View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1420_high_9 (Length: 476)

Name: NF1420_high_9
Description: NF1420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1420_high_9
NF1420_high_9
[»] chr1 (43 HSPs)
chr1 (40-461)||(8014193-8014614)
chr1 (1-43)||(23536065-23536107)
chr1 (1-41)||(15034778-15034818)
chr1 (1-41)||(24273253-24273293)
chr1 (1-41)||(30190255-30190295)
chr1 (1-44)||(5474414-5474457)
chr1 (1-44)||(8224765-8224808)
chr1 (1-44)||(43623011-43623054)
chr1 (1-43)||(4038073-4038115)
chr1 (1-43)||(15034657-15034699)
chr1 (6-44)||(15245457-15245495)
chr1 (1-43)||(26501112-26501154)
chr1 (1-37)||(27804269-27804305)
chr1 (1-41)||(34756427-34756467)
chr1 (6-41)||(32572940-32572975)
chr1 (1-43)||(27804384-27804426)
chr1 (6-44)||(41823180-41823218)
chr1 (6-44)||(50471765-50471803)
chr1 (1-42)||(32287966-32288007)
chr1 (6-43)||(40264046-40264083)
chr1 (1-38)||(45565397-45565434)
chr1 (1-41)||(4038194-4038234)
chr1 (1-41)||(6470719-6470759)
chr1 (1-41)||(44410311-44410351)
chr1 (1-45)||(49659213-49659256)
chr1 (6-37)||(23536173-23536204)
chr1 (1-44)||(27935604-27935647)
chr1 (1-44)||(28632618-28632661)
chr1 (1-44)||(29446747-29446790)
chr1 (6-41)||(32128048-32128083)
chr1 (6-41)||(37214924-37214959)
chr1 (1-44)||(38277412-38277455)
chr1 (2-45)||(44410431-44410474)
chr1 (6-41)||(48953587-48953622)
chr1 (1-39)||(28745799-28745837)
chr1 (1-43)||(31166308-31166350)
chr1 (6-44)||(34007441-34007479)
chr1 (1-39)||(40264149-40264187)
chr1 (6-44)||(45565500-45565538)
chr1 (1-38)||(37036982-37037019)
chr1 (1-38)||(51847855-51847892)
chr1 (6-46)||(34007353-34007393)
chr1 (1-41)||(47165245-47165285)
[»] chr5 (45 HSPs)
chr5 (1-50)||(25935320-25935369)
chr5 (1-44)||(40643936-40643979)
chr5 (1-43)||(2316376-2316418)
chr5 (1-43)||(15374079-15374121)
chr5 (3-44)||(41762247-41762288)
chr5 (1-41)||(22303900-22303940)
chr5 (1-44)||(40090444-40090487)
chr5 (6-44)||(2550325-2550363)
chr5 (1-39)||(2721590-2721628)
chr5 (3-41)||(15804322-15804360)
chr5 (6-44)||(22305109-22305147)
chr5 (1-39)||(28828369-28828407)
chr5 (3-44)||(927299-927340)
chr5 (1-50)||(9764329-9764378)
chr5 (3-44)||(34982213-34982254)
chr5 (1-41)||(9764457-9764497)
chr5 (1-37)||(9894352-9894388)
chr5 (1-41)||(20523133-20523173)
chr5 (1-41)||(22766952-22766992)
chr5 (1-41)||(26281299-26281339)
chr5 (1-41)||(37722924-37722964)
chr5 (1-40)||(3563278-3563317)
chr5 (1-44)||(5658773-5658816)
chr5 (1-40)||(20523252-20523291)
chr5 (6-41)||(33146061-33146096)
chr5 (6-41)||(33146191-33146226)
chr5 (1-40)||(33245402-33245441)
chr5 (1-39)||(15804413-15804451)
chr5 (1-39)||(19533937-19533975)
chr5 (1-43)||(23092081-23092123)
chr5 (1-39)||(37145531-37145569)
chr5 (6-43)||(15270871-15270908)
chr5 (1-44)||(6634012-6634055)
chr5 (1-44)||(16515137-16515180)
chr5 (6-41)||(22302539-22302574)
chr5 (1-44)||(32470879-32470922)
chr5 (6-41)||(34982313-34982348)
chr5 (1-44)||(40809338-40809381)
chr5 (6-40)||(12064485-12064519)
chr5 (1-44)||(13243454-13243499)
chr5 (1-39)||(13243523-13243561)
chr5 (1-43)||(32250128-32250169)
chr5 (1-39)||(32389974-32390012)
chr5 (1-41)||(15373960-15374000)
chr5 (1-41)||(40809460-40809500)
[»] chr7 (37 HSPs)
chr7 (1-49)||(31632714-31632762)
chr7 (1-45)||(43955513-43955557)
chr7 (1-43)||(40110735-40110777)
chr7 (3-44)||(14603283-14603324)
chr7 (1-41)||(26162156-26162196)
chr7 (1-41)||(34398968-34399008)
chr7 (3-43)||(39342663-39342703)
chr7 (1-44)||(2057392-2057435)
chr7 (1-44)||(35776974-35777017)
chr7 (3-41)||(28539189-28539227)
chr7 (3-41)||(35455804-35455842)
chr7 (1-39)||(43955633-43955671)
chr7 (6-43)||(31913234-31913271)
chr7 (1-41)||(6498784-6498824)
chr7 (1-44)||(5644674-5644717)
chr7 (1-44)||(40110857-40110900)
chr7 (6-41)||(40853987-40854022)
chr7 (1-44)||(40854089-40854132)
chr7 (3-41)||(23548632-23548670)
chr7 (1-43)||(29065817-29065859)
chr7 (1-43)||(29639234-29639276)
chr7 (10-44)||(30080811-30080845)
chr7 (6-40)||(30587909-30587943)
chr7 (3-37)||(30629061-30629095)
chr7 (3-40)||(9784952-9784989)
chr7 (1-41)||(2057514-2057554)
chr7 (1-41)||(5644796-5644836)
chr7 (6-41)||(13815000-13815035)
chr7 (10-41)||(31913309-31913340)
chr7 (1-35)||(21636004-21636038)
chr7 (3-37)||(23455268-23455302)
chr7 (5-43)||(25189249-25189287)
chr7 (1-43)||(29195707-29195749)
chr7 (1-41)||(29065938-29065978)
chr7 (1-41)||(34388384-34388424)
chr7 (3-43)||(42816553-42816593)
chr7 (1-45)||(44915191-44915235)
[»] chr2 (39 HSPs)
chr2 (1-45)||(10480115-10480159)
chr2 (1-43)||(14365698-14365740)
chr2 (3-49)||(33189292-33189338)
chr2 (1-42)||(14537198-14537239)
chr2 (3-43)||(769034-769074)
chr2 (3-43)||(11141303-11141343)
chr2 (1-45)||(11684595-11684639)
chr2 (1-41)||(41461634-41461674)
chr2 (3-41)||(1583844-1583882)
chr2 (1-43)||(17180295-17180337)
chr2 (1-43)||(27033488-27033530)
chr2 (1-41)||(14365818-14365858)
chr2 (1-53)||(7228045-7228099)
chr2 (6-41)||(14537305-14537340)
chr2 (6-44)||(3345760-3345798)
chr2 (1-47)||(11716402-11716448)
chr2 (1-39)||(11793897-11793935)
chr2 (6-44)||(19231305-19231343)
chr2 (3-41)||(35047714-35047752)
chr2 (3-44)||(3092279-3092320)
chr2 (6-43)||(11684696-11684733)
chr2 (1-45)||(11716518-11716563)
chr2 (6-39)||(11824786-11824819)
chr2 (1-45)||(784789-784833)
chr2 (1-41)||(784912-784952)
chr2 (1-41)||(13017779-13017819)
chr2 (1-45)||(17905650-17905694)
chr2 (1-33)||(30698289-30698321)
chr2 (6-41)||(8736461-8736496)
chr2 (6-41)||(21504468-21504503)
chr2 (1-39)||(11532286-11532324)
chr2 (6-44)||(11595334-11595372)
chr2 (1-43)||(14954264-14954306)
chr2 (6-44)||(41585710-41585748)
chr2 (6-39)||(11607241-11607274)
chr2 (1-38)||(28740599-28740636)
chr2 (6-39)||(44205678-44205711)
chr2 (3-43)||(39630223-39630263)
