View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1420_low_8 (Length: 528)

Name: NF1420_low_8
Description: NF1420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1420_low_8
NF1420_low_8
[»] chr3 (101 HSPs)
chr3 (1-513)||(54634711-54635224)
chr3 (1-513)||(6716086-6716599)
chr3 (9-513)||(3617035-3617540)
chr3 (9-513)||(25637014-25637517)
chr3 (9-513)||(4600822-4601327)
chr3 (9-513)||(4598601-4599106)
chr3 (13-452)||(45282628-45283070)
chr3 (9-513)||(10055806-10056309)
chr3 (9-513)||(10066916-10067419)
chr3 (9-513)||(10210979-10211485)
chr3 (9-513)||(10058028-10058531)
chr3 (9-513)||(10060250-10060753)
chr3 (9-513)||(10062472-10062975)
chr3 (9-513)||(10064694-10065197)
chr3 (66-452)||(6718331-6718718)
chr3 (9-513)||(10208779-10209265)
chr3 (3-506)||(800694-801190)
chr3 (3-502)||(23200208-23200716)
chr3 (3-502)||(23198009-23198517)
chr3 (242-513)||(8477729-8478001)
chr3 (234-513)||(40372257-40372538)
chr3 (234-513)||(7167600-7167881)
chr3 (233-498)||(27352097-27352364)
chr3 (3-137)||(7780074-7780208)
chr3 (3-502)||(37408049-37408556)
chr3 (3-254)||(9636196-9636456)
chr3 (241-513)||(28503320-28503595)
chr3 (158-502)||(7782375-7782699)
chr3 (277-513)||(22172663-22172899)
chr3 (255-513)||(28501153-28501412)
chr3 (297-469)||(2671110-2671283)
chr3 (14-221)||(5258224-5258440)
chr3 (241-406)||(8738631-8738798)
chr3 (241-406)||(9090869-9091036)
chr3 (3-221)||(45095037-45095261)
chr3 (14-221)||(5260403-5260619)
chr3 (279-502)||(1306366-1306591)
chr3 (3-254)||(5236526-5236785)
chr3 (331-513)||(18656844-18657028)
chr3 (3-221)||(7764340-7764562)
chr3 (3-219)||(7762140-7762363)
chr3 (3-209)||(19683959-19684173)
chr3 (3-221)||(40735255-40735481)
chr3 (14-209)||(39153441-39153645)
chr3 (297-502)||(26928093-26928301)
chr3 (277-502)||(27453342-27453568)
chr3 (457-513)||(6718289-6718345)
chr3 (3-100)||(29196456-29196555)
chr3 (1-220)||(32744504-32744721)
chr3 (457-513)||(45282586-45282642)
chr3 (235-452)||(32143664-32143884)
chr3 (331-507)||(8512643-8512820)
chr3 (3-221)||(40734370-40734596)
chr3 (3-209)||(760731-760945)
chr3 (331-502)||(2672431-2672603)
chr3 (438-502)||(37726222-37726286)
chr3 (331-409)||(8517523-8517602)
chr3 (331-509)||(32475887-32476066)
chr3 (331-509)||(32480745-32480924)
chr3 (232-409)||(24968419-24968599)
chr3 (3-100)||(41819592-41819691)
chr3 (1-100)||(44700546-44700646)
chr3 (3-97)||(22835072-22835167)
chr3 (351-502)||(33386150-33386302)
chr3 (3-100)||(4569952-4570050)
chr3 (28-100)||(5433971-5434046)
chr3 (3-96)||(30236129-30236223)
chr3 (1-98)||(31314447-31314545)
chr3 (3-100)||(34491212-34491310)
chr3 (3-209)||(9581167-9581380)
chr3 (4-100)||(44331545-44331642)
chr3 (3-100)||(49199539-49199638)
chr3 (29-100)||(43401898-43401970)
chr3 (20-100)||(51352197-51352278)
chr3 (331-502)||(2676587-2676759)
chr3 (457-505)||(40734084-40734132)
chr3 (3-221)||(51398686-51398912)
chr3 (455-502)||(27974446-27974493)
chr3 (456-507)||(36029658-36029709)
chr3 (457-507)||(16264896-16264946)
chr3 (457-507)||(21711768-21711818)
chr3 (28-100)||(29813063-29813136)
chr3 (457-507)||(30709266-30709316)
chr3 (3-98)||(32891105-32891202)
chr3 (28-100)||(46860474-46860547)
chr3 (457-502)||(27027273-27027318)
chr3 (144-221)||(29812935-29813010)
chr3 (457-513)||(8738543-8738599)
chr3 (457-513)||(9090781-9090837)
chr3 (29-88)||(28253363-28253423)
chr3 (3-100)||(53921573-53921671)
chr3 (29-97)||(9666562-9666632)
chr3 (455-501)||(27985971-27986017)
chr3 (457-507)||(39032025-39032075)
chr3 (27-80)||(25517069-25517121)
chr3 (29-100)||(43403841-43403913)
chr3 (28-80)||(4386875-4386926)
chr3 (3-100)||(6095669-6095767)
chr3 (3-100)||(29810868-29810966)
chr3 (457-505)||(40735015-40735063)
chr3 (3-100)||(54593704-54593802)
[»] chr8 (72 HSPs)
chr8 (1-513)||(3439089-3439603)
chr8 (1-452)||(25689604-25690054)
chr8 (9-513)||(42575402-42575908)
chr8 (9-513)||(15290144-15290614)
chr8 (9-513)||(15470513-15470983)
chr8 (3-502)||(2627331-2627834)
chr8 (241-513)||(4759535-4759809)
chr8 (255-513)||(30656023-30656281)
chr8 (242-513)||(36979741-36980013)
chr8 (241-513)||(18852628-18852902)
chr8 (241-501)||(1261428-1261692)
chr8 (296-513)||(33037288-33037506)
chr8 (241-513)||(18870022-18870296)
chr8 (241-507)||(6311659-6311928)
chr8 (241-513)||(7289428-7289704)
chr8 (331-513)||(10683740-10683923)
chr8 (4-221)||(34254402-34254624)
chr8 (235-502)||(26288234-26288504)
chr8 (235-502)||(26301491-26301761)
chr8 (235-502)||(26313485-26313755)
chr8 (241-513)||(39784326-39784601)
chr8 (14-221)||(17982525-17982741)
chr8 (14-221)||(31218129-31218345)
chr8 (335-513)||(25327665-25327844)
chr8 (3-221)||(44303726-44303953)
chr8 (3-209)||(34256577-34256788)
chr8 (14-223)||(1746298-1746516)
chr8 (14-221)||(19945439-19945656)
chr8 (232-452)||(10688661-10688884)
chr8 (3-221)||(42498066-42498292)
chr8 (30-254)||(43036263-43036494)
chr8 (3-221)||(15212658-15212884)
chr8 (3-221)||(12702704-12702934)
chr8 (391-518)||(31042904-31043032)
chr8 (28-223)||(27811148-27811351)
chr8 (439-502)||(7412876-7412939)
chr8 (3-223)||(33352020-33352248)
chr8 (331-507)||(35745794-35745971)
chr8 (457-513)||(25689562-25689618)
chr8 (3-97)||(44353796-44353891)
chr8 (3-221)||(4731530-4731756)
chr8 (3-100)||(9765745-9765843)
chr8 (1-100)||(30291606-30291707)
chr8 (29-209)||(10929685-10929871)
chr8 (144-221)||(30143214-30143289)
chr8 (3-100)||(4283524-4283622)
chr8 (457-513)||(10688619-10688675)
chr8 (3-100)||(19491769-19491867)
chr8 (157-221)||(19948554-19948617)
chr8 (28-98)||(40321082-40321153)
chr8 (3-100)||(42435061-42435159)
chr8 (61-100)||(8965820-8965859)
chr8 (1-100)||(18141821-18141920)
chr8 (457-507)||(5701959-5702009)
chr8 (3-94)||(30143346-30143438)
chr8 (279-386)||(31043017-31043125)
chr8 (3-209)||(6598856-6599070)
chr8 (3-209)||(6674309-6674523)
chr8 (3-100)||(1292533-1292631)
chr8 (28-95)||(1822297-1822365)
chr8 (28-95)||(1856742-1856810)
chr8 (3-100)||(3303740-3303838)
chr8 (124-219)||(4733683-4733777)
chr8 (3-100)||(18655400-18655498)
chr8 (3-100)||(40221745-40221843)
chr8 (235-312)||(31043112-31043189)
chr8 (457-502)||(4456575-4456620)
chr8 (14-96)||(41364927-41365011)
chr8 (28-76)||(6813771-6813818)
chr8 (28-95)||(10240159-10240227)
chr8 (24-95)||(29796413-29796485)
chr8 (3-96)||(41366684-41366778)
[»] chr6 (70 HSPs)
chr6 (3-513)||(16578589-16579100)
chr6 (3-513)||(16616280-16616791)
chr6 (3-513)||(16554455-16554966)
chr6 (3-513)||(16631011-16631522)
chr6 (9-513)||(6026835-6027337)
chr6 (9-513)||(33342183-33342687)
chr6 (3-452)||(16652759-16653209)
chr6 (9-513)||(34166667-34167170)
chr6 (1-506)||(27647476-27647960)
chr6 (9-513)||(34164445-34164948)
chr6 (9-406)||(25421000-25421396)
chr6 (3-506)||(411694-412200)
chr6 (3-506)||(3072829-3073334)
chr6 (231-513)||(6136263-6136546)
chr6 (278-513)||(25420798-25421034)
chr6 (295-506)||(13150857-13151070)
chr6 (3-501)||(2171602-2172090)
chr6 (234-502)||(5674242-5674512)
chr6 (21-291)||(6097528-6097800)
chr6 (241-513)||(11857292-11857566)
chr6 (9-120)||(13153893-13154005)
chr6 (3-221)||(31404745-31404970)
chr6 (235-502)||(22709362-22709632)
chr6 (348-513)||(30125019-30125185)
chr6 (3-221)||(5406270-5406494)
chr6 (3-221)||(5410595-5410819)
chr6 (241-513)||(22010190-22010465)
chr6 (296-452)||(5266453-5266610)
chr6 (335-513)||(14741927-14742106)
chr6 (28-221)||(16452424-16452625)
chr6 (14-221)||(30834616-30834832)
chr6 (331-513)||(6438899-6439082)
chr6 (3-221)||(5413464-5413688)
chr6 (405-513)||(34151829-34151938)
chr6 (389-506)||(6097860-6097977)
chr6 (25-209)||(16568927-16569110)
chr6 (277-413)||(28155172-28155309)
chr6 (277-507)||(16839092-16839323)
chr6 (3-221)||(9183101-9183327)
chr6 (3-223)||(33160422-33160652)
chr6 (331-507)||(33329940-33330117)
chr6 (457-513)||(16652717-16652773)
chr6 (331-409)||(6005822-6005901)
chr6 (331-409)||(33335535-33335614)
chr6 (297-367)||(6097786-6097858)
chr6 (3-100)||(2973009-2973107)
chr6 (3-100)||(21588931-21589029)
chr6 (3-100)||(21593664-21593762)
chr6 (438-502)||(23896880-23896944)
chr6 (438-506)||(26253598-26253666)
chr6 (30-100)||(4045423-4045494)
chr6 (331-409)||(5343880-5343959)
chr6 (1-100)||(3038971-3039071)
chr6 (241-406)||(14737174-14737342)
chr6 (33-209)||(16567090-16567265)
chr6 (3-97)||(17758026-17758121)
chr6 (457-513)||(14737086-14737142)
chr6 (3-100)||(22424895-22424995)
chr6 (28-186)||(28137503-28137669)
chr6 (3-100)||(3808778-3808877)
chr6 (29-100)||(17762990-17763062)
chr6 (440-507)||(5343990-5344057)
chr6 (457-507)||(5016976-5017026)
chr6 (3-98)||(26830193-26830289)
chr6 (457-507)||(31085953-31086003)
chr6 (124-221)||(33211385-33211481)
chr6 (3-97)||(5043630-5043725)
chr6 (29-97)||(26954382-26954450)
chr6 (277-386)||(26253698-26253808)
chr6 (459-507)||(28155097-28155145)
[»] chr1 (78 HSPs)
chr1 (1-513)||(9036004-9036516)
chr1 (9-513)||(44203219-44203722)
chr1 (1-513)||(21053541-21054058)
chr1 (1-506)||(40281967-40282477)
chr1 (1-506)||(20622305-20622812)
chr1 (3-506)||(9986794-9987299)
chr1 (3-498)||(51765007-51765495)
chr1 (255-452)||(24793709-24793906)
chr1 (331-513)||(44023378-44023561)
chr1 (235-502)||(19365781-19366051)
chr1 (241-406)||(24786933-24787100)
chr1 (331-513)||(39445898-39446081)
chr1 (297-502)||(19360925-19361133)
chr1 (235-386)||(24202360-24202513)
chr1 (19-221)||(20762544-20762755)
chr1 (331-507)||(25439406-25439583)
chr1 (331-502)||(41391002-41391173)
chr1 (331-507)||(25444599-25444776)
chr1 (331-513)||(1054515-1054698)
chr1 (3-223)||(3156736-3156963)
chr1 (3-221)||(28220296-28220522)
chr1 (3-221)||(3189203-3189428)
chr1 (3-221)||(3198020-3198245)
chr1 (3-221)||(3206859-3207084)
chr1 (14-101)||(13316432-13316521)
chr1 (390-502)||(24202264-24202376)
chr1 (438-506)||(13604104-13604172)
chr1 (4-254)||(31659078-31659335)
chr1 (26-221)||(37503647-37503850)
chr1 (124-221)||(13316518-13316614)
chr1 (3-254)||(44454999-44455258)
chr1 (3-209)||(8550857-8551071)
chr1 (3-221)||(28223491-28223717)
chr1 (331-406)||(41398657-41398733)
chr1 (3-100)||(37168297-37168396)
chr1 (3-209)||(834237-834451)
chr1 (3-100)||(49918350-49918448)
chr1 (3-100)||(7482300-7482399)
chr1 (1-100)||(28265622-28265722)
chr1 (3-221)||(37559938-37560165)
chr1 (3-221)||(1833394-1833620)
chr1 (29-100)||(50169306-50169378)
chr1 (3-209)||(196978-197192)
chr1 (3-209)||(3847191-3847405)
chr1 (3-100)||(4552707-4552805)
chr1 (3-100)||(13547159-13547257)
chr1 (457-513)||(24793667-24793723)
chr1 (30-100)||(37033170-37033241)
chr1 (3-100)||(41360914-41361012)
chr1 (3-100)||(47255410-47255508)
chr1 (27-100)||(37879005-37879079)
chr1 (331-409)||(43988054-43988133)
chr1 (14-100)||(47115171-47115260)
chr1 (28-97)||(8871143-8871213)
chr1 (28-100)||(11348698-11348771)
chr1 (457-507)||(13598967-13599017)
chr1 (3-100)||(19754494-19754593)
chr1 (28-100)||(29136247-29136320)
chr1 (457-502)||(21536125-21536170)
chr1 (14-78)||(48382441-48382505)
chr1 (28-79)||(928071-928123)
chr1 (20-86)||(3460710-3460778)
chr1 (3-100)||(13549070-13549168)
chr1 (3-100)||(23555335-23555433)
chr1 (3-100)||(31925777-31925875)
chr1 (19-82)||(32736952-32737015)
chr1 (19-82)||(35109493-35109556)
chr1 (457-501)||(37070334-37070378)
chr1 (3-100)||(42298045-42298143)
chr1 (14-95)||(22079322-22079404)
chr1 (124-221)||(10925095-10925191)
chr1 (3-95)||(12318592-12318685)
chr1 (28-100)||(34603576-34603649)
chr1 (28-100)||(50167270-50167343)
chr1 (438-507)||(26644381-26644450)
chr1 (457-502)||(41398764-41398809)
chr1 (148-221)||(49918221-49918292)
chr1 (3-100)||(30476516-30476614)
[»] chr5 (73 HSPs)
chr5 (3-513)||(10592845-10593355)
chr5 (9-513)||(25077707-25078211)
chr5 (9-513)||(25135676-25136180)
chr5 (9-513)||(40379679-40380181)
chr5 (9-513)||(40381890-40382392)
chr5 (9-513)||(16546217-16546721)
chr5 (9-513)||(16543995-16544499)
chr5 (1-513)||(22536358-22536851)
chr5 (1-506)||(29751228-29751715)
chr5 (1-506)||(29719974-29720464)
chr5 (3-506)||(18441718-18442224)
chr5 (3-506)||(9789294-9789800)
chr5 (1-292)||(29722332-29722624)
chr5 (3-502)||(26177479-26177980)
chr5 (21-502)||(26170370-26170853)
chr5 (3-502)||(16409090-16409573)
chr5 (255-513)||(43599058-43599317)
chr5 (255-513)||(43604550-43604809)
chr5 (255-513)||(43610042-43610301)
chr5 (241-513)||(27450134-27450408)
chr5 (240-501)||(24136207-24136470)
chr5 (241-513)||(27445291-27445565)
chr5 (241-452)||(43592597-43592811)
chr5 (337-506)||(29722161-29722332)
chr5 (241-513)||(1456639-1456914)
chr5 (3-221)||(25412634-25412858)
chr5 (331-513)||(30631764-30631947)
chr5 (235-386)||(35388016-35388169)
chr5 (14-221)||(13342933-13343149)
chr5 (331-513)||(15045096-15045278)
chr5 (28-255)||(30182428-30182661)
chr5 (14-221)||(36074122-36074340)
chr5 (235-413)||(38219752-38219928)
chr5 (391-506)||(29752266-29752381)
chr5 (297-502)||(16407654-16407862)
chr5 (337-513)||(29402551-29402728)
chr5 (331-507)||(28807083-28807260)
chr5 (332-502)||(37556137-37556308)
chr5 (3-221)||(13488075-13488301)
chr5 (3-221)||(39468619-39468845)
chr5 (241-406)||(31180573-31180741)
chr5 (3-227)||(13239618-13239849)
chr5 (1-219)||(32636698-32636924)
chr5 (332-502)||(37560959-37561130)
chr5 (20-221)||(30683010-30683216)
chr5 (14-100)||(13695771-13695859)
chr5 (3-209)||(31182857-31183069)
chr5 (331-507)||(2785778-2785955)
chr5 (390-502)||(15465000-15465112)
chr5 (3-254)||(28750725-28750984)
chr5 (331-507)||(33768587-33768764)
chr5 (331-507)||(33791719-33791896)
chr5 (3-221)||(42428500-42428726)
chr5 (351-502)||(9352820-9352972)
chr5 (3-100)||(213465-213563)
chr5 (438-502)||(36931856-36931920)
chr5 (3-209)||(16451965-16452178)
chr5 (3-221)||(533641-533867)
chr5 (457-513)||(31180773-31180829)
chr5 (3-185)||(33831588-33831778)
chr5 (3-81)||(37439161-37439239)
chr5 (3-100)||(40147261-40147359)
chr5 (457-513)||(43592797-43592853)
chr5 (457-507)||(14520796-14520846)
chr5 (28-100)||(28278316-28278389)
chr5 (28-96)||(38747009-38747078)
chr5 (3-217)||(537901-538123)
chr5 (3-97)||(9049412-9049506)
chr5 (3-217)||(42426305-42426527)
chr5 (190-254)||(16407886-16407949)
chr5 (3-100)||(27637682-27637781)
chr5 (3-97)||(8566016-8566111)
chr5 (48-100)||(27015531-27015583)
[»] chr7 (85 HSPs)
chr7 (9-513)||(6592418-6592920)
chr7 (9-513)||(6594636-6595136)
chr7 (9-513)||(18392274-18392779)
chr7 (3-513)||(20343501-20343994)
chr7 (30-513)||(1562103-1562586)
chr7 (1-506)||(24789435-24789941)
chr7 (9-413)||(18388838-18389243)
chr7 (17-513)||(32060410-32060887)
chr7 (3-502)||(43504224-43504708)
chr7 (3-502)||(39730946-39731467)
chr7 (232-513)||(2058321-2058603)
chr7 (3-474)||(25767030-25767505)
chr7 (235-502)||(21646360-21646630)
chr7 (296-513)||(21640204-21640422)
chr7 (296-513)||(20357029-20357247)
chr7 (233-468)||(1532950-1533187)
chr7 (255-513)||(12406597-12406856)
chr7 (241-513)||(4873445-4873720)
chr7 (3-291)||(48408605-48408902)
chr7 (235-502)||(18409116-18409386)
chr7 (241-502)||(24023831-24024093)
chr7 (3-221)||(35853787-35854012)
chr7 (14-227)||(29990921-29991141)
chr7 (235-502)||(18413992-18414262)
chr7 (241-513)||(31109071-31109347)
chr7 (331-502)||(21811751-21811923)
chr7 (14-221)||(4178647-4178862)
chr7 (297-502)||(48408411-48408619)
chr7 (1-303)||(30024800-30025110)
chr7 (241-513)||(12397229-12397491)
chr7 (3-221)||(14069903-14070129)
chr7 (3-221)||(14379931-14380157)
chr7 (98-254)||(24514934-24515088)
chr7 (235-502)||(2479678-2479947)
chr7 (3-221)||(23554912-23555138)
chr7 (3-221)||(47674013-47674239)
chr7 (28-254)||(48491418-48491652)
chr7 (331-507)||(24265684-24265861)
chr7 (351-502)||(47264102-47264254)
chr7 (3-221)||(47676206-47676432)
chr7 (3-221)||(1113529-1113755)
chr7 (28-227)||(4586027-4586234)
chr7 (3-220)||(19502051-19502276)
chr7 (3-209)||(38671292-38671506)
chr7 (3-100)||(41317504-41317602)
chr7 (3-170)||(25615785-25615951)
chr7 (28-221)||(43864116-43864317)
chr7 (28-100)||(23343975-23344048)
chr7 (29-100)||(24525992-24526065)
chr7 (3-100)||(2361042-2361140)
chr7 (3-100)||(18126644-18126742)
chr7 (3-100)||(27347817-27347915)
chr7 (3-100)||(29608737-29608835)
chr7 (3-100)||(34310786-34310884)
chr7 (3-209)||(41649081-41649293)
chr7 (438-502)||(44847632-44847696)
chr7 (3-100)||(4253598-4253697)
chr7 (331-409)||(16880476-16880555)
chr7 (331-409)||(16885331-16885410)
chr7 (458-513)||(18390506-18390561)
chr7 (4-100)||(22269973-22270070)
chr7 (331-409)||(24260926-24261005)
chr7 (3-223)||(31733039-31733267)
chr7 (438-507)||(21983790-21983859)
chr7 (3-100)||(26417316-26417414)
chr7 (28-254)||(48489270-48489504)
chr7 (3-100)||(8359386-8359485)
chr7 (28-100)||(12097954-12098027)
chr7 (14-95)||(22328471-22328556)
chr7 (29-100)||(8153342-8153414)
chr7 (29-100)||(48599430-48599502)
chr7 (456-501)||(49092237-49092282)
chr7 (454-502)||(1532897-1532945)
chr7 (3-100)||(4508776-4508874)
chr7 (3-100)||(6431971-6432069)
chr7 (438-502)||(21989454-21989518)
chr7 (3-100)||(36146478-36146576)
chr7 (457-507)||(79955-80005)
chr7 (29-100)||(3258995-3259067)
chr7 (28-81)||(28617182-28617234)
chr7 (3-97)||(31105463-31105558)
chr7 (277-313)||(4512959-4512995)
chr7 (157-217)||(18126520-18126579)
chr7 (3-81)||(23565131-23565210)
chr7 (3-100)||(31518795-31518893)
[»] scaffold0565 (1 HSPs)
scaffold0565 (9-513)||(2682-3184)
[»] chr2 (54 HSPs)
chr2 (9-513)||(12647464-12647966)
chr2 (1-506)||(6266283-6266791)
chr2 (3-502)||(32289161-32289662)
chr2 (3-502)||(4484400-4484910)
chr2 (3-502)||(30832934-30833444)
chr2 (241-513)||(9295863-9296137)
chr2 (235-513)||(14291844-14292124)
chr2 (3-120)||(13656103-13656220)
chr2 (234-513)||(11098388-11098669)
chr2 (235-502)||(3492094-3492364)
chr2 (235-502)||(25409983-25410253)
chr2 (14-221)||(36205744-36205959)
chr2 (14-221)||(45099627-45099843)
chr2 (3-221)||(5723326-5723550)
chr2 (241-513)||(39811478-39811753)
chr2 (14-221)||(4503212-4503428)
chr2 (277-502)||(40739217-40739444)
chr2 (3-311)||(2334488-2334803)
chr2 (3-221)||(36988146-36988371)
chr2 (391-513)||(32247229-32247351)
chr2 (3-209)||(42362236-42362450)
chr2 (437-513)||(44310472-44310548)
chr2 (1-100)||(29867869-29867969)
chr2 (28-221)||(38312112-38312313)
chr2 (14-209)||(11690385-11690589)
chr2 (25-100)||(13121769-13121845)
chr2 (3-209)||(14633895-14634110)
chr2 (3-221)||(6595076-6595302)
chr2 (3-97)||(34139840-34139936)
chr2 (3-209)||(723814-724028)
chr2 (3-100)||(45726929-45727027)
chr2 (331-409)||(19344825-19344904)
chr2 (331-409)||(19349683-19349762)
chr2 (1-209)||(11151659-11151875)
chr2 (124-221)||(39284757-39284853)
chr2 (457-507)||(39483443-39483493)
chr2 (14-100)||(24398055-24398145)
chr2 (19-100)||(26353184-26353267)
chr2 (457-507)||(8389631-8389681)
chr2 (1-100)||(36773562-36773662)
chr2 (20-95)||(33648176-33648253)
chr2 (455-507)||(36757425-36757477)
chr2 (455-502)||(28258682-28258729)
chr2 (457-507)||(10706733-10706783)
chr2 (457-507)||(21630511-21630561)
chr2 (28-100)||(33162545-33162618)
chr2 (457-507)||(33528105-33528155)
chr2 (28-100)||(42288205-42288278)
chr2 (29-96)||(14202501-14202569)
chr2 (3-100)||(11067305-11067403)
chr2 (463-507)||(20522794-20522838)
chr2 (30-82)||(28770730-28770781)
chr2 (3-100)||(35446954-35447052)
chr2 (3-100)||(36318079-36318177)
[»] chr4 (88 HSPs)
chr4 (9-518)||(7122263-7122773)
chr4 (3-513)||(8395192-8395700)
chr4 (3-513)||(8392983-8393491)
chr4 (9-513)||(5137876-5138380)
chr4 (9-513)||(5135650-5136155)
chr4 (3-506)||(31495386-31495893)
chr4 (3-502)||(13992363-13992866)
chr4 (9-217)||(7124785-7124992)
chr4 (323-513)||(7124490-7124681)
chr4 (234-513)||(24742295-24742576)
chr4 (241-513)||(51520775-51521049)
chr4 (241-513)||(56141512-56141788)
chr4 (241-513)||(9228687-9228962)
chr4 (277-502)||(28467990-28468217)
chr4 (255-513)||(9223900-9224159)
chr4 (3-221)||(29999876-30000101)
chr4 (297-452)||(29761040-29761196)
chr4 (331-513)||(18856125-18856308)
chr4 (331-507)||(45347324-45347501)
chr4 (331-513)||(3814422-3814604)
chr4 (3-221)||(56178707-56178932)
chr4 (331-513)||(5733062-5733246)
chr4 (3-221)||(9927528-9927753)
chr4 (28-221)||(52095457-52095658)
chr4 (19-311)||(48142823-48143126)
chr4 (335-474)||(18712295-18712435)
chr4 (28-223)||(34570509-34570712)
chr4 (3-221)||(37740498-37740723)
chr4 (3-220)||(54199976-54200201)
chr4 (28-221)||(12739645-12739846)
chr4 (28-221)||(12747851-12748052)
chr4 (439-513)||(18860446-18860520)
chr4 (28-221)||(52082752-52082953)
chr4 (28-221)||(5429551-5429752)
chr4 (3-221)||(5370153-5370382)
chr4 (3-100)||(26364236-26364334)
chr4 (204-386)||(31985236-31985419)
chr4 (331-410)||(45356902-45356982)
chr4 (3-100)||(36994524-36994622)
chr4 (3-100)||(40632445-40632543)
chr4 (1-98)||(46147459-46147557)
chr4 (3-100)||(37229791-37229890)
chr4 (3-96)||(2209717-2209812)
chr4 (28-93)||(5207937-5208003)
chr4 (1-100)||(36463457-36463557)
chr4 (3-100)||(41964415-41964514)
chr4 (3-100)||(46703500-46703599)
chr4 (19-100)||(47038496-47038577)
chr4 (454-507)||(8689044-8689097)
chr4 (29-100)||(45687278-45687351)
chr4 (144-221)||(52093885-52093960)
chr4 (455-507)||(5143807-5143859)
chr4 (3-100)||(12073392-12073490)
chr4 (3-81)||(12743995-12744073)
chr4 (3-81)||(12744117-12744195)
chr4 (3-81)||(12745384-12745462)
chr4 (3-100)||(12745506-12745604)
chr4 (3-221)||(26175706-26175932)
chr4 (438-502)||(31985140-31985204)
chr4 (3-100)||(54883020-54883118)
chr4 (14-98)||(12119540-12119627)
chr4 (457-507)||(16628353-16628403)
chr4 (457-507)||(38151918-38151968)
chr4 (28-100)||(41639426-41639499)
chr4 (458-507)||(3778116-3778165)
chr4 (438-507)||(5148225-5148294)
chr4 (14-85)||(26699523-26699596)
chr4 (28-96)||(48142473-48142542)
chr4 (4-97)||(379383-379477)
chr4 (3-100)||(4587958-4588057)
chr4 (3-100)||(8665408-8665506)
chr4 (456-507)||(5268699-5268750)
chr4 (457-507)||(9194164-9194215)
chr4 (4-100)||(24969112-24969209)
chr4 (12-100)||(41639263-41639353)
chr4 (28-86)||(1983252-1983309)
chr4 (3-100)||(6542249-6542349)
chr4 (457-507)||(6742896-6742946)
chr4 (457-507)||(10047932-10047982)
chr4 (457-507)||(16622774-16622824)
chr4 (28-100)||(27417060-27417133)
chr4 (14-95)||(44967910-44967992)
chr4 (3-82)||(6655975-6656054)
chr4 (1-100)||(48893706-48893810)
chr4 (235-335)||(5268852-5268955)
chr4 (31-82)||(5349929-5349980)
chr4 (3-100)||(31474150-31474249)
chr4 (14-100)||(55085445-55085532)
[»] scaffold0674 (1 HSPs)
scaffold0674 (9-513)||(3804-4309)
[»] scaffold0137 (1 HSPs)
scaffold0137 (9-513)||(5860-6363)
[»] scaffold0491 (2 HSPs)
scaffold0491 (3-502)||(11231-11740)
scaffold0491 (3-502)||(8805-9295)
[»] scaffold1519 (1 HSPs)
scaffold1519 (14-474)||(523-1004)
[»] scaffold0286 (2 HSPs)
scaffold0286 (150-501)||(21953-22286)
scaffold0286 (3-100)||(11557-11655)
[»] scaffold0188 (1 HSPs)
scaffold0188 (297-502)||(17444-17652)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-221)||(434405-434631)
[»] scaffold0464 (1 HSPs)
scaffold0464 (331-513)||(761-944)
[»] scaffold0355 (1 HSPs)
scaffold0355 (255-513)||(3338-3597)
[»] scaffold0135 (1 HSPs)
scaffold0135 (255-513)||(34555-34814)
[»] scaffold1455 (1 HSPs)
scaffold1455 (439-513)||(1710-1784)
[»] scaffold0259 (1 HSPs)
scaffold0259 (231-507)||(1746-2025)
[»] scaffold0028 (1 HSPs)
scaffold0028 (231-507)||(148451-148730)
[»] scaffold0016 (2 HSPs)
scaffold0016 (3-100)||(114602-114700)
scaffold0016 (19-82)||(102450-102513)
[»] scaffold0006 (4 HSPs)
scaffold0006 (438-506)||(132761-132829)
scaffold0006 (457-507)||(6252-6302)
scaffold0006 (457-507)||(3060-3110)
scaffold0006 (235-335)||(2835-2938)
[»] scaffold0197 (2 HSPs)
scaffold0197 (331-507)||(13791-13968)
scaffold0197 (298-409)||(18769-18880)
[»] scaffold0009 (1 HSPs)
scaffold0009 (331-507)||(176457-176634)
[»] scaffold0510 (1 HSPs)
scaffold0510 (438-502)||(1096-1160)
[»] scaffold0140 (1 HSPs)
scaffold0140 (438-502)||(7924-7988)
[»] scaffold0665 (2 HSPs)
scaffold0665 (335-406)||(8112-8184)
scaffold0665 (457-513)||(8216-8272)
[»] scaffold0087 (2 HSPs)
scaffold0087 (438-502)||(43447-43511)
scaffold0087 (455-507)||(36332-36384)
[»] scaffold0066 (2 HSPs)
scaffold0066 (1-100)||(20483-20583)
scaffold0066 (144-221)||(20636-20711)
[»] scaffold0176 (1 HSPs)
scaffold0176 (29-100)||(18099-18171)
[»] scaffold0466 (1 HSPs)
scaffold0466 (3-100)||(7327-7425)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-96)||(80353-80447)
[»] scaffold0098 (1 HSPs)
scaffold0098 (455-502)||(45744-45791)


Alignment Details
Target: chr3 (Bit Score: 419; Significance: 0; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 513
Target Start/End: Complemental strand, 54635224 - 54634711
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54635224 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 54635125  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  54635124 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgat 54635025  T
Q  201 ttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54635024 ttcccaagtctctctctcttccaactccctcttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 54634925  T
Q  301 gtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgcc 399  Q
    |||||| ||||||||| |  |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  54634924 gtgtcatgatttgcgtaccacccaagaaaagaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgcc 54634825  T
Q  400 acgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
    ||||||||||| |||| |||| |||||||| ||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||||||    
T  54634824 acgattttgca-ccctgcaacttagctcacggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 54634726  T
Q  499 gaagacaatctcaac 513  Q
    |||||||||||||||    
T  54634725 gaagacaatctcaac 54634711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 1 - 513
Target Start/End: Complemental strand, 6716599 - 6716086
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6716599 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 6716500  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  6716499 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgat 6716400  T
Q  201 ttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    ||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  6716399 ttcccaagtctctctctcttccaaccctttcttcaaatctgcacaagaacactttatactagtcttcctctgttgaaatcgtgtcacgattttccaaatc 6716300  T
Q  301 gtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgcc 399  Q
    ||||||||||  |||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |    
T  6716299 gtgtcacgatccgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgac 6716200  T
Q  400 acgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
    ||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  6716199 acgattttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 6716101  T
Q  499 gaagacaatctcaac 513  Q
     ||||||||||||||    
T  6716100 caagacaatctcaac 6716086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 3617540 - 3617035
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3617540 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 3617441  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  3617440 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 3617342  T
Q  209 tctctctctcttccaactcccact--tcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtc 305  Q
    |||||||||  ||||||  | |||  |||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3617341 tctctctct--tccaacctctactcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtc 3617244  T
