View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1420_low_37 (Length: 253)

Name: NF1420_low_37
Description: NF1420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1420_low_37
NF1420_low_37
[»] chr3 (33 HSPs)
chr3 (131-253)||(42067862-42067984)
chr3 (130-253)||(29786533-29786656)
chr3 (124-253)||(46959836-46959964)
chr3 (145-253)||(35171206-35171313)
chr3 (145-253)||(47948407-47948514)
chr3 (130-253)||(11140530-11140651)
chr3 (129-253)||(876221-876344)
chr3 (153-253)||(40650355-40650454)
chr3 (129-253)||(42363927-42364050)
chr3 (145-253)||(42848205-42848312)
chr3 (129-253)||(44365893-44366016)
chr3 (153-253)||(31309163-31309262)
chr3 (130-253)||(38785082-38785204)
chr3 (129-253)||(45636372-45636496)
chr3 (131-253)||(44670260-44670380)
chr3 (130-208)||(29347311-29347389)
chr3 (130-205)||(39629948-39630023)
chr3 (145-241)||(378618-378712)
chr3 (192-253)||(4660039-4660099)
chr3 (130-191)||(37492241-37492302)
chr3 (132-253)||(52082045-52082164)
chr3 (128-216)||(37520700-37520788)
chr3 (128-174)||(4663144-4663190)
chr3 (129-174)||(788472-788517)
chr3 (128-213)||(1129127-1129212)
chr3 (130-174)||(19547851-19547895)
chr3 (129-213)||(40478081-40478165)
chr3 (129-180)||(29806365-29806416)
chr3 (206-253)||(37492201-37492247)
chr3 (127-213)||(42479008-42479094)
chr3 (129-174)||(27647842-27647887)
chr3 (129-209)||(9252180-9252260)
chr3 (130-174)||(21288813-21288857)
[»] chr5 (31 HSPs)
chr5 (130-253)||(13410825-13410948)
chr5 (153-253)||(21605933-21606033)
chr5 (130-253)||(32467327-32467449)
chr5 (126-253)||(3056680-3056806)
chr5 (128-253)||(1661690-1661814)
chr5 (165-253)||(6113808-6113896)
chr5 (130-253)||(34302932-34303054)
chr5 (133-253)||(6561110-6561229)
chr5 (128-253)||(36338843-36338967)
chr5 (145-253)||(9535151-9535258)
chr5 (145-253)||(18228475-18228582)
chr5 (130-253)||(42917402-42917524)
chr5 (129-253)||(43237354-43237477)
chr5 (126-253)||(6532864-6532990)
chr5 (128-253)||(2141526-2141650)
chr5 (129-253)||(24098154-24098277)
chr5 (161-253)||(2414208-2414299)
chr5 (161-253)||(6318317-6318408)
chr5 (165-253)||(2029637-2029724)
chr5 (126-253)||(13091198-13091323)
chr5 (130-253)||(22780797-22780919)
chr5 (129-253)||(14967516-14967638)
chr5 (131-209)||(29744229-29744307)
chr5 (129-216)||(36427904-36427991)
chr5 (139-174)||(2318434-2318469)
chr5 (131-174)||(3425090-3425133)
chr5 (134-209)||(9589535-9589610)
chr5 (131-209)||(39816506-39816584)
chr5 (129-174)||(28332484-28332529)
chr5 (132-220)||(479676-479764)
chr5 (129-173)||(12362356-12362400)
[»] chr8 (29 HSPs)
chr8 (129-253)||(29459918-29460042)
chr8 (126-253)||(37511372-37511499)
chr8 (129-253)||(34332396-34332518)
chr8 (126-253)||(15725886-15726012)
chr8 (128-253)||(44935183-44935306)
chr8 (129-253)||(28090475-28090597)
chr8 (129-253)||(29773729-29773851)
chr8 (127-253)||(946253-946380)
chr8 (145-253)||(14498319-14498426)
chr8 (129-252)||(29229175-29229298)
chr8 (130-253)||(23274907-23275030)
chr8 (131-253)||(23286849-23286970)
chr8 (151-253)||(39171103-39171203)
chr8 (133-253)||(12162943-12163063)
chr8 (133-253)||(12407371-12407491)
chr8 (145-253)||(38502475-38502581)
chr8 (145-253)||(10280844-10280951)
chr8 (163-253)||(37161792-37161881)
chr8 (129-234)||(39170997-39171103)
chr8 (154-249)||(23275078-23275173)
chr8 (169-253)||(36002643-36002726)
chr8 (130-253)||(17642358-17642479)
chr8 (133-209)||(2273336-2273412)
chr8 (130-213)||(29454143-29454226)
chr8 (132-173)||(43485053-43485094)
chr8 (129-216)||(10706554-10706641)
chr8 (130-216)||(29265589-29265675)
chr8 (131-220)||(38329452-38329541)
chr8 (126-174)||(26439505-26439553)
[»] chr7 (27 HSPs)
chr7 (129-253)||(28327350-28327474)
chr7 (153-253)||(3910214-3910314)
chr7 (129-253)||(41913095-41913217)
chr7 (130-253)||(42711214-42711335)
chr7 (145-253)||(30863077-30863184)
chr7 (133-248)||(41381771-41381886)
chr7 (128-253)||(38129383-38129507)
chr7 (153-253)||(30623743-30623842)
chr7 (130-230)||(27956591-27956691)
chr7 (128-253)||(40942160-40942284)
chr7 (145-253)||(21699307-21699414)
chr7 (145-242)||(1691008-1691104)
chr7 (132-203)||(45461660-45461731)
chr7 (129-253)||(30936093-30936215)
chr7 (130-253)||(8770370-8770491)
chr7 (130-253)||(45857475-45857596)
chr7 (129-174)||(18990450-18990495)
chr7 (126-174)||(43750437-43750485)
chr7 (128-175)||(34118831-34118878)
chr7 (130-209)||(44963823-44963902)
chr7 (126-212)||(26605052-26605138)
chr7 (126-223)||(30891570-30891667)
chr7 (139-174)||(20438825-20438860)
chr7 (218-253)||(45458850-45458885)
chr7 (131-213)||(23406653-23406735)
chr7 (129-210)||(15954587-15954668)
chr7 (131-216)||(35291327-35291412)
[»] chr1 (47 HSPs)
chr1 (129-253)||(23056984-23057108)
chr1 (129-253)||(23061285-23061409)
chr1 (129-253)||(35305435-35305559)
chr1 (129-253)||(6519986-6520109)
chr1 (130-253)||(51369601-51369724)
chr1 (128-253)||(921840-921964)
chr1 (129-253)||(5956525-5956649)
chr1 (126-253)||(8461523-8461649)
chr1 (130-253)||(37499027-37499148)
chr1 (14-129)||(51720535-51720647)
chr1 (145-253)||(18642153-18642260)
chr1 (137-253)||(28494055-28494169)
chr1 (149-253)||(52303297-52303400)
chr1 (128-253)||(39971267-39971391)
chr1 (128-253)||(51985219-51985343)
chr1 (145-253)||(45423899-45424006)
chr1 (145-253)||(23459564-23459671)
chr1 (153-253)||(39190586-39190685)
chr1 (145-253)||(46770746-46770853)
chr1 (153-253)||(45673601-45673700)
chr1 (153-253)||(50905863-50905962)
chr1 (145-253)||(51520098-51520205)
chr1 (169-253)||(38262172-38262255)
chr1 (147-253)||(43306817-43306921)
chr1 (131-253)||(26102474-26102595)
chr1 (128-209)||(50239275-50239356)
chr1 (173-253)||(29106408-29106486)
chr1 (186-246)||(16482867-16482926)
chr1 (131-174)||(26010943-26010986)
chr1 (131-174)||(51977859-51977902)
chr1 (127-213)||(12105157-12105243)
chr1 (145-253)||(23304693-23304798)
chr1 (128-209)||(51184366-51184447)
chr1 (132-216)||(34038163-34038247)
chr1 (129-213)||(48976874-48976958)
chr1 (130-173)||(632648-632691)
chr1 (130-209)||(7122282-7122361)
chr1 (130-213)||(46641840-46641923)
chr1 (129-216)||(52345598-52345685)
chr1 (130-180)||(12178955-12179005)
chr1 (132-173)||(2247408-2247449)
chr1 (127-172)||(2621043-2621088)
chr1 (159-216)||(42275364-42275421)
chr1 (145-174)||(42316850-42316879)
chr1 (130-210)||(14152687-14152767)
chr1 (130-210)||(25702435-25702515)
chr1 (130-174)||(33910052-33910096)
[»] chr2 (19 HSPs)
chr2 (129-253)||(4673600-4673724)
chr2 (129-253)||(37083494-37083618)
chr2 (126-253)||(11813188-11813315)
chr2 (127-253)||(34665855-34665979)
chr2 (127-253)||(5389199-5389323)
chr2 (131-253)||(1353791-1353911)
chr2 (139-253)||(15771318-15771431)
chr2 (132-253)||(3810452-3810572)
chr2 (128-253)||(14532822-14532946)
chr2 (153-244)||(6884454-6884545)
chr2 (130-253)||(59202-59325)
chr2 (130-253)||(3383191-3383314)
chr2 (145-253)||(42427583-42427690)
chr2 (132-251)||(11227914-11228031)
chr2 (128-253)||(33423032-33423156)
chr2 (131-253)||(38963068-38963190)
chr2 (131-174)||(37909720-37909763)
chr2 (129-213)||(25331454-25331538)
chr2 (145-209)||(12547694-12547758)
[»] chr4 (35 HSPs)
chr4 (129-253)||(11109595-11109720)
chr4 (127-253)||(55722762-55722886)
chr4 (129-253)||(48578906-48579028)
chr4 (165-253)||(14802996-14803084)
chr4 (130-253)||(47302264-47302386)
chr4 (131-253)||(41759660-41759780)
chr4 (132-253)||(37855405-37855526)
chr4 (129-253)||(3716609-3716732)
chr4 (145-253)||(33075994-33076102)
chr4 (145-253)||(30539844-30539951)
chr4 (145-253)||(34280239-34280346)
chr4 (125-253)||(38836134-38836261)
chr4 (126-253)||(37518961-37519087)
chr4 (126-253)||(37523177-37523303)
chr4 (128-253)||(52592077-52592201)
chr4 (130-253)||(28037969-28038091)
chr4 (129-253)||(51435811-51435935)
chr4 (145-253)||(46041985-46042092)
chr4 (132-244)||(30343120-30343232)
chr4 (153-253)||(27539201-27539300)
chr4 (126-253)||(43137367-43137493)
chr4 (151-253)||(53388867-53388968)
chr4 (128-253)||(52589356-52589480)
chr4 (131-253)||(9858534-9858654)
chr4 (132-209)||(31908769-31908846)
chr4 (131-209)||(36091385-36091463)
chr4 (133-209)||(51282262-51282338)
chr4 (130-174)||(53695386-53695430)
chr4 (130-220)||(23058765-23058855)
chr4 (128-174)||(31681548-31681594)
chr4 (130-216)||(42177342-42177428)
chr4 (132-213)||(24979944-24980024)
chr4 (159-216)||(30348192-30348249)
chr4 (159-220)||(50383358-50383419)
chr4 (130-174)||(46215772-46215816)
[»] chr6 (16 HSPs)
chr6 (153-253)||(24487308-24487408)
chr6 (129-248)||(2259194-2259311)
chr6 (153-253)||(13390672-13390771)
chr6 (145-253)||(17545888-17545994)
chr6 (126-253)||(24213196-24213322)
chr6 (127-253)||(4110839-4110964)
chr6 (129-253)||(32833773-32833896)
chr6 (129-253)||(6848793-6848921)
chr6 (126-253)||(1096501-1096626)
chr6 (130-253)||(8401414-8401539)
chr6 (153-253)||(26358575-26358674)
chr6 (129-213)||(33574676-33574760)
chr6 (129-213)||(33574854-33574938)
chr6 (131-174)||(15383204-15383247)
chr6 (130-173)||(34195879-34195922)
chr6 (186-220)||(18772176-18772210)
[»] scaffold0077 (2 HSPs)
scaffold0077 (129-253)||(48294-48416)
scaffold0077 (129-177)||(58123-58171)
[»] scaffold0005 (1 HSPs)
scaffold0005 (165-253)||(36643-36731)
[»] scaffold0283 (1 HSPs)
scaffold0283 (128-253)||(6523-6646)
[»] scaffold0625 (1 HSPs)
scaffold0625 (129-174)||(6265-6310)
[»] scaffold0604 (1 HSPs)
scaffold0604 (145-174)||(2382-2411)
[»] scaffold0113 (1 HSPs)
scaffold0113 (129-174)||(29607-29652)


Alignment Details
Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 42067984 - 42067862
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 230  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42067984 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 42067885  T
Q  231 gttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||    
T  42067884 gttgacatatatattttagaaaa 42067862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 29786533 - 29786656
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  29786533 gggaacttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataagtgtt 29786632  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||    
T  29786633 tgttgacatatatattttagaaaa 29786656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 124 - 253
Target Start/End: Complemental strand, 46959964 - 46959836
Alignment:
Q  124 agattagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaatt 223  Q
    |||| ||||||||| ||||| ||||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||     
T  46959964 agataagggaacttttacggtacacctgcaaattacggtgtatcggtactctcgcttacaacttttataaattaactatcattttttatg-aagaaaata 46959866  T
Q  224 ggtgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||||    
T  46959865 ggtgtttgttgacatatatattttagaaaa 46959836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 35171206 - 35171313
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  35171206 acacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 35171304  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  35171305 tttagaaaa 35171313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 47948407 - 47948514
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  47948407 acacccgtaaatgacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 47948505  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  47948506 tttagaaaa 47948514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 11140651 - 11140530
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||| |||| |||| ||||||    
T  11140651 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaacaaactatcattttttataaaag-aaataggtgtt 11140554  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||    
T  11140553 tgttgacatatatattttagaaaa 11140530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 876221 - 876344
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||||||| | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| | |||    
T  876221 agggaacttctacggtacacccgcaaattacgatgtactggtactctcgcttataatttttataatttaactatcattttttatg-aagaaaatagttgt 876319  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  876320 ttgttgacatatatattttagaaaa 876344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 40650454 - 40650355