chr2 (1-41)||(45094504-45094544)
[»] chr3 (40 HSPs)
chr3 (1-44)||(42005985-42006028)
chr3 (1-44)||(44436255-44436298)
chr3 (1-44)||(49457340-49457383)
chr3 (3-51)||(36398023-36398071)
chr3 (1-41)||(46672835-46672875)
chr3 (1-41)||(47767432-47767472)
chr3 (1-44)||(27252013-27252056)
chr3 (1-44)||(35279934-35279977)
chr3 (1-44)||(44692941-44692984)
chr3 (1-43)||(9129463-9129505)
chr3 (1-43)||(9137570-9137612)
chr3 (1-41)||(37054394-37054434)
chr3 (1-41)||(44692822-44692862)
chr3 (6-41)||(46429414-46429449)
chr3 (1-44)||(53129875-53129918)
chr3 (1-43)||(7302344-7302386)
chr3 (3-44)||(671653-671694)
chr3 (1-42)||(5415782-5415823)
chr3 (6-39)||(27485474-27485507)
chr3 (3-44)||(34088568-34088609)
chr3 (6-43)||(37321622-37321659)
chr3 (6-43)||(54761583-54761620)
chr3 (1-41)||(5415902-5415942)
chr3 (1-37)||(21307564-21307600)
chr3 (1-45)||(46001360-46001404)
chr3 (12-43)||(9007480-9007511)
chr3 (6-41)||(25655315-25655350)
chr3 (1-43)||(9129342-9129384)
chr3 (1-43)||(9137449-9137491)
chr3 (6-44)||(25655403-25655441)
chr3 (6-44)||(28092320-28092358)
chr3 (3-41)||(48947605-48947643)
chr3 (6-43)||(332081-332118)
chr3 (6-43)||(2104750-2104787)
chr3 (4-41)||(28092214-28092251)
chr3 (1-38)||(52527039-52527076)
chr3 (1-41)||(2732639-2732679)
chr3 (1-33)||(19475824-19475856)
chr3 (1-41)||(30767104-30767144)
chr3 (1-41)||(46429515-46429555)
[»] chr6 (19 HSPs)
chr6 (8-49)||(1195343-1195384)
chr6 (1-50)||(28918156-28918205)
chr6 (1-41)||(9285647-9285687)
chr6 (1-41)||(33733432-33733472)
chr6 (1-44)||(6919826-6919869)
chr6 (1-41)||(34245013-34245053)
chr6 (6-45)||(8475175-8475214)
chr6 (1-44)||(8574784-8574827)
chr6 (3-41)||(13487275-13487313)
chr6 (1-45)||(776199-776243)
chr6 (1-41)||(1368477-1368517)
chr6 (1-41)||(8574695-8574735)
chr6 (1-41)||(29889467-29889507)
chr6 (1-39)||(6919710-6919748)
chr6 (6-44)||(9285753-9285791)
chr6 (1-39)||(9763014-9763052)
chr6 (1-43)||(9763131-9763173)
chr6 (1-41)||(776080-776120)
chr6 (1-37)||(15299544-15299579)
[»] chr4 (39 HSPs)
chr4 (1-50)||(1112596-1112645)
chr4 (1-41)||(31473849-31473889)
chr4 (1-41)||(49111431-49111471)
chr4 (1-44)||(7352931-7352974)
chr4 (1-44)||(36456045-36456088)
chr4 (1-39)||(7352814-7352852)
chr4 (1-38)||(10633035-10633072)
chr4 (1-42)||(31742883-31742924)
chr4 (1-41)||(857358-857398)
chr4 (1-41)||(14982280-14982320)
chr4 (1-41)||(15660302-15660342)
chr4 (1-41)||(16516171-16516211)
chr4 (1-41)||(36455907-36455947)
chr4 (1-40)||(4441338-4441377)
chr4 (6-41)||(26251015-26251050)
chr4 (3-41)||(2125857-2125895)
chr4 (1-43)||(41498609-41498651)
chr4 (1-39)||(42542986-42543024)
chr4 (1-43)||(42844541-42844583)
chr4 (6-43)||(14982385-14982422)
chr4 (6-39)||(42775625-42775658)
chr4 (1-41)||(4896648-4896688)
chr4 (1-41)||(10128093-10128133)
chr4 (1-41)||(11348356-11348396)
chr4 (1-41)||(28845990-28846030)
chr4 (1-44)||(4896751-4896794)
chr4 (1-44)||(15660180-15660223)
chr4 (1-36)||(28845876-28845911)
chr4 (6-41)||(47108318-47108353)
chr4 (6-41)||(53760810-53760845)
chr4 (10-40)||(4441438-4441468)
chr4 (6-43)||(21012596-21012633)
chr4 (6-43)||(31947588-31947625)
chr4 (6-39)||(46243115-46243148)
chr4 (6-39)||(52295065-52295098)
chr4 (1-41)||(1107171-1107211)
chr4 (1-33)||(1539649-1539681)
chr4 (1-41)||(5715744-5715784)
chr4 (1-41)||(11040968-11041007)
[»] chr8 (40 HSPs)
chr8 (1-41)||(3853616-3853656)
chr8 (1-41)||(3858074-3858114)
chr8 (1-45)||(17110865-17110909)
chr8 (1-44)||(36103098-36103141)
chr8 (6-44)||(14799976-14800014)
chr8 (1-43)||(14991690-14991732)
chr8 (1-43)||(27322692-27322734)
chr8 (3-41)||(29257396-29257434)
chr8 (6-44)||(33377345-33377383)
chr8 (1-43)||(42711399-42711441)
chr8 (1-41)||(24044960-24045000)
chr8 (1-41)||(28324705-28324745)
chr8 (1-41)||(33902667-33902707)
chr8 (6-41)||(29611388-29611423)
chr8 (1-44)||(32626077-32626120)
chr8 (6-41)||(34008799-34008834)
chr8 (1-44)||(40046801-40046844)
chr8 (1-43)||(23011732-23011774)
chr8 (6-44)||(30444963-30445001)
chr8 (3-37)||(44346723-44346757)
chr8 (1-38)||(35979047-35979084)
chr8 (6-43)||(42739947-42739984)
chr8 (1-41)||(515575-515615)
chr8 (1-41)||(14800079-14800119)
chr8 (1-41)||(17110988-17111028)
chr8 (7-39)||(29482856-29482888)
chr8 (1-41)||(44889354-44889394)
chr8 (1-44)||(14236-14278)
chr8 (6-41)||(7202934-7202969)
chr8 (6-41)||(30435350-30435385)
chr8 (1-44)||(33986001-33986044)
chr8 (1-39)||(4156286-4156324)
chr8 (6-43)||(7202863-7202900)
chr8 (11-40)||(34388527-34388556)
chr8 (3-43)||(1088322-1088362)
chr8 (6-42)||(8469514-8469550)
chr8 (6-38)||(26520469-26520501)
chr8 (1-37)||(30435250-30435286)
chr8 (4-44)||(33902789-33902828)
chr8 (1-41)||(37268126-37268166)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-39)||(524-562)
scaffold1562 (7-44)||(402-439)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-39)||(2031-2069)
scaffold1158 (7-44)||(2154-2191)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-43)||(42097-42139)
scaffold0009 (1-41)||(41997-42037)
[»] scaffold0240 (1 HSPs)
scaffold0240 (6-41)||(17605-17640)
[»] scaffold0039 (1 HSPs)
scaffold0039 (6-41)||(109049-109084)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-39)||(82945-82983)
[»] scaffold0301 (1 HSPs)
scaffold0301 (3-39)||(7153-7189)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-40)||(4531-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-40)||(5175-5214)
[»] scaffold0129 (2 HSPs)
scaffold0129 (1-44)||(19195-19238)
scaffold0129 (1-39)||(19818-19855)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-43)||(15897-15938)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-43)||(2939-2980)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-41)||(2867-2907)