Q  306 acgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgat 404  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||     
T  3617243 acgatttgcgtccgtcccaaggaacgaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacga- 3617145  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  3617144 tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 3617045  T
Q  504 caatctcaac 513  Q
    ||||||||||    
T  3617044 caatctcaac 3617035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 25637517 - 25637014
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25637517 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 25637418  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | | |||||||||||||||||    
T  25637417 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagatac-ccctttgatttcccaag 25637321  T
Q  209 tctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcac 307  Q
    |||||||||||||||||  || |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  25637320 tctctctctcttccaacctcctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcac 25637221  T
Q  308 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgattt 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||    
T  25637220 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacga-tt 25637122  T
Q  407 tgcacccctacaa-cctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    ||||||||| ||| |||||||| | ||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  25637121 tgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagac 25637023  T
Q  505 aatctcaac 513  Q
    |||||||||    
T  25637022 aatctcaac 25637014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 4600822 - 4601327
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4600822 ttacaaaaggaatacaaaaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 4600921  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  4600922 aatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaa 4601018  T
Q  208 gtctctctctcttccaactcccac--ttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgt 304  Q
    ||||||||||  ||||||||   |  ||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4601019 gtctctctct--tccaactctttcctttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgt 4601116  T
Q  305 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc--aaatcgtgccacg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||||    
T  4601117 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacg 4601216  T
Q  403 attttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    | ||||||||||| ||| |||||||||| ||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  4601217 a-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaa 4601315  T
Q  502 gacaatctcaac 513  Q
    ||||||||||||    
T  4601316 gacaatctcaac 4601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 4598601 - 4599106
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4598601 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 4598700  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  4598701 aatgattctctct--acagggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaa 4598797  T
Q  208 gtctctctctcttccaactcccac--ttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgt 304  Q
    ||||||||||  |||||||| | |  ||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4598798 gtctctctct--tccaactctctcctttcaaatctgcacaagaacacttaagtactagtcttcctctgtttcaatcgtgtcacgattttcccaatcgtgt 4598895  T
Q  305 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc--aaatcgtgccacg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||||    
T  4598896 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacg 4598995  T
Q  403 attttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    | ||||||||||| ||| |||||||||| ||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  4598996 a-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaa 4599094  T
Q  502 gacaatctcaac 513  Q
    ||||||||||||    
T  4599095 gacaatctcaac 4599106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 13 - 452
Target Start/End: Complemental strand, 45283070 - 45282628
Alignment:
Q  13 aaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45283070 aaaagggatacaaaaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatga 45282971  T
Q  113 ttctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctc 212  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||| ||||||||||    
T  45282970 ttctctctttgcaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattccccaagtctc 45282871  T
Q  213 tct--ctcttccaactcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgat 310  Q
    |||  |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45282870 tctctctcttccaactctctcttcaaatctgcacaagaacactttatactagccttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgat 45282771  T
Q  311 ttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgattttgc 409  Q
     ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| |||||    
T  45282770 ctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgc 45282671  T
Q  410 acccctacaacctagctcacagca-cccgaaatcgtgtcacgat 452  Q
    | |||| ||||||||||||| ||| |||||||||||||||||||    
T  45282670 a-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10056309 - 10055806
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10056309 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10056210  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  10056209 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 10056113  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  10056112 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 10056015  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  10056014 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 10055916  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10055915 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 10055816  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  10055815 caaactcaac 10055806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10067419 - 10066916
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10067419 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10067320  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  10067319 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 10067223  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  10067222 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 10067125  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  10067124 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 10067026  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10067025 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 10066926  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  10066925 caaactcaac 10066916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10211485 - 10210979
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10211485 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10211386  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10211385 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaa 10211289  T
Q  208 gtctctctctcttccaactccc---acttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtg 303  Q
    ||||||||||  ||||||  |    ||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  10211288 gtctctctct--tccaacctcttttacttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtg 10211191  T
Q  304 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccac 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||  || ||||||||||||    
T  10211190 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccac 10211091  T
Q  402 gattttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttga 500  Q
    || ||||||||||| ||| |||| ||||| ||| || |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |    
T  10211090 ga-tttgcacccctgcaaccctaactcacggcatcctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaa 10210992  T
Q  501 agacaatctcaac 513  Q
    |||||||||||||    
T  10210991 agacaatctcaac 10210979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10058531 - 10058028
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10058531 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10058432  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  10058431 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 10058335  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  10058334 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 10058237  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  10058236 cgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 10058138  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10058137 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 10058038  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  10058037 caaactcaac 10058028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10060753 - 10060250
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10060753 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10060654  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  10060653 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 10060557  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  10060556 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 10060459  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  10060458 cgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 10060360  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10060359 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 10060260  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  10060259 caaactcaac 10060250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10062975 - 10062472
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10062975 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10062876  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  10062875 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 10062779  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  10062778 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 10062681  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  10062680 cgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 10062582  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10062581 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 10062482  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  10062481 caaactcaac 10062472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10065197 - 10064694
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10065197 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10065098  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  10065097 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 10065001  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  10065000 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 10064903  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  10064902 cgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 10064804  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10064803 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 10064704  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  10064703 caaactcaac 10064694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 66 - 452
Target Start/End: Complemental strand, 6718718 - 6718331
Alignment:
Q  66 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718718 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatc 6718619  T
Q  166 aaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactttatactagcct 265  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||| ||    
T  6718618 aaagaaccctaaaccctagagttactccctttgatttcccaagtctctctctcttccaaccctttcttcaaatctgcacaagaacactttatactagtct 6718519  T
Q  266 tcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagt 365  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||  |||| |  |||||| ||||||||||||||||||||||||||||||||||||||    
T  6718518 tcctctgttgaaatcgtgtcacgatttttcaaatcgtgtcacgatccgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagt 6718419  T
Q  366 ttcacgatcgtgtcacaatttccca-aatcgtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgat 452  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||    
T  6718418 ttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 10209265 - 10208779
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    ||||||||||  ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10209265 ttacaaaaggactacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 10209166  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10209165 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaa 10209069  T
Q  208 gtctctctctcttccaa---ctcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtg 303  Q
    |  ||||||||||||||   ||   ||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||                    
T  10209068 g--tctctctcttccaacctcttttacttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcac---------------- 10208987  T
Q  304 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccac 401  Q
        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||  || ||||||||||||    
T  10208986 ----gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccac 10208891  T
Q  402 gattttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttga 500  Q
    || ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  10208890 ga-tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttga 10208792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 3 - 506
Target Start/End: Complemental strand, 801190 - 800694
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  801190 gagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttctacccttttcccaatctcacca 801092  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttg 198  Q
    ||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||| || |||| ||||||    
T  801091 agacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actctaaaccctagagtttcttcctttg 800993  T
Q  199 atttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    ||||||||||| ||||||||            |||||||| |||||||||||||||  ||| ||||| ||  ||| |  ||||||||||||| |||||      
T  800992 atttcccaagtttctctctc------------cttcaaatatgcacaagaacacttaaatattagccctctactgataaaatcgtgtcacga-tttccag 800906  T
Q  298 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatc 394  Q
      ||||||||||||  ||||| ||||||||| |||||||| ||||||||| ||| |||||||||||||||||    |||||||||| |||||||| ||||    
T  800905 gccgtgtcacgattggtgcgttcgtcccaagaaacgaccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 800806  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| |||||||  ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  800805 gtgtcacgatttggcacccc-gcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 800707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 3 - 502
Target Start/End: Original strand, 23200208 - 23200716
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcacca 99  Q
    |||||||||||||| | |||||||||| ||||||||||||||||| ||||||||||||| |||||| | |||||||||||| |||| |||||||||||||    
T  23200208 gagttcttacaaaaag-atacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ctctaatttctaccatttttcccaatctcacca 23200305  T
Q  100 aga------cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
    |||      |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| || | |||    
T  23200306 agaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctc 23200404  T
Q  193 cctttgatttcccaagtctctctctcttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgat 290  Q
    ||||||||||||||||| ||||||||||||||||| |  |||||| ||||||||| ||||||| | ||| || ||||| ||| |  ||||||||||||||    
T  23200405 cctttgatttcccaagtttctctctcttccaactctc--ttcaaaatctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgat 23200502  T
Q  291 tttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttc- 387  Q
    || || ||||||||||||||| |  |||  ||| ||||| ||||||||||||||||  ||| |||||||||||||||||    |||||||||| ||| |     
T  23200503 tt-ccaaatcgtgtcacgattggtacgtaagtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcct 23200601  T
Q  388 ccaaatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttcca 486  Q
    |||||||||| |||||||| |||||| | ||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||| ||||| |||||||||||    
T  23200602 ccaaatcgtgtcacgatttggcaccc-tgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttcca 23200700  T
Q  487 taccacaaatttgaag 502  Q
     |||||||||||||||    
T  23200701 gaccacaaatttgaag 23200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 3 - 502
Target Start/End: Original strand, 23198009 - 23198517
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcacca 99  Q
    |||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||  ||||| | |||||||||||| |||| |||||||||||||    
T  23198009 gagttcttacaaaaag-atacaaaagggttacaagaaattagctttgacaagttcacaaaaaacaa-ctctaatttctaccatttttcccaatctcacca 23198106  T
Q  100 aga------cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
    |||      |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| || | |||    
T  23198107 agaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctc 23198205  T
Q  193 cctttgatttcccaagtctctctctcttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgat 290  Q
    |||||||||| |||||| ||||||||||||||||| |  |||||| ||||||||||||||||| | |||||| ||||| ||| |  ||||||||||||||    
T  23198206 cctttgattttccaagtttctctctcttccaactctc--ttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgat 23198303  T
Q  291 tttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttc- 387  Q
    || || ||||||||||||||| |  ||| |||| ||||| ||||||||||||||||  ||| |||||||||||||||||    |||||||||| ||| |     
T  23198304 tt-ccaaatcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcct 23198402  T
Q  388 ccaaatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttcca 486  Q
    |||||||||| |||||||| |||||| | ||| | ||||||| ||| | | |||||||||||||||  |||| ||||||||| ||||| |||||||||||    
T  23198403 ccaaatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttcca 23198501  T
Q  487 taccacaaatttgaag 502  Q
     |||||||||||||||    
T  23198502 gaccacaaatttgaag 23198517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 242 - 513
Target Start/End: Original strand, 8477729 - 8478001
Alignment:
Q  242 cacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtcct 340  Q
    ||||||||||||| | ||||||||||||||||  |||||||||||||||||| ||  ||||||||||||||||||| |  ||||||| | ||||||||||    
T  8477729 cacaagaacacttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtcct 8477827  T
Q  341 tatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cga 438  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| |||  ||  ||| ||||||||| ||||| |||    
T  8477828 tatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggca-tccagcaaactagctcacggcacctcga 8477926  T
Q  439 aatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||    
T  8477927 aatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaatgtcaac 8478001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 234 - 513
Target Start/End: Complemental strand, 40372538 - 40372257
Alignment:
Q  234 caaatctgcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||  | |||||||| |||||||||  | |||||||||||||||| ||  |||||| |||||||||||||||| || ||| | |    
T  40372538 caaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtggcacgatttgcgtccgttcccaggtatg 40372440  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| |||||||||     
T  40372439 accagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacg 40372341  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  40372340 gcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 40372257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 234 - 513
Target Start/End: Original strand, 7167600 - 7167881
Alignment:
Q  234 caaatctgcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||  | |||||||| |||||||||  | ||||||| || |||||||  ||||||||||||||||||||| | ||||||| | |    
T  7167600 caaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccatgattttca-aatcgtgtcacgatttgcgtctgacccaaggtatg 7167698  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||||||||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| |||||||||     
T  7167699 accagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacg 7167797  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||  ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| | ||||||||||||| |||| |||||    
T  7167798 gcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaac 7167881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 233 - 498
Target Start/End: Complemental strand, 27352364 - 27352097
Alignment:
Q  233 tcaaatctgcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaac 330  Q
    ||||||||||||||||||||  | |||| |||||||||||||  ||||||||| |||||||| || ||||||||||||||||||||||||||||||| |     
T  27352364 tcaaatctgcacaagaacacaatatatattagccttcctctgaagcaatcgtgccacgattt-ccaaatcgtgtcacgatttgcgtccgtcccaaggtat 27352266  T
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||| ||||||||||||||||   |||||||||| ||||||||| |||||||||||| ||||     || ||| | |||||||    
T  27352265 gaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga-tttggtgttctgcaaacaagctcac 27352167  T
Q  430 agcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
     |||||  |||||||||||||||| ||||||||||||||| ||||  ||||||||| | |||||||||||    
T  27352166 ggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaattt 27352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 7780074 - 7780208
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaag 101  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  7780074 gagttcttacaaaagagatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttctacccttttcccaatctcacgaag 7780172  T
Q  102 acactcaatgattctctctttacaaggtgtttccca 137  Q
    ||||||||||||| ||||| | ||||||||||||||    
T  7780173 acactcaatgattttctctcttcaaggtgtttccca 7780208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 3 - 502
Target Start/End: Complemental strand, 37408556 - 37408049
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||      
T  37408556 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctcacca 37408459  T
Q  98 -----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
         ||||||||||||| ||| || ||    ||||||||| | ||||||  |||||||||||| ||||||||||||| ||| |||||||||||| | |     
T  37408458 atgaacaagacactcaataattttcactcactaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accataaaccctaaagttgcc 37408361  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacga 289  Q
     ||||||||||||||||| ||||||||||| | ||| | |||| |||||| ||||||||||||| ||||| || ||||  | | |  |||| ||| ||||    
T  37408360 tcctttgatttcccaagtttctctctcttcaagctcac-cttcaaaatcttcacaagaacacttatataccagtcttcagcagataaaatcttgttacga 37408262  T
Q  290 ttttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttc 387  Q
     ||||| ||||||| |||||||  | ||| || ||||||| |||||||  |||||||  | | ||||||| | ||||||| |  |||||||||| ||||     
T  37408261 -tttccaaatcgtgccacgattgatacgtacgacccaaggtacgacca-accttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgattta 37408164  T
Q  388 ccaaatcgtgccacgattttgcacccctacaacctagctcacagcac-ccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttcca 486  Q
    |  ||||||||||||||||  || |||| ||| | ||||||| ||||  | ||||||||||||||| ||| ||||||||||| |||||  ||||||||||    
T  37408163 cacaatcgtgccacgatttgaca-ccctgcaaaccagctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctttgttcttcca 37408065  T
Q  487 taccacaaatttgaag 502  Q
     |||||||||||||||    
T  37408064 aaccacaaatttgaag 37408049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 9636196 - 9636456
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttc--ccaatctcacc 98  Q
    |||||||||||||| | |||||||||| |||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||  |||||||||||    
T  9636196 gagttcttacaaaaag-atacaaaagggttacaagaaattagttttgacaagttcacaaagaacaa-ccctaatttctacccttttctcccaatctcacc 9636293  T
Q  99 aa-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    ||       |||||||||||||| || ||   |||||||||| | || ||| | ||||||||||| |||||||||||||| ||||||||||||||| |||    
T  9636294 aatgaccaagacactcaatgattttcactcaccaaggtgtttacaatatttcccaacccaagagagactctaatcaaaga-ccctaaaccctaaagtttc 9636392  T
Q  191 tccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt 254  Q
    | ||||||||||||||||| ||||||||||||||||| | |||| ||||||||| ||||||||||    
T  9636393 ttcctttgatttcccaagtttctctctcttccaactcactcttcaaaatctgca-aagaacactt 9636456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 28503595 - 28503320
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  ||||||||| |||||||| || | |||||||||||||||||||| | |||||||   ||| |||    
T  28503595 gcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcacgatttgcgtctgacccaaggtt-gacaagt 28503497  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc- 435  Q
    |||||||| ||||||||||||||||||||||   || ||||||| ||||||||| ||||||||||||||| ||   ||  ||| ||||||||| || ||     
T  28503496 ccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggc-gtccagcaaactagctcacggcccct 28503398  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||||||||||||| ||||||||||||||| ||||| |||||||||||  |||||||||||||| |||| |||||    
T  28503397 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaac 28503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 158 - 502
Target Start/End: Original strand, 7782375 - 7782699
Alignment:
Q  158 ctctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta- 256  Q
    ||||||||||||| | ||||| |||| || | |||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||| |     
T  7782375 ctctaatcaaaga-ctctaaaacctagagttactccctttgatttcccaagtttctctctcttccaactgtc-cttcaaatctgcacaagaacacttaaa 7782472  T
Q  257 tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatactt 354  Q
    |||||||| ||| ||| |  |||||||||||||||| ||  |||||||||||||| |  ||| |||||||||| ||||||||||||||||| ||| ||||    
T  7782473 tactagccctccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattggtacgttcgtcccaaggcacgaccagtccttatcatggaaactt 7782571  T
Q  355 aacgagcaagtttcacgatcgtgtcacaatttcccaaatcgtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgata 453  Q
    |||||||||||||                     ||||||||| |||||||| ||| |||| ||| | ||||||| ||| | |||||||||||||||||     
T  7782572 aacgagcaagttt--------------------gcaaatcgtgtcacgatttggca-ccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatg 7782650  T
Q  454 ccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||||||||    
T  7782651 ccaaattcgtgtcacgatttccctgttcttctagaccacaaatttgaag 7782699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 277 - 513
Target Start/End: Complemental strand, 22172899 - 22172663
Alignment:
Q  277 aatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 376  Q
    ||||||| |||||||| || ||||||||||||||||||  | |  ||||||   |||||||||||||||  ||| |||||||||||||||||   |||||    
T  22172899 aatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggaaccaaggtt-gaccagtccttatcagagatccttaacgagcaagtttctgaatcgt 22172801  T
