View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1420_low_19 (Length: 381)

Name: NF1420_low_19
Description: NF1420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1420_low_19
NF1420_low_19
[»] chr1 (60 HSPs)
chr1 (32-380)||(4672938-4673290)
chr1 (290-381)||(24190575-24190667)
chr1 (290-380)||(15959604-15959694)
chr1 (296-380)||(39555555-39555640)
chr1 (313-381)||(6786944-6787012)
chr1 (290-380)||(28016709-28016800)
chr1 (314-381)||(33369656-33369723)
chr1 (313-379)||(13136541-13136607)
chr1 (290-380)||(32623970-32624059)
chr1 (297-381)||(11241133-11241218)
chr1 (297-381)||(32983142-32983227)
chr1 (316-381)||(52985039-52985104)
chr1 (313-381)||(2126144-2126212)
chr1 (297-380)||(40718785-40718866)
chr1 (296-379)||(32742173-32742255)
chr1 (313-379)||(6785564-6785629)
chr1 (313-381)||(42965803-42965871)
chr1 (314-381)||(44148824-44148891)
chr1 (313-380)||(45226245-45226312)
chr1 (313-380)||(46543089-46543156)
chr1 (314-379)||(24728614-24728680)
chr1 (314-380)||(35691500-35691565)
chr1 (313-375)||(39932559-39932621)
chr1 (290-381)||(7467925-7468018)
chr1 (290-375)||(28120717-28120804)
chr1 (314-381)||(3076401-3076468)
chr1 (313-375)||(3875006-3875068)
chr1 (290-380)||(43667267-43667357)
chr1 (297-378)||(50012687-50012769)
chr1 (315-380)||(7875929-7875994)
chr1 (290-365)||(37192679-37192757)
chr1 (290-366)||(1820536-1820613)
chr1 (285-379)||(30221833-30221930)
chr1 (317-375)||(33431671-33431729)
chr1 (327-380)||(12448969-12449021)
chr1 (313-373)||(45840053-45840113)
chr1 (297-369)||(50370068-50370139)
chr1 (321-380)||(46818497-46818556)
chr1 (285-376)||(47014448-47014541)
chr1 (316-381)||(1034963-1035026)
chr1 (202-241)||(4357001-4357040)
chr1 (290-380)||(30701351-30701439)
chr1 (313-368)||(47600023-47600078)
chr1 (313-380)||(50176629-50176696)
chr1 (319-373)||(7190770-7190824)
chr1 (330-379)||(3861699-3861748)
chr1 (313-373)||(41063856-41063916)
chr1 (338-381)||(37735395-37735438)
chr1 (338-380)||(2246026-2246068)
chr1 (320-354)||(6304791-6304825)
chr1 (307-345)||(10558747-10558785)
chr1 (313-346)||(5950583-5950616)
chr1 (315-380)||(7397813-7397878)
chr1 (313-346)||(13352235-13352268)
chr1 (313-346)||(16661748-16661781)
chr1 (313-346)||(25185290-25185323)
chr1 (313-346)||(35366190-35366223)
chr1 (313-346)||(39150842-39150875)
chr1 (295-336)||(43765469-43765510)
chr1 (290-342)||(44510182-44510235)
[»] chr8 (43 HSPs)
chr8 (290-380)||(13143911-13144000)
chr8 (290-380)||(43216316-43216402)
chr8 (290-380)||(26483637-26483728)
chr8 (290-381)||(34890136-34890230)
chr8 (290-381)||(24892945-24893036)
chr8 (290-379)||(30575801-30575888)
chr8 (290-380)||(7858633-7858727)
chr8 (290-380)||(36190877-36190969)
chr8 (314-380)||(7022392-7022458)
chr8 (315-380)||(8709776-8709841)
chr8 (313-379)||(34158278-34158344)
chr8 (295-369)||(45190700-45190774)
chr8 (314-379)||(15824626-15824691)
chr8 (316-381)||(29920259-29920324)
chr8 (290-375)||(8711986-8712066)
chr8 (316-379)||(2052969-2053032)
chr8 (313-380)||(16358100-16358167)
chr8 (292-380)||(7499820-7499909)
chr8 (290-346)||(13144262-13144318)
chr8 (292-380)||(15957877-15957966)
chr8 (295-380)||(41086358-41086441)
chr8 (318-371)||(11158675-11158728)
chr8 (313-380)||(35456008-35456080)
chr8 (316-381)||(44663783-44663845)
chr8 (314-379)||(4046882-4046948)
chr8 (293-381)||(28348714-28348805)
chr8 (290-380)||(38072268-38072360)
chr8 (313-380)||(8107605-8107673)
chr8 (316-380)||(16879384-16879447)
chr8 (345-380)||(31734220-31734255)
chr8 (290-380)||(41362271-41362362)
chr8 (290-346)||(5217530-5217587)
chr8 (320-373)||(34900037-34900090)
chr8 (296-361)||(3225489-3225556)
chr8 (321-373)||(6401732-6401784)
chr8 (290-379)||(14574940-14575031)
chr8 (333-380)||(35525692-35525737)
chr8 (319-375)||(40773397-40773453)
chr8 (313-372)||(17336855-17336914)
chr8 (322-376)||(17749562-17749616)
chr8 (313-346)||(17713362-17713395)
chr8 (316-353)||(33563498-33563535)
chr8 (315-371)||(7756685-7756741)
[»] chr5 (34 HSPs)
chr5 (290-381)||(42273753-42273844)
chr5 (290-375)||(37562726-37562810)
chr5 (290-381)||(20644120-20644214)
chr5 (314-379)||(43589950-43590015)
chr5 (314-381)||(6686491-6686558)
chr5 (290-380)||(34425437-34425525)
chr5 (292-381)||(9957400-9957489)
chr5 (290-379)||(12792749-12792839)
chr5 (313-380)||(20039209-20039276)
chr5 (290-380)||(11261847-11261938)
chr5 (313-379)||(12729872-12729937)
chr5 (308-380)||(23233518-23233590)
chr5 (314-381)||(25840970-25841037)
chr5 (329-381)||(37522592-37522644)
chr5 (328-379)||(32019929-32019980)
chr5 (294-360)||(104187-104255)
chr5 (319-375)||(30893243-30893299)
chr5 (297-379)||(38130086-38130169)
chr5 (321-380)||(43454318-43454377)
chr5 (325-380)||(19413248-19413303)
chr5 (299-380)||(5736212-5736294)
chr5 (314-354)||(4463491-4463531)
chr5 (321-373)||(32079618-32079670)
chr5 (314-381)||(39505220-39505288)
chr5 (344-381)||(5984126-5984163)
chr5 (290-346)||(8506572-8506626)
chr5 (323-380)||(12912292-12912348)
chr5 (316-381)||(17351494-17351559)
chr5 (331-380)||(41625517-41625565)
chr5 (290-380)||(16153309-16153400)
chr5 (313-346)||(28907301-28907334)
chr5 (313-346)||(28943696-28943729)
chr5 (341-381)||(8225568-8225608)
chr5 (290-346)||(30703742-30703797)
[»] chr4 (48 HSPs)
chr4 (290-381)||(39078260-39078353)
chr4 (290-381)||(20281695-20281785)
chr4 (290-381)||(2229351-2229444)
chr4 (290-380)||(4058820-4058909)
chr4 (291-381)||(24940469-24940559)
chr4 (290-379)||(28668956-28669047)
chr4 (290-381)||(14332864-14332954)
chr4 (290-380)||(26916430-26916521)
chr4 (314-381)||(47867983-47868050)
chr4 (290-381)||(55580774-55580867)
chr4 (296-380)||(41414575-41414658)
chr4 (314-381)||(7654721-7654788)
chr4 (313-380)||(29203611-29203678)
chr4 (316-375)||(12002616-12002675)
chr4 (313-380)||(16473853-16473920)
chr4 (316-379)||(50080439-50080502)
chr4 (313-378)||(10069804-10069869)
chr4 (324-380)||(16604837-16604893)
chr4 (314-381)||(8683287-8683354)
chr4 (313-379)||(5483258-5483324)
chr4 (315-369)||(20716296-20716350)
chr4 (314-379)||(35310723-35310788)
chr4 (316-380)||(17794524-17794588)
chr4 (313-381)||(56318050-56318118)
chr4 (314-381)||(42915634-42915701)
chr4 (290-381)||(48793585-48793676)
chr4 (290-380)||(21722640-21722729)
chr4 (315-366)||(52535579-52535630)
chr4 (325-373)||(7438760-7438808)
chr4 (316-380)||(32203318-32203382)
chr4 (313-380)||(5064635-5064702)
chr4 (316-380)||(1585332-1585394)
chr4 (316-368)||(19351968-19352021)
chr4 (339-379)||(32280009-32280049)
chr4 (290-346)||(23978109-23978161)
chr4 (325-376)||(31532445-31532496)
chr4 (319-373)||(38140698-38140752)
chr4 (293-346)||(28318382-28318435)
chr4 (345-381)||(31280293-31280329)
