctctcctctagagtaggttaagtttggaccgaactgggtgaacaatct 5723252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 36205712 - 36205551
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| |||||||| || ||   ||    
T  36205712 caatctatcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatattttg---ct 36205619  T
Q  123 tgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||  ||| || || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  36205618 tgtggtttctgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 36205551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 2334465 - 2334414
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatct 74  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||    
T  2334465 caatctctcctccagagtaggtcaagtttggaccgaactgggggaacaatct 2334414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 17057298 - 17057255
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  17057298 ttcctagattagatctaggtgctgttattgttgattattgcttg 17057255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 17085281 - 17085238
Alignment:
Q  144 ttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  17085281 ttcctagattagatctaggtgctgttattgttgattattgcttg 17085238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 45727050 - 45727096
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  45727050 caatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 45727096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 35446928 - 35446885
Alignment:
Q  26 tctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||||||| || |||||||||||| |||||||||||||||||||    
T  35446928 tctctcctccagagtaggtcaagtt-ggaccgaactgggtgaaca 35446885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 38312458 - 38312522
Alignment:
Q  124 gttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    |||||||| || |||||| | ||||||||||||||||||||| |||| ||||||||| |||||||    
T  38312458 gttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattgttgcttg 38312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 6e-72; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 8395703 - 8395967
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  8395703 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 8395802  T
Q  101 tc-cccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacacttt 198  Q
    || || || |||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | |||||    
T  8395803 tctccattgtatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgttttttgcttgcacaataaacttt 8395902  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  8395903 gtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 8395967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 8393494 - 8393758
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  8393494 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 8393593  T
Q  101 tc-cccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacacttt 198  Q
    || || || |||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||     
T  8393594 tctccattgtatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaacttc 8393693  T
Q  199 gtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    ||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  8393694 gtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 8393758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 7125002 - 7125265
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| || ||||||||||    ||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  7125002 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagcaaagaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccc 7125101  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  7125102 tccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 7125201  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||| ||||||||||||||||||    
T  7125202 ttcggtggttaccactctccgtcgctccacacatcattattctttatattggtgtggttcgatc 7125265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 7122783 - 7123046
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| ||||||||||||||| |  ||||||||||    |||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  7122783 ttgatagtggattggagagtacaatctctcctccatagtaggtcaagcaaagaccgaactgggtgaacaatttctttgtgtttattgttttcttcttccc 7122882  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    |||   |||||||||||||  ||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  7122883 tccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 7122982  T
Q  200 tttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    || ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  7122983 ttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 7123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 31495363 - 31495143
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||||||| | | ||| |    
T  31495363 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatccttttatctt 31495264  T
Q  123 -------tgttttgtgtttctcactt-gtttcctagattagatctaggtggtgttttgttgattattgcttgaacacacactttgtttggtggttaccac 214  Q
           |||||| || || |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||| ||    
T  31495263 gtgcttgtgttttatgcttttcactttgtttcctagattagatctaggtgctgttttgttgattattgcttgcacacacactttg-ttgatggttactac 31495165  T
Q  215 tctcctttgctccacacatcat 236  Q
    | ||||||||||||||||||||    
T  31495164 tttcctttgctccacacatcat 31495143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 5136165 - 5136429
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  5136165 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 5136264  T
Q  101 tcccct--tttatcttgtgatccttgttt--tgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacac 195  Q
    || |||  ||||||||||| |  ||| ||  | |||||| |||||| ||||||||||||||||| ||| ||||||||||  | |||||||  | | |  |    
T  5136265 tctccttgtttatcttgtgtt--ttggttgctttgtttcacacttggttcctagattagatcta-gtgatgttttgttgtctcttgcttgctcaataagc 5136361  T
Q  196 tttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  5136362 tttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 5136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 5138390 - 5138654
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  5138390 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 5138489  T
Q  101 tcccct--tttatcttgtgatccttgttt--tgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacac 195  Q
    || |||  ||||||||||| |  ||| ||  | |||||| |||||| ||||||||||||||||| ||| ||||||||||  | |||||||  | | |  |    