Q  377 gtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttc 474  Q
    ||||| ||||||||| ||||||||||||||| ||  || | ||| || |||||| ||||| ||||||||||||||||| ||||||||||||||| |||||    
T  22172800 gtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 22172702  T
Q  475 cctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     ||||||||||| ||||||||||||||| |||| |||||    
T  22172701 tctgttcttccagaccacaaatttgaagccaatatcaac 22172663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 255 - 513
Target Start/End: Complemental strand, 28501412 - 28501153
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatact 353  Q
    |||||||| |||||||||  ||||||||| |||||||| || | ||||||||| |||||||||| | |||||||   ||| ||||||||||| |||||||    
T  28501412 tatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcatgatttgcgtctgacccaaggtt-gacaagtccttatcagggatact 28501314  T
Q  354 taacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacga 451  Q
    |||||||||||||||   |||||||||| |||| |||| |||||||||||| ||||    ||| ||| ||||||||| || ||  |||||||||||||||    
T  28501313 taacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacga-tttggtgtcctgcaaactagctcacggccccttgaaatcgtgtcacga 28501215  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | ||||||||||||||| ||||| |||||||||||  |||||||||||||| |||| |||||    
T  28501214 tgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaac 28501153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 297 - 469
Target Start/End: Complemental strand, 2671283 - 2671110
Alignment:
Q  297 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcg 395  Q
    |||||||||||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||    
T  2671283 aatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcg 2671184  T
Q  396 tgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcaca 469  Q
    ||||||||||| |||  ||| ||| ||||||||| |||||  |||||| ||||||||| ||||||||||||||||    
T  2671183 tgccacgatttggca-tcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcaca 2671110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 5258224 - 5258440
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------ga 102  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||       ||    
T  5258224 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaatgaacaaga 5258322  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  5258323 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagtttctccctttgatt 5258420  T
Q  202 tcccaagtctctctctcttc 221  Q
    || ||||| |||||||||||    
T  5258421 tctcaagtttctctctcttc 5258440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 8738798 - 8738631
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||| |||||||||  ||||||||| |||||||| ||  ||| ||||||||||||||||||| |||||| | ||||||||    
T  8738798 gcacaagaacacaatatatactagacttcctctgaagcaatcgtgccacgattt-ccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtc 8738700  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattt 406  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||||||| |||||||||||||||    
T  8738699 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 8738631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 9091036 - 9090869
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||| |||||||||  ||||||||| |||||||| ||  ||| ||||||||||||||||||| |||||| | ||||||||    
T  9091036 gcacaagaacacaatatatactagacttcctctgaagcaatcgtgccacgattt-ccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtc 9090938  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattt 406  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||||||| |||||||||||||||    
T  9090937 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 9090869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 45095261 - 45095037
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||       
T  45095261 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttcccaatctcaccaa 45095164  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| |||||||||||||||| | |      
T  45095163 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgcct 45095066  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    | ||||||||||||||| |||||||||||    
T  45095065 cttttgatttcccaagtttctctctcttc 45095037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 5260403 - 5260619
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------ga 102  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||       ||    
T  5260403 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaatgaccaaga 5260501  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | |  |||||||||    
T  5260502 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatt 5260599  T
Q  202 tcccaagtctctctctcttc 221  Q
    |||||||| |||||||||||    
T  5260600 tcccaagtttctctctcttc 5260619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 279 - 502
Target Start/End: Original strand, 1306366 - 1306591
Alignment:
Q  279 tcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 376  Q
    |||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  |||||    
T  1306366 tcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgt 1306464  T
Q  377 gtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttc 474  Q
    ||||| ||||||||| |||||| |||||||| |||||| | ||| | |||||||  |||| ||||||||||||||||| ||||| || |||||| |||||    
T  1306465 gtcacgatttcccaagatcgtgtcacgatttggcaccc-tgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttc 1306563  T
Q  475 cctgttcttccataccacaaatttgaag 502  Q
     ||||||||||| |||| ||||||||||    
T  1306564 tctgttcttccagaccataaatttgaag 1306591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 5236526 - 5236785
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| |||||||||||||||      
T  5236526 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcacca 5236623  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  5236624 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 5236721  T
Q  191 tccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt 254  Q
      |||| |||||||||||| |||||||||| |||  |||||||| ||||||||||||||||||||    
T  5236722 ctccttcgatttcccaagtttctctctctt-caagccccacttcaaaatctgcacaagaacactt 5236785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 18656844 - 18657028
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagct-ca 428  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||| ||  || | ||| || ||| ||    
T  18656844 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcc-tgcaaacttgcttca 18656942  T
Q  429 cagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | ||||| ||||||||||||||||| ||||||||||||||  ||||| |||||||| || ||||||||||||||| |||| |||||    
T  18656943 cggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaac 18657028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 7764562 - 7764340
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | |||||||||| |||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||||||||  ||||||       
T  7764562 gagttcttacaaa-gagatacaaaagagttacaagaaattagctttaacaagttcacaaagaacaa-ccctaatttctacccttttccc--tctcaccaa 7764467  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| | ||||||||||| ||||| ||| |||||| | |      
T  7764466 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcctaacccaagaga-aatctaatcaaag-accctcaactctaaagttacct 7764369  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||||| |||||||||||    
T  7764368 cctttgatttcccaagtttctctctcttc 7764340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 7762363 - 7762140
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc- 98  Q
    ||||||||||||| | |||||||||| |||||||||||||||||| | ||||||||||| |||||| ||||||||||||||| ||||| ||||||||||     
T  7762363 gagttcttacaaa-gagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctaccctttttctcaatctcacca 7762266  T
Q  99 ------aagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
          |||||||||||||||| || ||   |||||||||  | || |||  |||||||||||| ||||||||||||| ||||| |||||||||| | |     
T  7762265 atgaataagacactcaatgattttcactcaccaaggtgttcacaatatttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacc 7762168  T
Q  192 ccctttgatttcccaagtctctctctct 219  Q
     ||||||||||||||||| |||||||||    
T  7762167 tcctttgatttcccaagtttctctctct 7762140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 19683959 - 19684173
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||      
T  19683959 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcacaa 19684056  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||| ||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| |      
T  19684057 atgaacaagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-acccttaaccctaaagttaa 19684154  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  19684155 ctcctttgatttcccaagt 19684173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 40735481 - 40735255
Alignment:
Q  3 gagttcttacaaaagggatacaaaa-ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | ||||||||  |||||||| |||||||||| | |||| |||||| |||||| ||||||||||||||| ||||| |||||||||||    
T  40735481 gagttcttacaaa-gagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttctcaatctcacca 40735384  T
Q  100 a-------gacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    |       |||||||||||||| || |||| | ||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| |||||||||| | |    
T  40735383 atgaacaagacactcaatgattttcacttttccaaggtgtttacaatgtttcctaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttac 40735286  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  40735285 ctcctttgatttcccaagtttctctctcttc 40735255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 39153441 - 39153645
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagac 103  Q
    ||||||||||||| | ||||||||||||||||||  ||||| |||||||||||||| |||||||||||||| |||||||||||||||       ||||||    
T  39153441 aaagggatacaaatgagttacaagaaattagcttaaacaagctcacaatgaacaaa-cctaatttctacccattttcccaatctcacacatgaacaagac 39153539  T
Q  104 actcaatgattctctcttta--caaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||| ||  || |  |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |  ||||||||    
T  39153540 actcaatgattttc-attcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacctcctttgat 39153636  T
Q  201 ttcccaagt 209  Q
    |||||||||    
T  39153637 ttcccaagt 39153645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 502
Target Start/End: Complemental strand, 26928301 - 26928093
Alignment:
Q  297 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-at 393  Q
    |||||||||||||||  | |||  ||| ||||| |||||| |||||||||  | | ||||||||||||||||| |  |||||||||| ||| | ||| ||    
T  26928301 aatcgtgtcacgattgatacgtaagtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagat 26928202  T
Q  394 cgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccac 492  Q
     ||| |||||||| |||||| | ||| | ||||||| |||   | ||||||||||||||| ||||| ||||||||| ||||| ||||||||||| |||||    
T  26928201 tgtgtcacgatttggcaccc-tgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccac 26928103  T
Q  493 aaatttgaag 502  Q
    ||||||||||    
T  26928102 aaatttgaag 26928093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 502
Target Start/End: Original strand, 27453342 - 27453568
Alignment:
Q  277 aatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 374  Q
    ||||||| |||||||| || |||||||||||||||  | ||| |||| ||||| |||||||  |||||||  | | ||||||| ||||||||| |  |||    
T  27453342 aatcgtgccacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatc 27453439  T
Q  375 gtgtcacaatttccca-aatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatt 472  Q
    ||||||| ||| | || |||| || |||||||| |||||| ||||| | ||||||| ||| | | ||||||||||||||| ||||| |||||||||||||    
T  27453440 gtgtcacgattccacacaatcatgtcacgatttggcaccc-tacaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatt 27453538  T
Q  473 tccctgttcttccataccacaaatttgaag 502  Q
    || ||| |||| || |||||||||||||||    
T  27453539 tctctgctctttcagaccacaaatttgaag 27453568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 6718345 - 6718289
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 6718289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 29196456 - 29196555
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || || |||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  29196456 gagttcttacaaa-gagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccctaatttctacccattttcccaatctcacca 29196554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32744504 - 32744721
Alignment:
Q  1 aagagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| ||||||||  |||||||||||| ||||  |||||||||    
T  32744504 aagagttcttacaaa-gtgatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaac--taatttctacccattttttcaatctcac 32744600  T
Q  98 caagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctt 196  Q
     || | ||||||||||| || ||   ||| |||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |  ||||    
T  32744601 aaa-atactcaatgattttcactcaccaatgtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctt 32744697  T
Q  197 tgatttcccaagtctctctctctt 220  Q
    ||||||||||||| | ||||||||    
T  32744698 tgatttcccaagtttttctctctt 32744721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 45282642 - 45282586
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 45282586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 235 - 452
Target Start/End: Original strand, 32143664 - 32143884
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | ||| || ||||  ||| |  |||||||||||||||| || |||||||||||||||  | ||| |||| ||||| |||    
T  32143664 aaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtacg 32143762  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||| |||||||||  | | ||||||||||||||||| |  |||||||||| ||| | ||| |||||| |||||||| ||| |||| ||| |||||||||     
T  32143763 acctgtccttatcttgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggca-ccctgcaaactagctcacg 32143861  T
Q  431 gca-cccgaaatcgtgtcacgat 452  Q
    ||| | | |||||||||||||||    
T  32143862 gcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 8512643 - 8512820
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| ||||||||    
T  8512643 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 8512742  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||  ||   ||||||||||||   |||||||||| ||| ||| | ||||||| ||| ||||| ||||||||| ||||    
T  8512743 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 8512820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 40734596 - 40734370
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| | ||||||||||||||| || | |||| |||||| |||||| ||||||||||||||| |||||||||||||||      
T  40734596 gagttcttacaaa-gggatacaaatgtgttacaagaaattaggttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 40734499  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct-t 189  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  40734498 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttat 40734401  T
Q  190 ctccctttgatttcccaagtctctctctcttc 221  Q
    || |||||||||| |||||| ||| |||||||    
T  40734400 ct-cctttgattttccaagtttctgtctcttc 40734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 760945 - 760731
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||| | |||||||||||||| |||||||||||||||      
T  760945 gagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaga-cctaatttctacccattttcccaatctcacaa 760848  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||  | ||||||||||   ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| |      
T  760847 atgaacaagacactcaatgattttcactcatccaaggtgtttataatgtttcccaacccaagaga-actctaatcaaag-acccttaaccctaaagttaa 760750  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  760749 ctcctttgatttcccaagt 760731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 502
Target Start/End: Complemental strand, 2672603 - 2672431
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||  ||    ||| | |||| |    
T  2672603 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2672504  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
     ||| |    |||||||||||||  |||||||||| ||| ||| | ||||||||||| |||||||||||||||    
T  2672503 ggcatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 2672431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 438 - 502
Target Start/End: Original strand, 37726222 - 37726286
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||||||| |||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  37726222 aaatcgtgtcacgatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 37726286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 8517523 - 8517602
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||    
T  8517523 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgc 8517602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 509
Target Start/End: Original strand, 32475887 - 32476066
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||   |  | ||| | ||||||    
T  32475887 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcac 32475986  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatct 509  Q
     ||  ||   |||||||||||||  | |||||||| ||| ||| | ||||||| ||| ||||||||||||||| ||||||    
T  32475987 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatct 32476066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 509
Target Start/End: Original strand, 32480745 - 32480924
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||   |  | ||| | ||||||    
T  32480745 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcac 32480844  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatct 509  Q
     ||  ||   |||||||||||||  | |||||||| ||| ||| | ||||||| ||| ||||||||||||||| ||||||    
T  32480845 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatct 32480924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 409
Target Start/End: Original strand, 24968419 - 24968599
Alignment:
Q  232 ttcaaatctgcacaagaacacttta--tactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaagga 328  Q
    |||||||  ||||||||||||||||  |||||| ||| | |||  | ||||||| |||||||| || | |||||| ||||||||||  | ||||| |||     
T  24968419 ttcaaataagcacaagaacactttaaatactagtcttgccctgaagaaatcgtgccacgatttccctagatcgtggcacgatttgcaacggtccccaggt 24968518  T
Q  329 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
      |||||||||||||||  || ||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||    
T  24968519 t-gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgc 24968599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 41819592 - 41819691
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||| |||||| ||||||  ||| ||||||||||||||||| ||||||||||||||||    
T  41819592 gagttcttacaaa-gagatacaaaatgggttacaagaaattagcttagacaagctcacaaaaaac-aaccctaatttctacccattttcccaatctcacc 41819689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44700546 - 44700646
Alignment:
Q  1 aagagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||  ||||  |||||| |||| ||||||||||||||||| |||||||||||||||    
T  44700546 aagagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaaactcacaaagaac-aaccctaatttctacccattttcccaatctcac 44700643  T
Q  98 caa 100  Q
    |||    
T  44700644 caa 44700646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22835072 - 22835167
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| |||||||||||||||    
T  22835072 gagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcac 22835167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 502
Target Start/End: Complemental strand, 33386302 - 33386150
Alignment:
Q  351 acttaacgagcaagtttcacgatcgtgtcacaatttcccaaa-tcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtca 448  Q
    ||||||| ||||||||| |  |||||||||| ||| | |||| ||||| |||||||| |||||| | ||| | ||||||| ||| | | |||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgtca 33386204  T
Q  449 cgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||| ||||| ||||||||| ||||| |||||||| |  |||||||||||||||    
T  33386203 cgatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaag 33386150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 4570050 - 4569952
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttgac-aagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| |  ||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4570050 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaataagctcacaatgaacaa-ccctaatttctacccattttcccaatctcacca 4569953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 5433971 - 5434046
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttt--tcccaatctcaccaa 100  Q
    ||||||||||||||||||| | |||| |||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  5433971 ggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctaccattttctcccaatctcaccaa 5434046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 30236223 - 30236129
Alignment:
Q  3 gagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 96  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||||    
T  30236223 gagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctca 30236129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31314545 - 31314447
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    |||||||||||||||| | ||||||| || |||||||||||||||||  ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||    
T  31314545 aagagttcttacaaaaag-atacaaatgggttacaagaaattagcttcaacaagatcacaatgaac-aaccctaatttctacccattttctcaatctcac 31314448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 34491310 - 34491212
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| |||||| ||||||||||||||| |||||||||||||||||    
T  34491310 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 34491213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 9581380 - 9581167
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||| | |||| |||||| ||||||||| |||||||||||| ||||| |||| |||       
T  9581380 gagttcttacaaa-gggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacc-taatttctacccatttccgaatcccacaaa 9581283  T
Q  98 ----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
        ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| |       
T  9581282 tgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-acccttaaccctaaagttaac 9581185  T
Q  192 ccctttgatttcccaagt 209  Q
     |||||||||||||||||    
T  9581184 tcctttgatttcccaagt 9581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 44331642 - 44331545
Alignment:
Q  4 agttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||| | |||||||| || ||||||||||||||||| | |||| ||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  44331642 agttcttacaaa-gagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaa-ccctaatttctacccattttcctaatctcaccaa 44331545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 49199539 - 49199638
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| |||| |||||||||||| ||||||||||||||||    
T  49199539 gagttcttacaaa-gagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacccattttcccaatctcacc 49199636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 43401898 - 43401970
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    ||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  43401898 gttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcaccaa 43401970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 51352197 - 51352278
Alignment:
Q  20 atacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||| ||||||||||||||| ||| | || | |||||||||||||||||||| ||||| | |||||| |||||||||||    
T  51352197 atacaaatggttacaagaaattaactttaaaaagctcacaatgaacaaaccctaacttctatcattttcctaatctcaccaa 51352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 502
Target Start/End: Complemental strand, 2676759 - 2676587
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  ||| |||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||  ||    ||| | |||| |    
T  2676759 gaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2676660  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
      || |    |||||||||||||  |||||||||| ||| ||| | ||||||||||| |||||||||||||||    
T  2676659 gacatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 2676587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 505
Target Start/End: Complemental strand, 40734132 - 40734084
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagaca 505  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagaca 40734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 51398912 - 51398686
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctc---- 95  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||| | |||| ||||||||||||||||| |||| ||||||||        
T  51398912 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttcactaagaac-aaccctaatttctacccatttttccaatctcatca 51398815  T
Q  96 ---accaagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
       | ||||||||||||||||| || ||  | |||||||||| | || |||  |||||||||| | ||||||||||||| || || |||||||||| | |    
T  51398814 atgaacaagacactcaatgattttcactcatccaaggtgtttacaatatttcccaacccaaga-aaactctaatcaaag-actctcaaccctaaagttac 51398717  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| ||| |||||||    
T  51398716 ctcctttgatttcccaagtttctatctcttc 51398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 502
Target Start/End: Complemental strand, 27974493 - 27974446
Alignment:
Q  455 caaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27974446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 36029658 - 36029709
Alignment:
Q  456 aaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  36029658 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 36029709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 16264896 - 16264946
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaat 16264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 21711768 - 21711818
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 29813136 - 29813063
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||||||||||||  |||| |||||||||||||    
T  29813136 ggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacctatttttccaatctcaccaa 29813063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 30709316 - 30709266
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 30709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 32891202 - 32891105
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| ||||||| | |||||||||||| ||||| ||||||||||    
T  32891202 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccattttctcaatctcacc 32891105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 46860547 - 46860474
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  46860547 ggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccattttctcaatctcaccaa 46860474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 502
Target Start/End: Original strand, 27027273 - 27027318
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 29813010 - 29812935
Alignment:
Q  144 caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||||| ||| |||||||||| |||| |||||||||| | |  ||||||||||||||||| |||||||||||    