chr4 (316-375)||(14583839-14583898)
chr4 (316-351)||(32203413-32203448)
chr4 (313-380)||(32410433-32410500)
chr4 (323-373)||(40411762-40411812)
chr4 (313-346)||(8013069-8013102)
chr4 (290-346)||(36542948-36543005)
chr4 (313-342)||(37912027-37912056)
chr4 (316-375)||(25297203-25297260)
chr4 (315-379)||(28142604-28142668)
[»] chr7 (33 HSPs)
chr7 (292-379)||(6191153-6191239)
chr7 (290-380)||(46760218-46760310)
chr7 (292-380)||(18102637-18102727)
chr7 (290-381)||(19912730-19912823)
chr7 (290-380)||(14805976-14806068)
chr7 (290-380)||(15252970-15253062)
chr7 (314-381)||(45486061-45486128)
chr7 (290-381)||(25737588-25737681)
chr7 (292-380)||(12632312-12632397)
chr7 (314-381)||(35923358-35923424)
chr7 (314-379)||(47779712-47779777)
chr7 (313-381)||(25944682-25944750)
chr7 (316-378)||(14574673-14574735)
chr7 (319-379)||(37767011-37767071)
chr7 (290-380)||(22632196-22632288)
chr7 (313-379)||(4910621-4910685)
chr7 (316-378)||(15995828-15995891)
chr7 (338-381)||(20123691-20123734)
chr7 (316-381)||(44682983-44683048)
chr7 (316-368)||(27810735-27810787)
chr7 (333-379)||(11780125-11780171)
chr7 (315-381)||(16917577-16917643)
chr7 (315-361)||(31549744-31549790)
chr7 (290-346)||(3778119-3778173)
chr7 (313-380)||(35887955-35888022)
chr7 (290-373)||(38260430-38260513)
chr7 (325-375)||(19492391-19492441)
chr7 (319-373)||(22369330-22369384)
chr7 (319-373)||(33153148-33153202)
chr7 (293-353)||(2633302-2633363)
chr7 (313-346)||(7041662-7041695)
chr7 (316-345)||(11806600-11806629)
chr7 (313-345)||(10248672-10248704)
[»] chr6 (18 HSPs)
chr6 (290-381)||(21542524-21542617)
chr6 (314-381)||(35129042-35129109)
chr6 (290-381)||(11082207-11082300)
chr6 (314-381)||(34177629-34177696)
chr6 (314-381)||(7274863-7274930)
chr6 (316-379)||(17751734-17751797)
chr6 (314-381)||(3095708-3095775)
chr6 (313-375)||(9428857-9428919)
chr6 (290-373)||(5300574-5300658)
chr6 (316-368)||(12461419-12461471)
chr6 (316-381)||(30794182-30794247)
chr6 (316-380)||(14573118-14573181)
chr6 (313-346)||(7359103-7359136)
chr6 (313-346)||(16524829-16524862)
chr6 (314-346)||(4032129-4032161)
chr6 (315-346)||(3888845-3888876)
chr6 (319-373)||(5121449-5121503)
chr6 (319-381)||(5822027-5822089)
[»] chr2 (39 HSPs)
chr2 (287-380)||(12938349-12938442)
chr2 (314-381)||(35517229-35517296)
chr2 (313-381)||(28599134-28599202)
chr2 (290-380)||(45085364-45085455)
chr2 (313-378)||(6110185-6110250)
chr2 (290-381)||(3201432-3201526)
chr2 (316-381)||(9864707-9864773)
chr2 (315-381)||(19264206-19264272)
chr2 (290-380)||(45660472-45660566)
chr2 (313-376)||(7645213-7645276)
chr2 (313-380)||(11617131-11617198)
chr2 (314-381)||(25572151-25572218)
chr2 (316-375)||(35115792-35115851)
chr2 (314-381)||(40808707-40808774)
chr2 (290-381)||(8701708-8701800)
chr2 (319-375)||(35023010-35023066)
chr2 (313-380)||(41528363-41528431)
chr2 (313-379)||(33198617-33198683)
chr2 (313-379)||(43415509-43415575)
chr2 (314-381)||(29524028-29524095)
chr2 (316-381)||(6765922-6765987)
chr2 (316-381)||(24204518-24204583)
chr2 (316-375)||(44455101-44455160)
chr2 (304-380)||(32010209-32010286)
chr2 (313-380)||(28858416-28858486)
chr2 (325-379)||(5963308-5963362)
chr2 (316-353)||(11825348-11825385)
chr2 (313-380)||(30830582-30830649)
chr2 (316-363)||(32428098-32428145)
chr2 (316-375)||(33677595-33677654)
chr2 (333-378)||(5280536-5280582)
chr2 (313-346)||(16492925-16492958)
chr2 (345-380)||(14874070-14874105)
chr2 (319-370)||(33932915-33932966)
chr2 (320-376)||(4707532-4707585)
chr2 (313-379)||(26998425-26998491)
chr2 (290-380)||(38071102-38071192)
chr2 (313-346)||(20386764-20386797)
chr2 (292-353)||(23986985-23987050)
[»] chr3 (60 HSPs)
chr3 (290-380)||(9264662-9264749)
chr3 (313-381)||(35963262-35963330)
chr3 (290-381)||(11054232-11054325)
chr3 (290-381)||(37042338-37042431)
chr3 (313-381)||(14752154-14752222)
chr3 (307-379)||(29235299-29235371)
chr3 (313-380)||(46711604-46711671)
chr3 (313-380)||(50650983-50651050)
chr3 (314-380)||(30189682-30189748)
chr3 (290-380)||(47864302-47864394)
chr3 (317-381)||(31837029-31837093)
chr3 (313-380)||(41476281-41476349)
chr3 (313-380)||(7866429-7866496)
chr3 (292-375)||(8703220-8703306)
chr3 (292-375)||(9055107-9055193)
chr3 (290-380)||(23311516-23311606)
chr3 (313-380)||(23910459-23910526)
chr3 (316-375)||(26208130-26208189)
chr3 (290-381)||(26724914-26725005)
chr3 (290-381)||(6075191-6075284)
chr3 (290-380)||(19464186-19464281)
chr3 (290-381)||(28875516-28875603)
chr3 (296-381)||(36546652-36546738)
chr3 (296-381)||(36561577-36561663)
chr3 (294-381)||(37075070-37075159)
chr3 (313-379)||(54464842-54464908)
chr3 (313-381)||(50730218-50730287)
chr3 (313-381)||(50782567-50782636)
chr3 (290-375)||(8769506-8769587)
chr3 (313-380)||(53270346-53270412)
chr3 (313-375)||(8764625-8764687)
chr3 (314-381)||(2927399-2927467)
chr3 (313-379)||(33973512-33973579)
chr3 (313-355)||(579091-579133)
chr3 (316-374)||(47115966-47116024)
chr3 (290-379)||(25242101-25242190)
chr3 (316-364)||(47866873-47866921)
chr3 (290-346)||(10115050-10115105)
chr3 (290-373)||(54725543-54725627)
chr3 (291-373)||(2994338-2994421)
chr3 (345-380)||(6438194-6438229)
chr3 (313-380)||(22479000-22479067)
chr3 (290-352)||(47599583-47599646)
chr3 (290-353)||(46557091-46557156)
chr3 (313-346)||(8096964-8096997)
chr3 (316-381)||(20847219-20847282)
chr3 (325-381)||(32619787-32619844)
chr3 (313-346)||(34195027-34195060)
chr3 (299-342)||(6784763-6784807)
chr3 (314-346)||(10014408-10014440)
chr3 (314-346)||(10252150-10252182)
chr3 (315-346)||(38401523-38401554)
chr3 (313-380)||(47443920-47443987)
chr3 (312-346)||(32070337-32070371)
chr3 (340-381)||(2878212-2878253)
chr3 (291-348)||(6752799-6752856)
chr3 (313-346)||(29676463-29676496)
chr3 (316-353)||(41935863-41935900)
chr3 (313-373)||(22455954-22456014)
chr3 (290-346)||(30454649-30454704)
[»] scaffold0045 (1 HSPs)
scaffold0045 (313-380)||(78064-78131)
[»] scaffold0300 (1 HSPs)
scaffold0300 (318-380)||(565-627)
[»] scaffold0062 (1 HSPs)
scaffold0062 (313-381)||(44758-44826)
[»] scaffold0132 (2 HSPs)
scaffold0132 (292-375)||(1124-1207)
scaffold0132 (292-375)||(9084-9167)
[»] scaffold0442 (1 HSPs)
scaffold0442 (290-379)||(10153-10243)
[»] scaffold0009 (1 HSPs)
scaffold0009 (314-381)||(157900-157967)
[»] scaffold0565 (1 HSPs)
scaffold0565 (313-373)||(5862-5922)
[»] scaffold0330 (1 HSPs)
scaffold0330 (313-380)||(3275-3342)
[»] scaffold0774 (1 HSPs)
scaffold0774 (345-379)||(3447-3481)
[»] scaffold0018 (1 HSPs)
scaffold0018 (325-380)||(154968-155022)
[»] scaffold0005 (1 HSPs)
scaffold0005 (316-375)||(233477-233536)
[»] scaffold0010 (1 HSPs)
scaffold0010 (313-346)||(160906-160939)


Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 32 - 380
Target Start/End: Complemental strand, 4673290 - 4672938
Alignment:
Q  32 agttttcctatttgctcaattcgctttggtaaaataaatacacaacnnnnnnngaatggtctcccggggaggaatatgtgatgtgatcactcgtcacata 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||    
T  4673290 agttttcctatttgctcaattcgctttggtaaaataaatacacaacaaaaaaagaatggtctccctgggaggaatatgtgatgtgatcactcgtcacata 4673191  T
Q  132 agctagagctcactacatccatttaagagtaataataatggtctccaattttcagtctgaggtctttaaattttagacataaattatttttattcgttac 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4673190 agctagagctcactacatccatttaagagtaataataatggtctccaattttcagtctgaggtctttaaattttagacataaattatttttattcgttac 4673091  T
Q  232 attgtcaccatgataaggattaagaagtcttgtatgcataccaacacggggtatttccccgtcccaaattataagaagaagaaaaaat----cacactta 327  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   ||| || ||||||||||||||||||||||||||||||     ||||||||    
T  4673090 attgtcaccatgataaggattaaggagtcttgtatgcataccaacacaaagtactttcccgtcccaaattataagaagaagaaaaaaagaaccacactta 4672991  T
Q  328 ttaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4672990 ttaagaaaactaaaatataagaatttggagtatagttttttgtattttctttg 4672938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 24190667 - 24190575
Alignment:
Q  290 ccgtcccaaattataagaagaaga-aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24190667 ccgtcccaaattataagaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 24190575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 15959604 - 15959694
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15959604 ccgtcccaaattataagtaaaaaaaaaaatcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttg 15959694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 39555555 - 39555640
Alignment:
Q  296 caaattataagaagaagaaaa-aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  39555555 caaattataagaagaagaaaaaaatcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttg 39555640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 6787012 - 6786944
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6787012 aaaaaatcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttgg 6786944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 28016709 - 28016800
Alignment:
Q  290 ccgtcccaaattataagaagaaga-aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  28016709 ccgtcccaaattataagcaaaaaataaaaatcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttg 28016800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 33369723 - 33369656
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33369723 aaaaatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgg 33369656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 13136541 - 13136607
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13136541 aaaaaatcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttcttt 13136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 32623970 - 32624059
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||| |||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32623970 ccgtcctaaattataagcaaaa-aaaaaatcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttg 32624059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 11241218 - 11241133
Alignment:
Q  297 aaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||| || || ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11241218 aaattataagcaaaaaaaaaaaatcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgg 11241133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 381
Target Start/End: Original strand, 32983142 - 32983227
Alignment:
Q  297 aaattataagaagaagaaaa-aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  32983142 aaattataagaagaaaaaaaaaatcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttgg 32983227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 52985104 - 52985039
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52985104 aaatcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttgg 52985039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 2126212 - 2126144
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2126212 aaaaaatcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttgg 2126144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 380
Target Start/End: Complemental strand, 40718866 - 40718785
Alignment:
Q  297 aaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||  ||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  40718866 aaattataag--gaaaaaaaaatcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttg 40718785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 32742173 - 32742255
Alignment:
Q  296 caaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||| | || ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  32742173 caaattataagcaaaa-aaaaaatcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttcttt 32742255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 6785629 - 6785564
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6785629 aaaaaaacacacttattaagaaaactaaaacataagaa-ttggagtatagttttttgtgttttcttt 6785564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 42965803 - 42965871
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  42965803 aaaaaatcatacttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttgg 42965871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 44148824 - 44148891
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||    
T  44148824 aaaaatcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttgg 44148891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 45226312 - 45226245
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||||    
T  45226312 aaaaaatcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttg 45226245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 46543156 - 46543089
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46543156 aaaaaatcatatttattaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttg 46543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 24728614 - 24728680
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttcttt 379  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  24728614 aaaaatcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttcttt 24728680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 380
Target Start/End: Complemental strand, 35691565 - 35691500
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  35691565 aaaaatcacatttattaagaaa-ctaaaacataagaatttggagtataattttttgtgttttctttg 35691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 39932559 - 39932621
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  39932559 aaaaaatcacactaaaaaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 39932621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 7467925 - 7468018
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatca-cacttattaagaaaactaaaacataagaatttggagt-atagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || ||||||  | ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  7467925 ccgtcccaaattataagcaaaaaaaaaaaaaatcacttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttgg 7468018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 28120717 - 28120804
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaa--tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||| | ||||||||||||| ||||||  ||||| |||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  28120717 ccgtcctagattataagaagaaaaaaaaaagtcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgtttt 28120804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 3076468 - 3076401
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||| |||| |||||||||||| || ||||||||||||||||| |||||    
T  3076468 aaaaatcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttgg 3076401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 3875006 - 3875068
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||    
T  3875006 aaaaaatcacacttattaagaaaagtaaaacataagaatttgaagtatagttttgtgtttttt 3875068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 43667267 - 43667357
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||| |||||||||  | || ||||||||||| |||||||||||| ||| ||||||||||||  |||||| ||||||||||||||||||    
T  43667267 ccgtcctaaattataaacaaaaaaaaaaatcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttg 43667357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 50012769 - 50012687
Alignment:
Q  297 aaattataagaagaagaaaaaatcacacttattaagaaaact-aaaacataagaatttggagtatagttttttgtgttttctt 378  Q
    ||||||| ||||||| | ||||||||||||||||| |||| | |||| ||| |||||||||||||||||||||||||||||||    
T  50012769 aaattattagaagaaaataaaatcacacttattaaaaaaaattaaaatataggaatttggagtatagttttttgtgttttctt 50012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 7875929 - 7875994
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||| ||||| |||| |||||| | |||||||||||||||||||||||    
T  7875929 aaaatcacacttattaagaaaattaaaatataaaaatttgaattatagttttttgtgttttctttg 7875994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 37192679 - 37192757
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaa---tcacacttattaagaaaactaaaacataagaatttggagtatagttt 365  Q
    |||||||||||||||||||||||||||||   ||||| |||||||||||||||||| |||| || ||||||||| ||||    
T  37192679 ccgtcccaaattataagaagaagaaaaaaaattcacagttattaagaaaactaaaatataataaattggagtatcgttt 37192757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 366
Target Start/End: Complemental strand, 1820613 - 1820536
Alignment:
Q  290 ccgtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagtttt 366  Q
    |||||||||||||||||  || || ||||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  1820613 ccgtcccaaattataagcaaataaaaaaaaat-actcttattaagaaaactaaaacataagaatttggaatatagtttt 1820536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 30221930 - 30221833
Alignment:
Q  285 tttccccgtcccaaattataagaagaagaaa---aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||| |||||||||||| |||| | ||||||   || ||||||| |||||||||| ||||||||||||| ||||| |||| |||||||||||||||||    
T  30221930 tttctccgtcccaaattgtaagcaaaagaaactcaattcacactaattaagaaaattaaaacataagaacttggaatataattttttgtgttttcttt 30221833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 33431729 - 33431671
Alignment:
Q  317 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||    
T  33431729 aatcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttt 33431671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 12448969 - 12449021
Alignment:
Q  327 attaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  12448969 attaagaaaattaaaa-ataagaatttggagtatagttttttgtgttttctttg 12449021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 45840053 - 45840113
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||||||||||||||||||||||||| | |||| |  |||||||||||||||    
T  45840053 aaaaaatcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgtt 45840113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 50370139 - 50370068
Alignment:
Q  297 aaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttg 369  Q
    ||||||||||||||| ||||||||||| ||||||| |||| ||||| ||||||||||| ||||| ||||||||    
T  50370139 aaattataagaagaa-aaaaaatcacatttattaaaaaaattaaaatataagaatttgaagtattgttttttg 50370068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 380
Target Start/End: Original strand, 46818497 - 46818556
Alignment:
Q  321 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||||| |||||||||    
T  46818497 acacttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttg 46818556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 376
Target Start/End: Original strand, 47014448 - 47014541
Alignment:
Q  285 tttccccgtcccaaattataag----aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 376  Q
    |||| |||||||||||||||||    || || |||||| |||||||| |||| |||||||||||||||||| |||||  |||||||||||||||||    
T  47014448 tttctccgtcccaaattataagcaaaaaaaaaaaaaaaacacacttactaagtaaactaaaacataagaatctggag--tagttttttgtgttttc 47014541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 1035026 - 1034963
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||  | |||||||||||||||||    
T  1035026 aaatcacatttattaagaaaattaaaacataagaatttggcgtat--tgttttgtgttttctttgg 1034963  T