Alignment Details
Target: chr1 (Bit Score: 406; Significance: 0; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 40 - 461
Target Start/End: Complemental strand, 8014614 - 8014193
Alignment:
Q  40 cttagtattttacattatctgcccaagaaagtacatattaacctcaatcactaagtttaaaatgtctgtttccttgacactctcttgttcccttcagctt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8014614 cttagtattttacattatctgcccaagaaagtacatattaacctcaatcactaagtttaaaatgtctgtttccttgacactcacttgttcccttcagctt 8014515  T
Q  140 gaatccaatctaagtgaaagaaaaacagttctagaggtttgtgatacaattgtaaagcgaggcggtagcttggctggtgcaggaattgtcggaattctgc 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  8014514 gaatccaatctaagtgaaagaaaaacagttctagaggtttgtgatacaattgtaaagcgaggcggtagcttagctggtgcaggaattgtcgggattctgc 8014415  T
Q  240 aaaaaatggaagaggactcaaaaggtcttatctttggaaagagaagcgttgttgccattgatgggggtttgtatgaaaattatcctcaatacaggactta 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8014414 aaaaaatggaagaggactcaaaaggtcttatctttggaaagagaagcgttgttgccattgatgggggtttgtatgaaaattatcctcaatacaggactta 8014315  T
Q  340 cttgcaacattcagtaaaggaactattaggaacagaaaagtcaaacaatgttgttatagaacattcaaaagatggttctggtattggaggtgctctattg 439  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8014314 cttgcaacattcagtaaaggagctattaggaacagaaaagtcaaacaatgttgttatagaacattcaaaagatggttctggtattggaggtgctctattg 8014215  T
Q  440 gcagcttcaaattccatgtatt 461  Q
    ||||||||||||||||||||||    
T  8014214 gcagcttcaaattccatgtatt 8014193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23536107 - 23536065
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23536107 attacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15034778 - 15034818
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15034778 attacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24273253 - 24273293
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24273253 attacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30190255 - 30190295
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30190255 attacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5474457 - 5474414
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactcttag 5474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8224808 - 8224765
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8224808 attacattccctcaaaacattccctcatccaaacacactcttag 8224765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43623011 - 43623054
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  43623011 attacattccatcaaaacattcccccatccaaacacactcttag 43623054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4038115 - 4038073
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  4038115 attacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15034699 - 15034657
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  15034699 attacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 15245495 - 15245457
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactcttag 15245457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26501112 - 26501154
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26501112 attacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27804305 - 27804269
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacaca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  27804305 attacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34756467 - 34756427
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  34756467 attacattccctcaaaacattcccccatccaaacactctct 34756427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 32572975 - 32572940
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  32572975 attccctcaaaacattcccccatccaaacacactct 32572940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27804384 - 27804426
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  27804384 attacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 41823180 - 41823218
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  41823180 attccttcaaaacattcccccatccaaacacactcttag 41823218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 50471803 - 50471765
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  50471803 attccctcaaaactttcccccatccaaacacactcttag 50471765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32287966 - 32288007
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctt 42  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  32287966 attacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 40264083 - 40264046
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||| |||||||||||||||||    
T  40264083 attccctcaaaacattcccctatccaaacacactctta 40264046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45565434 - 45565397
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacac 38  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  45565434 attacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4038194 - 4038234
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  4038194 attactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6470719 - 6470759
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  6470719 attacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44410351 - 44410311
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  44410351 attacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49659256 - 49659213
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  49659256 attacattccctcaatacattcccc-atccaaacacactcttagt 49659213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 23536173 - 23536204
Alignment:
Q  6 attccctcaaaacattcccccatccaaacaca 37  Q
    ||||||||||||||||||||||||||||||||    
T  23536173 attccctcaaaacattcccccatccaaacaca 23536204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27935604 - 27935647
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||    
T  27935604 attacattccctcaaaatatttctccatccaaacacactcttag 27935647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28632618 - 28632661
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||    
T  28632618 attacattccctccaaacattccctcatccaaacacactattag 28632661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29446790 - 29446747
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||| ||||||||||||||| | |||||||||||||||    
T  29446790 attacattccttcaaaacattcccccgttcaaacacactcttag 29446747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 32128083 - 32128048
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||| |||||||||||    
T  32128083 attccctcaaaacattcccccatctaaacacactct 32128048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 37214924 - 37214959
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37214924 attccctcaaaacattctcccatccaaacacactct 37214959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38277455 - 38277412
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||| |||| | |||||||||||||||||||    
T  38277455 attacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 44410431 - 44410474
Alignment:
Q  2 ttacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||    
T  44410431 ttacattacctcaaaatattccccaatccaaacacactcttagt 44410474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 48953622 - 48953587
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||| ||||||||||||||||||||||||||||||    
T  48953622 attccttcaaaacattcccccatccaaacacactct 48953587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28745837 - 28745799
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  28745837 attacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31166350 - 31166308
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||  |||||||||||||| ||||||||||||||||||    
T  31166350 attacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 34007441 - 34007479
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  34007441 attccctcaaaatatttccccatccaaacacactcttag 34007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40264149 - 40264187
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  40264149 attacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 45565500 - 45565538
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  45565500 attccctcaaaacattcttccatccaaacacactcttag 45565538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37036982 - 37037019
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacac 38  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  37036982 attacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51847892 - 51847855
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacac 38  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  51847892 attacattacctcaaaacattcctccatccaaacacac 51847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 34007393 - 34007353
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttagta 46  Q
    |||||||||||| ||| ||||||||||||||||||| ||||    
T  34007393 attccctcaaaatatttccccatccaaacacactctaagta 34007353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47165245 - 47165285
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||| |||||||||||| | |||||||||||||||||    
T  47165245 attacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25935320 - 25935369
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagtatttt 50  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25935320 attacattccctcaaaacattcccccatccaaacacactcttagaatttt 25935369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40643936 - 40643979
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40643936 attacattccctcaaaacattcccccatccaaacacactcttag 40643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2316418 - 2316376
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2316418 attacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15374079 - 15374121
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15374079 attacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 41762247 - 41762288
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41762247 tacattccctcaaaacattcccccatccaaacacactcttag 41762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22303900 - 22303940
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22303900 attacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40090444 - 40090487
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  40090444 attacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 2550363 - 2550325
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2550363 attccctcaaaacattcccccatccaaacacactcttag 2550325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2721590 - 2721628
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2721590 attacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 15804360 - 15804322
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15804360 tacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 22305147 - 22305109
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttag 22305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28828407 - 28828369
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28828407 attacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 927340 - 927299