T  29813010 caacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 29812935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 8738599 - 8738543
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||| |||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 8738543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 9090837 - 9090781
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||| |||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 9090781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 28253363 - 28253423
Alignment:
Q  29 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcc 88  Q
    |||||||||||||| ||| | |||| ||||||||||| |||||||||||||||| ||||||    
T  28253363 gttacaagaaattaacttcaacaagctcacaatgaacgaaccctaatttctaccattttcc 28253423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 53921573 - 53921671
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    |||||||||||||| | ||||||| | |||||||||||||||| || ||||| ||||||  |||||| |||||||||||||| |||| ||||||||||||    
T  53921573 gagttcttacaaaatg-atacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaa-cctaatttctacccatttttccaatctcacca 53921670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 9666562 - 9666632
Alignment:
Q  29 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    |||||||||||||||||| | |||| |||||| |||||||  ||||||||||||| |||| ||||||||||    
T  9666562 gttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttccaatctcac 9666632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 27986017 - 27985971
Alignment:
Q  455 caaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 39032075 - 39032025
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| || |||||||||||| ||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 25517069 - 25517121
Alignment:
Q  27 aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 80  Q
    |||||| ||||||||||||| | ||| |||||| ||||||||||||||||||||    
T  25517069 aggttataagaaattagcttaa-aagctcacaaagaacaaaccctaatttctac 25517121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 43403841 - 43403913
Alignment:
Q  29 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||| ||||| | |||| |||||| |||||| || |||||||||||| ||||||||||||||||||    
T  43403841 gttacaagaaatgagcttcaacaagctcacaaagaacaagcc-taatttctacccattttcccaatctcaccaa 43403913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4386926 - 4386875
Alignment:
Q  28 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 80  Q
    ||||||||||||||||||| | ||| |||||| ||||||| ||||||||||||    
T  4386926 ggttacaagaaattagcttaa-aagctcacaaagaacaaaacctaatttctac 4386875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 6095669 - 6095767
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgac-aagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||| ||| |  ||||| |||| |||||| ||||||||||||| | |||||||||||||||||    
T  6095669 gagttcttacaaa-gagatacaaatgggttacaagaaattaacttcaagaagtttacaaagaacaa-ccctaatttctactcattttcccaatctcacca 6095766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 29810966 - 29810868
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||| |||||||||||   |||||| ||||||||||    
T  29810966 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aactctaatttctacatattttcctaatctcacca 29810869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 505
Target Start/End: Complemental strand, 40735063 - 40735015
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagaca 505  Q
    |||||||||||| ||||  |||||| |||| ||||||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaagaca 40735015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 54593802 - 54593704
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||| |||||||||| | |||| |||||| |||||| ||||||||||| | | |||||||||||||||||    
T  54593802 gagttcttacaaa-gagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaa-ccctaatttctgcacattttcccaatctcacca 54593705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 389; Significance: 0; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 513
Target Start/End: Complemental strand, 3439603 - 3439089
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3439603 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgccaagttcataatgaacaaaccctaatttctacccttttcccaatctcaccaa 3439504  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  3439503 gacactcaatgattttctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgat 3439404  T
Q  201 ttcccaagtctctct--ctcttccaactcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    ||| |||||||||||  |||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  3439403 ttctcaagtctctctctctcttccaactctctcttcaaatctgcacaagaacactttatactagtcttcctctgttgaaatcgtgtcacgattttcccaa 3439304  T
Q  299 tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaatcgtgc 398  Q
    ||||| |||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  3439303 tcgtgccacgatatgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgt 3439204  T
Q  399 cacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatt 497  Q
    |||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  3439203 cacgattttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatt 3439105  T
Q  498 tgaagacaatctcaac 513  Q
    ||||||||||||||||    
T  3439104 tgaagacaatctcaac 3439089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Complemental strand, 25690054 - 25689604
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25690054 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacctttttcccaatctcaccaa 25689955  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25689954 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgat 25689855  T
Q  201 ttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaat 299  Q
    |||||||||||||  ||||||||||  |  |||||||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  25689854 ttcccaagtctct--ctcttccaacctcttcttcaaagatgcacaagaacacttaaatactagccttcctctgttgcaatcgtgtcacgattttctcaat 25689757  T
Q  300 cgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgc 398  Q
    |||||||||||||| || |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  25689756 cgtgtcacgatttgtgtacaaaccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgc 25689657  T
Q  399 cacgattttgcacccctacaacctagctcacagcacccgaaatcgtgtcacgat 452  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  25689656 cacgattttgca-ccctgcaacctagctcacggcacccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 42575402 - 42575908
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  42575402 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaatccctaatttctacccctttcccaatctcaccaagacactc 42575501  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  42575502 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaa 42575598  T
Q  208 gtctctctctcttccaactcc---cacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtg 303  Q
    ||||||||||  |||||||||   | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  42575599 gtctctctct--tccaactcctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtg 42575696  T
Q  304 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccac 401  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||    
T  42575697 tcacgatttgcgtccgtcccaaggaaagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacac 42575796  T
Q  402 gattttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttga 500  Q
    || ||||||||||| ||| |||| ||||| ||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  42575797 ga-tttgcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 42575895  T
Q  501 agacaatctcaac 513  Q
    |||||||||||||    
T  42575896 agacaatctcaac 42575908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 15290614 - 15290144
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15290614 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 15290515  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  15290514 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaa 15290418  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    ||||||||               |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||                       
T  15290417 gtctctct---------------cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcac------------------- 15290352  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  15290351 -gatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 15290254  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||||||| | || ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  15290253 tttgcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 15290154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 15470983 - 15470513
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15470983 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 15470884  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  15470883 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaa 15470787  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    ||||||||               |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||                       
T  15470786 gtctctct---------------cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcac------------------- 15470721  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  15470720 -gatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 15470623  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||||||| | || ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  15470622 tttgcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 15470523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 3 - 502
Target Start/End: Complemental strand, 2627834 - 2627331
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||| ||| ||||||||| |  || ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2627834 gagttcttacacaagagatacaaaaagagttgcaagaaattagatttgacaagttcacaatgaacaa-ccctaatttctacccttttcccaatctcacca 2627736  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttg 198  Q
    ||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||| || | |||||||||    
T  2627735 agacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actctaaaccctagagttactccctttg 2627637  T
Q  199 atttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||  ||||||||| |||   | |  ||||||||||||| ||| |      
T  2627636 atttcccaagtttctctctcttccaactctc-cttcaaatctgcacaagaacacttaaatactagccctccaacgataaaatcgtgtcacga-tttacag 2627539  T
Q  298 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc-aaatc 394  Q
    |||||||||| | |  ||||| |||| |||| |||||||| ||||||||| ||| |||||||||||||||||    |||||||||| ||||||| |||||    
T  2627538 atcgtgtcacaaatggtgcgtacgtcacaagaaacgaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatc 2627439  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| ||| || | ||| | ||||||| | | | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  2627438 gtgtcacgatttggca-ccatgcaaaccagctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 2627340  T
Q  494 aatttgaag 502  Q
    |||||||||    
T  2627339 aatttgaag 2627331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 4759809 - 4759535
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||| |||||||||  | |||||||||||||||| ||  ||||||||||||||||||||||| |||||| | ||||||||    
T  4759809 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtgtcacgatttgcgtccgttccaaggtatgaccagtc 4759711  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-c 436  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| ||||| |    
T  4759710 cttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcacctc 4759612  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||||||||||||||  |||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  4759611 gaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 4759535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 255 - 513
Target Start/End: Original strand, 30656023 - 30656281
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactt 354  Q
    |||||||| |||||||||  ||||||||| |||||||| ||  |||||||||||||||||||| | |||||||   ||||||||||||||||||||||||    
T  30656023 tatactagtcttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatactt 30656121  T
Q  355 aacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgat 452  Q
    ||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| |||||  ||||||||||||||||    
T  30656122 aacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 30656220  T
Q  453 accaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  30656221 gccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 30656281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 242 - 513
Target Start/End: Original strand, 36979741 - 36980013
Alignment:
Q  242 cacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtcct 340  Q
    ||||||||||||| | ||||||||||||||||  ||||||||| |||||||| ||  ||||||||||||||||||| |  ||||||| | ||||||||||    
T  36979741 cacaagaacacttaaatactagccttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtcct 36979839  T
Q  341 tatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cga 438  Q
    |||||  |||||||||||||||||||||   |||||||||| |||| |||| ||||||||||||||| ||  || | ||| ||||||||| ||||| |||    
T  36979840 tatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcc-tgcaaactagctcacggcacctcga 36979938  T
Q  439 aatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  36979939 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 36980013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 18852902 - 18852628
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||| |||||||||  ||||||||| |||||||| || |||||||||||||| |||||| | ||||||| | ||||||||    
T  18852902 gcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt-ccaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtc 18852804  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-c 436  Q
    |||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| |||||      
T  18852803 cttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcacctt 18852705  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| |||||||||| |||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  18852704 gaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 18852628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 241 - 501
Target Start/End: Complemental strand, 1261692 - 1261428
Alignment:
Q  241 gcacaagaacacttta--tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccag 336  Q
    ||||||||||||||||  |||||||||||||||| |  |||||||||||||||| ||  ||||||||||||||||  |||  ||||||||| | ||||||    
T  1261692 gcacaagaacactttaaatactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtatgtcccaaggtatgaccag 1261594  T
Q  337 tccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagca-c 434  Q
    ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||| |||||| |||||||| ||| |||| ||| ||||||||| ||| |    
T  1261593 tccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggca-ccctgcaaactagctcacggcatc 1261495  T
Q  435 ccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
     ||||||||||||||||| ||||| ||||||| | |||||  |||||||||| ||||||||||||||    
T  1261494 acgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaa 1261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 296 - 513
Target Start/End: Complemental strand, 33037506 - 33037288
Alignment:
Q  296 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atc 394  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| |||||||||||   |||||||||| ||||||||| |||    
T  33037506 caatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 33037407  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| ||   ||| ||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  33037406 gtgtcacgatttggc-gtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccaca 33037308  T
Q  494 aatttgaagacaatctcaac 513  Q
    ||||||||| |||| |||||    
T  33037307 aatttgaagccaatatcaac 33037288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 18870296 - 18870022
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||| ||| |||||  ||||||||| ||||||||||  |||||||||||||| |||||| | ||||||| | ||||||||    
T  18870296 gcacaagaacacaatatatactagtctttctctgaagcaatcgtgccacgattttca-aatcgtgtcacgatctgcgtctgacccaaggtatgaccagtc 18870198  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagca-ccc 436  Q
    ||||| |  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| |||||||||  || |      
T  18870197 cttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacgacatctt 18870099  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  18870098 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 18870022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 241 - 507
Target Start/End: Original strand, 6311659 - 6311928
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcc-caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  | ||| ||| |||||||| || ||||||||||||||||||| || | |||||||   ||| |||    
T  6311659 gcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggtt-gacaagt 6311757  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc 436  Q
    |||||| |  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| ||||||||| |||||     
T  6311758 ccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactagctcacggcacct 6311856  T
Q  437 -gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     |||||||||||||||| ||||||||||||||  ||||| ||||||||||| ||||||||||||||| ||||    
T  6311857 tgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaat 6311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 7289704 - 7289428
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| || | ||||||||||||||||| || |  |||||| | ||| |||    
T  7289704 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgatccaaggta-gacaagt 7289606  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc 436  Q
    |||||||| ||||||||||||||||||||||   |||||||||| |||| |||| |||||| |||||||| ||  || | ||| ||||||||  || |||    
T  7289605 ccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcc-tgcaaactagctcatggctccc 7289507  T
Q  437 --gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
      |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  7289506 ttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaatatcaac 7289428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 331 - 513
Target Start/End: Complemental strand, 10683923 - 10683740
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| |||||||||    
T  10683923 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactagctcac 10683825  T
Q  430 agcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||  |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  10683824 ggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 10683740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 34254402 - 34254624
Alignment:
Q  4 agttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac---- 97  Q
    |||||||||||| | ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||        
T  34254402 agttcttacaaa-gagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttctacccttttcccaatctcaccaat 34254499  T
Q  98 ---caagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccc 194  Q
       ||||||||||||||||| || ||   |||||||||| | |||| | |||||||||||| ||||||||||||| |||||||||||||||| | |  ||    
T  34254500 gaacaagacactcaatgattttcactcaccaaggtgtttacaatgtctccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgcctcc 34254597  T
Q  195 tttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||| |||||||||||    
T  34254598 tttgatttcccaagtttctctctcttc 34254624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 26288234 - 26288504
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||||||||| ||| |  |||||||||||||||| ||   ||||| ||| ||| |  ||| |||| ||||| |||    
T  26288234 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccaggtcgtgacactattggaacgtacgtcacaaggtacg 26288332  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||| ||| ||||||||||||||||| |  || ||||||| ||||||||| || ||| |||||||| |||||| | ||| | |||||||     
T  26288333 accagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccc-tgcaaaccagctcacg 26288431  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||| ||||||||| ||||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  26288432 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 26301491 - 26301761
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||||||||| ||| |  |||||||||||||||| ||   ||||| ||| ||| |  ||| |||| ||||| |||    
T  26301491 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccaggtcgtgacactattggaacgtacgtcacaaggtacg 26301589  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||| ||| ||||||||||||||||| |  || ||||||| ||||||||| || ||| |||||||| |||||| | ||| | |||||||     
T  26301590 accagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccc-tgcaaaccagctcacg 26301688  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||| ||||||||| ||||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  26301689 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 26313485 - 26313755
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||||||||| ||| |  |||||||||||||||| ||   ||||| ||| ||| |  ||| |||| ||||| |||    
T  26313485 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccaggtcgtgacactattggaacgtacgtcacaaggtacg 26313583  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||| ||| ||||||||||||||||| |  || ||||||| ||||||||| || ||| |||||||| |||||| | ||| | |||||||     
T  26313584 accagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccc-tgcaaaccagctcacg 26313682  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||| ||||||||| ||||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  26313683 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 39784601 - 39784326
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| ||||| |||  | ||||||| |||||||| || | ||||||||||||| |||  | ||||| |||   |||||||    
T  39784601 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 39784503  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc 436  Q
    ||||||||  |||||||||| | ||||||||   |||||||||| ||||||||| ||||||||||||||||||| ||    ||| | |||||| |||||     
T  39784502 ccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacct 39784403  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
      |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  39784402 ccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaac 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 17982741 - 17982525
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------ga 102  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||       ||    
T  17982741 aaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaatgaacaaga 17982643  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || |||||||||    
T  17982642 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatt 17982545  T
Q  202 tcccaagtctctctctcttc 221  Q
    |||||||| |||||||||||    
T  17982544 tcccaagtttctctctcttc 17982525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 31218345 - 31218129
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------ga 102  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| ||||  ||||||||||||||       ||    
T  31218345 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttttcccaatctcaccaatgaacaaga 31218247  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || |||||||||    
T  31218246 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatt 31218149  T
Q  202 tcccaagtctctctctcttc 221  Q
    |||||||| |||||||||||    
T  31218148 tcccaagtttctctctcttc 31218129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 335 - 513
Target Start/End: Complemental strand, 25327844 - 25327665
Alignment:
Q  335 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc- 432  Q
    |||||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||| ||||| ||  || | ||| ||||||||||||     
T  25327844 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcc-tgcaaactagctcacagcc 25327746  T
Q  433 acccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||  ||||||||| |||||  ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  25327745 acttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 25327665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 44303953 - 44303726
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt---cccaatctcac 97  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||||   |||||||||||    
T  44303953 gagttctta-aaaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaa-ccttaatttctaccctttttttcccaatctcac 44303856  T
Q  98 caa-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagctt 189  Q
    |||       |||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| |     
T  44303855 caatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttg 44303758  T
Q  190 ctccctttgatttcccaagtctctctctcttc 221  Q
     | ||||||||||| ||||| |||||||||||    
T  44303757 tttcctttgatttctcaagtttctctctcttc 44303726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 34256577 - 34256788
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| |||||||||||||| |||| ||||||||||       
T  34256577 gagttcttacaaa-gagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttctaccatttttccaatctcaccaa 34256674  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctcc 193  Q
        ||||||||||||||||| || |    |||||||||| | |||||| |||||||||| | ||||||||||||| |||||||||||||||| | |  |    
T  34256675 tgaacaagacactcaatgattttcacacaccaaggtgtttacaatgtttccaacccaagata-actctaatcaaag-accctaaaccctaaagttgcctc 34256772  T
Q  194 ctttgatttcccaagt 209  Q
    ||||||||||||||||    
T  34256773 ctttgatttcccaagt 34256788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 1746298 - 1746516
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcc--caatctcaccaa-------ga 102  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| ||||    ||||||||||||       ||    
T  1746298 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacctttttttttcaatctcaccaatgaacaaga 1746396  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | |||| |||||| ||||||||||| || ||||||||||||||| | || |||||||||    
T  1746397 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaaccaaagaga-actctaatcaagga-ccctaaaccctaaagttgcttcctttgatt 1746494  T
Q  202 tcccaagtctctctctcttcca 223  Q
    |||||||| |||||||||||||    
T  1746495 tcccaagtttctctctcttcca 1746516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 19945439 - 19945656
Alignment:
Q  14 aaagggatacaaaag--gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caag 101  Q
    |||| ||||||||||  |||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||  |||||||||||||||       ||||    
T  19945439 aaagagatacaaaagtggttacaagaaattagctttgacaagttcacaaagaac-aaccataatttctacccttttttcccaatctcaccaatgaacaag 19945537  T
Q  102 acactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| || ||||||||||||| | || ||||||||    
T  19945538 acactcaatgattttcactcaccaaggtgtttacaatgtttcccgacccaagaga-actctaatcaaag-actctaaaccctaaagttgcttcctttgat 19945635  T
Q  201 ttcccaagtctctctctcttc 221  Q
    ||||||||| | |||||||||    