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  40650454 aaattacggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatattttagaaa 40650356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 42363927 - 42364050
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||||| |||||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||| |||||    
T  42363927 agggaacttctacggtacacctgcaaattacggtgtatcggtactctagcttacaatttttataatttaactataattttttatgaaa-aaaataggtgt 42364025  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  42364026 ttgttgacatatatattttagaaaa 42364050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 42848205 - 42848312
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  42848205 acacccgtaaatgacggtgtaccggtactcccgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 42848303  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  42848304 tttagaaaa 42848312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 44366016 - 44365893
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtg 227  Q
    ||||||||| || || ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||||    
T  44366016 agggaacttctatggtacacccgtaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaag-aaataggtg 44365919  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||| ||||    
T  44365918 tttgttgacatatatattttaaaaaa 44365893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 31309262 - 31309163
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  31309262 aaattacggtgtaccggtactctcggttacaatttttataaattaactataattttttatg-aagaaaataggtgtttgttgacatatatattttagaaa 31309164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 38785082 - 38785204
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaa-tttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    |||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| | |||||||| |||||||| |||||    
T  38785082 gggaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaattttttataaattaactat-aatttttatg-aagaaaataggtgt 38785179  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  38785180 ttgttgacatatatattttagaaaa 38785204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 45636496 - 45636372
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||| || |||||||  | ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |    
T  45636496 agggaacttctacggtacactcgtaaattaaaatatactggtacactcgcttataatttttataaattaactatcattttttatgaaagaaaataggtat 45636397  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  45636396 ttgttgacatatatattttagaaaa 45636372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 44670260 - 44670380
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 230  Q
    ||||||| ||||| ||| ||| |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||    
T  44670260 ggaacttctacggtacatccgtaaattaaggtgtgccggtactttcgcttaca-tttttataaattaactatcattttttatgaaag-aaataagtgttt 44670357  T
Q  231 gttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||    
T  44670358 gttgacatatatattttagaaaa 44670380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 29347311 - 29347389
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatttt 208  Q
    |||||||| ||||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29347311 gggaacttctacggtacacccgcaaattgcagtgtaccggtactctcgcttacaatttttataaattaactatcatttt 29347389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 39629948 - 39630023
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcat 205  Q
    |||||||| ||||| ||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  39629948 gggaacttctacggtacatccgcaaattaagatgtaccggtactatcgcttacaatttttataaattaactatcat 39630023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 378618 - 378712
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatata 241  Q
    ||||||| ||||||  ||||||||||||  || |||  ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  378618 acacccgtaaattacagtgtaccggtaccatcacttt-aatttttataaattaactatcattttttatg-aagaaaataagtgtttgttgacatata 378712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 4660099 - 4660039
Alignment:
Q  192 aaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||    
T  4660099 aaattaactatcattttttatgaaa-aaaatagctgtttgttgacatatatattttaaaaaa 4660039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 37492302 - 37492241
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttat 191  Q
    |||||||| ||||| ||| |||||||||| |||||||||||||||||||||| |||||||||    
T  37492302 gggaacttctacggtacatccgcaaattacggtgtaccggtactctcgcttataatttttat 37492241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 52082045 - 52082164
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttg 231  Q
    |||||| ||||| |||||||||||||||||||||||||||||||  |||  ||  ||||||||| |||||| | ||||||||||| ||||  | | ||||    
T  52082045 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaatgaactatta-tttttatgaaataaaa-agttatttg 52082142  T
Q  232 ttgacatatatattttagaaaa 253  Q
    |||| || ||||||||||||||    
T  52082143 ttgatatttatattttagaaaa 52082164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 37520700 - 37520788
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    |||||||||| ||||| |||| | |||| | |||||||||||||||||  |||   | |||||||||||||| ||||||||||||||||    
T  37520700 tagggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaa 37520788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 4663144 - 4663190
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  4663144 tagggaacttctacggtacatccgcaaattaaggtgtaccggtactc 4663190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 788472 - 788517
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||    
T  788472 agggaatttttacggtacacccgcaaattaaggtgtaccggtactc 788517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 1129127 - 1129212
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    |||||||||| ||||| |||| | |||| | ||||||||||||||||  ||||   | |||||||||||||| |||||||||||||    
T  1129127 tagggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatg 1129212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 19547895 - 19547851
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||    
T  19547895 gggaacttctacggtacacccacaaattaaggtgtaccggtactc 19547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 40478165 - 40478081
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||| ||||| |||| | |||| | ||||||||||||||||  ||||   | |||||||||||||| |||||||||||||    
T  40478165 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatg 40478081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 29806416 - 29806365
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgctt 180  Q
    ||||||||| ||||| |||| |||||||| ||||||||||||||||| ||||    
T  29806416 agggaacttctacggtacactcgcaaattgaggtgtaccggtactcttgctt 29806365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 37492247 - 37492201
Alignment:
Q  206 tttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  37492247 tttttatgaa-gaaaataggtgtttgttgacatatatattttaaaaaa 37492201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 42479094 - 42479008
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||||| ||||| |||  | |||| ||||||||||||||||||| | ||   | |||||||||||||| || ||||||||||    
T  42479094 ttagggaacttctacggtacattcacaaaataaggtgtaccggtactcttgtttcataattttataaattaacgataattttttatg 42479008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 27647887 - 27647842
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||||| ||||| |||||||||||||||||||||  |||||||    
T  27647887 agggaacttctacggtacacccgcaaattaaggtgtattggtactc 27647842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 9252260 - 9252180
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    ||||||||| ||||| |||| || ||||| ||||||||||||||||| ||||   || | ||||||||||| |||| ||||    
T  9252260 agggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcatatatctataaattaacgatcaatttt 9252180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 21288813 - 21288857
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||| || ||||| ||||||||||||||||||||| ||||||||    
T  21288813 gggaatttctacggtacacccgcaaattaaggtgtatcggtactc 21288857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 13410948 - 13410825
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13410948 gggaacttctacggtacatccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 13410849  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||    
T  13410848 tgttgacatatatattttagaaaa 13410825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 21606033 - 21605933
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21606033 aaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 21605934  T
Q  253 a 253  Q
    |    
T  21605933 a 21605933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 32467449 - 32467327
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||    
T  32467449 gggaacttctacggtacacccgcaaattacggtgtaccggtactctcgcttgcaatttttataaattaactatcattttttatg-aagaaaataggtgtt 32467351  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||| ||||||    
T  32467350 tgttgacatatatatttcagaaaa 32467327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 3056806 - 3056680
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    ||||||| |||| || || |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  3056806 attaggggacttctatggtacactcgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaatagg 3056708  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  3056707 tgtttgttgacatatatattttagaaaa 3056680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 1661690 - 1661814
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    ||||| ||||||| || ||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  1661690 taggggacttatatggtacacctgtaaattacggtgtaccggtgctctcgcttacaatttttataaattaactatcattttttatgaaa-aaaataggtg 1661788  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  1661789 tttgttgacatatatattttagaaaa 1661814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 6113808 - 6113896
Alignment:
Q  165 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6113808 accggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 6113896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 34303054 - 34302932
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| ||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  34303054 gggaacttctacggtacacctgcaaattacggtgtaccggtactctcacttataatttttataaattaactataattttttatgaaa-aaaataggtgtt 34302956  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||    
T  34302955 tgttgacatatatattttagaaaa 34302932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 6561229 - 6561110
Alignment:
Q  133 aacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgt 232  Q
    ||||| ||||| ||||| |||||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  6561229 aacttctacggtacacctgcaaattacggtgtaccggtattcttgcttacaatttttataaattaactataattttttatg-aagaaaataggtgtttgt 6561131  T
Q  233 tgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||    
T  6561130 tgacatatatattttagaaaa 6561110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 36338843 - 36338967
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    ||||| |||| || || ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  36338843 taggggacttctatggtacacccgtaaattacggtgtaccagtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtg 36338941  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||| |||||||| |||||    
T  36338942 tttgttgacatgtatattttggaaaa 36338967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 9535258 - 9535151
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  9535258 acacccgtaaattaaagtgtaacggtactctcacttacaatttttataaattaactatcattttttatg-aagaaaataagtgtttgttgacatatatat 9535160  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  9535159 tttagaaaa 9535151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 18228475 - 18228582