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  927340 tacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9764378 - 9764329
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagtatttt 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  9764378 attactttccctcaaaatattcccccatccaaacacactcttagtctttt 9764329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 34982254 - 34982213
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  34982254 tacattccctcaaaacattcccctatccaaacacactcttag 34982213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9764457 - 9764497
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  9764457 attacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9894352 - 9894388
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacaca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  9894352 attacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20523173 - 20523133
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  20523173 attacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22766992 - 22766952
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  22766992 attatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26281299 - 26281339
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  26281299 attacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37722924 - 37722964
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  37722924 attacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3563317 - 3563278
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactc 40  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  3563317 attacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5658816 - 5658773
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  5658816 attacattccctcaaaacatttctccatccaaacacactcttag 5658773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20523252 - 20523291
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactc 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  20523252 attacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 33146096 - 33146061
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  33146096 attccctcaaaacattcccccatccaaacacactct 33146061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 33146226 - 33146191
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  33146226 attccctcaaaacattcccccatccaaacacactct 33146191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33245402 - 33245441
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactc 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  33245402 attacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15804413 - 15804451
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  15804413 attacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19533937 - 19533975
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  19533937 attacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23092081 - 23092123
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  23092081 attacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37145531 - 37145569
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  37145531 attacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 15270871 - 15270908
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15270871 attccctcaaaacattcctccatccaaacacactctta 15270908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6634055 - 6634012
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||| |||||||| || |||||||||||||||||||||||    
T  6634055 attacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16515137 - 16515180
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||| ||||||||| | |||||||||||||||||||    
T  16515137 attacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 22302574 - 22302539
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||| |||||||||||||||||||    
T  22302574 attccctcaaaacattaccccatccaaacacactct 22302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32470922 - 32470879
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||    
T  32470922 attacattccctcaaaacatttctccatccaaatacactcttag 32470879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 34982313 - 34982348
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  34982313 attccctcaaaacattcctccatccaaacacactct 34982348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40809381 - 40809338
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||    
T  40809381 attatattctctcaaaacatttccccatccaaacacactcttag 40809338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 12064485 - 12064519
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactc 40  Q
    |||||||||||||||||||||||| ||||||||||    
T  12064485 attccctcaaaacattcccccatcaaaacacactc 12064519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13243499 - 13243454
Alignment:
Q  1 attacattccctcaaaacattcccccatc--caaacacactcttag 44  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||    
T  13243499 attacattccctcaaaacattccctcatccacaaacacactcttag 13243454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13243523 - 13243561
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  13243523 attacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32250128 - 32250169
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  32250128 attactttccctcaaaacatt-ccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32390012 - 32389974
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  32390012 attacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15374000 - 15373960
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||| ||||  |||||||||||||||||    
T  15374000 attacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40809460 - 40809500
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||| ||||||||||| ||||||| |||||||||||    
T  40809460 attacattctctcaaaacatttccccatctaaacacactct 40809500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31632762 - 31632714
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagtattt 49  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31632762 attacattccctcaaaacattcccccatccaaacacactcttagaattt 31632714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43955557 - 43955513
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43955557 attacattccctcaaaacattcccccatccaaacacactcttagt 43955513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40110777 - 40110735
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40110777 attacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 14603283 - 14603324
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14603283 tacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26162156 - 26162196
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26162156 attacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34398968 - 34399008
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34398968 attacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 39342663 - 39342703
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39342663 tacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2057435 - 2057392
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  2057435 attacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35776974 - 35777017
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  35776974 attacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 28539189 - 28539227
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28539189 tacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 35455842 - 35455804
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35455842 tacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43955633 - 43955671
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43955633 attacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 31913271 - 31913234
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactctta 31913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6498784 - 6498824
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  6498784 attacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5644717 - 5644674
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  5644717 attacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40110857 - 40110900
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  40110857 attacattccctcgaaacatttccccatccaaacacactcttag 40110900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 40854022 - 40853987
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  40854022 attccctcaaaacattcccccatccaaacacactct 40853987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40854089 - 40854132
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  40854089 attacattccctcagaacatttccccatccaaacacactcttag 40854132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 23548632 - 23548670
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  23548632 tacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29065859 - 29065817
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  29065859 attacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29639234 - 29639276
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  29639234 attacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 30080811 - 30080845
Alignment:
Q  10 cctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||||||    
T  30080811 cctcaaaacattcccccatccaaacacactcttag 30080845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 30587909 - 30587943
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactc 40  Q
    |||||||||||||||||||||||||||||||||||    
T  30587909 attccctcaaaacattcccccatccaaacacactc 30587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 30629095 - 30629061
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacaca 37  Q
    |||||||||||||||||||||||||||||||||||    
T  30629095 tacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9784952 - 9784989
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactc 40  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9784952 tacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2057514 - 2057554
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  2057514 attactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5644796 - 5644836
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  5644796 attacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 13815000 - 13815035
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||| |||||||||||||||    
T  13815000 attccctcaaaacattcccctatccaaacacactct 13815035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 41
Target Start/End: Original strand, 31913309 - 31913340
Alignment:
Q  10 cctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||    
T  31913309 cctcaaaacattcccccatccaaacacactct 31913340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21636004 - 21636038
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaaca 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  21636004 attacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 23455268 - 23455302