T  19945636 ttcccaagtttgtctctcttc 19945656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 232 - 452
Target Start/End: Complemental strand, 10688884 - 10688661
Alignment:
Q  232 ttcaaatctgcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcc-caatcgtgtcacgatttgcgtccgtcccaagga 328  Q
    |||||| ||||||||||||||  | |||||||| |||||||||  | ||| ||| |||||||| || ||||||||||||||||||| || | |||||||     
T  10688884 ttcaaaactgcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggt 10688785  T
Q  329 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctc 427  Q
      ||| ||||||||| |  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| |||||||    
T  10688784 t-gacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctc 10688687  T
Q  428 acagcacc-cgaaatcgtgtcacgat 452  Q
    || |||||  ||||||||||||||||    
T  10688686 acggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 42498292 - 42498066
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc--cttttcccaatctcac- 97  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||  |||||||||||| |||| ||||||||||||||||   |||||||||||||||     
T  42498292 gagttcttacaaa-gaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacctttttttcccaatctcacc 42498195  T
Q  98 ------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
          ||||||||||||||||| || ||   |||||||||| | | ||||  |||||||||||| ||| ||||||||| ||||| |||||||||| | |    
T  42498194 aatgaacaagacactcaatgattttcactcaccaaggtgtttacaacgtttcccaacccaagaga-actttaatcaaag-accctcaaccctaaagttac 42498097  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  42498096 ctcctttgatttcccaagtttctctctcttc 42498066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 30 - 254
Target Start/End: Complemental strand, 43036494 - 43036263
Alignment:
Q  30 ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa-------gacactcaatgattctctct 120  Q
    |||||||||||||| || | ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||       |||||||||||||| || ||    
T  43036494 ttacaagaaattagtttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcact 43036396  T
Q  121 ttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctc 218  Q
       | ||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |  ||||||||||||||||| ||||||||    
T  43036395 cacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 43036298  T
Q  219 ttccaactcccacttcaaatctgcacaagaacactt 254  Q
    ||| | ||| || |  ||||||||| ||||||||||    
T  43036297 ttcaacctctcattcaaaatctgca-aagaacactt 43036263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 15212884 - 15212658
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| |||||||||||||||      
T  15212884 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcacca 15212787  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||| ||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  15212786 atgaacaagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 15212689  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      | ||||||||||||||| |||||||||||    
T  15212688 ctcatttgatttcccaagtttctctctcttc 15212658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 12702704 - 12702934
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc------ttttcccaatct 94  Q
    ||||||||||||| | || |||||||| ||||||||||||||||| | ||||||||||| |||||| |||||||||||||||      ||||||||||||    
T  12702704 gagttcttacaaa-gagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacccttttttttttcccaatct 12702801  T
Q  95 cac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaag 186  Q
    |||       ||||||||| ||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||     
T  12702802 caccaatgaacaagacacttaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaat 12702899  T
Q  187 cttctccctttgatttcccaagtctctctctcttc 221  Q
     | |  ||||||||||||||||| |||||||||||    
T  12702900 ttacctcctttgatttcccaagtttctctctcttc 12702934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 391 - 518
Target Start/End: Complemental strand, 31043032 - 31042904
Alignment:
Q  391 aatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccatac 489  Q
    ||||||| |||||||| |||||| | ||| | ||||||| ||||| ||||||||||||||||| ||||| ||||||||| ||||| || |||||||| ||    
T  31043032 aatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagac 31042934  T
Q  490 cacaaatttgaagac-aatctcaactgatg 518  Q
    ||||||||||||| | ||||||||| ||||    
T  31042933 cacaaatttgaagtcaaatctcaacagatg 31042904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 27811351 - 27811148
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||||||||||||       ||||||||||||||||| ||     
T  27811351 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttca 27811253  T
Q  119 ct-ttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||    |||||||||| | ||||||| ||||| |||||| ||||||||||||| ||||| |||||||||  | |  ||||||||||||||| | ||||||    
T  27811252 ctcacccaaggtgtttacaatgttttccaacctaagaga-actctaatcaaag-accctcaaccctaaatttacctcctttgatttcccaattttctctc 27811155  T
Q  217 tcttcca 223  Q
    |||||||    
T  27811154 tcttcca 27811148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 439 - 502
Target Start/End: Original strand, 7412876 - 7412939
Alignment:
Q  439 aatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  7412876 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 7412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 33352248 - 33352020
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||| || | ||||||||||| |||||| ||||||||| ||||| |||||||||||||||||    
T  33352248 gagttcttacaaa-gagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaa-ccctaatttttacccattttcccaatctcacca 33352151  T
Q  100 a-------gacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    |       |||||||||||||| ||  |   | ||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |    
T  33352150 atgaacaagacactcaatgattttcaatcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttac 33352053  T
Q  191 tccctttgatttcccaagtctctctctcttcca 223  Q
       |||||||||||||||| |||||||||||||    
T  33352052 cttctttgatttcccaagtttctctctcttcca 33352020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 35745794 - 35745971
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| | ||||||    
T  35745794 gaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcac 35745893  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |    |||||||||||||  | |||||| | ||| ||| | ||||||||||| ||||||||||||||| ||||    
T  35745894 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 35745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 25689618 - 25689562
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaac 25689562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 44353891 - 44353796
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||||| |||| ||||||||||||||||| |||||||||||||||    
T  44353891 gagttcttacaaa-gagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcac 44353796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 4731756 - 4731530
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| || ||| ||||||||||||||| |||||||||||||||      
T  4731756 gagttcttacaaa-gagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagcaa-ccctaatttctacccattttcccaatctcacca 4731659  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  4731658 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 4731561  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||  ||||| |||||||||||    
T  4731560 ctcctttgatttttcaagtttctctctcttc 4731530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 9765843 - 9765745
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  9765843 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgccaagctcacaaagaac-aaccctaatttctacccattttcccaatctcacca 9765746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 30291707 - 30291606
Alignment:
Q  1 aagagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    |||| |||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  30291707 aagaattcttacaaa-gtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctcac 30291609  T
Q  98 caa 100  Q
    |||    
T  30291608 caa 30291606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 209
Target Start/End: Complemental strand, 10929871 - 10929685
Alignment:
Q  29 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttccca-atctcaccaa-------gacactcaatgattctctc 119  Q
    |||||||||||||||||| | |||| |||||| ||||||||  |||||||||||| ||| ||| ||||||||||       |||||||||||||| || |    
T  10929871 gttacaagaaattagcttcaacaagctcacaaagaacaaaca-taatttctacccattttccatatctcaccaaagaacaagacactcaatgattttcac 10929773  T
Q  120 tt-tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagt 209  Q
    |  | |||||||||| | |||||  |||||||||||| |||||||||||||| |||  |||||||||| | |  |||||||||||||||||    
T  10929772 taatccaaggtgtttacaatgttcccaacccaagaga-actctaatcaaagacccc--aaccctaaagttacctcctttgatttcccaagt 10929685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 30143289 - 30143214
Alignment:
Q  144 caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||||| |||||||||||||| |||| |||||||||| | |  ||||||||||||||||| |||||||||||    
T  30143289 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 30143214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 4283622 - 4283524
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||  ||| ||||||||||||||||| |||||||||||||||||    
T  4283622 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttctacccattttcccaatctcacca 4283525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 10688675 - 10688619
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 10688619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 19491769 - 19491867
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| ||||||||| |||||||||||| |||||||||||||||||    
T  19491769 gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacc-taatttctacccattttcccaatctcacca 19491866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 19948554 - 19948617
Alignment:
Q  157 actctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||||||| | ||||||||||||| | || ||||||||||||||||| |||||||||||    
T  19948554 actctaatcaaaga-ctctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 19948617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 40321153 - 40321082
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||||| ||| | |||| ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  40321153 ggttacaagaaattaacttcaacaagctcacaatgaacaa-ccctaatttctacccattttcccaatctcacc 40321082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 42435061 - 42435159
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  42435061 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttccaatctcacca 42435158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 8965820 - 8965859
Alignment:
Q  61 gaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  8965820 gaacaaaccctaatttctacctttttcccaatctcaccaa 8965859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18141920 - 18141821
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||  |||||||||||||| ||||| |||||||||    
T  18141920 aagagttcttacaaa-gtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa--cctaatttctacccattttcacaatctcac 18141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 5702009 - 5701959
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 30143438 - 30143346
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatct 94  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  30143438 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatct 30143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 31043125 - 31043017
Alignment:
Q  279 tcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 376  Q
    |||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  |||||    
T  31043125 tcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgt 31043027  T
Q  377 gtcacaattt 386  Q
    ||||| ||||    
T  31043026 gtcacgattt 31043017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 6599070 - 6598856
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    |||||||||||||||  ||||||| || |||||||||||||||||  ||||| || ||| ||||||| | |||||||||||| |||||||||||||||      
T  6599070 gagttcttacaaaagt-atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccattttcccaatctcacaa 6598973  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct-t 189  Q
         ||||||||| ||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  6598972 atgaacaagacacttaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttat 6598875  T
Q  190 ctccctttgatttcccaagt 209  Q
    || |||||||||||||||||    
T  6598874 ct-cctttgatttcccaagt 6598856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 6674523 - 6674309
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    |||||||||||||||  ||||||| || |||||||||||||||||  ||||| || ||| ||||||| | |||||||||||| |||||||||||||||      
T  6674523 gagttcttacaaaagt-atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccattttcccaatctcacaa 6674426  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct-t 189  Q
         ||||||||| ||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  6674425 atgaacaagacacttaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttat 6674328  T
Q  190 ctccctttgatttcccaagt 209  Q
    || |||||||||||||||||    
T  6674327 ct-cctttgatttcccaagt 6674309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 1292533 - 1292631
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| ||||||| | |||||||||||| ||||| |||||||||||    
T  1292533 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cttaatttctacccattttctcaatctcacca 1292630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 1822365 - 1822297
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    |||||||||||||||||||  ||||| |||||| ||||||||| ||||||||| ||||||  |||||||    
T  1822365 ggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctc 1822297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 1856810 - 1856742
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    |||||||||||||||||||  ||||| |||||| ||||||||| ||||||||| ||||||  |||||||    
T  1856810 ggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctc 1856742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 3303740 - 3303838
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | ||||||||||||||| || | |||| |||||| ||||||||  |||||||||||| |||||||||||||||||    
T  3303740 gagttcttacaaa-gagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaact-taatttctacccattttcccaatctcacca 3303837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 219
Target Start/End: Complemental strand, 4733777 - 4733683
Alignment:
Q  124 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctct 219  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |  | ||||||||||||||| |||||||||    
T  4733777 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcttttgatttcccaagtttctctctct 4733683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 18655498 - 18655400
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| |||| |||||||||||| ||||| |||||||||||    
T  18655498 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacccattttctcaatctcacca 18655401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 40221843 - 40221745
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| |||||| ||||||||||||||| |||| ||||||||||||    
T  40221843 gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa-ccctaatttctacccattttaccaatctcacca 40221746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 31043189 - 31043112
Alignment:
Q  235 aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgattt 312  Q
    ||||||||||||||||||||  ||||||| ||||| ||| |  ||||||||||||| ||||| | ||||||||||||||    
T  31043189 aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacga-tttccaagtcgtgtcacgattt 31043112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 502
Target Start/End: Original strand, 4456575 - 4456620
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||| |||||  |||||||||| |||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaag 4456620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 41364927 - 41365011
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctca 96  Q
    ||||||||||||| | ||||||||||||||||||  ||||  |||||| ||||||| |||||||||||||  ||||||||||||||    
T  41364927 aaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaacaaa-cctaatttctaccaattttcccaatctca 41365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 6813771 - 6813818
Alignment:
Q  28 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaattt 76  Q
    |||||||||||||||||||| |||| |||||| ||||||| ||||||||    
T  6813771 ggttacaagaaattagcttg-caagctcacaaagaacaaaacctaattt 6813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 10240227 - 10240159
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    |||||||||||||||| ||  ||||| |||||| |||||||||| |||||||| | || ||||||||||    
T  10240227 ggttacaagaaattagattcaacaagctcacaaagaacaaacccaaatttctatctttgtcccaatctc 10240159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 29796413 - 29796485
Alignment:
Q  24 aaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    |||| |||||||||||| ||||| | ||||||| | | ||||||||| | |||||||| ||||||||||||||    
T  29796413 aaaatgttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctc 29796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 41366684 - 41366778
Alignment:
Q  3 gagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 96  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||  ||||| | |||| ||||||| | |||||||||||| ||||| ||||||||    
T  41366684 gagttcttacaaa-gggatacaaataggttaaaagaaattagcttaaacaagcttacaaagaacaaa-cataatttctacccattttctcaatctca 41366778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 382; Significance: 0; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Original strand, 16578589 - 16579100
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16578589 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgagcaaaccctaatttctacccttttcccaatctcaccaaga 16578688  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||     
T  16578689 cactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagag-ttgcccctttgattc 16578787  T
Q  203 cccaagtctctctctcttccaactcc-cacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcg 301  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| || |||||    
T  16578788 cccaagtctctctcacttccaactcctctcttcaaatctgcacaagaacaatttatactacccttcctctgttgaaatcgtgtcacgatttcccaaatcg 16578887  T
Q  302 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcca 400  Q
    ||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16578888 tgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgcca 16578987  T
Q  401 cgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttg 499  Q
    |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16578988 cgattttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttg 16579086  T
Q  500 aagacaatctcaac 513  Q
    ||||||||||||||    
T  16579087 aagacaatctcaac 16579100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 16616791 - 16616280
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16616791 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgagcaaaccctaatttctacccttttcccaatctcaccaaga 16616692  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||     
T  16616691 cactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagag-ttgcccctttgattc 16616593  T
Q  203 cccaagtctctctctcttccaactcc-cacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcg 301  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| || |||||    
T  16616592 cccaagtctctctcacttccaactcctctcttcaaatctgcacaagaacaatttatactacccttcctctgttgaaatcgtgtcacgatttcccaaatcg 16616493  T
Q  302 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcca 400  Q
    ||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16616492 tgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgcca 16616393  T
Q  401 cgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttg 499  Q
    |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16616392 cgattttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttg 16616294  T
Q  500 aagacaatctcaac 513  Q
    ||||||||||||||    
T  16616293 aagacaatctcaac 16616280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 16554966 - 16554455
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16554966 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 16554867  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||     
T  16554866 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagag-ttgcccctttgattc 16554768  T
Q  203 cccaagtctctctctcttccaactc-ccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcg 301  Q
    |||||||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||    
T  16554767 cccaagtctctctcacttccaactcttctcttcaaatctgcacaagaacaatttatactagccttcctctgttgaaatcgtgtcacgatttcccaaatcg 16554668  T
Q  302 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcca 400  Q
    ||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16554667 tgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgcca 16554568  T
Q  401 cgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttg 499  Q
    | |||||||| ||||  |||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  16554567 caattttgca-ccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttg 16554469  T
Q  500 aagacaatctcaac 513  Q
    ||||||||||||||    
T  16554468 aagacaatctcaac 16554455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 16631522 - 16631011
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631522 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 16631423  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||     
T  16631422 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagag-ttgcccctttgattc 16631324  T
Q  203 cccaagtctctctctcttccaactc-ccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcg 301  Q
    |||||||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||    
T  16631323 cccaagtctctctcacttccaactcttctcttcaaatctgcacaagaacaatttatactagccttcctctgttgaaatcgtgtcacgatttcccaaatcg 16631224  T
Q  302 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcca 400  Q
    ||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16631223 tgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgcca 16631124  T
Q  401 cgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttg 499  Q
    | |||||||| ||||  |||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  16631123 caattttgca-ccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttg 16631025  T
Q  500 aagacaatctcaac 513  Q
    ||||||||||||||    
T  16631024 aagacaatctcaac 16631011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 6027337 - 6026835
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6027337 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 6027238  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6027237 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 6027141  T
Q  209 tctctctctcttccaac-tcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||  |||||| || | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6027140 tctctctct--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 6027043  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgatt 405  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||||| |    
T  6027042 cgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-t 6026944  T
Q  406 ttgcacccctacaa-cctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    |||||||||| ||| |||||||| | ||||| |||||||||||||| || ||  ||||||||||| |||||||| |||||||| ||||||||||||||||    
T  6026943 ttgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaaga 6026845  T
Q  504 caatctcaac 513  Q
    ||||||||||    
T  6026844 caatctcaac 6026835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 33342183 - 33342687
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    ||||||||||  ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33342183 ttacaaaaggagtacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 33342282  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  33342283 aatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaa 33342379  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| | | || || | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  33342380 gtctctctct-tccaaattctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 33342478  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc--aaatcgtgccacgat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||  ||||||||||||||     
T  33342479 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacga- 33342577  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||||||||| ||| ||||||||| ||| |||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  33342578 tttgcacccctgcaaccctagctcacggcatccgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaaga 33342677  T
Q  504 caatctcaac 513  Q
    ||||||||||    
T  33342678 caatctcaac 33342687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 3 - 452
Target Start/End: Complemental strand, 16653209 - 16652759
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16653209 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttttacccttttcccaatctcaccaaga 16653110  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||     
T  16653109 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagag-ttgcccctttgattc 16653011  T
Q  203 cccaagtctctctctcttccaactc-ccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcg 301  Q
     ||||||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||    
T  16653010 tccaagtctctctcacttccaactcttctcttcaaatctgcacaagaacaatttatactagccttcctctgttgaaatcgtgtcacgatttcccaaatcg 16652911  T
Q  302 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcca 400  Q
    ||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||    
T  16652910 tgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttcca 16652811  T
Q  401 cgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgat 452  Q
    ||| |||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  16652810 cgactttgca-ccctacaacctagctcacggcaccccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 34167170 - 34166667
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34167170 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 34167071  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  34167070 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 34166974  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  34166973 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtca 34166876  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  34166875 cgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga- 34166777  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  34166776 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaaga 34166677  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  34166676 caaactcaac 34166667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 506
Target Start/End: Complemental strand, 27647960 - 27647476