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  18228475 acacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatg-aagaaaatacgtgtttgttgacatatatat 18228573  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  18228574 tttagaaaa 18228582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 42917524 - 42917402
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtgt 228  Q
    |||||||| || || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  42917524 gggaacttttatggtacacccacaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaag-aaataggtgt 42917427  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    ||||||| |||||||||||||||||    
T  42917426 ttgttgaaatatatattttagaaaa 42917402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 43237354 - 43237477
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| || || ||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||    
T  43237354 agggaacttctatggtacacctgcaaattacggtgtatcggtactctcgcttacaatttttataaattaattataattttttatg-aagaaaataggtgt 43237452  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    | |||||||||||||||||||||||    
T  43237453 tggttgacatatatattttagaaaa 43237477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 6532990 - 6532864
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||||||||||| ||| | ||| |||||||||| |||||| || |||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||    
T  6532990 attagggaacttttactgtacatccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcatgttttatg-aagaaaatagg 6532892  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    |||||||| |||||||||||||||||||    
T  6532891 tgtttgttaacatatatattttagaaaa 6532864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 2141650 - 2141526
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    ||||| |||| || || ||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||    
T  2141650 taggggacttctatggtacacccataaattacggtgtaccgttactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataagtg 2141552  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    |||||||| |||||||||||||||||    
T  2141551 tttgttgatatatatattttagaaaa 2141526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 24098277 - 24098154
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||| | ||||| |||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||| ||||||||  || |    
T  24098277 agggaacttctacagtacacctgcaaattacggtgtactggtactctcgcttacaatttttataaataaaatatcattttttatg-aagaaaataagtct 24098179  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  24098178 ttgttgacatatatattttagaaaa 24098154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 2414299 - 2414208
Alignment:
Q  161 gtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  2414299 gtgtaacggtactctcacttacaatttttataaattaactatcattttttatg-aagaaaataagtgtttgttgacatatatattttagaaaa 2414208  T

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Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 6318317 - 6318408
Alignment:
Q  161 gtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||||||||||    
T  6318317 gtgtagcggtactctcgcttacaatttttataaattaactataattttttacg-aagaaaataggtatttgttgacatatatattttagaaaa 6318408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 2029724 - 2029637
Alignment:
Q  165 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  2029724 accgatactctcgcttacaatttttataatttaactgtcattttttatg-aagaaaataggtgtttgttgacttatatattttagaaaa 2029637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 13091323 - 13091198
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||  |||  ||  |||||||||||||||||| ||||||||||| ||||  |     
T  13091323 attagggaacttctacggtacacccgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaa-agc 13091226  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    | |||||||| || ||||||||||||||    
T  13091225 tatttgttgatatttatattttagaaaa 13091198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 22780919 - 22780797
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| ||||  |||||||||| |||||||| ||||| | ||| ||  |||||||||||||||||||||||| ||||| ||||| | ||||    
T  22780919 gggaacttctacggtacacttgcaaattaagatgtaccggcactcttgtttaaaaaatttataaattaactatcattttttgtgaaa-aaaatagttgtt 22780821  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||| |||| |||||||||    
T  22780820 tgttgacatttatagtttagaaaa 22780797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 14967638 - 14967516
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||||| ||||||||||||||| |||||||||  |||  ||  |||||||||||||||||| ||||||||||| ||||  | | |    
T  14967638 agggaacttctacggtacacctgcaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaa-agctat 14967541  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    ||||||| || ||||||||||||||    
T  14967540 ttgttgatatctatattttagaaaa 14967516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 29744307 - 29744229
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    ||||||||||||| |||| | |||||||| ||||||||||||| | ||||  ||  |||||||||||||||||||||||    
T  29744307 ggaacttatacggtacactcacaaattaaagtgtaccggtacttttgcttcaaaaatttataaattaactatcattttt 29744229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 36427904 - 36427991
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    ||||||||| ||||| |||| | |||| | ||||||||||||||||| ||| |  | |||||||||||||| |||||||||| |||||    
T  36427904 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgctcaataattttataaattaacgatcattttttgtgaaa 36427991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 2318434 - 2318469
Alignment:
Q  139 tacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2318434 tacggtacacccgcaaattaaggtgtaccggtactc 2318469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 3425090 - 3425133
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||    
T  3425090 ggaacttctacggtacacccgcaaattaaagtgtaccggtactc 3425133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 9589610 - 9589535
Alignment:
Q  134 acttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    |||| ||||| ||| || |||||||||||||| |||||||||  |||  ||  |||||||||||||||||||||||    
T  9589610 acttctacggtacatccacaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcattttt 9589535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 39816506 - 39816584
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    ||||||| ||||| |||| | |||| | ||||||||||||||||| ||||   | |||||||||||||| |||||||||    
T  39816506 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttt 39816584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 28332529 - 28332484
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||||| ||||| ||||  ||||||||||||||||||||||||    
T  28332529 agggaacttctacggtacacttgcaaattaaggtgtaccggtactc 28332484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 479676 - 479764
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaa 220  Q
    |||||| ||||| |||| | |||| | |||||||| |||||||||||||   | ||||| |||||||| ||||||||| ||| ||||||    
T  479676 gaacttctacggtacactcacaaagtgaggtgtactggtactctcgcttcataattttacaaattaacgatcatttttcatgtaagaaa 479764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 12362356 - 12362400
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtact 173  Q
    ||||||||| || || ||| |||||||||||||||||||||||||    
T  12362356 agggaacttctaaggtacatccgcaaattaaggtgtaccggtact 12362400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 29460042 - 29459918
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29460042 agggaacttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 29459943  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  29459942 ttgttgacatatatattttagaaaa 29459918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 37511499 - 37511372
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37511499 attagggaacttctacggtacatccgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttattaaagaaaattgg 37511400  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  37511399 tgtttgttgacatatatattttagaaaa 37511372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 34332518 - 34332396
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  34332518 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgt 34332421  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  34332420 ttgttgacatatatattttagaaaa 34332396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 15725886 - 15726012
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||||||||||| ||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||    
T  15725886 attagggaacttctacggtacacctgcaaattacggtgtaccgatactctcgcttacaatttttataaattaactataattttttatg-aagaaaatagg 15725984  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  15725985 tgtttgttgacatatatattttagaaaa 15726012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 44935306 - 44935183
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  44935306 tagggaacttctacggtacacccgcaatttaaggtgtaccggtactctcggttac-atttttataaattaactatcattttttatgaaag-aaataggtg 44935209  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  44935208 tttgttgacatatatattttagaaaa 44935183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 28090597 - 28090475
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | |||    
T  28090597 agggaacttctacggtacacccgcaatttaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaatagatgt 28090500  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  28090499 ttgttgacatatatattttagaaaa 28090475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 29773851 - 29773729
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  29773851 agggaacttctacggtacacccgcaatttaaggtgtaccggtactttcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgt 29773754  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  29773753 ttgttgacatatatattttagaaaa 29773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 127 - 253
Target Start/End: Complemental strand, 946380 - 946253
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatt--ttttatgaaagaaaattg 224  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||      
T  946380 ttagggaacttctacggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttttatg-aagaaaataa 946282  T
Q  225 gtgtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||||    
T  946281 gtgtttgttgacatatatattttagaaaa 946253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 14498319 - 14498426
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  14498319 acacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 14498417  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  14498418 tttagaaaa 14498426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 29229175 - 29229298
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtg 227  Q
    ||||| ||| ||||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  29229175 agggatcttctacggtacacccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcacttttttatg-aagaaaataggtg 29229273  T
Q  228 tttgttgacatatatattttagaaa 252  Q
    |||||||||||||||||||||||||    
T  29229274 tttgttgacatatatattttagaaa 29229298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 23275030 - 23274907
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccgg-tactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    |||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  23275030 gggaacttctacgatacacccgcaaattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatg-aagaaaataggtgt 23274932  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    || |||||||||  |||||||||||    
T  23274931 tttttgacatatgcattttagaaaa 23274907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 23286970 - 23286849
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtgtt 229  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||  |||||    