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacaca 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  23455268 tacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 25189249 - 25189287
Alignment:
Q  5 cattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  25189249 cattacctcaaaacattcccacatccaaacacactctta 25189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29195749 - 29195707
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||| |||||||| ||||| |||||||||||||||||||    
T  29195749 attacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29065938 - 29065978
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||| ||| |||||||||| |||||||||||||||||    
T  29065938 attacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34388384 - 34388424
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  34388384 attacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 42816593 - 42816553
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  42816593 tacattccctcaaaacattctccaattcaaacacactctta 42816553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44915235 - 44915191
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    ||||| ||||||||||| |||| | ||||||||||||||||||||    
T  44915235 attacgttccctcaaaaaattctctcatccaaacacactcttagt 44915191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10480159 - 10480115
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10480159 attacattccctcaaaacattcccccatccaaacacactcttagt 10480115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14365740 - 14365698
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14365740 attacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 33189292 - 33189338
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttagtattt 49  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  33189292 tacattccctcaaaacattcccccatccaaacacactcttagaattt 33189338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14537239 - 14537198
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14537239 attacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 769074 - 769034
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  769074 tacattccctcaaaacattcccccatccaaacacactctta 769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 11141343 - 11141303
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11141343 tacattccctcaaaacattcccccatccaaacacactctta 11141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11684639 - 11684595
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11684639 attacattccctcaaaacattcccccatccaaacacattcttagt 11684595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41461634 - 41461674
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41461634 attacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 1583844 - 1583882
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1583844 tacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17180337 - 17180295
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  17180337 attacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27033530 - 27033488
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  27033530 attacattctctcaaaacattcccccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14365818 - 14365858
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  14365818 attacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7228045 - 7228099
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta--gtattttaca 53  Q
    ||||||||| ||||||||||| |||||||||||||||||||||  ||||||||||    
T  7228045 attacattctctcaaaacatttccccatccaaacacactcttaaggtattttaca 7228099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 14537305 - 14537340
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  14537305 attccctcaaaacattcccccatccaaacacactct 14537340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 3345798 - 3345760
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  3345798 attccctcaaaacattcccccatccaaacacacttttag 3345760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11716448 - 11716402
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagtat 47  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||    
T  11716448 attacattccctcaaaacattcttccatccaaacacactctaagtat 11716402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11793935 - 11793897
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  11793935 attacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 19231305 - 19231343
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  19231305 attccctcaaaacattcccccatccaaacacaatcttag 19231343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 35047714 - 35047752
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  35047714 tacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 3092320 - 3092279
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||| ||||||||| ||||||||||    
T  3092320 tacattccctcaaaacattcctccatccaaatacactcttag 3092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 11684696 - 11684733
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11684696 attccctcaaaacattcctccatccaaacacactctta 11684733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11716518 - 11716563
Alignment:
Q  1 attacattccctcaaaacattcccccatcc-aaacacactcttagt 45  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||    
T  11716518 attacattccctcaaaacattcccccatccaaaacacattcttagt 11716563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 11824786 - 11824819
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||||||||||||||||    
T  11824786 attccctcaaaacattcccccatccaaacacact 11824819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 784833 - 784789
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  784833 attacattccctcaaaacatttttccatccaaacacactcttagt 784789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 784912 - 784952
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  784912 attacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13017819 - 13017779
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  13017819 attacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17905694 - 17905650
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||    
T  17905694 attacattctctcaaaacattccctcatcctaacacactcttagt 17905650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30698321 - 30698289
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  30698321 attacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 8736461 - 8736496
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8736461 attccctcaaaacattccctcatccaaacacactct 8736496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 21504503 - 21504468
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||| |||||||||||||||    
T  21504503 attccctcaaaacattccccgatccaaacacactct 21504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11532286 - 11532324
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  11532286 attacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 11595372 - 11595334
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  11595372 attccctcaaaacattaccccatccaaacacactattag 11595334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14954306 - 14954264
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||| ||||||||||||| | |||||||||||||||||    
T  14954306 attacattcactcaaaacattcctctatccaaacacactctta 14954264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 41585710 - 41585748
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  41585710 attccctcaaaacatttcaccatccaaacacactcttag 41585748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 11607274 - 11607241
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||| |||||||||||||||||    
T  11607274 attccctcaaaacattaccccatccaaacacact 11607241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28740636 - 28740599
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacac 38  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  28740636 attacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 44205678 - 44205711
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||| |||||||||||||||||    
T  44205678 attccctcaaaacatttccccatccaaacacact 44205711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 39630263 - 39630223
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||| | |||| ||||||||||||||    
T  39630263 tacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45094504 - 45094544
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  45094504 attatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42005985 - 42006028
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42005985 attacattccctcaaaacattcccccatccaaacacactcttag 42006028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44436298 - 44436255
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44436298 attacattccctcaaaacattcccccatccaaacacactcttag 44436255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49457383 - 49457340
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  49457383 attacattccctcaaaacattcccccatccaaacacactcttag 49457340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 36398023 - 36398071
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttagtatttta 51  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  36398023 tacattccctcaaaacattcccccatccaaacacactctaagtttttta 36398071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46672835 - 46672875
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46672835 attacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47767472 - 47767432
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  47767472 attacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27252013 - 27252056
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  27252013 attacattccctcaaaacatccccccatccaaacacactcttag 27252056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35279934 - 35279977
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  35279934 attacattccctcaaaacattcccccatccaaacacattcttag 35279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44692941 - 44692984
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  44692941 attacattccctcaaaacattcctccatccaaacacactcttag 44692984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9129463 - 9129505
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  9129463 attacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9137570 - 9137612
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  9137570 attacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37054434 - 37054394
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  37054434 attacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44692862 - 44692822
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  44692862 attactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 46429449 - 46429414
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  46429449 attccctcaaaacattcccccatccaaacacactct 46429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53129875 - 53129918