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647960 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 27647861  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  27647860 gacactcaatgattctctct--acatggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgat 27647763  T
Q  201 ttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||                        
T  27647762 ttcccaagtctctctctcttccaactctctcttcaaatctgcacaagaacactttatactagtcttcctctattgcaatc-------------------- 27647683  T
Q  301 gtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgcc 399  Q
    |||||||||| ||||| |  |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  27647682 gtgtcacgatctgcgtaccacccaagaaacgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgcc 27647583  T
Q  400 acgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
    ||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||    
T  27647582 acgattttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaattt 27647484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 34164948 - 34164445
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34164948 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 34164849  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  34164848 aatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaa 34164752  T
Q  208 gtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||| |  |||| | | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||  ||||||||||||    
T  34164751 gtctctctcttt--caaccctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtca 34164654  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||     
T  34164653 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga- 34164555  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||| ||| ||||||||||| |||||||||||||||||  |||||||||||||||    
T  34164554 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaaga 34164455  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  34164454 caaactcaac 34164445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 9 - 406
Target Start/End: Complemental strand, 25421396 - 25421000
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25421396 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 25421297  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25421296 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 25421198  T
Q  209 tctctctctcttccaac-tcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||  |||||| ||   |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  25421197 tctctctct--tccaacctctttcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcatgtca 25421100  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaatcgtgccacgattt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| || ||||||||    
T  25421099 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaatcatgtcacgattt 25421000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 506
Target Start/End: Complemental strand, 412200 - 411694
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| || || ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  412200 gagttcttacaaaagagatacaaaaagagttacaagaaattagatttgataagttcacaatgaacaa-ccctaatttctacctttttcccaatctcacca 412102  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||  |||||||||||| || |||||||||| || | ||||||||||    
T  412101 agacactcaatgattttctctcttcaaggtgtttcccatgttttcaacccaagagaagctctaatcaaag-actctaaaccctagagttactccctttga 412003  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    |||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||  ||||  ||||||| ||| |  ||||||||||||| |||||  |    
T  412002 tttctcaagtttctctctcttccaactcc--cttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacga-tttcctga 411906  T
Q  299 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacaatttccca-aatc 394  Q
    | |||||||||||  ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||||| ||||    
T  411905 ttgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatc 411806  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| ||| |||| ||  ||||||||| ||||| |||||| ||||||| || ||||| ||||||||| |||||||| |||||||| ||||||    
T  411805 gtgtcacgatttggca-ccctgcagactagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccaca 411707  T
Q  494 aatttgaagacaa 506  Q
    |||||||||||||    
T  411706 aatttgaagacaa 411694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 506
Target Start/End: Original strand, 3072829 - 3073334
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  3072829 gagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttctaccattttcccaatctcacca 3072927  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttg 198  Q
    ||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||| || |||||||||||    
T  3072928 agacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actctaaaccctagagtttctccctttg 3073026  T
Q  199 atttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    ||||||||||  | ||||||||||||||| |  | |||||||||||||||||||||  ||||||||| ||| ||| |  ||||||||||||| |||||      
T  3073027 atttcccaag--tttctctcttccaactctc-ttccaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacga-tttccag 3073122  T
Q  298 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatc 394  Q
    ||||||| ||||||  ||| ||| |||||||| | ||||||||||||||| ||| |||||||||||||||||    |||||||||| |||||| | ||||    
T  3073123 atcgtgtaacgattagtgcatccatcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatc 3073222  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| ||| ||||  |  | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| |||| |||||||||||| ||||||    
T  3073223 gtgtcacgatttggca-ccctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccaca 3073321  T
Q  494 aatttgaagacaa 506  Q
    |||||||||||||    
T  3073322 aatttgaagacaa 3073334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 231 - 513
Target Start/End: Original strand, 6136263 - 6136546
Alignment:
Q  231 cttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaa 329  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6136263 cttcaaatctgcacaagaa-acttaaatactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatttgcttccgtcccaaggaa 6136361  T
Q  330 cgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgattttgcacccctacaa-cctagctc 427  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||| ||||||| ||| ||||||||    
T  6136362 cgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttt-cacccctgcaaccctagctc 6136460  T
Q  428 acagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    || ||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  6136461 acggcatccgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaac 6136546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 278 - 513
Target Start/End: Complemental strand, 25421034 - 25420798
Alignment:
Q  278 atcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 377  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25421034 atcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 25420935  T
Q  378 tcac-aatttcccaaatcgtgccacgattttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttcc 475  Q
    |||| | |||||||||||||||||||| ||||||||||| ||| |||||||||| ||| |||||||||||||||| | ||||||| ||||||| ||||||    
T  25420934 tcacgattttcccaaatcgtgccacga-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacggtcccaaaattgtgtcacgatttcc 25420836  T
Q  476 ctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  25420835 ctgttcttccagaccacaaatttgaagacaatctcaac 25420798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 295 - 506
Target Start/End: Complemental strand, 13151070 - 13150857
Alignment:
Q  295 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaa 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||    
T  13151070 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaa 13150971  T
Q  393 tcgtgccacgattttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccatacca 491  Q
    ||||| ||||| ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||  |||    
T  13150970 tcgtgtcacga-tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagcca 13150872  T
Q  492 caaatttgaagacaa 506  Q
    |||||||||||||||    
T  13150871 caaatttgaagacaa 13150857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 3 - 501
Target Start/End: Original strand, 2171602 - 2172090
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcaccaa 100  Q
    ||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||    
T  2171602 gagttcttacaaa-gagatacaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccatttttcccaatctcaccaa 2171699  T
Q  101 -------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
           |||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| || | |||    
T  2171700 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctc 2171798  T
Q  193 cctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgatt 291  Q
    ||||||||||||||||| ||||||||||| | ||| | ||||||||||||||||||||||||  ||||||||||||| ||| |  |||||||||||||||    
T  2171799 cctttgatttcccaagtttctctctcttctagctcac-cttcaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt 2171897  T
Q  292 ttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa 391  Q
                        | ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| || |||||||||| |||||||||    
T  2171898 ------------------ggtacgtacgtcacaaggtacgacctgtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaa 2171979  T
Q  392 -atcgtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccatac 489  Q
     |||||| |||||||| ||| |||| ||| | ||||||| ||| | ||||||||||||||||| ||||| || |||| | ||||| ||||||||||| ||    
T  2171980 gatcgtgtcacgatttggca-ccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagac 2172078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 234 - 502
Target Start/End: Complemental strand, 5674512 - 5674242
Alignment:
Q  234 caaatctgcacaagaacacttta--tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||||| ||  ||||||||||||||||||| |||||||||| | |    
T  5674512 caaatctgcacaagaacactttaaatactagccttcctctgatacaatcgtgtcacgattt-ccagatcgtgtcacgatttgcgtacgtcccaaggtatg 5674414  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||| || ||| |||||||| ||| |||| ||| | |||||||     
T  5674413 accagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggca-ccctgcaaaccagctcacg 5674315  T
Q  431 gca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||| ||||||||| ||||| || |||||| ||||| ||||||||||| |||||||||||||||    
T  5674314 gcatcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaag 5674242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 21 - 291
Target Start/End: Original strand, 6097528 - 6097800
Alignment:
Q  21 tacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctct 118  Q
    |||||||| ||||||||||||||| || ||||||||||||| |||||| || ||||||||||| |||| ||||||||||||| ||||||||||||| ||     
T  6097528 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcc-taatttctaccatttttccaatctcaccaaaacactcaatgattttca 6097626  T
Q  119 ctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctct 217  Q
    ||   |||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| |||||||    
T  6097627 ctcaccaaggtgtttaccatgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctct 6097726  T
Q  218 cttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgatt 291  Q
    || |   ||| | ||||||||||||||||||||||||  ||||||| ||||| ||| |  |||||||||||||||    
T  6097727 ctactctctcac-cttcaaatctgcacaagaacacttaaatactagtcttcccctgataaaatcgtgtcacgatt 6097800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 241 - 513
Target Start/End: Original strand, 11857292 - 11857566
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| || ||||||||||||||||||  | | |||||||   ||| ||||    
T  11857292 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggacccaaggtt-gacaagtc 11857390  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc-accc 436  Q
    |||||||  | |||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| ||||||||| || ||      
T  11857391 cttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactagctcacggccactt 11857489  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  11857490 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 11857566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 13154005 - 13153893
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13154005 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 13153906  T
Q  108 aatgattctctct 120  Q
    |||||||||||||    
T  13153905 aatgattctctct 13153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 31404745 - 31404970
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||       
T  31404745 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttcccaatctcactga 31404842  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   |||||||||| | ||||||| |||||||||||| ||||||||||||  |||||||||||||||| | |      
T  31404843 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaaagaccctaaaccctaaagttgcct 31404941  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||||| |||||||||||    
T  31404942 cctttgatttcccaagtttctctctcttc 31404970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 22709362 - 22709632
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgc--gtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||| ||||| ||  |  |||||||||||||||| || | |||||||||||||||   || |||| ||||| |||    
T  22709362 aaatctgcacaagaacacttaaatactagtcttccactaataaaatcgtgtcacgattt-ccaagtcgtgtcacgatttgtatgtacgtcacaaggtacg 22709460  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||| ||| ||||||||||||||||| |  |||||||||| ||||||||| |||||| |||||||| ||| |||| ||| | ||||||      
T  22709461 accagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggca-ccctgcaaaccagctcatg 22709559  T
Q  431 gca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||||||||||| | ||||| ||||||||  ||||| ||||||||||| |||||||||||||||    
T  22709560 gcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaag 22709632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 348 - 513
Target Start/End: Complemental strand, 30125185 - 30125019
Alignment:
Q  348 gatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaa-tcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtg 445  Q
    |||||||||||||||||||||   |||||||||| |||||||||| |||||||||||||| ||  || | ||| ||||||||| ||||| ||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcc-tgcaaactagctcacggcacctcgaaatcgtg 30125087  T
Q  446 tcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  30125086 tcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 30125019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 5406270 - 5406494
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||       
T  5406270 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttcccaatctcaccaa 5406367  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   |||||||||| | ||||||  |||||| ||||| ||||||||||||| |||||||||||||||| | |      
T  5406368 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-actctaatcaaag-accctaaaccctaaagttgcct 5406465  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||||| |||||||||||    
T  5406466 cctttgatttcccaagtttctctctcttc 5406494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 5410595 - 5410819
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||       
T  5410595 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttcccaatctcaccaa 5410692  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   |||||||||| | ||||||  |||||| ||||| ||||||||||||| |||||||||||||||| | |      
T  5410693 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-actctaatcaaag-accctaaaccctaaagttgcct 5410790  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||||| |||||||||||    
T  5410791 cctttgatttcccaagtttctctctcttc 5410819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 22010465 - 22010190
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| || ||||||  | ||||||| |||||||| || | |||||||||||||||||  | | ||||||| | ||| |||    
T  22010465 gcacaagaacacaatatatactagtctccctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggta-gacaagt 22010367  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc-acc 435  Q
    ||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| ||| || || || ||     
T  22010366 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactaacttacggccact 22010268  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  22010267 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 22010190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 296 - 452
Target Start/End: Original strand, 5266453 - 5266610
Alignment:
Q  296 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atc 394  Q
    |||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||||   |||||||||| ||||||||| |||    
T  5266453 caatcgtgtcacgatttgcgtccgtttcaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 5266552  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgat 452  Q
    |||||||||||| ||   ||| ||| ||||||||| ||||| |||||||||||||||||    
T  5266553 gtgccacgatttggc-gtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 335 - 513
Target Start/End: Complemental strand, 14742106 - 14741927
Alignment:
Q  335 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac-agc 432  Q
    |||||||||||  |||||||||||||||||||||   |||||||||| |||| |||| ||||||||||||||| ||  || | ||| ||||||||| | |    
T  14742106 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcc-tgcaaactagctcacgacc 14742008  T
Q  433 acccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||  |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  14742007 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 14741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 16452424 - 16452625
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------gacactcaatgattctc 117  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||       |||||||||||||| ||    
T  16452424 ggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttc 16452522  T
Q  118 tctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
     ||   |||||||||| | |||||| ||||||||||||| |||||||||||||| |||||||| |||||| | ||  |||||||||||||||| ||||||    
T  16452523 actcaccaaggtgtttacaatgtttctcaacccaagaga-actctaatcaaaga-ccctaaactctaaagttgcttactttgatttcccaagtttctctc 16452620  T
Q  217 tcttc 221  Q
    |||||    
T  16452621 tcttc 16452625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 30834616 - 30834832
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caaga 102  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||  |||||||||||||||       |||||    
T  30834616 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaatgaacaaga 30834714  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   | |||||||| | |||||| ||||||||||||| ||||||||||||| ||| |||||||||||| | || |||||||||    
T  30834715 cactcaatgattttcactcaccgaggtgtttacaatgtttctcaacccaagaga-actctaatcaaag-accataaaccctaaagttgcttcctttgatt 30834812  T
Q  202 tcccaagtctctctctcttc 221  Q
    || ||||| |||||||||||    
T  30834813 tctcaagtttctctctcttc 30834832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 6438899 - 6439082
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||||||||||| |||| ||    ||| | ||||||    
T  6438899 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcac 6438998  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||   |||||||||||||| ||||||||||||||| |||||  |||||||||| |||| |||||||||| |||| |||||    
T  6438999 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaac 6439082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 5413464 - 5413688
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||| ||| |||||| |||||||||||||| |||||||||||||||       
T  5413464 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaa-ccctaatttctacctttttcccaatctcaccaa 5413561  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   ||| |||||| | ||||||  |||||| ||||| ||||||||||||| |||||||||||||||| | |      
T  5413562 tgaacaagacactcaatgattttcactcaccaatgtgtttacaatgtttcccaacccgagaga-actctaatcaaag-accctaaaccctaaagttgcct 5413659  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||||| ||||| |||||    
T  5413660 cctttgatttcccaagtttctctatcttc 5413688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 405 - 513
Target Start/End: Complemental strand, 34151938 - 34151829
Alignment:
Q  405 tttgcacccctacaacc-tagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||||| || ||||| ||| ||||||||| |||||||| ||| ||||||||||| |||||||||||||||||  |||||||||||||||    
T  34151938 tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaaga 34151839  T
Q  504 caatctcaac 513  Q
    ||| ||||||    
T  34151838 caaactcaac 34151829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 389 - 506
Target Start/End: Original strand, 6097860 - 6097977
Alignment:
Q  389 caaatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccat 487  Q
    ||||||||| |||||||| |||||| | ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||  |||||||||||||||||     
T  6097860 caaatcgtgtcacgatttagcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaa 6097958  T
Q  488 accacaaatttgaagacaa 506  Q
    |||||||||||||||||||    
T  6097959 accacaaatttgaagacaa 6097977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 16569110 - 16568927
Alignment:
Q  25 aaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaagacactcaatgattctctctt- 121  Q
    |||||||||||||||||||||| | |||| |||||| ||||||| |||||||||||||| ||||| ||||||   ||||||||||||||||| || |||     
T  16569110 aaaggttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccattttctcaatct---caagacactcaatgattttcactta 16569014  T
Q  122 tacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagt 209  Q
      |||||||||| | |||||| | ||||||||||| ||||||||||||| ||||| |||||||||  |  | |||||||||||||||||    
T  16569013 cccaaggtgtttacaatgtttccaaacccaagaga-actctaatcaaag-acccttaaccctaaatttaattcctttgatttcccaagt 16568927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 413
Target Start/End: Complemental strand, 28155309 - 28155172
Alignment:
Q  277 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 375  Q
    |||||||||||||||| || | ||||||||||||| |||  | ||||| |||   |||||||||||||||  |||||||||| ||||||||||  |||||    
T  28155309 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagtccttatcagagatacttaaccagcaagtttctggatcg 28155211  T
Q  376 tgtcacaatttcccaa-atcgtgccacgattttgcaccc 413  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  28155210 tgtcacgatttcccaagatcgtgccacgattttgcaccc 28155172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 277 - 507
Target Start/End: Original strand, 16839092 - 16839323
Alignment:
Q  277 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 375  Q
    |||||||||||||||| || | ||||||||||||| |||  | |||||||||   |||||||||||||||  |||||||||| ||||||||||   ||||    
T  16839092 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagtccttatcagagatacttaaccagcaagtttctgaatcg 16839190  T
Q  376 tgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttc 474  Q
    |||||| ||||||||| ||||||||||||||||||  ||    ||| | |||||| ||| |    |||||||||||||  | |||||| | ||| ||| |    
T  16839191 tgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcc 16839290  T
Q  475 cctgttcttccataccacaaatttgaagacaat 507  Q
     ||||||||||| ||||||||||||||| ||||    
T  16839291 tctgttcttccaaaccacaaatttgaagccaat 16839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 9183101 - 9183327
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||| ||||||| |||| ||||||||||||||||| ||||| |||||||||      
T  9183101 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaac-aaccctaatttctacccattttctcaatctcacca 9183198  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  ||||||| |||| ||||||||||||| ||||| |||||||||| | |    
T  9183199 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaggaga-actctaatcaaag-accctcaaccctaaagttac 9183296  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  9183297 ctcctttgatttcccaagtttctctctcttc 9183327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 33160422 - 33160652
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacc--cttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||||| |||| ||| ||||||||||||   ||||||||||||||||    
T  33160422 gagttcttacaaa-gagatacaaaagagttacaagaaattagctttgacaagttcacaaagaac-aactctaatttctacctttttttcccaatctcacc 33160519  T
Q  99 -------aagacactcaatga-ttctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagctt 189  Q
           |||||||||||||| || || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| || || |||||||||| |     
T  33160520 aatgaataagacactcaatgatttttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-actctcaaccctaaagtta 33160617  T
Q  190 ctccctttgatttcccaag-tctctctctcttcca 223  Q
    |  ||||||||| |||||| | |||||||||||||    
T  33160618 cctcctttgattccccaagttttctctctcttcca 33160652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 33330117 - 33329940
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| | ||||||    
T  33330117 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33330018  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |    |||||||||||||  | |||||| | ||| ||| | ||||||||||| ||||||||||||||| ||||    
T  33330017 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 16652773 - 16652717
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaac 16652717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 6005822 - 6005901
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||    
T  6005822 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgc 6005901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 33335614 - 33335535
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||    
T  33335614 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgc 33335535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 6097786 - 6097858
Alignment:
Q  297 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt 367  Q
    |||||||||||||||  ||||| |||||| ||| ||||||||||||||||| ||| |||||||||||||||||    
T  6097786 aatcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagttt 6097858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 2973009 - 2973107
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| |||||||||||||||||    
T  2973009 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcacca 2973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 21589029 - 21588931
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  21589029 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcacca 21588932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 21593762 - 21593664
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  21593762 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcacca 21593665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 502
Target Start/End: Original strand, 23896880 - 23896944
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||||||||||||| ||||||||||||||| ||||  |||||||| || |||||||||||||||    
T  23896880 aaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 26253666 - 26253598
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaa 506  Q
    ||||| ||||||||| ||||| ||||||||| ||||| |||||||| || |||||||||||||||||||    