T  23286970 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaag-aaataagtgtt 23286873  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    | |||| |||||||||||||||||    
T  23286872 tattgaaatatatattttagaaaa 23286849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 39171103 - 39171203
Alignment:
Q  151 gcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttaga 250  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  39171103 gcaaattaaggtgtaccagtactctcgcttaca-tttttataaattaactatcattttttataaaag-aaataggtgtttgttgacatatatattttaga 39171200  T
Q  251 aaa 253  Q
    |||    
T  39171201 aaa 39171203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 12162943 - 12163063
Alignment:
Q  133 aacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtgtttg 231  Q
    ||||||||||| | ||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||  ||||||| ||||||||    
T  12162943 aacttatacggtatacccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatg-tagaaaataggtgtttg 12163041  T
Q  232 ttgacatatatattttagaaaa 253  Q
    |||||| |||||||||||||||    
T  12163042 ttgacagatatattttagaaaa 12163063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 12407371 - 12407491
Alignment:
Q  133 aacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtgtttg 231  Q
    ||||||||||| | ||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||  ||||||| ||||||||    
T  12407371 aacttatacggtatacccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatg-tagaaaataggtgtttg 12407469  T
Q  232 ttgacatatatattttagaaaa 253  Q
    |||||| |||||||||||||||    
T  12407470 ttgacagatatattttagaaaa 12407491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 38502581 - 38502475
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  38502581 acacccgtaaattacggtgtatcggtattctcgcttacaatttttataaattaactatcat-ttttatg-aagaaaataggtgtttgttgacatatatat 38502484  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  38502483 tttagaaaa 38502475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 10280951 - 10280844
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    |||||||  ||||| |||||| ||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  10280951 acacccgtgaattacggtgtatcggtactctcgtttataatttttataaattaattatcattttttatg-aagaaaataggtgtttgttgacatatatat 10280853  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  10280852 tttagaaaa 10280844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 37161881 - 37161792
Alignment:
Q  163 gtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  37161881 gtaccagtactctcgcttataatttttataaattaactataattttttatg-aagaaaataggtgtttgttgacatatatattttagaaaa 37161792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 39170997 - 39171103
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaatta---actatcattttttatgaaagaaaattgg 225  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||| |||| ||    
T  39170997 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactactatcattttttatgaaag-aaatagg 39171094  T
Q  226 tgtttgttg 234  Q
    |||||||||    
T  39171095 tgtttgttg 39171103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 249
Target Start/End: Complemental strand, 23275173 - 23275078
Alignment:
Q  154 aattaaggtgtaccgg-tactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttag 249  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||  |||||||    
T  23275173 aattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatg-aagaaaataggtgttttttgacatatgcattttag 23275078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 36002726 - 36002643
Alignment:
Q  169 gtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  36002726 gtactctcgtttacaatttttataaattaactattattttttatg-aagaaaataggtgtttgttgacatatctattttagaaaa 36002643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 17642479 - 17642358
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||  |||  ||  |||||||||||||||||| ||||||||||| ||||  | | ||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaa-agctatt 17642382  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    |||||| || ||||||||||||||    
T  17642381 tgttgatatttatattttagaaaa 17642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 2273412 - 2273336
Alignment:
Q  133 aacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||  |||  ||  |||||||||||||| ||||||||    
T  2273412 aacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactgtcattttt 2273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 29454143 - 29454226
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    |||||||| ||||| |||| | |||| ||||||||||||||||||  ||||   | |||||||||||||| |||||||||||||    
T  29454143 gggaacttctacggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatg 29454226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 43485053 - 43485094
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtact 173  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  43485053 gaacttctacggtacacccgcaaattaaggtgtaccggtact 43485094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 10706554 - 10706641
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    ||||||||| ||||| |||| | |||| | |||||||| |||||||| ||||   | |||||||||||||| |||||||||| |||||    
T  10706554 agggaacttctacggtacactcacaaagtgaggtgtactggtactcttgcttcataattttataaattaacgatcattttttgtgaaa 10706641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 29265589 - 29265675
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    |||||||| ||| | |||| | |||| | ||||||||||||||||| | ||   | |||||||||||||| ||||||||||||||||    
T  29265589 gggaacttctactgtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaacgatcattttttatgaaa 29265675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 38329452 - 38329541
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaa 220  Q
    ||||||| ||||| |||| | |||| | || | |||||||||||||||||   | |||||||||||||| ||||||||| ||| ||||||    
T  38329452 ggaacttctacggtacactcacaaagtgagatataccggtactctcgctttataattttataaattaacgatcatttttcatgtaagaaa 38329541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 26439505 - 26439553
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||||||||| ||||| ||| || |||||||||||||| ||||||||    
T  26439505 attagggaacttctacggtacatccacaaattaaggtgtatcggtactc 26439553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 28327474 - 28327350
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28327474 agggaacttctacggtacacccgcaaattaagctgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 28327375  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  28327374 ttgttgacatatatattttagaaaa 28327350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 3910314 - 3910214
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3910314 aaataaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttgacatatatattttagaaa 3910215  T
Q  253 a 253  Q
    |    
T  3910214 a 3910214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 41913095 - 41913217
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  41913095 agggaacttctatggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgt 41913192  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  41913193 ttgttgacatatatattttagaaaa 41913217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 42711335 - 42711214
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||    
T  42711335 gggaacttctacggtacatccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgtt 42711238  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||    
T  42711237 tgttgacatatatattttagaaaa 42711214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 30863184 - 30863077
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  30863184 acacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 30863086  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  30863085 tttagaaaa 30863077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 41381886 - 41381771
Alignment:
Q  133 aacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgt 232  Q
    ||||| ||||| ||||||| ||||||| ||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  41381886 aacttctacggtacacccgtaaattaatgtgcaccggtacttttgcttacaatttttataaattaactatcattttttatgaaagaaaataggtctttgt 41381787  T
Q  233 tgacatatatatttta 248  Q
    ||||||||||||||||    
T  41381786 tgacatatatatttta 41381771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 38129383 - 38129507
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    ||||| |||| || || ||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||    
T  38129383 taggggacttctatggtacacccgtaaattacggtgtaccggtattcttgcttacaatttttataaattaactatcattttttatg-aagaaaataagtg 38129481  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  38129482 tttgttgacatatatattttagaaaa 38129507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 253
Target Start/End: Original strand, 30623743 - 30623842
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  30623743 aaattacggtgtaccgatactctcgcttacaatttttataaattaactatcattttttat-aaagaaaataagtgtttgttgacatatatattttagaaa 30623841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 27956691 - 27956591
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||    
T  27956691 gggaacttctatggtacacccgcaaattaaggtgtaccggtactctcgcttacaaattttataaattaactatcattttttgtaaaagaaaataggtgtt 27956592  T
Q  230 t 230  Q
    |    
T  27956591 t 27956591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 40942284 - 40942160
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggt 226  Q
    |||||||||| || || ||| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |||    
T  40942284 tagggaacttctatggtacatccgtaaattaagatgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaag-aaataggt 40942187  T
Q  227 gtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||| ||||    
T  40942186 gtttgttgacatatatattttaaaaaa 40942160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 21699307 - 21699414
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatttttt-atgaaagaaaattggtgtttgttgacatatata 243  Q
    |||| ||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||    
T  21699307 acactcgcaaattaaggtgtaccgatactctcgtttaca-tttttataaattaattatcatttttttatgaaagaaa-taggtgtttgttgacatatata 21699404  T
Q  244 ttttagaaaa 253  Q
    ||||||||||    
T  21699405 ttttagaaaa 21699414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 1691008 - 1691104
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatat 242  Q
    ||||||| |||||| ||| |||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  1691008 acacccgtaaattatggtataccggtactctcatttacaatttttttaaattaactatcattttttatg-aagaaaataggtgtttgttgacatatat 1691104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 45461731 - 45461660
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatc 203  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  45461731 gaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataatttaactatc 45461660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 30936093 - 30936215
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||  |||  ||  ||||||||||||||||||  |||||||||| ||||  | | |    
T  30936093 agggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-attttatgaaataaaa-agctat 30936190  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    ||||||| || ||||||||||||||    
T  30936191 ttgttgatatttatattttagaaaa 30936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 8770370 - 8770491
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||| ||||  ||  | ||||||||||||||||||||| |||||| |||   | ||||    
T  8770370 gggatcttatacggtacacccgcaaattaaggtgtaccgatactcttgcttcaaaaatctataaattaactatcattttt-atgaaataaaga-gttgtt 8770467  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    |||||| || | ||||||||||||    
T  8770468 tgttgatatttgtattttagaaaa 8770491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 45857475 - 45857596
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||  |||  ||  |||||||||||||||| |  |||||||||| ||||  | | ||    