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Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 4357001 - 4357040
Alignment:
Q  202 ttttagacataaattatttttattcgttacattgtcacca 241  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  4357001 ttttagacatacattatttttattcgttacattgtcacca 4357040  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 30701351 - 30701439
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||| ||||||||  ||| ||||||||||||||||||| ||||||||||||||  | |||| |  ||| ||||||||||| ||||||    
T  30701351 ccgtcccatattataag--gaaaaaaaaatcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttg 30701439  T

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Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 47600023 - 47600078
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagtttttt 368  Q
    |||||| |||| ||||||| |||| |||||||||||||||| ||||||||||||||    
T  47600023 aaaaaaacacatttattaaaaaaattaaaacataagaatttagagtatagtttttt 47600078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 50176696 - 50176629
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||||||    
T  50176696 aaaaaatcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttg 50176629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 7190824 - 7190770
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||| ||||||||||||| | ||||| ||||||||||| |||||||    
T  7190824 tcacacttattaaaaaaactaaaacatgataatttagagtatagtttcttgtgtt 7190770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 3861699 - 3861748
Alignment:
Q  330 aagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||| |||||| |||||| |||||| ||||||||||    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttcttt 3861748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 41063916 - 41063856
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||||||||||||||| ||||||||  | |||| |  |||||||||||||||    
T  41063916 aaaaaatcacacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgtt 41063856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 37735395 - 37735438
Alignment:
Q  338 taaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  37735395 taaaacataagaatctgaagtatagttttttgtattttctttgg 37735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 2246026 - 2246068
Alignment:
Q  338 taaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||| | ||||| ||||||||||||||||||||||||||    
T  2246026 taaaacattaaaatttagagtatagttttttgtgttttctttg 2246068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 354
Target Start/End: Original strand, 6304791 - 6304825
Alignment:
Q  320 cacacttattaagaaaactaaaacataagaatttg 354  Q
    |||||||||||||||||||||||||||| ||||||    
T  6304791 cacacttattaagaaaactaaaacataataatttg 6304825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 10558747 - 10558785
Alignment:
Q  307 aagaagaaaaaatcacacttattaagaaaactaaaacat 345  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  10558747 aagaaaaaaaaatcacacttattaagaaaactagaacat 10558785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 5950616 - 5950583
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||| ||||||||||||||||||||||||||||    
T  5950616 aaaaattcacacttattaagaaaactaaaacata 5950583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 380
Target Start/End: Complemental strand, 7397878 - 7397813
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| |||||||||| |||  | |||| |  ||||||||||||||| ||||||    
T  7397878 aaaatcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttg 7397813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 13352268 - 13352235
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||||||| |||||||||||||||||||||    
T  13352268 aaaaaatcacacatattaagaaaactaaaacata 13352235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 16661781 - 16661748
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||| ||||||||||||||||||||||    
T  16661781 aaaaaatcacatttattaagaaaactaaaacata 16661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 25185290 - 25185323
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||| ||||||||||||||||||||||||    
T  25185290 aaaaaatcatacttattaagaaaactaaaacata 25185323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 35366190 - 35366223
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||| ||||||||||||||||||||||||||    
T  35366190 aaaaaataacacttattaagaaaactaaaacata 35366223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 39150842 - 39150875
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||| ||||||||    
T  39150842 aaaaaatcacacttattaagaaaaccaaaacata 39150875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 43765469 - 43765510
Alignment:
Q  295 ccaaattataagaagaagaaaaaatcacacttattaagaaaa 336  Q
    ||||||||||| || || ||||||||||||||||||||||||    
T  43765469 ccaaattataaaaaaaataaaaaatcacacttattaagaaaa 43765510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 44510182 - 44510235
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaa-aatcacacttattaagaaaactaaaa 342  Q
    |||||||| |||||||||| || |||| |||||||||| |||||||||||||||    
T  44510182 ccgtcccatattataagaaaaaaaaaaaaatcacacttcttaagaaaactaaaa 44510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 13143911 - 13144000
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13143911 ccgtcccaaattataagaagaa-aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 13144000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 43216316 - 43216402
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43216316 ccgtcccaaattataagaa----aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 43216402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 26483728 - 26483637
Alignment:
Q  290 ccgtcccaaattataagaagaaga-aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26483728 ccgtcccaaattataagaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttg 26483637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 34890136 - 34890230
Alignment:
Q  290 ccgtcccaaattataag---aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34890136 ccgtcccaaattataagcaaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgg 34890230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 24893036 - 24892945
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || |||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  24893036 ccgtcccaaattataagcaaaaaaaaaaaacacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttgg 24892945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 30575801 - 30575888
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  30575801 ccgtctcaaattataagaaaaa--aaaaatcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttcttt 30575888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 7858727 - 7858633
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaa----tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||| ||||||||||||||| ||||||    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7858727 ccgtcctaaattataagaagaaaaaaaaaaaaatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttg 7858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 36190969 - 36190877
Alignment:
Q  290 ccgtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||| ||||||||||||  || || |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36190969 ccgttccaaattataagtaaaaaaaaaaaaatcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttg 36190877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 380
Target Start/End: Original strand, 7022392 - 7022458
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7022392 aaaaatcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttg 7022458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 8709776 - 8709841
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8709776 aaaatcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 8709841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 34158278 - 34158344
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  34158278 aaaaaatcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttcttt 34158344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 45190774 - 45190700
Alignment:
Q  295 ccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttg 369  Q
    |||||||||||||| || |  ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  45190774 ccaaattataagaaaaaaatcaaatcacacttgttaagaaaactaaaacataagaatttggagcatagttttttg 45190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 15824626 - 15824691
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||| || ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15824626 aaaaatcgcatttagtaagaaaactaaaacataagaatttgaagtatagttttttgtgttttcttt 15824691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 29920259 - 29920324
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| |||||||    
T  29920259 aaatcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttgg 29920324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 8712066 - 8711986
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||    |||||||||||||||||||||||||    
T  8712066 ccgtcccaaattataagaaaaa-aaaacatcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgtttt 8711986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 2053032 - 2052969
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  2053032 aaatcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttcttt 2052969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 16358100 - 16358167
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||| |||||||||||    
T  16358100 aaaaaatcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgttttctttg 16358167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 7499909 - 7499820
Alignment:
Q  292 gtcccaaattataagaagaagaaaaaa-tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||| | || |||||| ||||| |||||||||||||||||||||| |||||| |||||||  |||||| ||||||||||    
T  7499909 gtcccaaattataagcacaaaaaaaaaatcacatttattaagaaaactaaaacataggaatttagagtataactttttgcgttttctttg 7499820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 13144318 - 13144262
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  13144318 ccgtcccaaattataagcaaaaaaaaaaatcacacttattaagaaaactaaaacata 13144262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 380
Target Start/End: Original strand, 15957877 - 15957966
Alignment:
Q  292 gtcccaaattataagaagaagaaaaaatcacacttattaagaaaa--ctaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||| |||||||||| | || ||||||||||||||||||| ||||  |||||| ||||||| |||||||||||||| ||||||||||||||    
T  15957877 gtcctaaattataagtaaaa-aaaaaatcacacttattaaaaaaaaactaaaatataagaaattggagtatagtttattgtgttttctttg 15957966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 41086358 - 41086441
Alignment:
Q  295 ccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||| ||  |||||||| | |||||||||||||||||  |||| |||||| | |||||||||||||||||||||||    
T  41086358 ccaaattataagaaaaa--aaaaatcatatttattaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttg 41086441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 11158728 - 11158675
Alignment:
Q  318 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtg 371  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  11158728 atcaaacttattaagaaaactaaaacataagaatttggaatataattttttgtg 11158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 35456008 - 35456080
Alignment:
Q  313 aaaaaatcacacttattaagaaaacta-----aaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||||||     ||||||||||||||| ||||||||||||| |||||| ||||    
T  35456008 aaaaaatcacacttattaagaaaactagtgtaaaacataagaatttgaagtatagttttttatgttttttttg 35456080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 44663783 - 44663845
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||   ||||||||||||||||    
T  44663783 aaatcacacttattaagaaaactaaattataagaatttagagtatag---tttgtgttttctttgg 44663845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 4046882 - 4046948
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttt-tgtgttttcttt 379  Q
    ||||||||||||||||||||||| ||||  ||||||||||| || ||||||||| ||||||||||||    
T  4046882 aaaaatcacacttattaagaaaattaaagtataagaatttgtagcatagtttttgtgtgttttcttt 4046948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 381
Target Start/End: Complemental strand, 28348805 - 28348714
Alignment:
Q  293 tcccaaattataagaagaagaaaa---aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||| || ||||   ||  |||| ||||| |||||  ||||||||||||||||||||||||| |||||| ||||||||||    
T  28348805 tcccaaattataagaaaaaaaaaataaaaatacacatattacgaaaataaaaacataagaatttggagtatagtattttgtattttctttgg 28348714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 38072360 - 38072268
Alignment:
Q  290 ccgtcccaaattataagaag--aagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||| ||||||||||   || ||||||||||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||||||    
T  38072360 ccgtcccatattataagaaagaaaaaaaaaatcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttg 38072268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 8107605 - 8107673
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctttg 380  Q
    ||||||| ||| ||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||||||    
T  8107605 aaaaaattacatttattaaaaaaattaaaatataagaatttggagtatagtttttttgtattttctttg 8107673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 16879384 - 16879447
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||| ||| || |||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  16879384 aaatcacacctataaa-aaaactaaaatataagaatttgaagtataattttttgtgttttctttg 16879447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 31734255 - 31734220
Alignment:
Q  345 taagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||||    
T  31734255 taagaatttggagtatagttttttgtgttttctttg 31734220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 41362271 - 41362362
Alignment:
Q  290 ccgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||| |||||||| || || |||||| |||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||||||    
T  41362271 ccgtcccatattataagcaacaaaaaaaaagcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttg 41362362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 5217587 - 5217530
Alignment:
Q  290 ccgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||| |||||||| || || ||||||||||||||||||||||||||| ||||||    
T  5217587 ccgtcccatattataagcaaaaaaaaaaaatcacacttattaagaaaactataacata 5217530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 34900090 - 34900037
Alignment:
Q  320 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||||||||||||||||||||||||| ||||||   |||| |||||||||||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgtt 34900037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 3225489 - 3225556
Alignment:
Q  296 caaattataagaagaagaaa--aaatcacacttattaagaaaactaaaacataagaatttggagtata 361  Q
    ||||||||||||| || |||  |||||||| |||||| |||||||||||||||| ||| |||||||||    
T  3225489 caaattataagaaaaaaaaatcaaatcacaattattatgaaaactaaaacataataatctggagtata 3225556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 6401784 - 6401732
Alignment:
Q  321 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||||| |||||| |||  |||||| ||||||||||||||||||    
T  6401784 acacttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgtt 6401732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 14574940 - 14575031
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaa--tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||| ||| ||||||||||||||||||||  | |||||||||||||||||| |||||||  |||||| |  ||||| | ||||||| |||||    
T  14574940 ccgttccatattataagaagaagaaaaaaaattacacttattaagaaaactgaaacatactaatttgcaacatagtgtcttgtgttatcttt 14575031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 35525737 - 35525692
Alignment:
Q  333 aaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  35525737 aaaactaaaacataagaatttagagtatag--ttttgtgttttctttg 35525692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 40773397 - 40773453
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||| |||| ||||||||    
T  40773397 tcacatttattaaaaaaactaaaatataacaatttggagtataattttgtgtgtttt 40773453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 17336914 - 17336855
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgt 372  Q
    |||||||||||||||||||||||||||||| |||  | |||| |  ||||||||||||||    
T  17336914 aaaaaatcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgt 17336855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 17749562 - 17749616
Alignment:
Q  322 cacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 376  Q
    ||||||||||||| | | |||||||| |||||| |||||||||| ||||||||||    
T  17749562 cacttattaagaatatttaaacataataatttgaagtatagtttattgtgttttc 17749616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 17713395 - 17713362
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||| ||||||||||||||    
T  17713395 aaaaaatcacacttattaaaaaaactaaaacata 17713362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 33563498 - 33563535
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaattt 353  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  33563498 aaatcacatttattaagaaaattaaaacataagaattt 33563535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 7756741 - 7756685
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtg 371  Q
    ||||||||| ||||||||||| |||||||| || |||||| ||||||  ||||||||    
T  7756741 aaaatcacatttattaagaaacctaaaacacaataatttgaagtataactttttgtg 7756685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 42273844 - 42273753
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42273844 ccgtcccaaattataagcaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 42273753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 37562726 - 37562810
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37562726 ccgtcccaaattataagcaaaa-aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 37562810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 20644214 - 20644120
Alignment:
Q  290 ccgtcccaaattataag---aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20644214 ccgtcccaaattataagcaaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgg 20644120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 43589950 - 43590015
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43589950 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 43590015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 6686558 - 6686491