T  26253666 aaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagacaa 26253598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 4045494 - 4045423
Alignment:
Q  30 ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||| | |||| ||| || ||||||||||||||||||||| ||||||||||||| ||||    
T  4045494 ttacaagaaattagcttcaacaagctcataaagaacaaaccctaatttctaccattttcccaatctctccaa 4045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 5343880 - 5343959
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||    
T  5343880 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 5343959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3038971 - 3039071
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||  | ||| ||||||||||| ||||||||||||||||  |||||||||||||||    
T  3038971 aagagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaac-aaccctaatttctaccaattttcccaatctcac 3039068  T
Q  98 caa 100  Q
    |||    
T  3039069 caa 3039071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 14737342 - 14737174
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| ||||| |||  | ||||||| |||||||| || | ||||||||||||| |||  | | |||||||   ||| |||    
T  14737342 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggtt-gacaagt 14737244  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattt 406  Q
    ||||||||  |||||||||||||||||||||   |||||||||| |||| |||| |||||||||||||||    
T  14737243 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgattt 14737174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 16567265 - 16567090
Alignment:
Q  33 caagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaagacactcaatgattctctct-ttacaaggt 129  Q
    |||||||||||||| | |||| ||||||  |||||| ||||||||||| || ||||||||||||||   ||||||||||||||| || ||    ||||||    
T  16567265 caagaaattagcttaaacaagctcacaaaaaacaaaacctaatttctaaccattttcccaatctca---agacactcaatgattttcactcacccaaggt 16567169  T
Q  130 gtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagt 209  Q
    |||| | |||||| | ||||||||||| ||||||||||||| ||||| |||||||||| |    |||||||||||||||||    
T  16567168 gtttacaatgtttccaaacccaagaga-actctaatcaaag-acccttaaccctaaagttaactcctttgatttcccaagt 16567090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 17758121 - 17758026
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||||||||||||    
T  17758121 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcac 17758026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 14737142 - 14737086
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 14737086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 22424895 - 22424995
Alignment:
Q  3 gagttcttacaaaagggatacaaaa---ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||| | |||||||||   |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||| ||||||||||    
T  22424895 gagttcttacaaa-gagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttttccaatctcac 22424992  T
Q  98 caa 100  Q
    |||    
T  22424993 caa 22424995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 28137503 - 28137669
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||||| ||||||       ||||||||||||||||| ||     
T  28137503 ggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattttcccattctcaccaatgaacaagacactcaatgattttca 28137601  T
Q  119 ct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaag 186  Q
    ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| ||||||||||    
T  28137602 ctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaag 28137669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 3808778 - 3808877
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  |||||||||||||||| || | |||| |||||| |||||| ||||||||||||||  ||||||||||||||||    
T  3808778 gagttcttacaaa-gagatacaaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa-ccctaatttctacctattttcccaatctcacc 3808875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 17763062 - 17762990
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    ||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||| ||||||||||||    
T  17763062 gttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttctcaatctcaccaa 17762990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 507
Target Start/End: Original strand, 5343990 - 5344057
Alignment:
Q  440 atcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||||  | |||||||| ||| ||||| ||||||| ||| ||||||||||||||| ||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaat 5344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 5017026 - 5016976
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||  ||||||||||| ||||||||||||||| ||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 26830193 - 26830289
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||| ||||||||||||| |||| |||||||||||    
T  26830193 gagttcttacaaa-gagatacaaatggattacaagaaattagcttcaacaagctcacaaagaac-aactctaatttctacccatttttccaatctcacc 26830289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 31086003 - 31085953
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||| | ||||||||||||||| ||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 33211385 - 33211481
Alignment:
Q  124 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||  ||||| | |  ||||||||||||||||| |||||||||||    
T  33211385 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaactgtaaagttacctcctttgatttcccaagtttctctctcttc 33211481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 5043725 - 5043630
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcac 97  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| ||||||| |||||||||||| | ||||| |||||||||    
T  5043725 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctactcattttctcaatctcac 5043630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 26954382 - 26954450
Alignment:
Q  29 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 97  Q
    |||||||||||||||||| | |||| |||||| |||||| ||||||||| ||||  ||||||||||||||    
T  26954382 gttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttataccaatttcccaatctcac 26954450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 386
Target Start/End: Complemental strand, 26253808 - 26253698
Alignment:
Q  277 aatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 374  Q
    ||||||| |||||||| || |||||||||||||||  | ||| |||| ||| | ||||||||||||||||  | | ||||||| ||||||||| |  |||    
T  26253808 aatcgtgccacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaagtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatc 26253710  T
Q  375 gtgtcacaattt 386  Q
    ||||||| ||||    
T  26253709 gtgtcacgattt 26253698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 459 - 507
Target Start/End: Complemental strand, 28155145 - 28155097
Alignment:
Q  459 atcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||| ||| | ||||||||||| ||||||||||||||| ||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 379; Significance: 0; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 1 - 513
Target Start/End: Complemental strand, 9036516 - 9036004
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036516 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 9036417  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||    
T  9036416 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagag-ttgcccctttgat 9036318  T
Q  201 ttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    |||||||||||||||||||| |||   || |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  9036317 ttcccaagtctctctctctttcaaactcctcttcaaatctgcacaagaacactttatactagtcttcctctgttgaaatcgtgtcacgattttcccaatc 9036218  T
Q  301 gtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt-cccaaatcgtgcc 399  Q
    |||||||||| |||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | |||| ||| |    
T  9036217 gtgtcacgatctgcgtaacacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgac 9036118  T
Q  400 acgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
    |||| |||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  9036117 acgaatttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 9036019  T
Q  499 gaagacaatctcaac 513  Q
    |||||||||||||||    
T  9036018 gaagacaatctcaac 9036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 44203722 - 44203219
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44203722 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 44203623  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  44203622 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 44203526  T
Q  209 tctctctctcttccaactcccac--ttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtc 305  Q
    |||||||||  |||||||| |||  ||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  44203525 tctctctct--tccaactctcacccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtc 44203428  T
Q  306 acgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgat 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||     
T  44203427 acgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga- 44203329  T
Q  405 tttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
    ||||||||||| ||| |||||||||| |||||   |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  44203328 tttgcacccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 44203229  T
Q  504 caatctcaac 513  Q
    ||||||||||    
T  44203228 caatctcaac 44203219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 513
Target Start/End: Complemental strand, 21054058 - 21053541
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21054058 aagagttcttacaaaagggatacaaaaggttgcaagaaattagatttgacaagttcacaatgaacaaaccctaatttctacacttttcccaatctcacca 21053959  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  21053958 agacactcaatgattttttctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttga 21053859  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||  ||||||| ||| |  |||||||||||||||| ||  |    
T  21053858 tttcccaagtctctctctcttccaactctcacttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt-cctga 21053760  T
Q  299 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacaatttccca-aatc 394  Q
    |||||||||||||  ||| |||||| ||||| | ||||||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||||| ||||    
T  21053759 tcgtgtcacgattggtgcatccgtctcaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatc 21053660  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| |||||  | ||  ||||||||| ||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  21053659 gtgtcacgatttggcacct-tgcattctagctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 21053561  T
Q  494 aatttgaagacaatctcaac 513  Q
    ||||||||||||||||||||    
T  21053560 aatttgaagacaatctcaac 21053541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 506
Target Start/End: Complemental strand, 40282477 - 40281967
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40282477 aagagttcttacaaaagggatacaaaaggttacaagaaattagattagacaagttcacaatgaactaaccctaatttctacccttttcccaatctcacca 40282378  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  40282377 agacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttga 40282278  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||  ||||  ||||||| ||| |  ||||||||||||| |||||  |    
T  40282277 tttcccaagtttctctctcttccaactctctcttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacga-tttcctga 40282179  T
Q  299 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacaatttccca-aatc 394  Q
    |||||||||||||  ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||| ||| ||||    
T  40282178 tcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatc 40282079  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| ||| |||| ||||||||||||| ||||| | ||||||||||||||| ||||| ||||||||| |||||||| |||||||| ||||||    
T  40282078 gtgtcacgatttggca-ccctgcaacctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccaca 40281980  T
Q  494 aatttgaagacaa 506  Q
    |||||||||||||    
T  40281979 aatttgaagacaa 40281967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 506
Target Start/End: Original strand, 20622305 - 20622812
Alignment:
Q  1 aagagttcttacaaaa--gggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 97  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20622305 aagagttcttacaaaaaagggatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttctacccttttcccaatctcac 20622403  T
Q  98 caagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctcccttt 197  Q
    ||||||| ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||    
T  20622404 caagacagtcaatgattttccctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccattt 20622503  T
Q  198 gatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt--tatactagccttcctctgttgcaatcgtgtcacgattttcc 295  Q
    |||||||||||  ||||||||||||||| ||| |||||||  |||||||||||||||  ||||||||||||||||||  ||||| |||||||||||||||    
T  20622504 gatttcccaag--tctctctcttccaac-cccccttcaaagatgcacaagaacactttatatactagccttcctctgaagcaattgtgtcacgattttcc 20622600  T
Q  296 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatc 394  Q
     |||| || |||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  20622601 aaatcatgccacgatttgcgtaccacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatc 20622700  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| ||| |||| ||  ||||||||| ||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  20622701 gtgtcacgatttggca-ccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 20622799  T
Q  494 aatttgaagacaa 506  Q
    |||||||||||||    
T  20622800 aatttgaagacaa 20622812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 3 - 506
Target Start/End: Complemental strand, 9987299 - 9986794
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaag 101  Q
    |||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9987299 gagttcttgcaaaagggatacaaaaggttgcaagaaattagattagacaagttcacaatgaacaa-ccctaatttctacccttttcccaatctcaccaag 9987201  T
Q  102 acactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  9987200 acactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatt 9987101  T
Q  202 tcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||||||||  ||||||||| ||| ||| |  ||| ||||||||| |||||  |||    
T  9987100 tcccaagtctatctctcttccaactcac-cttcaaatctgcacaagaacacttaaatactagccctccactgataaaattgtgtcacga-tttccagatc 9987003  T
Q  301 gtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc-aaatcgtg 397  Q
    |||||||||||  ||| |||||||||||| | ||||||||||||| | ||| |||||||||||||||||    |||||||||| ||||||| ||||||||    
T  9987002 gtgtcacgattggtgcatccgtcccaaggtatgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtg 9986903  T
Q  398 ccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaat 496  Q
     |||||||| ||| | || ||  | ||||||| ||||| ||||||||||| |||||  |||| ||||||||| ||||||||||||||||| |||||||||    
T  9986902 tcacgatttggca-cactgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaat 9986804  T
Q  497 ttgaagacaa 506  Q
    ||||||||||    
T  9986803 ttgaagacaa 9986794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 3 - 498
Target Start/End: Complemental strand, 51765495 - 51765007
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttc--ccaatctcac 97  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| |    ||||||||||||||||||||||  ||||||  ||    
T  51765495 gagttcttacaaaagagatacaaaaggggttacaagaaattagctttgacaagttcacaaaggtacaaccctaatttctacccttttctcccaatcaaac 51765396  T
Q  98 caaga------cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |||||      ||||||||||||  | ||   |||||||||| | |||||| ||||||||||||  ||||||||||||| |||||||||||| || | ||    
T  51765395 caagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttccaacccaagagaagctctaatcaaaga-ccctaaaccctagagttact 51765297  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacga 289  Q
    |||||||||||||||||| |||| |||||||||||||  |||| ||||||||||||||||||||  ||||||||||||| ||| |  |||||||||||||    
T  51765296 ccctttgatttcccaagtttctcactcttccaactcc--cttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacga 51765199  T
Q  290 ttttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc 389  Q
    ||                    | ||| |||| ||||| | ||||||||||||||| ||| |||||||||||||||||    |||||||||| ||| | |    
T  51765198 tt------------------ggtacgtacgtcacaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctc 51765117  T
Q  390 aa-atcgtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccat 487  Q
    || |||||| |||||||| ||| |||| ||| | ||||||| ||| | |||||||||||||||||  |||| ||||||||| ||||| |||||||||||     
T  51765116 aagatcgtgtcacgatttggca-ccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccag 51765018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 255 - 452
Target Start/End: Complemental strand, 24793906 - 24793709
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactt 354  Q
    |||||||| |||||||||  ||||||||| |||||||| ||  |||||||||||||||||||| | |||||||   ||||||||||||||||||||||||    
T  24793906 tatactagtcttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatactt 24793808  T
Q  355 aacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgat 452  Q
    ||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| ||||| |||||||||||||||||    
T  24793807 aacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 331 - 513
Target Start/End: Complemental strand, 44023561 - 44023378
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||| ||    ||| | ||||||    
T  44023561 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 44023462  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||   |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  44023461 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaac 44023378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 235 - 502
Target Start/End: Complemental strand, 19366051 - 19365781
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||| ||||| ||| |  |||||||||||||||| || | ||||||||||||| |  ||| |||| ||| | |||    
T  19366051 aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaatgtacg 19365953  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||| |||||||||  ||| | ||||||||||||||| |  |||||||||| ||||||||| |||||| |||||||| |||||| | ||| | |||||||     
T  19365952 acctgtccttatcctggaaaattaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccc-tgcaaaccagctcacg 19365854  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||||||||||||| ||||| ||||||||| ||||| |||||||| || |||||||||||||||    
T  19365853 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 24787100 - 24786933
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||| |||||||||  ||||||||| |||||||| ||  |||||||||||||||||||| | |||||||   ||||||||    
T  24787100 gcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtc 24787002  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattt 406  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||||||| |||||||||||||||    
T  24787001 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 24786933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 39445898 - 39446081
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||||||||||||||  ||||||||||  ||||||||| ||||||||||||||| ||  ||    ||| | ||||||    
T  39445898 gaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 39445997  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     ||| |  ||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  39445998 ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaac 39446081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 297 - 502
Target Start/End: Complemental strand, 19361133 - 19360925
Alignment:
Q  297 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-at 393  Q
    ||||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  |||||||||| ||||||||| ||    
T  19361133 aatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagat 19361034  T
Q  394 cgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccac 492  Q
    |||| |||||||| |||||| | ||| | ||||||| ||| | | ||||||||||||||||||||| ||||||||| ||||| |||||||| || |||||    
T  19361033 cgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccac 19360935  T
Q  493 aaatttgaag 502  Q
    ||||||||||    
T  19360934 aaatttgaag 19360925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 235 - 386
Target Start/End: Complemental strand, 24202513 - 24202360
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||| ||||||||||||||| | |||||||||||||||| | ||||||||||||||||| ||  ||||||||||||||||  ||| |||||||||  | |    
T  24202513 aaatatgcacaagaacacttaaatactagccttcctctgatacaatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtgcgtcccaagatatg 24202415  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt 386  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||| ||||    
T  24202414 accagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattt 24202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 20762755 - 20762544
Alignment:
Q  19 gatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------gacactc 107  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  | ||||||||||||       || ||||    
T  20762755 gatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttctcaatctcaccaatgaacaagatactc 20762657  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttccca 206  Q
    ||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || ||||||||||||||    
T  20762656 aatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttccca 20762559  T
Q  207 agtctctctctcttc 221  Q
    ||| |||||||||||    
T  20762558 agtttctctctcttc 20762544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 25439583 - 25439406
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||  ||||||||||| ||||||||| ||||||||||||||||||| ||    ||| | ||||||    
T  25439583 gaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcac 25439484  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |  |||||||||||||||  | |||||||||||| ||| | ||||||||||| ||||||||||||||| ||||    
T  25439483 ggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 331 - 502
Target Start/End: Original strand, 41391002 - 41391173
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  ||||||||| |||||||||||   ||| |||||| ||||||||| ||||||||||||||| ||  || | ||| || ||||||    
T  41391002 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactggctcac 41391100  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
     ||| |  ||||||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  41391101 ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 41391173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 25444776 - 25444599
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctac-aacctagctca 428  Q
    |||||||||||||||  |||||||||| | ||||||||  ||||||||||| ||||||||| |||||||||||||||||||  ||||| ||| | |||||    
T  25444776 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgca-tcctacaaacttggctca 25444678  T
Q  429 cagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    | ||| |  |||||||||||||||  | |||||||||||| ||| | ||||||||||| ||||||||||||||| ||||    
T  25444677 cggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 331 - 513
Target Start/End: Complemental strand, 1054698 - 1054515
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  ||    ||| | ||||||    
T  1054698 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 1054599  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||   |||||| ||||||| ||||||||||| ||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  1054598 ggcacctccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaac 1054515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 3156963 - 3156736
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| | ||||||||||| |||||| ||||||||||||||| ||||| |||||||||||    
T  3156963 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacccattttctcaatctcacca 3156866  T
Q  100 a-------gacactcaatgattctctctttacaaggtgtttcccatgttttcaa-cccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |       |||||||||||||| || ||   || ||||||| | |||||| ||| ||||||||| |||||||||||||| |||| |||||||||| | |     
T  3156865 atgaacaagacactcaatgattttcactcaccagggtgtttacaatgtttccaaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacc 3156768  T
Q  192 ccctttgatttcccaagtctctctctcttcca 223  Q
     ||||||||||||||||| |||||||||||||    
T  3156767 tcctttgatttcccaagtttctctctcttcca 3156736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 28220296 - 28220522
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc- 98  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| |||||| |||||||||     
T  28220296 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttccgaatctcacca 28220393  T
Q  99 ------aagacactcaatgattctctct-ttacaaggtgtttcccatg-ttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
          |||||||||||||||| || ||    |||||||||| | ||| ||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  28220394 atgaataagacactcaatgattttcactcacccaaggtgttttcaatgcttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 28220491  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  28220492 ctcctttgatttcccaagtttctctctcttc 28220522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 3189428 - 3189203
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaa-tctcacca 99  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||    
T  3189428 gagttcttacaaaaag-atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttataccctttttccaaatctcacca 3189331  T
Q  100 a-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |       |||||||| ||||| || ||   |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| |||||||||| | |     
T  3189330 atgaacaagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacc 3189233  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  3189232 tcctttgatttcccaagtttctctctcttc 3189203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 3198245 - 3198020
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaa-tctcacca 99  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||    
T  3198245 gagttcttacaaaaag-atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttataccctttttccaaatctcacca 3198148  T
Q  100 a-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |       |||||||| ||||| || ||   |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| |||||||||| | |     
T  3198147 atgaacaagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacc 3198050  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  3198049 tcctttgatttcccaagtttctctctcttc 3198020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 3207084 - 3206859
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaa-tctcacca 99  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||    
T  3207084 gagttcttacaaaaag-atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttataccctttttccaaatctcacca 3206987  T
Q  100 a-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |       |||||||| ||||| || ||   |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| |||||||||| | |     
T  3206986 atgaacaagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacc 3206889  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  3206888 tcctttgatttcccaagtttctctctcttc 3206859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 13316432 - 13316521