T  45857475 gggaacttttacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatta-cttttatgaaataaaa-agctatt 45857572  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    |||||| || ||||||||||||||    
T  45857573 tgttgatatttatattttagaaaa 45857596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 18990495 - 18990450
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  18990495 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 18990450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 43750485 - 43750437
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  43750485 attagggaacttctacgggacacctgcaaattaaggtgtaccggtactc 43750437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 34118878 - 34118831
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactct 175  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  34118878 tagggaacttctacggtacacccgcaaattaaggtgtactggtactct 34118831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 44963823 - 44963902
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    |||||||| || || |||||| ||| ||||||||||||||||||||  |||  ||  |||||||||||||||||||||||    
T  44963823 gggaacttctatggtacacccacaatttaaggtgtaccggtactcttacttcaaaaatttataaattaactatcattttt 44963902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 26605052 - 26605138
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttat 212  Q
    |||||||||||| ||||| |||| | |||| | ||||||||||||||||| ||||   | |||||||||||||| || |||||||||    
T  26605052 attagggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttat 26605138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 30891667 - 30891570
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaatt 223  Q
    ||||||||||||  ||||||||  | |||| |||||||||||| ||||||  |||   | |||||||||||||| |||||||||||| ||| ||||||    
T  30891667 attagggaacttcaacggcacaatcacaaaataaggtgtaccgatactctttcttcataattttataaattaacgatcattttttattaaataaaatt 30891570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 20438825 - 20438860
Alignment:
Q  139 tacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20438825 tacggtacacccgcaaattaaggtgtaccggtactc 20438860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 45458885 - 45458850
Alignment:
Q  218 aaaattggtgtttgttgacatatatattttagaaaa 253  Q
    ||||| ||||||||||||||||||||||||||||||    
T  45458885 aaaataggtgtttgttgacatatatattttagaaaa 45458850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 23406653 - 23406735
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||||||| |||| | |||| | ||||||||||||||||  ||||   | ||||||| |||||| |||||||||||||    
T  23406653 ggaacttatacggtacactcacaaaatgaggtgtaccggtactcctgcttcataattttatatattaacgatcattttttatg 23406735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 15954668 - 15954587
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatttttt 210  Q
    ||||||||| ||||| |||| | |||| | |||||||||||||||||  |||   | |||||||||||||| ||||||||||    
T  15954668 agggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcatttttt 15954587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 35291327 - 35291412
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    ||||||| ||||| |||| | |||| | |||||||||||||||||  |||   | |||||||||||||| || |||||||||||||    
T  35291327 ggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgattattttttatgaaa 35291412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 23057108 - 23056984
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23057108 agggaacttctacggtacacccgcaaattaaggtgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 23057009  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  23057008 ttgttgacatatatattttagaaaa 23056984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 23061409 - 23061285
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  23061409 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaattatcattttttatgaaagaaaataggtgt 23061310  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  23061309 ttgttgacatatatattttagaaaa 23061285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 35305559 - 35305435
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35305559 agggaacttctacggtacactcgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 35305460  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  35305459 ttgttgacatatatattttagaaaa 35305435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 6519986 - 6520109
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6519986 agggaacttctacggtacacc-gcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 6520084  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  6520085 ttgttgacatatatattttagaaaa 6520109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 51369724 - 51369601
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  51369724 gggaacttttacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactattattttttatgaaagaaaataggtgtt 51369625  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||    
T  51369624 tgttgacatatatattttagaaaa 51369601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 921840 - 921964
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    |||||||||| || || ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  921840 tagggaacttctatggtacacctgcaaattaaggtgtaccggtactctcg-ttacaatttttataaattaactatcattttttatgaaagaaaattggtg 921938  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  921939 tttgttgacatatatattttagaaaa 921964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 5956525 - 5956649
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  5956525 agggaacttctacggtacacccacaaattaagctgtaccggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaataggtgt 5956624  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  5956625 ttgttgacatatatattttagaaaa 5956649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 8461523 - 8461649
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||| ||||||| || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  8461523 attaaggaacttctatggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttatg-aagaaaattgg 8461621  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  8461622 tgtttgttgacatatatattttagaaaa 8461649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 37499148 - 37499027
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||    
T  37499148 gggaacttctatggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgtt 37499051  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||    
T  37499050 tgttgacatatatattttagaaaa 37499027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 51720535 - 51720647
Alignment:
Q  14 cagagatgagatacataacataagaagaagataaagtgagatgagttagatcgaatgggaaggaaaaggagccatggagattttttcttccattaacact 113  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51720535 cagagatgagatacataaca---gaagaagatagagtgagatgagttagatcgaatgggaaggaaaaggagccatggagattttttcttccattaatact 51720631  T
Q  114 gcatgcagtcagatta 129  Q
     |||||||||||||||    
T  51720632 acatgcagtcagatta 51720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 18642260 - 18642153
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  18642260 acacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa-aaaataggtgtttgttgacatatatat 18642162  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  18642161 tttagaaaa 18642153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 28494169 - 28494055
Alignment:
Q  137 tatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgac 236  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  28494169 tatacggtacacccgcaaattaaggtgtaccggtactcttgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgtttgttgac 28494072  T
Q  237 atatatattttagaaaa 253  Q
    |||||||||||||||||    
T  28494071 atatatattttagaaaa 28494055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 52303400 - 52303297
Alignment:
Q  149 ccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatatttta 248  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  52303400 ccgcaaattaaggtgtaccggtactctcacttaca-tttttataaattaactatcattttttatgaaagaaaataggtgtttgttgacatatatatttta 52303302  T
Q  249 gaaaa 253  Q
    |||||    
T  52303301 gaaaa 52303297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 39971267 - 39971391
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    ||||| |||| || || ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||     
T  39971267 taggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtt 39971365  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  39971366 tttgttgacatatatattttagaaaa 39971391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 51985343 - 51985219
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    |||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||    
T  51985343 tagggaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactataattctttatg-aagaaaataggtg 51985245  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    |||||||||| |||||||||||||||    
T  51985244 tttgttgacaaatatattttagaaaa 51985219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 45424006 - 45423899
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  45424006 acacccgtaaattacgatgtaccggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 45423908  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  45423907 tttagaaaa 45423899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 23459564 - 23459671
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  23459564 acacccgtaaattacggtgtaccagtactctcgcttataatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 23459662  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  23459663 tttagaaaa 23459671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 153 - 253
Target Start/End: Original strand, 39190586 - 39190685
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  39190586 aaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatattttagaaa 39190684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 46770746 - 46770853
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  46770746 acacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 46770844  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  46770845 tttagaaaa 46770853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 45673700 - 45673601
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  45673700 aaattacggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatg-aagaaaataggtgtttgttgacaaatatattttagaaa 45673602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 50905962 - 50905863
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  50905962 aaattacggtgtaccggtactctcgcttacaatttttataaattaaatataattttttatg-aagaaaataggtgtttgttgacatatatattttagaaa 50905864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 51520205 - 51520098
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| || |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  51520205 acacccgtaaattacggggtaccggtactctcactttcaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 51520107  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  51520106 tttagaaaa 51520098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 38262172 - 38262255
Alignment:
Q  169 gtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38262172 gtactctcgcttacaatttttataaattaattatcattttttatg-aagaaaataggtgtttgttgacatatatattttagaaaa 38262255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 147 - 253
Target Start/End: Complemental strand, 43306921 - 43306817
Alignment:
Q  147 acccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattt 246  Q
    ||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||| || ||||||||||||||||||||    
T  43306921 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactat-aatttttatg-aagaaaataggcgtttgttgacatatatattt 43306824  T
Q  247 tagaaaa 253  Q
    |||||||    
T  43306823 tagaaaa 43306817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 26102474 - 26102595
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 230  Q