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  53129875 attacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7302386 - 7302344
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  7302386 attacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 671653 - 671694
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  671653 tacattccctcaaaacattcccctatccaaaaacactcttag 671694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5415823 - 5415782
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctt 42  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  5415823 attacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 27485507 - 27485474
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||||||||||||||||    
T  27485507 attccctcaaaacattcccccatccaaacacact 27485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 34088609 - 34088568
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  34088609 tacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 37321622 - 37321659
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37321622 attccctcaaaacattccccaatccaaacacactctta 37321659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 54761583 - 54761620
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||| |||||||||||||||||||    
T  54761583 attccctcaaaacattcctccatccaaacacactctta 54761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5415902 - 5415942
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  5415902 attactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21307564 - 21307600
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacaca 37  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21307564 attacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46001404 - 46001360
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||    
T  46001404 attacattacctcaaaatattccgccatccaaacacactcttagt 46001360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 43
Target Start/End: Original strand, 9007480 - 9007511
Alignment:
Q  12 tcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||||||||||||    
T  9007480 tcaaaacattcccccatccaaacacactctta 9007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 25655350 - 25655315
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||| |||||||||||||||||||    
T  25655350 attccctcaaaacatttccccatccaaacacactct 25655315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9129384 - 9129342
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||| | || ||||||||||||||||||||    
T  9129384 attacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9137491 - 9137449
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||| | || ||||||||||||||||||||    
T  9137491 attacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 25655403 - 25655441
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  25655403 attccgtcaaaacatttccccatccaaacacactcttag 25655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 28092320 - 28092358
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  28092320 attccctcaaaacattcccccatttaaacacactcttag 28092358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 48947643 - 48947605
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  48947643 tacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 332081 - 332118
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||  |||||||||||||||||||    
T  332081 attccctcaaaacattcttccatccaaacacactctta 332118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 2104787 - 2104750
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  2104787 attccctcgaaacattcccctatccaaacacactctta 2104750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 28092251 - 28092214
Alignment:
Q  4 acattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  28092251 acatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 52527076 - 52527039
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacac 38  Q
    ||||||| || |||||||||||||||||||||||||||    
T  52527076 attacatcccttcaaaacattcccccatccaaacacac 52527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2732679 - 2732639
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  2732679 attatattacctcaaaacatttccccatccaaacacactct 2732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19475856 - 19475824
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaa 33  Q
    ||||||||||||||||||||||| |||||||||    
T  19475856 attacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30767144 - 30767104
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| |||||||||||||||| ||||||||||| |||||||    
T  30767144 attagattccctcaaaacattaccccatccaaatacactct 30767104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46429515 - 46429555
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||| |||||||| |||||| ||||||||||||||||    
T  46429515 attacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 1195384 - 1195343
Alignment:
Q  8 tccctcaaaacattcccccatccaaacacactcttagtattt 49  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1195384 tccctcaaaacattcccccatccaaacacactcttagtattt 1195343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28918205 - 28918156
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagtatttt 50  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  28918205 attacattccctcaaaacattcctccatccaaacacactcttagtttttt 28918156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9285687 - 9285647
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9285687 attacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6919826 - 6919869
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  6919826 attactttccctcaaaacattcccccatccaaacacactcttag 6919869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34245013 - 34245053
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  34245013 attacattccctcaaaacattcctccatccaaacacactct 34245053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 8475214 - 8475175
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttagt 45  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8475214 attccctcaaaacatttccccatccaaacacactcttagt 8475175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8574784 - 8574827
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  8574784 attacattcactcaaaacatttccccatccaaacacactcttag 8574827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 13487313 - 13487275
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  13487313 tacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 776199 - 776243
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    |||||||||||||||||||||  || |||||||||||||||||||    
T  776199 attacattccctcaaaacattttcctatccaaacacactcttagt 776243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1368517 - 1368477
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  1368517 attacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8574735 - 8574695
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  8574735 attacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29889467 - 29889507
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  29889467 attacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6919748 - 6919710
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  6919748 attacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 9285753 - 9285791
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  9285753 attccctcaaaacattccctcatctaaacacactcttag 9285791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9763052 - 9763014
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9763052 attacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9763131 - 9763173
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||| |||||||| ||||| |||||||||||||||||||    
T  9763131 attacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 776120 - 776080
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  776120 attacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15299544 - 15299579
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacaca 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15299544 attacattccctcaaaacatt-ccccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1112645 - 1112596
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagtatttt 50  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  1112645 attacatttcctcaaaacattcccccatccaaacacactcttaggatttt 1112596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31473889 - 31473849
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31473889 attacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49111431 - 49111471
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49111431 attacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7352931 - 7352974
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  7352931 attacattccctcaaaacatttccccatccaaacacactcttag 7352974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36456045 - 36456088
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  36456045 attacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7352852 - 7352814
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7352852 attacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10633072 - 10633035
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10633072 attacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31742883 - 31742924
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctt 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  31742883 attacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 857358 - 857398
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  857358 attacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14982320 - 14982280
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  14982320 attacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15660302 - 15660342
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  15660302 attacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16516211 - 16516171
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  16516211 attacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36455947 - 36455907
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  36455947 attagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4441377 - 4441338
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactc 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  4441377 attacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 26251015 - 26251050
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  26251015 attccctcaaaacattcccccatccaaacacactct 26251050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 2125895 - 2125857
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2125895 tacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41498609 - 41498651
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  41498609 attacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42542986 - 42543024
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42542986 attacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42844583 - 42844541