T  5138490 tctccttgtttatcttgtgtt--ttggttgctttgtttcacacttggttcctagattagatcta-gtgatgttttgttgtctcttgcttgctcaataagc 5138586  T
Q  196 tttgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  5138587 tttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 5138654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 13992361 - 13992114
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||  |||||||   ||||| ||    
T  13992361 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacaatct-ttggtgtgtttgtttctctcttctct 13992263  T
Q  102 ccccttttatcttgtgatccttgt--tttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactt 197  Q
    ||| ||||||||| |  | |||||  |||||| || |||||| | | ||||||||||||||||||| |||| |||||||||||||||||  ||| |||||    
T  13992262 ccc-ttttatctttt--tgcttgtgatttgtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttg--cactcactt 13992168  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtg 253  Q
    ||||   ||||||| ||| ||||||||||||||||||| | ||| |||||||||||    
T  13992167 tgttat-tggttactactttcctttgctccacacatca-tatttcgtattggtgtg 13992114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 5370130 - 5369968
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||||| ||| ||  |||||||   ||||  ||| ||||||||||| || |  |    
T  5370130 caatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatct-ttgatgtgtttgtttatctctt--ctctccttttatcttttgcttgt 5370034  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||||||| || |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  5370033 ggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttg 5369968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 56178684 - 56178522
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  56178684 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 56178588  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||||||| || |||| ||  ||||||||||||||||||||| |||| ||||| |||||||||||    
T  56178587 ggttttgtgcttttcactttcattcctagattagatctaggtgttgttattgtttattattgcttg 56178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 48143164 - 48143330
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  |    
T  48143164 caatctctcctccagagtaggtcaagtttggaccaaactgggtgaacaatct-ttggtgtgtttgtttctctctt--ctctccttttatcttttgcttgt 48143260  T
Q  123 tgttttgtg----tttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
      |||||||    ||| |||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  48143261 gattttgtgcttttttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttg 48143330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 2209836 - 2209893
Alignment:
Q  24 aatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||    
T  2209836 aatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtg 2209893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 29999853 - 29999806
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||    
T  29999853 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 29999806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 50262748 - 50262690
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 81  Q
    |||||| ||||| || ||||||||   ||||||||||||||||||||||||||||||||    
T  50262748 caatctttcctccagagtaggtcattgttggaccgaactgggtgaacaatctcttggtg 50262690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 52095409 - 52095248
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||||| | ||||||  |||||||   ||||  ||| ||||||||||| |  |  |    
T  52095409 caatctctcctccagagtagg-caagtttggaccgaactgggtgaacaat-ttttggtgtgtttgtttctctctt--ctctccttttatcttttccttgt 52095314  T
Q  123 tgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     |||||||| || || | |||  |||||||||||||||||||| |||| |||||||||||| ||||    
T  52095313 ggttttgtgcttttctctttgactcctagattagatctaggtgttgttattgttgattattacttg 52095248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 52082708 - 52082549
Alignment:
Q  26 tctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatccttgt 125  Q
    ||||||||| || ||||||||||||| ||||||  |||||||||||||| ||||||  |||||||   ||||  ||| ||||||||||| || |  | ||    
T  52082708 tctctcctccagagtaggtcaagtttagaccgatttgggtgaacaatct-ttggtgtgtttgtttatctctt--ctctccttttatcttttgcttgtggt 52082612  T
Q  126 tttgtgtttctc-acttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    ||| || || ||   ||| ||||||||| ||||||||||| |||| |||||||||||||||||    
T  52082611 tttatgcttttctttttgattcctagataagatctaggtgctgttattgttgattattgcttg 52082549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 29056573 - 29056610
Alignment:
Q  124 gttttgtgtttctcacttgtttcctagattagatctag 161  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  29056573 gttttgtgtttttcacttgattcctagattagatctag 29056610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 41964537 - 41964580
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtga 67  Q
    |||||||||||| || |||||||||| ||||||||||||||||||    
T  41964537 caatctctcctccagagtaggtcaag-ttggaccgaactgggtga 41964580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 126; Significance: 8e-65; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 2 - 237
Target Start/End: Complemental strand, 3794 - 3557
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || |||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  3794 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccc 3695  T
Q  101 tccccttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttg 199  Q
    || |||| |||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | | ||||||    
T  3694 tctccttgtatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttg 3595  T
Q  200 tttggtggttaccactctcctttgctccacacatcatt 237  Q
    || ||||||||||||||||| | |||||||||||||||    
T  3594 ttcggtggttaccactctccgtcgctccacacatcatt 3557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 6373 - 6638
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| |||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||    
T  6373 ttgatagtggattggagagtacaaactctcctccagagtaggttaagtttggaccgaactgggtgaccaatctctttgtgttattgttttcttcttccct 6472  T
Q  102 cccc---ttttatcttgtgatccttgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactt 197  Q
    | ||   ||||||||||||||  ||| |||||||||| ||||||||||||||||| |||||||||||||| |||||| || ||||||| || | | ||||    
T  6473 ctccttgttttatcttgtgattgttgctttgtgtttcacacttgtttcctagattggatctaggtggtgtattgttgtttcttgcttgcacaataaactt 6572  T
Q  198 tgtttggtggttaccactctcctttgctccacacatcattct--tttgtattggtgtggttcgatc 261  Q
    |||||||||||||||||||||| | |||||||| |||||| |  ||||||||||||||||||||||    
T  6573 tgtttggtggttaccactctccgtcgctccacatatcattattctttgtattggtgtggttcgatc 6638  T