    ||||||| ||||| |||||   |||||| ||||||||| || ||||  |||| ||||||||||||||||||| |||||||||| |||||||| |||||||    
T  26102474 ggaacttctacggtacacctctaaattacggtgtaccgatattctcatttacgatttttataaattaactataattttttatg-aagaaaataggtgttt 26102572  T
Q  231 gttgacatatatattttagaaaa 253  Q
     ||||||||||||||||||||||    
T  26102573 cttgacatatatattttagaaaa 26102595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 50239275 - 50239356
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||  |||  ||  |||||||||||||||||||||||    
T  50239275 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcattttt 50239356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 29106408 - 29106486
Alignment:
Q  173 tctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||  ||||||||||| || ||||||||||||||    
T  29106408 tctcgcttacaatttttataaattaactat-attttttatg-aagaaaatatgtgtttgttgatatgtatattttagaaaa 29106486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 16482926 - 16482867
Alignment:
Q  186 ttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattt 246  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||    
T  16482926 ttttataaattaactataattttttatg-aagaaaataggtgtttgttgacatatagattt 16482867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 26010943 - 26010986
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  26010943 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 26010986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 51977859 - 51977902
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  51977859 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 51977902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 12105157 - 12105243
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||||| ||||| |||| | |||| | ||||||||||||||||| ||||   | |||||||||||||| || ||||||||||    
T  12105157 ttagggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatg 12105243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 23304798 - 23304693
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||||| ||||||||||||||  |||  ||  |||||||||||||||| | ||||||||||| ||||  | | |||||||| || |||||    
T  23304798 acacccgtaaattaagatgtaccggtactcttacttcaaaaatttataaattaactatta-tttttatgaaataaaa--gctatttgttgatatttatat 23304702  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  23304701 tttagaaaa 23304693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 51184447 - 51184366
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    |||||||||| || || |||||| ||| ||||||||| ||||||||||  |||  ||  |||||||||||||||||||||||    
T  51184447 tagggaacttctatggtacacccacaatttaaggtgtgccggtactcttacttcaaaaatttataaattaactatcattttt 51184366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 34038163 - 34038247
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    |||||| ||||| |||| | |||| | ||||||||||||||||  ||||   | |||||||||||||| ||||||||||||||||    
T  34038163 gaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgaaa 34038247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 48976874 - 48976958
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||| |||||||||| | |||| | ||||||| ||||||||  ||||   | |||||||||||||| |||||||||||||    
T  48976874 agggaacttctacggcacactcacaaagtgaggtgtatcggtactcctgcttcataattttataaattaacgatcattttttatg 48976958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 632648 - 632691
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtact 173  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||    
T  632648 gggaacttctacggcacacccgcaaattaaggtgaaccgatact 632691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 7122361 - 7122282
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    |||||||| ||| | |||||| ||| |||| |||||||||||||||  |||  ||  |||||||||||||||||||||||    
T  7122361 gggaacttctacagtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatcattttt 7122282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 46641923 - 46641840
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    |||||||| ||||| |||| |||||| | ||||||||||||||||  ||||   | |||||||||| ||| |||||||||||||    
T  46641923 gggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatg 46641840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 52345598 - 52345685
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    ||||||||| ||||| |||| | |||| | ||||||||||||||||| | ||   | |||||||||||||| |||||||||| |||||    
T  52345598 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaacgatcattttttgtgaaa 52345685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 12179005 - 12178955
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgctt 180  Q
    |||||||| ||||| |||| |||||||| ||||||||||||||||| ||||    
T  12179005 gggaacttttacggtacactcgcaaattgaggtgtaccggtactcttgctt 12178955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 2247449 - 2247408
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtact 173  Q
    |||||| ||||| |||||| ||||||||||||||||||||||    
T  2247449 gaacttctacggtacacccacaaattaaggtgtaccggtact 2247408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 2621088 - 2621043
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtac 172  Q
    ||||||||||| ||||| ||||| ||||||||||||||| ||||||    
T  2621088 ttagggaacttctacggtacacctgcaaattaaggtgtatcggtac 2621043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 42275364 - 42275421
Alignment:
Q  159 aggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    ||||||||||||||||  ||||   | |||||||||||||| ||||||||||||||||    
T  42275364 aggtgtaccggtactcatgcttcataattttataaattaacgatcattttttatgaaa 42275421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 42316850 - 42316879
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||||||||||||||||||||||||||    
T  42316850 acacccgcaaattaaggtgtaccggtactc 42316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 14152687 - 14152767
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatttttt 210  Q
    |||||||| ||||| | || | |||| |||||| |||||||||||| |||||  | |||||||||||||| || |||||||    
T  14152687 gggaacttctacggtatactcacaaaataaggtataccggtactcttgcttaataattttataaattaacaataatttttt 14152767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 25702435 - 25702515
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatttttt 210  Q
    |||||||| ||||| |||| |  ||||| ||||||||||||||||| ||||   | |||||||||| ||| ||||||||||    
T  25702435 gggaacttctacggtacactcataaattgaggtgtaccggtactcttgcttcataattttataaatcaacgatcatttttt 25702515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 33910096 - 33910052
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||| || ||||| |||||| |||||||||||||||||||||||    
T  33910096 gggaatttctacggtacacccacaaattaaggtgtaccggtactc 33910052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 4673600 - 4673724
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4673600 agggaacttctaaggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 4673699  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  4673700 ttgttgacatatatattttagaaaa 4673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 37083618 - 37083494
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37083618 agggaacttctacggtacatccgcaaattaaggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 37083519  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  37083518 ttgttgacatatatattttagaaaa 37083494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 11813188 - 11813315
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||||| || || ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11813188 attaggcaatttctacggtacacccacaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaatagg 11813287  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  11813288 tgtttgttgacatatatattttagaaaa 11813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 127 - 253
Target Start/End: Complemental strand, 34665979 - 34665855
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggt 226  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| |||    
T  34665979 ttagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactattattttttatgaaag-aaataggt 34665882  T
Q  227 gtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||    
T  34665881 gtttgttgacatatatattttagaaaa 34665855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 127 - 253
Target Start/End: Original strand, 5389199 - 5389323
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggt 226  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||  ||    
T  5389199 ttagggaacttctacggtacacccgcaaattaaggtgtaccggcactctcgcttac-atttttataaattaactatcattttttatgaaag-aaatatgt 5389296  T
Q  227 gtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||    
T  5389297 gtttgttgacatatatattttagaaaa 5389323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 1353911 - 1353791
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 230  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  1353911 ggaacttctacggtacacccgcaaattaaggtgtaccagtactctcgcttac-atttttataaattaactataattttttatgaaag-aaataggtgttt 1353814  T
Q  231 gttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||    
T  1353813 gttgacatatatattttagaaaa 1353791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 15771318 - 15771431
Alignment:
Q  139 tacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacat 238  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  15771318 tacggtacacccgtaaattaaggtgtaccggtactctcgcttataatttttataaattaactatcattttttat-aaagaaaataagtgtttgttgacat 15771416  T
Q  239 atatattttagaaaa 253  Q
    |||||||||||||||    
T  15771417 atatattttagaaaa 15771431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 3810452 - 3810572
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttg 231  Q
    |||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||     
T  3810452 gaacttctacgacacacccacaaattaaggtgtaccggtactttcgcttacaatttttataaattaactattattttttatg-aagaaaataggtgtttt 3810550  T
Q  232 ttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||    
T  3810551 ttgacatatatattttagaaaa 3810572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 14532822 - 14532946
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    |||||||||| ||||| |||||||||||||| |||||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  14532822 tagggaacttctacggtacacccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcattttttatg-aagaaaataggtg 14532920  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    |||||| |||||||||||||||||||    
T  14532921 tttgttaacatatatattttagaaaa 14532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 6884545 - 6884454
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  6884545 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttgatatatatat 6884454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 59325 - 59202
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaagg-tgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    |||||||| ||||| ||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  59325 gggaacttctacggtacacctgcaaatttatgatgtaccggtactctcgcttacaatttttataaattaactataattttttatg-aagaaaataggtgt 59227  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  59226 ttgttgacatatatattttagaaaa 59202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 3383191 - 3383314
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtgt 228  Q
    |||||||| ||||| ||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  3383191 gggaacttctacggtacatccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcatttttttatg-aagaaaataggtgt 3383289  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  3383290 ttgttgacatatatattttagaaaa 3383314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 42427583 - 42427690
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  42427583 acacccgtaaattacggtgtaccgatactcttgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 42427681  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  42427682 tttagaaaa 42427690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 11228031 - 11227914