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  42844583 attacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 14982385 - 14982422
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||| |||||||||||||||||||||||||    
T  14982385 attccctcaaaagattcccccatccaaacacactctta 14982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 42775658 - 42775625
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||||||||||||||||    
T  42775658 attccctcaaaacattcccccatccaaacacact 42775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4896688 - 4896648
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  4896688 attacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10128093 - 10128133
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  10128093 attacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11348356 - 11348396
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  11348356 attacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28845990 - 28846030
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  28845990 attatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4896751 - 4896794
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||    
T  4896751 attacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15660223 - 15660180
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||    
T  15660223 attacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 28845911 - 28845876
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacac 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  28845911 attacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 47108353 - 47108318
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||| ||||||||||||||||    
T  47108353 attccctcaaaacattccctcatccaaacacactct 47108318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 53760810 - 53760845
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| ||||||||||||    
T  53760810 attccctcaaaacattcccccattcaaacacactct 53760845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 4441438 - 4441468
Alignment:
Q  10 cctcaaaacattcccccatccaaacacactc 40  Q
    |||||||||||||||||||||||||||||||    
T  4441438 cctcaaaacattcccccatccaaacacactc 4441468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 21012596 - 21012633
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||  |||||||||||||||||||    
T  21012596 attccctcaaaacattcgtccatccaaacacactctta 21012633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 31947625 - 31947588
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  31947625 attccctcaaaacattctcccatccaaacatactctta 31947588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 46243115 - 46243148
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacact 39  Q
    |||| |||||||||||||||||||||||||||||    
T  46243115 attctctcaaaacattcccccatccaaacacact 46243148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 52295065 - 52295098
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacact 39  Q
    |||||||| |||||||||||||||||||||||||    
T  52295065 attccctcgaaacattcccccatccaaacacact 52295098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1107171 - 1107211
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  1107171 attatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1539681 - 1539649
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaa 33  Q
    ||||||||||||||||||||||| |||||||||    
T  1539681 attacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5715784 - 5715744
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||  |||||||||||||| ||||||||||||||||    
T  5715784 attacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11041007 - 11040968
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  11041007 attacattccctcaaaatatt-ccccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3853656 - 3853616
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3853656 attacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3858114 - 3858074
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3858114 attacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17110909 - 17110865
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttagt 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  17110909 attacattccctcaaaacatttccccatccaaacacactcttagt 17110865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36103141 - 36103098
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  36103141 attacattccctcaaaacattcctccatccaaacacactcttag 36103098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 14800014 - 14799976
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactcttag 14799976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14991732 - 14991690
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  14991732 attacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27322692 - 27322734
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  27322692 attacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 29257396 - 29257434
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29257396 tacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 33377345 - 33377383
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33377345 attccctcaaaacattcccccatccaaacacactcttag 33377383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42711399 - 42711441
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  42711399 attacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24045000 - 24044960
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  24045000 attacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28324705 - 28324745
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  28324705 attacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33902707 - 33902667
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  33902707 attacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 29611423 - 29611388
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  29611423 attccctcaaaacattcccccatccaaacacactct 29611388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32626077 - 32626120
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  32626077 attacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 34008834 - 34008799
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  34008834 attccctcaaaacattcccccatccaaacacactct 34008799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40046844 - 40046801
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  40046844 attacattccctcaaaacattcatccatccaaacacactcttag 40046801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23011774 - 23011732
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  23011774 attacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 30444963 - 30445001
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  30444963 attccctcaaaacattcctccatccaaacacactcttag 30445001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 44346723 - 44346757
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacaca 37  Q
    |||||||||||||||||||||||||||||||||||    
T  44346723 tacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35979047 - 35979084
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacac 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  35979047 attacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 42739984 - 42739947
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42739984 attccctcaaaacattcctccatccaaacacactctta 42739947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 515575 - 515615
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  515575 attacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14800079 - 14800119
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  14800079 attactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17110988 - 17111028
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  17110988 attacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 29482856 - 29482888
Alignment:
Q  7 ttccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||    
T  29482856 ttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44889394 - 44889354
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  44889394 attatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14278 - 14236
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    
T  14278 attacattccctccaaacattcccc-atccaaacacactcttag 14236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 7202934 - 7202969
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  7202934 attccctcaaaacattcctccatccaaacacactct 7202969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 30435350 - 30435385
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||||||||||| |||||||||||||||||||    
T  30435350 attccctcaaaacatttccccatccaaacacactct 30435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33986044 - 33986001
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    |||||||| | |||| ||||||||||||||||||||||||||||    
T  33986044 attacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4156286 - 4156324
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  4156286 attacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 7202900 - 7202863
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||  |||||||||||||||||||    
T  7202900 attccctcaaaacattcatccatccaaacacactctta 7202863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 40
Target Start/End: Complemental strand, 34388556 - 34388527
Alignment:
Q  11 ctcaaaacattcccccatccaaacacactc 40  Q
    ||||||||||||||||||||||||||||||    
T  34388556 ctcaaaacattcccccatccaaacacactc 34388527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1088322 - 1088362
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||| ||||||||||||| ||| |||||||||||||||    
T  1088322 tacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 8469550 - 8469514
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactctt 42  Q
    ||||||||||||||||||| | |||||||||||||||    
T  8469550 attccctcaaaacattccctcgtccaaacacactctt 8469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 26520469 - 26520501
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacac 38  Q
    ||||||||||||||||||| |||||||||||||    
T  26520469 attccctcaaaacattccctcatccaaacacac 26520501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30435286 - 30435250
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacaca 37  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30435286 attacattccctcaaaacatttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 33902789 - 33902828
Alignment:
Q  4 acattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  33902789 acattccctcaaa-cattcccccatcccaacacactcttag 33902828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37268126 - 37268166
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    |||||||| |||||||| ||||||| |||||||||||||||    
T  37268126 attacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 524 - 562
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  524 attacattccctcaaaacattcccccatccaaacacact 562  T