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6686558 aaaaatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 6686491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 34425525 - 34425437
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||| |||||||||||  ||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34425525 ccgtctcaaattataag--gaaaaaaaaaacacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttg 34425437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 9957400 - 9957489
Alignment:
Q  292 gtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9957400 gtcccaaattataagtaaaaaaaaaaaatcacacttattaagaaaactaaaacatgagaatttggagtatag-tttttgtgttttctttgg 9957489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 12792749 - 12792839
Alignment:
Q  290 ccgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||| |||||||||| || || ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  12792749 ccgtcctaaattataagcaaaaaaaaaaaatcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgttttcttt 12792839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 20039276 - 20039209
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20039276 aaaaattcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttg 20039209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 11261847 - 11261938
Alignment:
Q  290 ccgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||| |||||||||| || || |||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  11261847 ccgtcctaaattataagcaaaaaaaaaaaatcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttg 11261938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 12729872 - 12729937
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  12729872 aaaaaatcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgttttcttt 12729937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 23233590 - 23233518
Alignment:
Q  308 agaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  23233590 agaaaaaaaaatcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttg 23233518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 25841037 - 25840970
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||| ||||| |||||| || |||||||||||||||||||||||    
T  25841037 aaaaatcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttgg 25840970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 37522592 - 37522644
Alignment:
Q  329 taagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttgg 37522644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 32019980 - 32019929
Alignment:
Q  328 ttaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32019980 ttaagaaaactaaaacataagaatttggagtatagttttctgtgttttcttt 32019929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 104187 - 104255
Alignment:
Q  294 cccaaattataagaagaagaaaaaatcacacttattaagaaaa--ctaaaacataagaatttggagtat 360  Q
    |||||||||||||||||||||||||||| ||||||||| ||||  ||||||||||| ||||||||||||    
T  104187 cccaaattataagaagaagaaaaaatcatacttattaaaaaaaatctaaaacataaaaatttggagtat 104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 30893243 - 30893299
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  30893243 tcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtttt 30893299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 38130086 - 38130169
Alignment:
Q  297 aaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagta---tagttttttgtgttttcttt 379  Q
    |||||||||||| || |||| |||||||| |||||||||||||||||||||||||||||| ||   ||||||||||||||||||||    
T  38130086 aaattataagaaaaa-aaaatatcacact-attaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttcttt 38130169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 380
Target Start/End: Original strand, 43454318 - 43454377
Alignment:
Q  321 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||    
T  43454318 acacttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttg 43454377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 19413303 - 19413248
Alignment:
Q  325 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||  ||||||||||| || ||||||||||||||||||||||    
T  19413303 ttattaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttg 19413248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 380
Target Start/End: Original strand, 5736212 - 5736294
Alignment:
Q  299 attataagaagaagaaaa-aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||  | |||| |  |||||||||| |||| ||||||    
T  5736212 attataagaagaagaaaaaaatcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttatgttatctttg 5736294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 4463531 - 4463491
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttg 354  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  4463531 aaaaatcacacttattaagaaaactaaagcataagaatttg 4463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 32079670 - 32079618
Alignment:
Q  321 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||||| ||||    
T  32079670 acacttattaagaaaactaaaacattataatttggattatagttttttatgtt 32079618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 39505220 - 39505288
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctttgg 381  Q
    |||||||||||||||||| |||| ||||  ||||||||||| || |||| |||||||||||||||||||    
T  39505220 aaaaatcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttgg 39505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 5984126 - 5984163
Alignment:
Q  344 ataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||| |||||||||||||||||||||||||||    
T  5984126 ataagaatttagagtatagttttttgtgttttctttgg 5984163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 8506626 - 8506572
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||| ||||||||  ||| ||||||| ||||||||||||||||||||||||||    
T  8506626 ccgtcccatattataag--gaaaaaaaaattacacttattaagaaaactaaaacata 8506572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 12912292 - 12912348
Alignment:
Q  323 acttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||| || | ||||| |||||||||||||||| ||||||    
T  12912292 acttattaagaaaactaaaacat-agtagttggaatatagttttttgtgttatctttg 12912348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 17351559 - 17351494
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||| |||||||||||||||| || ||| || ||||||||||||||||| | ||||| ||||    
T  17351559 aaatcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttgg 17351494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 41625517 - 41625565
Alignment:
Q  331 agaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||||    
T  41625517 agaaaactaaaacataagaattt-aaatatagttttttgtgttttctttg 41625565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 16153309 - 16153400
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaa-ctaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||| || |||||||| | || ||||||||| ||||||||| |||| ||||||||||| | |||| |  ||||||||||||||| ||||||    
T  16153309 ccgtctcatattataagcaaaaaaaaaaatcatacttattaaaaaaaactaaaacataatagtttgtaacatagttttttgtgttatctttg 16153400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 28907334 - 28907301
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||| ||||||||||||||||||||||    
T  28907334 aaaaaatcacatttattaagaaaactaaaacata 28907301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 28943729 - 28943696
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||| ||||||||||||||||||||||    
T  28943729 aaaaaatcacatttattaagaaaactaaaacata 28943696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 8225608 - 8225568
Alignment:
Q  341 aacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||| ||||||||||| ||||||||||||| ||||||||||    
T  8225608 aacaaaagaatttggactatagttttttgtattttctttgg 8225568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 30703797 - 30703742
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||| |||||||| | || ||||||||| ||||||||| ||||||||||||||    
T  30703797 ccgtcccatattataagcaaaa-aaaaaatcatacttattaacaaaactaaaacata 30703742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 39078353 - 39078260
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaa--tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39078353 ccgtcccaaattataagaaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 39078260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 20281785 - 20281695
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20281785 ccgtcccaaattataagcaaaa-aaaatatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 20281695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 2229444 - 2229351
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2229444 ccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 2229351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 4058909 - 4058820
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4058909 ccgtcccaaattataagcaaaa-aaaaaatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 4058820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 24940559 - 24940469
Alignment:
Q  291 cgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  24940559 cgtcccaaattataagcaaaagaaaaaatcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttgg 24940469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 28668956 - 28669047
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaa--aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28668956 ccgtcctaaattataagaagaagaaaaaaaatcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttcttt 28669047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 14332954 - 14332864
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14332954 ccgttccaaattataagaaaaa-aaaaaatcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttgg 14332864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 26916521 - 26916430
Alignment:
Q  290 ccgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26916521 ccgtcccaaattataaacaaaaataaaaaatcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttg 26916430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 47868050 - 47867983
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47868050 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 47867983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 55580867 - 55580774
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaa--tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||| ||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  55580867 ccgtcccaaattataagaagaaaaaaaaaagtcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttgg 55580774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 41414575 - 41414658
Alignment:
Q  296 caaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41414575 caaattataagcaaaa-aaaaaatcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttg 41414658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 7654788 - 7654721
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7654788 aaaaatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgg 7654721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 29203678 - 29203611
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29203678 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttg 29203611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 12002616 - 12002675
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12002616 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 12002675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 16473920 - 16473853
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16473920 aaaaaattacacttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttg 16473853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 50080439 - 50080502
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  50080439 aaatcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttcttt 50080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 10069869 - 10069804
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctt 378  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  10069869 aaaaaatcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttctt 10069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 16604837 - 16604893
Alignment:
Q  324 cttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16604837 cttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttg 16604893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 8683287 - 8683354
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||    
T  8683287 aaaaatcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttgg 8683354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 5483258 - 5483324
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||| |||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  5483258 aaaaaatcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttcttt 5483324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 20716350 - 20716296
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttg 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20716350 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagtcttttg 20716296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 35310723 - 35310788
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||| | |||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  35310723 aaaaatcatatttattaagaaaactaaaacataagaatttgtagcatagttttttgtgttttcttt 35310788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 17794524 - 17794588
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||    
T  17794524 aaatcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttg 17794588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 56318050 - 56318118
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||| ||||||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  56318050 aaaaaataacacttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttgg 56318118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 42915701 - 42915634
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||| |||||||||||| |||||||||| ||||||||||| || |||||||||||||||||||||||    
T  42915701 aaaaaccacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttgg 42915634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 48793585 - 48793676
Alignment:
Q  290 ccgtcccaaattataagaagaaga--aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||| |||||||||||| || |  |||||||||||||||||||||||||||| |||||||||||| || ||||  |||||||||||||||||    
T  48793585 ccgtcctaaattataagaaaaaaaccaaaaatcacacttattaagaaaactaaagcataagaatttgtagcatag--ttttgtgttttctttgg 48793676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 21722640 - 21722729
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||| |||||| || |  |||||||||||||||| |||||||||||||||||||||  |||||||| |||| |||||||||||    
T  21722640 ccgtcccaaattgtaagaaaaa-atcaaatcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttg 21722729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 52535579 - 52535630
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagtttt 366  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  52535579 aaaattacacttattaagaaaactaaagcataagaatttggagtatagtttt 52535630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 373
Target Start/End: Complemental strand, 7438808 - 7438760
Alignment:
Q  325 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7438808 ttattaagaaaactaaaacataataatttggagtatagtttttggtgtt 7438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 380
Target Start/End: Complemental strand, 32203382 - 32203318
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||| ||||| |||||||||||||||||||||  |||||||||||||||  ||||||||    
T  32203382 aaatcacactaattaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttg 32203318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 5064635 - 5064702
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||  |||||| |  ||| ||||||||||| ||||||    
T  5064635 aaaaaatcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttg 5064702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 1585332 - 1585394
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||   ||||||||||||||||    
T  1585332 aaatcacacttgttaagaaaagtaaaacataagattttggagtata--attttgtgttttctttg 1585394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 19352021 - 19351968
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacat-aagaatttggagtatagtttttt 368  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  19352021 aaatcacacttattaagaaaactaaaacataaaaaaattggagtatagtttttt 19351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 32280009 - 32280049
Alignment:
Q  339 aaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  32280009 aaaacataagaatttggagtataattttttgtgttttcttt 32280049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 23978109 - 23978161
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||| ||||||||||    ||||||||||||||||||||||||||||||||||    
T  23978109 ccgtcccatattataagaa----aaaaaatcacacttattaagaaaactaaaacata 23978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 376
Target Start/End: Original strand, 31532445 - 31532496
Alignment:
Q  325 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 376  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| |||||||    
T  31532445 ttattaagaaaactaaaacattacaatttagagtatagttttttatgttttc 31532496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 38140698 - 38140752
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||||||||||||| ||| | ||||| ||||||||||| |||||||    
T  38140698 tcacacttattaagaaaactaaagcatgataattttgagtatagtttcttgtgtt 38140752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 28318382 - 28318435
Alignment:
Q  293 tcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||| ||||||||||  | ||||||||||||||||||| ||||||||||||||    
T  28318382 tcccatattataagaaagaaaaaaaatcacacttattaacaaaactaaaacata 28318435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 31280329 - 31280293
Alignment:
Q  345 taagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31280329 taagaatttagagtatagttttttgtgttttctttgg 31280293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 14583898 - 14583839
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||||| |||||||||||||||||| ||||||||||    ||||||| ||||||||||    
T  14583898 aaatcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttt 14583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 351
Target Start/End: Complemental strand, 32203448 - 32203413
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaat 351  Q
    |||||||||||||||| |||||||||||||||||||    