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttg 231  Q
    |||||| ||||| ||||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  11228031 gaacttctacggtacacctgcaaattaaggtgtatcagtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtgtttg 11227934  T
Q  232 ttgacatatatattttagaa 251  Q
    ||||||||||||||||||||    
T  11227933 ttgacatatatattttagaa 11227914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 33423032 - 33423156
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    |||||||||| |||   ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||    
T  33423032 tagggaacttttactatacatccgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttaatgaaa-aaaatagctg 33423130  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||| ||||    
T  33423131 tttgttgacatatatattttaaaaaa 33423156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 38963068 - 38963190
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca--ttttttatgaaagaaaattggtgt 228  Q
    ||||||| ||||  ||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||  |||||||| |||| |||| |||||    
T  38963068 ggaacttctacgttacacctgcaaattaaggtgcaccggtactctcgcttac-atttttataaattaactatcattttttttataaaag-aaataggtgt 38963165  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  38963166 ttgttgacatatatattttagaaaa 38963190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 37909763 - 37909720
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  37909763 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 37909720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 25331454 - 25331538
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||| ||||| |||| | |||| | ||||||||||||||||  ||||   | |||||||||| |||||||||||||||||    
T  25331454 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaactatcattttttatg 25331538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 12547758 - 12547694
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    ||||||||||||||||||||||  |||||||  |||  ||  |||||||||||||||| ||||||    
T  12547758 acacccgcaaattaaggtgtacgagtactcttacttcaaaaatttataaattaactattattttt 12547694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 11109595 - 11109720
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtg 227  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||    
T  11109595 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaaaatttttataaattaactatcatttttttatgaaagaaaattgatg 11109694  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  11109695 tttgttgacatatatattttagaaaa 11109720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 127 - 253
Target Start/End: Complemental strand, 55722886 - 55722762
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggt 226  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  55722886 ttagggaacttttacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggt 55722789  T
Q  227 gtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||    
T  55722788 gtttgttgacatatatattttagaaaa 55722762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 48578906 - 48579028
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  48578906 agggaacttctacggtacacccgtaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgt 48579003  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  48579004 ttgttgacatatatattttagaaaa 48579028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 14803084 - 14802996
Alignment:
Q  165 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14803084 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 14802996  T

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Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 47302386 - 47302264
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 229  Q
    |||||||| ||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  47302386 gggaacttctacggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatg-aagaaaataggtgtt 47302288  T
Q  230 tgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||| ||||    
T  47302287 tgttgacatatatattttaaaaaa 47302264  T

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Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 41759660 - 41759780
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 230  Q
    ||||||| ||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  41759660 ggaacttctacggtacacccgtaaattaaagtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgttt 41759757  T
Q  231 gttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||    
T  41759758 gttgacatatatattttagaaaa 41759780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 253
Target Start/End: Complemental strand, 37855526 - 37855405
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttg 231  Q
    |||||| ||||| ||| | | |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  37855526 gaacttctacggtacatctgtaaattaaggtgtaccggtaccctcgcttacaatttttataaattaactgtcattttttatgaaagaaaataagtgtttg 37855427  T
Q  232 ttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||    
T  37855426 ttgacatatatattttagaaaa 37855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 3716732 - 3716609
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  3716732 agggaacttctacggtacacttggaaattacggtgtaccggtactctcgcttacaatttttataaattaactataattttttatg-aagaaaataggtgt 3716634  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  3716633 ttgttgacatatatattttagaaaa 3716609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 33075994 - 33076102
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtgtttgttgacatatata 243  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  33075994 acacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttttatg-aagaaaataggtgtttgttgacatatata 33076092  T
Q  244 ttttagaaaa 253  Q
    ||||||||||    
T  33076093 ttttagaaaa 33076102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 30539951 - 30539844
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  30539951 acacccgtaaattacggtgtactggtactctcgcttataatttttataaattaactatcattttttatgaaa-aaaataggtgtttgttgacatatatat 30539853  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  30539852 tttagaaaa 30539844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 34280239 - 34280346
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  34280239 acacccgtaaattgcggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 34280337  T
Q  245 tttagaaaa 253  Q
    |||| ||||    
T  34280338 tttaaaaaa 34280346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 38836261 - 38836134
Alignment:
Q  125 gattagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattg 224  Q
    ||||||||||||| ||||| ||||| |||||||| |||||| |||||||||||||||||| |||| |||||||| ||| ||||||||||||| ||||| |    
T  38836261 gattagggaacttctacggtacacctgcaaattacggtgtatcggtactctcgcttacaacttttgtaaattaattataattttttatgaaa-aaaatag 38836163  T
Q  225 gtgtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||||    
T  38836162 gtgtttgttgacatatatattttagaaaa 38836134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 37518961 - 37519087
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||||||||||| ||||| ||||||| ||||||  || || | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |    
T  37518961 attagggaacttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataag 37519059  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  37519060 tgtttgttgacatatatattttagaaaa 37519087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 37523177 - 37523303
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    |||||||||||| ||||| ||||||| ||||||  || || | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |    
T  37523177 attagggaacttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataag 37523275  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  37523276 tgtttgttgacatatatattttagaaaa 37523303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 52592201 - 52592077
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    |||||||||| ||||| ||| ||| |||||| ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||  |||    
T  52592201 tagggaacttctacggtacatccgtaaattacggtgtaccggtactctcgcatacaatttttataaagtaattatcattttttatg-aagaaaataagtg 52592103  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  52592102 tttgttgacatatatattttagaaaa 52592077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 28038091 - 28037969
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtgt 228  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||| |    
T  28038091 gggaacttctacggtacacccacaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaag-aaataggttt 28037994  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    ||||||| |||||||||||||||||    
T  28037993 ttgttgaaatatatattttagaaaa 28037969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 51435811 - 51435935
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatca-ttttttatgaaagaaaattggtg 227  Q
    ||||||||| || || ||||||||||||||||||||||||| ||||||  ||||| ||||| |||||||||||||| ||||||||||||| |||| ||||    
T  51435811 agggaacttctatggtacacccgcaaattaaggtgtaccggaactctcatttacattttttttaaattaactatcatttttttatgaaag-aaataggtg 51435909  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||    
T  51435910 tttgttgacatatatattttagaaaa 51435935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 46042092 - 46041985
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    |||||||  ||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  46042092 acacccgtgaattacgatgtaccggtactctcgtttataatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatat 46041994  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  46041993 tttagaaaa 46041985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 30343232 - 30343120
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatt-ttttatgaaagaaaattggtgttt 230  Q
    |||||| ||||| |||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  30343232 gaacttctacggtacacccgcaaattacggtttaccgctactctcacttacaatttttataaattaactatcatttttttatg-aagaaaataggtgttt 30343134  T
Q  231 gttgacatatatat 244  Q
    ||||||||||||||    
T  30343133 gttgacatatatat 30343120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 27539300 - 27539201
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  27539300 aaattatggtgtaccggtactcttgcttataatttttataaattaactataattttttatg-aagaaaataggtgtttgttgatatatatattttagaaa 27539202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 43137367 - 43137493
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    ||||||| |||| || || |||||||  ||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||| ||    
T  43137367 attaggggacttctatggtacacccgtgaattacggtgtatcggtactctcacttacaattttaataaattaactatcattttttgt-aaagaaaatagg 43137465  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||| ||||    
T  43137466 tgtttgttgacatatatattttaaaaaa 43137493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 53388867 - 53388968
Alignment:
Q  151 gcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatttttt-atgaaagaaaattggtgtttgttgacatatatattttag 249  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  53388867 gcaaattaaggtgtaccggtactctcgtttaca-tttttataaattaaccatcatttttttatgaaagaaa-taggtgtttgttgacatatatattttag 53388964  T
Q  250 aaaa 253  Q
    ||||    
T  53388965 aaaa 53388968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 52589480 - 52589356
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    ||||| |||| || || |||| || |||||| ||||||||| |||||| | ||| |||||||||||||||||||| |||||||||| |||||||| ||||    
T  52589480 taggggacttctatggtacactcgtaaattacggtgtaccgatactcttgtttataatttttataaattaactataattttttatg-aagaaaataggtg 52589382  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||| ||||||||||||||||||||||    
T  52589381 tttattgacatatatattttagaaaa 52589356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 9858654 - 9858534