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Target: scaffold1808 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 2 - 202
Alignment:
Q  39 gtaggtcaagtttggaccgaactgggtgaacaatctcttggtgctt-ttgttttcttcttccctccccttttatcttgtgatccttgttttgtgtttctc 137  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||| |||| |||||||||||  ||| |||||||||| |    
T  2 gtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtatcttgtgattgttgctttgtgtttcac 101  T
Q  138 acttgtttcctagattagatctaggtggtgttttgttgattattgcttgaac-acacactttgtttggtggttaccactctcctttgctccacacatcat 236  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||| || | | |||||||| ||||||||||||||||| | ||||||||||||||    
T  102 acttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttaggtggttaccactctccgtcgctccacacatcat 201  T
Q  237 t 237  Q
    |    
T  202 t 202  T

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Target: scaffold0491 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 11230 - 10979
Alignment:
Q  1 gttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccc 100  Q
    |||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  11230 gttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccc 11132  T
Q  101 tccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacact 196  Q
    || ||||||||||||||   |||||  ||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||  ||| ||||    
T  11131 tctccttttatcttgtg---cttgtggtttgtgtttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttg--cacccact 11037  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    | | |   ||||||| ||| |||||||||||||| ||||| | |||||||||||||||||    
T  11036 tag-tcattggttactactttcctttgctccacatatcatac-tttgtattggtgtggtt 10979  T

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Target: scaffold0491; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 8804 - 8553
Alignment:
Q  1 gttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccc 100  Q
    |||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  8804 gttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtctttgttttcctcttccc 8706  T
Q  101 tccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacact 196  Q
    ||  |||||||||||||   |||||  |||||| || |||| ||||||||||||||||||||||||| |||| |||||||||||||||||  ||| ||||    
T  8705 tcttcttttatcttgtg---cttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttg--cacccact 8611  T
Q  197 ttgtttggtggttaccactctcctttgctccacacatcattcttttgtattggtgtggtt 256  Q
    | | |   ||||||| ||| |||||||||||||  ||||| | |||||||||||||||||    
T  8610 tag-tcattggttactactttcctttgctccacgtatcatac-tttgtattggtgtggtt 8553  T