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Target: scaffold1562; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 439 - 402
Alignment:
Q  7 ttccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  439 ttccctcaaaatattcccccatccaaacacactcttag 402  T

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Target: scaffold1158 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2069 - 2031
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2069 attacattccctcaaaacattcccccatccaaacacact 2031  T

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Target: scaffold1158; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 2154 - 2191
Alignment:
Q  7 ttccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  2154 ttccctcaaaatattcccccatccaaacacactcttag 2191  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42097 - 42139
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  42097 attacattccctcaaaacgttcccccatccaaacacactctta 42139  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42037 - 41997
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  42037 attacattccctcaaaacattcctccattcaaacacactct 41997  T

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Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 17605 - 17640
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  17605 attccctcaaaacattcccccatccaaacacactct 17640  T

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Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 109084 - 109049
Alignment:
Q  6 attccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  109084 attccctcaaaacattcccccatccaaacacactct 109049  T

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Target: scaffold0048 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 82983 - 82945
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  82983 attacattccctcaaaacattcacccatccaaacacact 82945  T

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Target: scaffold0301 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 7189 - 7153
Alignment:
Q  3 tacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7189 tacattccctcaaaacattcctccatccaaacacact 7153  T

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Target: scaffold0400 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4531 - 4570
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactc 40  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  4531 attatattccctcaaaacattccctcatccaaacacactc 4570  T

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Target: scaffold0365 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5175 - 5214
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactc 40  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  5175 attatattccctcaaaacattccctcatccaaacacactc 5214  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19238 - 19195
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactcttag 44  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||    
T  19238 attacattccctcaaaatactcccccatccaaacacacttttag 19195  T

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Target: scaffold0129; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19818 - 19855
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacact 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19818 attacattccctcaaaaca-tcccccatccaaacacact 19855  T

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Target: scaffold0337 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15897 - 15938
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  15897 attacattccc-caaaacaatcccccatccaaacacactctta 15938  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2939 - 2980
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactctta 43  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  2939 attacattccc-caaaacaatcccccatccaaacacactctta 2980  T

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Target: scaffold0318 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2907 - 2867
Alignment:
Q  1 attacattccctcaaaacattcccccatccaaacacactct 41  Q
    ||||||||| ||| ||||||||||||||| |||||||||||    
T  2907 attacattctctcgaaacattcccccatctaaacacactct 2867  T

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