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 230  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||  |||  ||  |||||||||||||||| | ||||||||||| ||||  | | |||    
T  9858654 ggaacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatta-tttttatgaaataaaa-agctattt 9858557  T
Q  231 gttgacatatatattttagaaaa 253  Q
    ||||| || ||||||||||||||    
T  9858556 gttgatatttatattttagaaaa 9858534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 31908846 - 31908769
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    |||||| ||||| |||||||||||||||||||||||||||||||  |||  ||  |||||||||||||||||| ||||    
T  31908846 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaatttt 31908769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 36091463 - 36091385
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    ||||||| ||||| ||||| | |||||||||||||||||||||||  |||  ||  |||||||||||||||||||||||    
T  36091463 ggaacttctacggtacacctgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcattttt 36091385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 51282338 - 51282262
Alignment:
Q  133 aacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttt 209  Q
    ||||| ||||| |||||| ||| |||| |||||||||||||||  |||  ||  |||||||||||||||||||||||    
T  51282338 aacttctacggtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatcattttt 51282262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 53695386 - 53695430
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  53695386 gggaacttctacggtacacctgcaaattaaggtgtaccggtactc 53695430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 23058765 - 23058855
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaa 220  Q
    |||||||| ||||| |||| | |||| | || |||||||||||||||||||   | ||||| |||||||| ||||||||| ||| ||||||    
T  23058765 gggaacttctacggtacactcacaaagtgagatgtaccggtactctcgcttcatacttttacaaattaacgatcatttttcatgtaagaaa 23058855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 31681594 - 31681548
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  31681594 tagggaacttctacggtacacccgtaaattaaggtgtaccagtactc 31681548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 42177342 - 42177428
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    |||||||| ||||| |||| | |||| | ||||||| |||||||||  |||   | |||||||||||||| ||||||||||||||||    
T  42177342 gggaacttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgatcattttttatgaaa 42177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 24979944 - 24980024
Alignment:
Q  132 gaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    |||||| ||||| |||| | |||| ||||||||||||||||| | |||| ||  |||||||||||||| || ||||||||||    
T  24979944 gaacttctacggtacactcacaaaataaggtgtaccggtactattgctt-catattttataaattaacgataattttttatg 24980024  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 30348192 - 30348249
Alignment:
Q  159 aggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaa 216  Q
    |||||||||||||||||  |||   | |||||||||||||| ||||||||||||||||    
T  30348192 aggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaa 30348249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 50383358 - 50383419
Alignment:
Q  159 aggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaa 220  Q
    ||||||| ||||||||||||||   | |||||||||||||| ||||||||| ||| ||||||    
T  50383358 aggtgtatcggtactctcgcttcataattttataaattaacgatcatttttcatgtaagaaa 50383419  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 46215772 - 46215816
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||    
T  46215772 gggaacttctacggtacactcgcaaattaatgtgtaccggtactc 46215816  T

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Target: chr6 (Bit Score: 97; Significance: 9e-48; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 153 - 253
Target Start/End: Original strand, 24487308 - 24487408
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24487308 aaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 24487407  T
Q  253 a 253  Q
    |    
T  24487408 a 24487408  T

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Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 2259311 - 2259194
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  2259311 agggaacttctacggtacacccgcaaattaaggtgtacaggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgt 2259214  T
Q  229 ttgttgacatatatatttta 248  Q
    ||||||||||||||||||||    
T  2259213 ttgttgacatatatatttta 2259194  T

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Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 13390771 - 13390672
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  13390771 aaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttgacatatatattttagaaa 13390673  T

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Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 17545994 - 17545888
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatat 244  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17545994 acacccgcaaattaaggtgtactggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtgtttgttgacatatatat 17545897  T
Q  245 tttagaaaa 253  Q
    |||||||||    
T  17545896 tttagaaaa 17545888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 24213322 - 24213196
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    ||||||||| || ||||| |||||||||||||| ||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||||||| ||    
T  24213322 attagggaatttctacggtacacccgcaaattacggtatatcggtactttcacttacaatttttataaattaactatcattttttatg-aagaaaatagg 24213224  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  24213223 tgtttgttgacatatatattttagaaaa 24213196  T

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Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 253
Target Start/End: Complemental strand, 4110964 - 4110839
Alignment:
Q  127 ttagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggt 226  Q
    |||||| |||| || || ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  4110964 ttaggggacttctatggtacacccgtaaattacggtgtaccggttctctcgcttacaatttttataaattaactatcattttttatg-aagaaaataggt 4110866  T
Q  227 gtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||| |||||    
T  4110865 gtttgttgacatatatattttcgaaaa 4110839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 32833773 - 32833896
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||    
T  32833773 agggaacttctacggtacatccgcaaattacggtgtactggtactctcgcttacaatttttataaattaactatcattttttatg-aagaaaataagtgt 32833871  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
     | ||||||||||||||||||||||    
T  32833872 ctattgacatatatattttagaaaa 32833896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 6848921 - 6848793
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttat-----gaaagaaaatt 223  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||      ||| |||||     
T  6848921 agggaacttctacggtacacccgtaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttataaaaaaaaaaaaaata 6848823  T
Q  224 ggtgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||||    
T  6848822 ggtgtttgttgacatatatattttagaaaa 6848793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 1096626 - 1096501
Alignment:
Q  126 attagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattgg 225  Q
    ||||||| |||| || || ||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||||| | |||||| ||    
T  1096626 attaggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactat-aatttttatg-aggaaaatagg 1096529  T
Q  226 tgtttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||||||||||    
T  1096528 tgtttgttgacatatatattttagaaaa 1096501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 8401414 - 8401539
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcatttttt-atgaaagaaaattggtgt 228  Q
    ||||| || ||||| |||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  8401414 gggaatttctacggtacacccgcaaattacggtgtaccgctactctcacttacaatttttataaattaactatcatttttttatgaa-gaaaataggtgt 8401512  T
Q  229 ttgttgacatat--atattttagaaaa 253  Q
    ||||||||||||  |||||||||||||    
T  8401513 ttgttgacatatatatattttagaaaa 8401539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 153 - 253
Target Start/End: Original strand, 26358575 - 26358674
Alignment:
Q  153 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaa 252  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| |||    
T  26358575 aaattatggtgtaccagtactctcgcttataatttttataaattaactatcattttttatg-aagaaaatacgtgtttgttgacatatatattttaaaaa 26358673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 33574760 - 33574676
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||| ||||| |||| | |||| | ||||||||||||||||| ||||   | |||||||||||||| |||||||||||||    
T  33574760 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatg 33574676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 33574938 - 33574854
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatg 213  Q
    ||||||||| ||||| |||| | |||| | ||||||||||||||||| ||||   | |||||||||||||| |||||||||||||    
T  33574938 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatg 33574854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 15383204 - 15383247
Alignment:
Q  131 ggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  15383204 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 15383247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 34195879 - 34195922
Alignment:
Q  130 gggaacttatacggcacacccgcaaattaaggtgtaccggtact 173  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||    
T  34195879 gggaacttctacggtacatccgcaaattaaggtgtaccggtact 34195922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 18772210 - 18772176
Alignment:
Q  186 ttttataaattaactatcattttttatgaaagaaa 220  Q
    |||||||||||||| ||||||||||||||||||||    
T  18772210 ttttataaattaacgatcattttttatgaaagaaa 18772176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 48416 - 48294
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 228  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  48416 agggaacttctacggtacacccgcaatttaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtgt 48319  T
Q  229 ttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||    
T  48318 ttgttgacatatatattttagaaaa 48294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 58171 - 58123
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactctcg 177  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  58171 agggaacttctacggtacacccgcaatttaaggtgtaccggtactctcg 58123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 36643 - 36731
Alignment:
Q  165 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36643 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatattttagaaaa 36731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 6646 - 6523
Alignment:
Q  128 tagggaacttatacggcacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtg 227  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||| |  || ||||  |||||| || |||| ||||    
T  6646 tagggaacttctacggtacacccgcaatttaaggtgtaccggtactctcggttac-atttttataaatcacttaccattccttatgacag-aaataggtg 6549  T
Q  228 tttgttgacatatatattttagaaaa 253  Q
    ||||||||||||||||||||| ||||    
T  6548 tttgttgacatatatattttacaaaa 6523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 6265 - 6310
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  6265 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 6310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 174
Target Start/End: Complemental strand, 2411 - 2382
Alignment:
Q  145 acacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||||||||||||||||||||||||||    
T  2411 acacccgcaaattaaggtgtaccggtactc 2382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 29652 - 29607
Alignment:
Q  129 agggaacttatacggcacacccgcaaattaaggtgtaccggtactc 174  Q
    ||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  29652 agggaacatctacggtacacctgcaaattaaggtgtaccggtactc 29607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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