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Target: scaffold0286 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 11657 - 11895
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||| ||    
T  11657 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtttatctcttctct 11756  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttct----cac-ttgt-ttcctagattag-atctaggtggtgtt-ttgttgattattgcttgaacacac 193  Q
     ||||||||||||||| |  |  |||  ||||| |    ||| |||| |||||||||||| ||||||||| |||| |||||||||||||||||  |||||    
T  11757 -cccttttatcttgtgcttgtgttttattgttttttttccactttgtattcctagattagtatctaggtgctgttattgttgattattgcttg--cacac 11853  T
Q  194 actttgtttggtggttaccactctcctttgctccacacatcat 236  Q
    |||||| || |||||||| ||| ||||||||||||||||||||    
T  11854 actttg-ttagtggttactactttcctttgctccacacatcat 11895  T

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Target: scaffold0002 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 434633 - 434863
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccct 101  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||| | ||||||  |||||||   ||||| ||    
T  434633 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatat-ttggtgtgtttgtttctctcttctct 434731  T
Q  102 ccccttttatcttgtgatccttgttttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttg 199  Q
     ||||||||||||||| |   ||||||||| || |||| ||| ||||||||||||||||||||| |||| ||||||||||||| ||||| ||||   ||     
T  434732 -cccttttatcttgtgct-tgtgttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgattgaaaacac---ttt 434826  T
Q  200 tttggtggttaccactctcctttgctccacacatcat 236  Q
      |  ||||||| ||| ||||||||||||||||||||    
T  434827 aataatggttactactttcctttgctccacacatcat 434863  T

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Target: scaffold1519 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 1015 - 1198
Alignment:
Q  2 ttgattgtggatgagagtgtacaatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtg-cttttgttttcttcttccc 100  Q
    ||||| ||||||  ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||||   ||||  |    
T  1015 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgtgttttgtttctctctt--c 1111  T
Q  101 tccccttttatcttgtgatccttgt--tttgtgtttctcac-ttgtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
    || ||||||||  | ||   |||||  |||||| || |||| ||| | |||||||||||||||||||||||| |||||||||||||||||    
T  1112 tctccttttatactttg---cttgtggtttgtgcttttcactttgatacctagattagatctaggtggtgttattgttgattattgcttg 1198  T

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Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 18051 - 18004
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  18051 caatctctcctccagggtaggtcaagtttggatcgaactgggtgaaca 18004  T

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Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 253
Target Start/End: Original strand, 114723 - 114949
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||||| || |||||| |||||| ||||||||||| |||||||||| ||||||   ||||||   ||||| ||||  ||||||||| |  |  |    
T  114723 caatctctcctccagagtaggttaagtttagaccgaactggatgaacaatct-ttggtgtgcttgtttctctcttctctcc--ttttatctttttcttgt 114819  T
Q  123 tgttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttgaacacacactttgtttggtggttaccactctcct 220  Q
    ||||||||| || |||||| | |||||||||||||| |||||| |||| ||||||||||||| |||    |||  |||| |   ||||||  ||| ||||    
T  114820 tgttttgtgcttttcactttgattcctagattagatataggtgttgttattgttgattattgattgtgttcac--tttgatat-tggttattactttcct 114916  T
Q  221 ttgctccacacatcattcttttgtattggtgtg 253  Q
    ||||||||||||||||  |||||||||||||||    
T  114917 ttgctccacacatcatagttttgtattggtgtg 114949  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 20462 - 20301
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctccccttttatcttgtgatcct 122  Q
    |||||||||| | ||  ||||||||||| |||||||||||||| |||||| | ||||||  ||||||    ||||| |||||  |||||||| || |  |    
T  20462 caatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaattt-ttggtgtgtttgttcctctcttctctccc--tttatcttttgcttgt 20367  T
Q  123 tgttttgtgtttctcactt-gtttcctagattagatctaggtggtgtt-ttgttgattattgcttg 186  Q
     ||||||||||| |||||| | ||||||||||||||||||||| |||| ||||| |||||||||||    
T  20366 ggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttaattattgcttg 20301  T

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Target: scaffold0466 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 7448 - 7494
Alignment:
Q  23 caatctctcctctagggtaggtcaagtttggaccgaactgggtgaaca 70  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  7448 caatctctcctctagagtaggttaagtt-ggaccgaactgggtgaaca 7494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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