T  32203448 aaatcacacttattaaaaaaactaaaacataagaat 32203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 32410500 - 32410433
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||| ||||||  | |||  | || ||||||||||||| ||||||    
T  32410500 aaaaaatcacacttattaagaaaactacaacatagtagtttataataaagttttttgtgttatctttg 32410433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 40411812 - 40411762
Alignment:
Q  323 acttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||||||||||||||  | |||| | ||||||||||||||||    
T  40411812 acttattaagaaaactaaaacatagtagtttgtaatatagttttttgtgtt 40411762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 8013069 - 8013102
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||| ||||||||||||||||||||||    
T  8013069 aaaaaatcacatttattaagaaaactaaaacata 8013102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 36543005 - 36542948
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaat-cacacttattaagaaaactaaaacata 346  Q
    |||||||| ||||||||||||| ||||||  |||| |||||||||||| |||||||||    
T  36543005 ccgtcccatattataagaagaaaaaaaaaaacacagttattaagaaaagtaaaacata 36542948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 342
Target Start/End: Complemental strand, 37912056 - 37912027
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaa 342  Q
    ||||||||||||||||||||||||||||||    
T  37912056 aaaaaatcacacttattaagaaaactaaaa 37912027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 25297203 - 25297260
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||||| ||| |||||   |||| |||| ||||||||||||||||    
T  25297203 aaatcacacttattaagaaaagtaatacata--catttagagtctagttttttgtgtttt 25297260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 379
Target Start/End: Original strand, 28142604 - 28142668
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||||||||||||| || | | |||| |  ||| ||||||||||| |||||    
T  28142604 aaaatcacacttattaagaaaactaaaatatgatagtttgtaacataattttttgtgttatcttt 28142668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 6191239 - 6191153
Alignment:
Q  292 gtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6191239 gtcccaaattataaggaaaa-aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 6191153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 46760218 - 46760310
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| | || ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46760218 ccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 46760310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 18102727 - 18102637
Alignment:
Q  292 gtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18102727 gtcccaaattataagcaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttg 18102637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 19912730 - 19912823
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||  | |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19912730 ccgtcccaaattataaacaaaagaacaaaaatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 19912823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 14806068 - 14805976
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14806068 ccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg 14805976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 15253062 - 15252970
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15253062 ccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg 15252970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 45486128 - 45486061
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45486128 aaaaatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgg 45486061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 25737588 - 25737681
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || ||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  25737588 ccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttgg 25737681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 380
Target Start/End: Original strand, 12632312 - 12632397
Alignment:
Q  292 gtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||  ||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  12632312 gtcccaaattataag--gaa-aaaaaatcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttg 12632397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 35923424 - 35923358
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  35923424 aaaaatcacacttattaagaaaactaaaacataaaaatttggagtatagt-ttttgtgttttctttgg 35923358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 47779777 - 47779712
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  47779777 aaaaatcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttcttt 47779712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 25944750 - 25944682
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  25944750 aaaaaataacacttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttgg 25944682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 14574735 - 14574673
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctt 378  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  14574735 aaataacacttattaagaaaaccaaaatataagaatttggagtatagttttttgtgttttctt 14574673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 37767011 - 37767071
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  37767011 tcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgttttcttt 37767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 22632288 - 22632196
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||| | || ||  ||||||||||||||||||||||||||| ||||| | |||| || |||| |||||||||||||||||    
T  22632288 ccgtcccaaattataagtaaaaaaataaaaatcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttg 22632196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 4910621 - 4910685
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||||  ||||||||||||||||    
T  4910621 aaaaaatcacacttatttaaaaaactaaaacataagaatttgaagtata--tttttgtgttttcttt 4910685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 15995891 - 15995828
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagtt-ttttgtgttttctt 378  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  15995891 aaataacacttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttctt 15995828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 20123691 - 20123734
Alignment:
Q  338 taaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttgg 20123734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 44683048 - 44682983
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||| | ||||||||||||| || |||||||||||||||||| | ||||||||||| |||||    
T  44683048 aaatcacattcattaagaaaactagaaaataagaatttggagtataatattttgtgttttttttgg 44682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 27810735 - 27810787
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagtttttt 368  Q
    |||||||||||||||| |||||  ||||||||||||||||||||| |||||||    
T  27810735 aaatcacacttattaacaaaacagaaacataagaatttggagtattgtttttt 27810787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 11780171 - 11780125
Alignment:
Q  333 aaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||    
T  11780171 aaaactaaaatataagaatttggaatatagtttttcgtgttttcttt 11780125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 16917643 - 16917577
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||| |||||||||| |||||| | ||||   |||||| ||||||||||    
T  16917643 aaaatcacacttattaagaaaattaaaacataaaaatttgaaatataacattttgttttttctttgg 16917577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 361
Target Start/End: Original strand, 31549744 - 31549790
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtata 361  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||    
T  31549744 aaaatcgcacttattaagaaaactaaaacataaaaaattggagtata 31549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 3778173 - 3778119
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||||||| ||||||||    
T  3778173 ccgtcccatattataagaa--agaaaaaattacacttattaagaaaaccaaaacata 3778119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 35887955 - 35888022
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||| ||||||||||||||  | |||| |  ||| ||||||||||| ||||||    
T  35887955 aaaaaatcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttg 35888022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 38260513 - 38260430
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||||  |||||||| | || ||||||||||||||||||| |||| ||||||||   | |||| | ||||||||||||||||    
T  38260513 ccgtcccgtattataagcaaaaaaaaaaatcacacttattaaaaaaattaaaacattgtagtttgtaatatagttttttgtgtt 38260430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 375
Target Start/End: Original strand, 19492391 - 19492441
Alignment:
Q  325 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||||||| ||||| |||||||  ||||||| ||||    
T  19492391 ttattaagaaaactaaaacataaaaatttagagtataactttttgtatttt 19492441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 22369384 - 22369330
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||||||||||||||||||||| ||   | |||| ||||||||||||||||||    
T  22369384 tcacacttattaagaaaactaaaatattgtagtttgtagtatagttttttgtgtt 22369330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 33153202 - 33153148
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||||||||| ||||| ||||||||| | |||| |||||| |||||||||||    
T  33153202 tcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgtt 33153148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 2633302 - 2633363
Alignment:
Q  293 tcccaaattataagaagaagaaaaaat-cacacttattaagaaaactaaaacataagaattt 353  Q
    |||||||||||||||| || ||  ||| |||| ||||||||||||||||||||||| |||||    
T  2633302 tcccaaattataagaaaaaaaaccaattcacatttattaagaaaactaaaacataataattt 2633363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 7041695 - 7041662
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||| |||||||||||||||||||||||||||    
T  7041695 aaaaaaacacacttattaagaaaactaaaacata 7041662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 11806600 - 11806629
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacat 345  Q
    ||||||||||||||||||||||||||||||    
T  11806600 aaatcacacttattaagaaaactaaaacat 11806629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 10248704 - 10248672
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacat 345  Q
    ||||||||||| |||||||||||||||||||||    
T  10248704 aaaaaatcacatttattaagaaaactaaaacat 10248672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 21542617 - 21542524
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21542617 ccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 21542524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 35129042 - 35129109
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35129042 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 35129109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 11082207 - 11082300
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11082207 ccgtcccaaattataagcaaaaaaacaaaaataacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 11082300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 34177629 - 34177696
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  34177629 aaaaatcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttgg 34177696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 7274863 - 7274930
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  7274863 aaaaatcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttgg 7274930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 17751734 - 17751797
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  17751734 aaatcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttcttt 17751797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 3095708 - 3095775
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  3095708 aaaaatcatatttattaagaaaactaaagcataaaaatttggagtatagttttttgtgttttctttgg 3095775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 9428919 - 9428857
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  9428919 aaaaaatcacatttattaataaaactaaaacataagaatttgaagtataattttttgtgtttt 9428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 5300574 - 5300658
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaa-aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||| | |||||||||||||||||| ||||||||||||||| |||||||||||||| || |||| | ||| |||| |||||||    
T  5300574 ccgtcctatattataagaagaagaaaaaaatcacacttattaaaaaaactaaaacataggagtttgtaatattgtttcttgtgtt 5300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 12461419 - 12461471
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagtttttt 368  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  12461419 aaatcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt 12461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 30794182 - 30794247
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||| | |||||||||||||||||| ||||||||||| |||||| |||||| |||||| |||||    
T  30794182 aaatcagatttattaagaaaactaaaatataagaatttgaagtataattttttatgttttatttgg 30794247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 14573118 - 14573181
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||||  ||||||| |||||||||    
T  14573118 aaatcacatttattaagaaaactaaaatatatgaatttggagtata-atttttgtattttctttg 14573181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 7359103 - 7359136
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||||||||||||    
T  7359103 aaaaaatcacacttattaagaaaactaaaacata 7359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 16524862 - 16524829
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||||||||||||    
T  16524862 aaaaaatcacacttattaagaaaactaaaacata 16524829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 4032161 - 4032129
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||||||||||||||||||||||||||||    
T  4032161 aaaaatcacacttattaagaaaactaaaacata 4032129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 346
Target Start/End: Complemental strand, 3888876 - 3888845
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||||||||||    
T  3888876 aaaatcacacttattaagaaaactaaaacata 3888845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 5121449 - 5121503
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||||||||    
T  5121449 tcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgtt 5121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 5822027 - 5822089
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||| || | | |||| |||||| ||| ||||||| |||||||    
T  5822027 tcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttgg 5822089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 12938442 - 12938349
Alignment:
Q  287 tccccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||| |||| | || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12938442 tccccgtcccaaattgtaagcaaaaaaaataatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttg 12938349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 35517296 - 35517229
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35517296 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 35517229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 28599134 - 28599202
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28599134 aaaaaattacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 28599202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 45085455 - 45085364
Alignment:
Q  290 ccgtcccaaattataaga-agaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||| ||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  45085455 ccgtcctaaattataagagagagaaaaaaatcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttg 45085364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 6110185 - 6110250
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctt 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6110185 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttctt 6110250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 3201526 - 3201432
Alignment:
Q  290 ccgtcccaaattataag---aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||   || ||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  3201526 ccgtcccaaattataagcaaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttgg 3201432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 9864707 - 9864773
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9864707 aaatcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttgg 9864773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 19264272 - 19264206
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19264272 aaaatcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttgg 19264206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 45660566 - 45660472
Alignment:
Q  290 ccgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataag---aatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||| ||| || || ||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  45660566 ccgtcccaaattaaaagcaaaaaaaaaaaatcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttg 45660472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 7645213 - 7645276
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  7645213 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttc 7645276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 11617198 - 11617131
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  11617198 aaaaaatcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttg 11617131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 25572218 - 25572151
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  25572218 aaaaatcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttgg 25572151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 35115792 - 35115851
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35115792 aaatcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttt 35115851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 40808707 - 40808774
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  40808707 aaaaatcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttgg 40808774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 8701800 - 8701708
Alignment:
Q  290 ccgtcccaaattataagaagaagaa-aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || || |||||||| |||||||||||||||||||||||| |||||| || |||||||||| ||||||||||||    
T  8701800 ccgtcccaaattataagcaaaaaaacaaaatcacgcttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttgg 8701708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 35023066 - 35023010
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35023066 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtttt 35023010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 41528431 - 41528363
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaa-cataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  41528431 aaaaaatcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttg 41528363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 33198617 - 33198683
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  33198617 aaaaaaacacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttcttt 33198683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 43415575 - 43415509
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  43415575 aaaaaatcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttcttt 43415509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 29524028 - 29524095
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| |||||||||| |||||||||||| || ||| |||||||||||||||||||    
T  29524028 aaaaatcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttgg 29524095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 6765922 - 6765987
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||| ||||    
T  6765922 aaatcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattgg 6765987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 24204518 - 24204583
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  24204518 aaatcacatttatcaagaaaactaaaacctaagaatttggagtataatttattgtgttttctttgg 24204583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 44455160 - 44455101
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  44455160 aaatcatatttattaagaaaactaaaatatatgaatttggagtatagttttttgtgtttt 44455101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 380
Target Start/End: Complemental strand, 32010286 - 32010209
Alignment:
Q  304 aagaagaagaaaaaat-cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||| ||||||||||||||||||||| |||||  | |||| | |||||||||||||||| ||||||    
T  32010286 aagaagaagaaaaaattcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttg 32010209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 28858486 - 28858416
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagta---tagttttttgtgttttctttg 380  Q
    |||||||||||| ||||||||||||||||||||||||||||  | ||   |||||||||||||||||||||    
T  28858486 aaaaaatcacacatattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttg 28858416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 5963362 - 5963308
Alignment:
Q  325 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||| |||||||||| |||| || |||||||||||||||||    
T  5963362 ttattaagaaaactaaaatataagaatttagagtctaattttttgtgttttcttt 5963308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 11825348 - 11825385
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaattt 353  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11825348 aaatcacacttattaagaaaactaaaacataagaattt 11825385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 30830582 - 30830649
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||| ||| |||||||||||| ||||||||||||| |||||||||   |||||||||||| ||||    
T  30830582 aaaaaattacatttattaagaaaattaaaacataagaaattggagtatgtctttttgtgttttttttg 30830649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 32428145 - 32428098
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagt 363  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||    
T  32428145 aaatcatatttattaaaaaaactaaaacataagaatttggagtatagt 32428098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 33677654 - 33677595
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||| ||||||| |||||||||||||||| |||||| || |||||||||| ||||||    
T  33677654 aaatcacgcttattacgaaaactaaaacataaaaatttgaagaatagttttttatgtttt 33677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 5280536 - 5280582
Alignment:
Q  333 aaaactaaaacataagaatttggagtatag-ttttttgtgttttctt 378  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5280536 aaaactaaaacataagaatttggactatagtttttttgtgttttctt 5280582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 16492925 - 16492958
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||||||||||||    
T  16492925 aaaaaatcacacttattaagaaaactaaaacata 16492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 14874105 - 14874070
Alignment:
Q  345 taagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttg 14874070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 33932915 - 33932966
Alignment:
Q  319 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgt 370  Q
    ||||||||||||||||||||||||||||  | |||| |||||| ||||||||    
T  33932915 tcacacttattaagaaaactaaaacatagtattttgtagtataattttttgt 33932966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 4707585 - 4707532
Alignment:
Q  320 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 376  Q
    |||| |||||||||| |||||||||| |   ||||||||||||||||||||||||||    
T  4707585 cacatttattaagaacactaaaacatga---tttggagtatagttttttgtgttttc 4707532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 26998491 - 26998425
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||| |||||||||||||||||||||   | |||| |  ||||||||||||||| |||||    
T  26998491 aaaaaatcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatcttt 26998425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 38071192 - 38071102
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||| |||||||| | || ||||||  ||| |||||||||||||||||||||   | |||| |  ||||||||||||||| ||||||    
T  38071192 ccgtcccatattataagcaaaaaaaaaaaaaacagttattaagaaaactaaaacatggtagtttgtaacatagttttttgtgttatctttg 38071102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 20386797 - 20386764
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||| ||||||||    
T  20386797 aaaaaatcacacttattaagaaaaccaaaacata 20386764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 23986985 - 23987050
Alignment:
Q  292 gtcccaaattataagaagaagaaaaaa----tcacacttattaagaaaactaaaacataagaattt 353  Q
    ||||||||||||||| | || ||||||    ||| ||||||||||||||||||||||||| |||||    
T  23986985 gtcccaaattataaggaaaaaaaaaaacatttcatacttattaagaaaactaaaacataataattt 23987050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 9264749 - 9264662
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||| ||   |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  9264749 ccgtcccaaattataagaaaaa---aaaatcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttg 9264662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 35963330 - 35963262
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35963330 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttgtttgg 35963262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 11054232 - 11054325
Alignment:
Q  290 ccgtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||  || ||  |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11054232 ccgtcccaaattataagcaaacaaacaaaaatcatacttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgg 11054325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 37042338 - 37042431
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| | || ||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  37042338 ccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttgg 37042431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 14752154 - 14752222
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14752154 aaaaaatcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttgg 14752222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 29235371 - 29235299
Alignment:
Q  307 aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  29235371 aagaaaaaaaaatcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttcttt 29235299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 46711604 - 46711671
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  46711604 aaaaaatcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttg 46711671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 50650983 - 50651050
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  50650983 aaaaaatcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttg 50651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 380
Target Start/End: Complemental strand, 30189748 - 30189682
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  30189748 aaaaatcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttg 30189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 47864394 - 47864302
Alignment:
Q  290 ccgtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||| ||||||||||  || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  47864394 ccgtcctaaattataagcaaaaaagaaaaaatcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttg 47864302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 31837093 - 31837029
Alignment:
Q  317 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  31837093 aatcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttgg 31837029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 41476281 - 41476349
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaa-cataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  41476281 aaaaaatcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttg 41476349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 7866429 - 7866496
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  7866429 aaaaaatcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttg 7866496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 8703306 - 8703220
Alignment:
Q  292 gtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttt-tgtgtttt 375  Q
    |||||||||||||||  || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  8703306 gtcccaaattataagcaaataaaaaaaaatcacacttattaaaaaaactaaaacataagaatttggagtatagtttttgtgtgtttt 8703220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 9055193 - 9055107
Alignment:
Q  292 gtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttt-tgtgtttt 375  Q
    |||||||||||||||  || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9055193 gtcccaaattataagcaaataaaaaaaaatcacacttattaaaaaaactaaaacataagaatttggagtatagtttttgtgtgtttt 9055107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 23311516 - 23311606
Alignment:
Q  290 ccgtcccaaattataagaagaaga-aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||| || | |||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  23311516 ccgtcccaaattataagaaaaaaacaaaaatcaca-ttattaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttg 23311606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 23910459 - 23910526
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  23910459 aaaaaatcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttg 23910526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 26208189 - 26208130
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26208189 aaatcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgtttt 26208130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 26724914 - 26725005
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||| ||| || || ||||| ||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  26724914 ccgtcccaaattgtaaaaaaaaaaaaaattcatacttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttgg 26725005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 6075284 - 6075191
Alignment:
Q  290 ccgtcccaaattataag--aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||| ||||||||||||  || || ||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  6075284 ccgttccaaattataagcaaaaaataaagaatcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttgg 6075191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 19464281 - 19464186
Alignment:
Q  290 ccgtcccaaattataag---aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggag--tatagttttttgtgttttctttg 380  Q
    |||||||||||||||||   || || |||||| |||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  19464281 ccgtcccaaattataagcaaaaaaataaaaaaccacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttg 19464186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 28875603 - 28875516
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||| ||||||||||||||    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  28875603 ccgttccaaattataagaa----aaaaaatcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttgg 28875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 36546738 - 36546652
Alignment:
Q  296 caaattataagaagaagaaaaaat-cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||| | || ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  36546738 caaattataagcaaaaaaaaaaattcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttgg 36546652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 36561577 - 36561663
Alignment:
Q  296 caaattataagaagaagaaaaaat-cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||| | || ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  36561577 caaattataagcaaaaaaaaaaattcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttgg 36561663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 37075159 - 37075070
Alignment:
Q  294 cccaaattataagaa--gaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||  ||| ||||||| | ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  37075159 cccaaattataagaaatgaaaaaaaaatgatacttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttgg 37075070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 54464842 - 54464908
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  54464842 aaaaaatcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt 54464908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 50730287 - 50730218
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagtt-ttttgtgttttctttgg 381  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  50730287 aaaaaatcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttgg 50730218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 50782567 - 50782636
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctttgg 381  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  50782567 aaaaaatcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttgg 50782636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 8769506 - 8769587
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||||||||| ||||||    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  8769506 ccgtcccaaattgtaagaa----aaaaaatcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttt 8769587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 53270412 - 53270346
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  53270412 aaaaaatcacactcattaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttg 53270346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 8764625 - 8764687
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||    
T  8764625 aaaaaatcacacttattaaaaaaactaaaacataacaattaggagtatagctttttgtgtttt 8764687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 2927467 - 2927399
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctttgg 381  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||| |||||||| ||||||||||    
T  2927467 aaaaatcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttgg 2927399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 33973512 - 33973579
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttcttt 379  Q
    ||||| ||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||||    
T  33973512 aaaaactcacacttattaacaaaactaaaatataaaaatttggagtatagtttttttgtgttttcttt 33973579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 579091 - 579133
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttgg 355  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  579091 aaaaaatcacacttattaagaaaactaaaacataagaatttgg 579133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 47116024 - 47115966
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttt 374  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  47116024 aaatcacatttattaaaaaaactaaaacataagaatttagagtataattttttgtgttt 47115966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 25242101 - 25242190
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||| |||||||| | || ||| ||||||||||||||||||||||||||||||  | |||| |  ||||||||||||||| |||||    
T  25242101 ccgtcccatattataagcaaaaaaaataatcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatcttt 25242190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 47866873 - 47866921
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagtt 364  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||    
T  47866873 aaatcacacttattaaaaagactaaaacataagaatttggagtatagtt 47866921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 10115105 - 10115050
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||| |||||||||| || ||||| ||||||||||||||||||||||||||||    
T  10115105 ccgtcccatattataagaaaaataaaaa-tcacacttattaagaaaactaaaacata 10115050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 54725543 - 54725627
Alignment:
Q  290 ccgtcccaaattataagaagaagaa-aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||| | |||||||||| || || |||||||||||||||||||||||||||||||| || |||| | ||| |||| |||||||    
T  54725543 ccgtcctatattataagaaaaaaaagaaaatcacacttattaagaaaactaaaacataggagtttgtaatattgtttcttgtgtt 54725627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 2994338 - 2994421
Alignment:
Q  291 cgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    ||||||| |||||||| || || |||||||||||||||||||||||||||||| |||  | |||| |  |||||||||||||||    
T  2994338 cgtcccatattataagcaaaaaaaaaaaatcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtt 2994421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 6438229 - 6438194
Alignment:
Q  345 taagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttg 6438194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 22479000 - 22479067
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||| |||||||||||||||||||||||||  | |||| |  ||||||||||||||| ||||||    
T  22479000 aaaaaatcgcacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttg 22479067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 47599646 - 47599583
Alignment:
Q  290 ccgtcccaaattataag-aagaagaaaaaatcacacttattaagaaaactaaaacataagaatt 352  Q
    ||||||||||||||||| || || ||||||| ||||||||||| ||||||||||||||| ||||    
T  47599646 ccgtcccaaattataagcaaaaaaaaaaaattacacttattaaaaaaactaaaacataaaaatt 47599583  T

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Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 46557091 - 46557156
Alignment:
Q  290 ccgtcccaaattataagaagaagaa--aaaatcacacttattaagaaaactaaaacataagaattt 353  Q
    |||| |||||||||||||| || ||  ||||||||| ||||||||||||||||| |||||||||||    
T  46557091 ccgttccaaattataagaaaaaaaataaaaatcacatttattaagaaaactaaagcataagaattt 46557156  T

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Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 8096964 - 8096997
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||||||||||||    
T  8096964 aaaaaatcacacttattaagaaaactaaaacata 8096997  T

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Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 20847219 - 20847282
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||| || |||| |||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  20847219 aaatcacaattgttaa-aaaattaaaacataagaatttggagtata-atttttgtgttttctttgg 20847282  T

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Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 32619787 - 32619844
Alignment:
Q  325 ttattaagaaaactaa-aacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||||    
T  32619787 ttattaagaaaactatgaacatgagaatttggagtataatattttgtgttttctttgg 32619844  T

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Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 34195060 - 34195027
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||||||||||||    
T  34195060 aaaaaatcacacttattaagaaaactaaaacata 34195027  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 6784807 - 6784763
Alignment:
Q  299 attataagaagaagaaaaaa-tcacacttattaagaaaactaaaa 342  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  6784807 attataagaagaagaaaaaaatcacatttattaagaaaactaaaa 6784763  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 10014440 - 10014408
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||||||||||||||||||||||||||||    
T  10014440 aaaaatcacacttattaagaaaactaaaacata 10014408  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 10252182 - 10252150
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||||||||||||||||||||||||||||    
T  10252182 aaaaatcacacttattaagaaaactaaaacata 10252150  T

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Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 346
Target Start/End: Complemental strand, 38401554 - 38401523
Alignment:
Q  315 aaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||||||||||||||||||||||||||    
T  38401554 aaaatcacacttattaagaaaactaaaacata 38401523  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 47443920 - 47443987
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||| |||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||||||    
T  47443920 aaaaaaacacatttattaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttg 47443987  T

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Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 346
Target Start/End: Complemental strand, 32070371 - 32070337
Alignment:
Q  312 gaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||||||||||||||| ||||||||||||||    
T  32070371 gaaaaaatcacacttattaaaaaaactaaaacata 32070337  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 381
Target Start/End: Complemental strand, 2878253 - 2878212
Alignment:
Q  340 aaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||||||||| || |||||||||||||||| |||||||    
T  2878253 aaacataagaatttagaatatagttttttgtgttatctttgg 2878212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 6752856 - 6752799
Alignment:
Q  291 cgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataag 348  Q
    ||||||||||| |||||| || |  |||||||||||||||| |||||||||| |||||    
T  6752856 cgtcccaaattgtaagaaaaaaatcaaatcacacttattaaaaaaactaaaagataag 6752799  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 29676463 - 29676496
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    ||||||||| ||||||||||||||||||||||||    
T  29676463 aaaaaatcaaacttattaagaaaactaaaacata 29676496  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 41935863 - 41935900
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaattt 353  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  41935863 aaatcacacttattaacaaaactaaaacaaaagaattt 41935900  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 22455954 - 22456014
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||||||||  |||||||||||||||||||||  | |||| |  |||||||||||||||    
T  22455954 aaaaaatcacaaatattaagaaaactaaaacatagtagtttgtaacatagttttttgtgtt 22456014  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 30454649 - 30454704
Alignment:
Q  290 ccgtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||| |||||||| | || ||||||| |||||||| |||||||||||||||||    
T  30454649 ccgtcccatattataagcaaaaaaaaaaatgacacttat-aagaaaactaaaacata 30454704  T

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Target: scaffold0045 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 78131 - 78064
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  78131 aaaaaatcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttg 78064  T

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Target: scaffold0300 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 565 - 627
Alignment:
Q  318 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  565 atcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttg 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 44758 - 44826
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  44758 aaaaaatcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttgg 44826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 1207 - 1124
Alignment:
Q  292 gtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||| ||||||||||||| ||||||||||| ||||||  |||||||||| |||| |||||||||||||||||||||||||||    
T  1207 gtcccagattataagaagaaaaaaaaatcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttt 1124  T

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Target: scaffold0132; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 9167 - 9084
Alignment:
Q  292 gtcccaaattataagaagaagaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||| ||||||||||||| ||||||||||| ||||||  |||||||||| |||| |||||||||||||||||||||||||||    
T  9167 gtcccagattataagaagaaaaaaaaatcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttt 9084  T

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Target: scaffold0442 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 10243 - 10153
Alignment:
Q  290 ccgtcccaaattataagaagaagaaa-aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||| |||||||||||| || ||| |||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  10243 ccgtcctaaattataagaaaaaaaaataaatcatacttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttcttt 10153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 157967 - 157900
Alignment:
Q  314 aaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 381  Q
    |||||||| ||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  157967 aaaaatcatacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttgg 157900  T

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Target: scaffold0565 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 5862 - 5922
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 373  Q
    |||||||||||||||||||||||| |||||||||  | |||| | ||||||||||||||||    
T  5862 aaaaaatcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgtt 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 3342 - 3275
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    |||||||||||||||||||||||| |||||||||  | |||| |  ||||||||||||||| ||||||    
T  3342 aaaaaatcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttg 3275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 379
Target Start/End: Original strand, 3447 - 3481
Alignment:
Q  345 taagaatttggagtatagttttttgtgttttcttt 379  Q
    |||||||||||||||||||||||||||||||||||    
T  3447 taagaatttggagtatagttttttgtgttttcttt 3481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 155022 - 154968
Alignment:
Q  325 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 380  Q
    ||||||||||||||||||||||||||| || | ||||| ||||||| |||||||||    
T  155022 ttattaagaaaactaaaacataagaatctgaaatatag-tttttgtattttctttg 154968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 233477 - 233536
Alignment:
Q  316 aaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 375  Q
    |||||||| |||||||||||||||||| ||||||||||    ||||||| ||||||||||    
T  233477 aaatcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttt 233536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 160906 - 160939
Alignment:
Q  313 aaaaaatcacacttattaagaaaactaaaacata 346  Q
    |||||||||||||||||||||||| |||||||||    
T  160906 aaaaaatcacacttattaagaaaattaaaacata 160939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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