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaag 101  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||    
T  13316432 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctcaccaag 13316521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 24202376 - 24202264
Alignment:
Q  390 aaatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccata 488  Q
    |||||||| |||||||| |||||| | ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| |    
T  24202376 aaatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaga 24202278  T
Q  489 ccacaaatttgaag 502  Q
    ||||||||||||||    
T  24202277 ccacaaatttgaag 24202264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 13604172 - 13604104
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaa 506  Q
    |||||||| |||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  13604172 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaa 13604104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 254
Target Start/End: Complemental strand, 31659335 - 31659078
Alignment:
Q  4 agttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||| | |||||||| || ||||||||||||||||| | |||| |||||| |||||  ||||||||||||||| |||| |||||||||||||    
T  31659335 agttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacag-ccctaatttctacccatttttccaatctcaccaa 31659238  T
Q  101 -------gacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
           |||||||||||||| || ||   | ||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |     
T  31659237 tgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttccgaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacc 31659140  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt 254  Q
     ||||||||||||||||| ||||||||||| | ||| | ||  ||||||||| ||||||||||    
T  31659139 tcctttgatttcccaagtttctctctcttcaagctctctctcaaaatctgca-aagaacactt 31659078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 37503647 - 37503850
Alignment:
Q  26 aaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattct 116  Q
    |||||||||||||||||||||  |||||||||||| |||| ||||||||||| ||||| |||||||||||||||       ||||||||||||||||| |    
T  37503647 aaggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttttacccattttcccaatctcaccaatgaacaagacactcaatgatttt 37503745  T
Q  117 ctct-ttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctc 214  Q
    | ||    |||||||||| | || |||| |||||||| ||| ||||||||||||| ||||| ||||||||||   |  ||||||||||||||||| ||||    
T  37503746 cactcacccaaggtgtttacaatattttccaacccaataga-actctaatcaaag-accctcaaccctaaagtcacctcctttgatttcccaagtttctc 37503843  T
Q  215 tctcttc 221  Q
    |||||||    
T  37503844 tctcttc 37503850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 13316518 - 13316614
Alignment:
Q  124 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || ||||||||||||||||| |||||||||||    
T  13316518 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgctacctttgatttcccaagtttctctctcttc 13316614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 44455258 - 44454999
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    |||||||||||||| | ||||||| | ||||||||||||||| || | ||||||||||| |||||| ||||||||||||||| |||||||||||||||      
T  44455258 gagttcttacaaaaag-atacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 44455161  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         |||||||||||||| || || ||    |||||||||| | ||||||  |||||||||| | ||||||||||||| ||||| |||||||||| | |    
T  44455160 atgaacaagacactcaatggttttcactcacccaaggtgtttacaatgtttcccaacccaaga-aaactctaatcaaag-accctcaaccctaaagttac 44455063  T
Q  191 tccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt 254  Q
      |||||||||| |||||| ||||||||| | | ||| | |||| ||||||||||||||||||||    
T  44455062 ctcctttgatttaccaagtttctctctctacaacctctc-cttcaaaatctgcacaagaacactt 44454999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 8550857 - 8551071
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| |||||||||||||||      
T  8550857 gagttcttacaaa-gggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcacaa 8550954  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    ||| |||||| | |||||| | ||||||||||| ||||||||||||| ||||| |||||||||| |      
T  8550955 atgaacaagacactcaatgattttcactcacccaatgtgtttacaatgtttcttaacccaagaga-actctaatcaaag-acccttaaccctaaagttaa 8551052  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  8551053 ctcctttgatttcccaagt 8551071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 28223491 - 28223717
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| | |||||||| || || ||| || |||||||||||| |||||||||||||||||    
T  28223491 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcagaaagatcaa-ccataatttctacccattttcccaatctcacca 28223588  T
Q  100 a-------gacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    |       |||||||||||||| || ||   | ||||||| | | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |    
T  28223589 atgaacaagacactcaatgattttcactcacccaaggtgtcttcaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttac 28223686  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  28223687 ctcctttgatttcccaagtttctctctcttc 28223717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 406
Target Start/End: Original strand, 41398657 - 41398733
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattt 406  Q
    |||||||||||||||| ||||||||| |||||||||||   |||||||||| ||||||||| |||||||||||||||    
T  41398657 gaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 41398733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 37168396 - 37168297
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||    
T  37168396 gagttcttacaaa-gagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcacc 37168299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 834237 - 834451
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta-cccttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| |||| |||||||||||||| || |||||||||||||||      
T  834237 gagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctatccattttcccaatctcacaa 834334  T
Q  98 -----caagacactcaatgattctctc-tttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || |     |||||||||| | ||||||  |||||||||||| ||| ||||||||| ||||| |||||||||| | |    
T  834335 atgaacaagacactcaatgattttcacgcacccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaag-accctcaaccctaaagttac 834432  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  834433 ctcctttgatttcccaagt 834451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 49918448 - 49918350
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||||| |||||||||||    
T  49918448 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttctcaatctcacca 49918351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 7482300 - 7482399
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||| ||||||||||||    
T  7482300 gagttcttacaaa-gagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttacccaatctcacc 7482397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28265622 - 28265722
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| ||||||||||||||||  ||||||||||||| |    
T  28265622 aagagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttctacctattttcccaatctcgc 28265719  T
Q  98 caa 100  Q
    |||    
T  28265720 caa 28265722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 37559938 - 37560165
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt--gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||   |||||||||||| |||| ||| ||||||||||||| |||||| ||||||||     
T  37559938 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaac-aactctaatttctacccattttcctaatctcacc 37560035  T
Q  98 ------caagacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagctt 189  Q
          ||||||||||||||||| || ||   | || |||||| | |||||||| ||||||||||| ||||||||||||| ||||| |||| ||||| |     
T  37560036 aatgaacaagacactcaatgattttcactcacctaatgtgtttacaatgttttcaaacccaagaga-actctaatcaaag-accctcaaccttaaagtta 37560133  T
Q  190 ctccctttgatttcccaagtctctctctcttc 221  Q
    |  | ||||||||| ||||| |||||||||||    
T  37560134 cctcatttgatttctcaagtttctctctcttc 37560165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 1833620 - 1833394
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttgacaag-ttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| | |||||||||| ||||||| |  || ||||||| |||||| ||||||||||||||| |||||||||||||||      
T  1833620 gagttcttacaaa-gagatacaaatgagttacaagaatttagcttcaatagattcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 1833523  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct-t 189  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  ||| |||||||| ||||||||||||| ||||| |||| ||||| | |    
T  1833522 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaatccaagaga-actctaatcaaag-accctcaaccttaaagttat 1833425  T
Q  190 ctccctttgatttcccaagtctctctctcttc 221  Q
    || ||||||||||||||||| |||||||||||    
T  1833424 ct-cctttgatttcccaagtttctctctcttc 1833394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 50169306 - 50169378
Alignment:
Q  29 gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||| |||||||| |||||| |||| ||||||||||||||||| |||| |||||||||||||    
T  50169306 gttacaagaaattagctttgacaagctcacaaagaac-aaccctaatttctacccatttttccaatctcaccaa 50169378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 196978 - 197192
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| | |||||||||||||| ||| | |||| |||||| |||||| ||||||||||||||  ||||| |||||||||      
T  196978 gagttcttacaaa-gggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaacaa-ccctaatttctaccaattttctcaatctcacaa 197075  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  197076 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 197173  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||| ||||||    
T  197174 ctcctttgattttccaagt 197192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 3847191 - 3847405
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| || |||||| || ||||||| | |||  |||||| |||||| ||||||||||||||| |||||||||||||||      
T  3847191 gagttcttacaaa-gggatacaaatgggttacaaaaatttagcttaaacaaactcacaaagaacaa-ccctaatttctacccattttcccaatctcacaa 3847288  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| |||||  ||||||||| | |    
T  3847289 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcgaccctaaagttac 3847386  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  3847387 ctcctttgatttcccaagt 3847405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 4552707 - 4552805
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| | ||||| |||||||||||||| ||||| |||||||||||    
T  4552707 gagttcttacaaa-gggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaa-cctaatttctacccattttctcaatctcacca 4552804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 13547159 - 13547257
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||| |||||| | |||| |||||| |||||| ||||||||||||||| |||||||||||||||||    
T  13547159 gagttcttacaaa-gagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 13547256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 24793723 - 24793667
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 24793667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 37033170 - 37033241
Alignment:
Q  30 ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    ||||||||||||||||| | |||| |||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  37033170 ttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcaccaa 37033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 41361012 - 41360914
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| ||||||||| |||||||||||| |||||||||||||||||    
T  41361012 gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacc-taatttctacccattttcccaatctcacca 41360915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 47255410 - 47255508
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  47255410 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttccaatctcacca 47255507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 37879005 - 37879079
Alignment:
Q  27 aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||  ||||||||||||||||||    
T  37879005 aggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacctattttcccaatctcaccaa 37879079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 43988133 - 43988054
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| |||| |||| |||||| |||||||||||    
T  43988133 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgc 43988054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 47115260 - 47115171
Alignment:
Q  14 aaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 100  Q
    |||| |||||||||  |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||  ||||||||||||||||||    
T  47115260 aaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctaccaattttcccaatctcaccaa 47115171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 8871143 - 8871213
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 97  Q
    ||||||||||||||||||| | | |  |||||| ||||||||||||||||||||| |||||| ||||||||    
T  8871143 ggttacaagaaattagcttcaacgaactcacaaagaacaaaccctaatttctaccattttccaaatctcac 8871213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 11348771 - 11348698
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||  ||||||||||||||||||    
T  11348771 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctaccaattttcccaatctcaccaa 11348698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 13598967 - 13599017
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 19754593 - 19754494
Alignment:
Q  3 gagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc--ttttcccaatctcacc 98  Q
    ||||||||||||| | ||||||||  |||||||||||||||||||  ||||| |||||| |||| |||||||||||||||||  ||||| ||||||||||    
T  19754593 gagttcttacaaa-gagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttctcaatctcacc 19754496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 29136320 - 29136247
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||| |||||||||||||| | |||| |||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  29136320 ggttccaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcaccaa 29136247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 502
Target Start/End: Complemental strand, 21536170 - 21536125
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 48382505 - 48382441
Alignment:
Q  14 aaagggatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 78  Q
    |||| |||||||| |||||||||||||||| ||| |||||||||||| || |||||||||||||||    
T  48382505 aaagtgatacaaataggttacaagaaattaactt-acaagttcacaaagatcaaaccctaatttct 48382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 928071 - 928123
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 79  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||||||||||    
T  928071 ggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttcta 928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 3460778 - 3460710
Alignment:
Q  20 atacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccctttt 86  Q
    |||||||||| |||||| |||||||||| | |||| |||||| |||||||| |||||||||||||||||    
T  3460778 atacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaatttctaccctttt 3460710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 13549070 - 13549168
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||| |||||||| || | |||| |||||| |||||| ||||||||||||||| |||||||||||||||||    
T  13549070 gagttcttacaaa-gagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 13549167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 23555335 - 23555433
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | |||| |||||||||| || | ||||||||||| |||||| ||||||||||||||| |||| ||||||||||||    
T  23555335 gagttcttacaaa-gagatacaaatgagttataagaaattagtttcaacaagttcacaaagaacaa-ccctaatttctacccatttttccaatctcacca 23555432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 31925777 - 31925875
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| | ||||||||||||||| |||| ||| ||||||||    
T  31925777 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-atccctaatttctacccatttttccactctcacca 31925874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 32737015 - 32736952
Alignment:
Q  19 gatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 82  Q
    |||||||| ||||||||| |||||||||| | ||||||| || ||||||||||||||||||||||    
T  32737015 gatacaaagaggttacaaaaaattagcttaa-aagttcataaagaacaaaccctaatttctaccc 32736952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 35109556 - 35109493
Alignment:
Q  19 gatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 82  Q
    |||||||| |||||||||||||||||||| | ||| |||||| ||||||||| ||||||||||||    
T  35109556 gatacaaataggttacaagaaattagcttaa-aagctcacaaagaacaaaccttaatttctaccc 35109493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 37070334 - 37070378
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 42298045 - 42298143
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| ||||||  ||| ||||||||||||||||  |||||||||||||||||    
T  42298045 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttctaccaattttcccaatctcacca 42298142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 22079404 - 22079322
Alignment:
Q  14 aaagggatacaaaa-ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    |||| ||||||||| ||||||||||||||||| || ||||| |||||| ||||||| | ||||||||||| |||| ||||||||    
T  22079404 aaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaa-cataatttctaccatttttccaatctc 22079322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 10925191 - 10925095
Alignment:
Q  124 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| |||||||||| | |  |||||||||| |||||| |||||||||||    
T  10925191 caaggtgtttacaatgtttcccaacccaagaga-actataatcaaaga-ccctcaaccctaaagttacctcctttgattttccaagtttctctctcttc 10925095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 12318592 - 12318685
Alignment:
Q  3 gagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    ||||||||| | |||  |||||||| |||||||||||||||||||  ||||| || | ||||||||| |||||||||||||| ||||| ||||||    
T  12318592 gagttcttaaagaagacatacaaaatggttacaagaaattagcttcaacaagctctccatgaacaaa-cctaatttctacccatttccaaatctc 12318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 34603649 - 34603576
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||  ||||||||||||    
T  34603649 ggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattttttcaatctcaccaa 34603576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 50167270 - 50167343
Alignment:
Q  28 ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 100  Q
    ||||||||||||||||| |||||||| ||||||  ||| |||||||||||||||   ||||||||||||||||||    
T  50167270 ggttacaagaaattagctttgacaagctcacaaataac-aaccctaatttctactaattttcccaatctcaccaa 50167343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 507
Target Start/End: Complemental strand, 26644450 - 26644381
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||||||||| |||||  ||||||||| |||| ||| | ||||||||||| ||||||||||| ||| ||||    
T  26644450 aaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaat 26644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 502
Target Start/End: Original strand, 41398764 - 41398809
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||| ||||| |||||||| || |||||||||||||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaag 41398809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 49918292 - 49918221
Alignment:
Q  148 ccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||| |||||||||||||| || | |||||||||| | |  ||||||||||||||||| |||||||||||    
T  49918292 ccaagaga-actctaatcaaaga-ccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 49918221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 30476516 - 30476614
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||| |||||| ||| | |||||||| || |||||| ||||||||||||||  |||||||||||||||||    
T  30476516 gagttcttacaaa-gagatacaaatgggttacaataaattatcttcaacaagttcataaagaacaa-ccctaatttctacctattttcccaatctcacca 30476613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 377; Significance: 0; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 10593355 - 10592845
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  10593355 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccttctcccaatctcaccaaga 10593256  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  10593255 cactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctagag-ttccccctttgattt 10593157  T
Q  203 cccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcg 301  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||| || |||||    
T  10593156 cccaagtctctctctcttccaactctctcttcaaatctgcacaagaacacttacatactagtcttcctctgttgaaatcgtgtcacgatttcccaaatcg 10593057  T
Q  302 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcca 400  Q
    ||||||||| ||||| |  || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  10593056 tgtcacgatctgcgtaccaccgaagaaacgaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgcca 10592957  T
Q  401 cgattttgcacccctacaacctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttga 500  Q
    |||||||||| |||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  10592956 cgattttgca-ccctgcaacctatctcacggcacccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 10592858  T
Q  501 agacaatctcaac 513  Q
    |||||||||||||    
T  10592857 agacaatctcaac 10592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 25078211 - 25077707
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25078211 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 25078112  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25078111 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 25078013  T
Q  209 tctctctctcttccaa-ctcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
      |||||||||||||| ||| | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25078012 --tctctctcttccaacctctcccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 25077915  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgatt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||| ||||| |    
T  25077914 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacga-t 25077816  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    |||||||||||||| |||||||||| |||||   ||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  25077815 ttgcacccctacaaccctagctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 25077716  T
Q  505 aatctcaac 513  Q
    || ||||||    
T  25077715 aaactcaac 25077707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 25136180 - 25135676
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25136180 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 25136081  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25136080 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 25135982  T
Q  209 tctctctctcttccaa-ctcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
      |||||||||||||| ||| | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25135981 --tctctctcttccaacctctcccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 25135884  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgatt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||| ||||| |    
T  25135883 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacga-t 25135785  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    |||||||||||||| |||||||||| |||||   ||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  25135784 ttgcacccctacaaccctagctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 25135685  T
Q  505 aatctcaac 513  Q
    || ||||||    
T  25135684 aaactcaac 25135676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 40380181 - 40379679
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40380181 ttacaaaagggatacaagaggttacaagaaattagtttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 40380082  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  40380081 atgattctctct--acaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 40379985  T
Q  209 tctctctctcttccaac-tcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||  |||||| || | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40379984 tctctctct--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 40379887  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgatt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| |    
T  40379886 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaat 40379787  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    ||||| |||| ||| |||||||||| |||||   |||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  40379786 ttgca-ccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac 40379688  T
Q  505 aatctcaac 513  Q
    |||||||||    
T  40379687 aatctcaac 40379679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 40382392 - 40381890
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  40382392 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaacttctacccctttcccaatctcaccaagacactca 40382293  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  40382292 atgattctctct--acaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 40382196  T
Q  209 tctctctctcttccaac-tcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||  |||||| || | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40382195 tctctctct--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 40382098  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgatt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| |    
T  40382097 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaat 40381998  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    ||||| |||| ||| |||||||||| |||||   |||||||||||||| ||||||||||| ||| |||||||||||||| || |||||||||||||||||    
T  40381997 ttgca-ccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagac 40381899  T
Q  505 aatctcaac 513  Q
    |||||||||    
T  40381898 aatctcaac 40381890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 16546721 - 16546217
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  16546721 ttacaaaagggatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcctaatctcaccaagacactc 16546622  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  16546621 aatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaa 16546525  T
Q  208 gtctctctctcttccaactccca--cttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgt 304  Q
    ||||||||||  ||||||  |    |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16546524 gtctctctct--tccaacctcttgccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgt 16546427  T
Q  305 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacga 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||    
T  16546426 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16546327  T
Q  404 ttttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
     |||||| |||| ||| |||||||||| |||||   |||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  16546326 atttgca-ccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 16546228  T
Q  503 acaatctcaac 513  Q
    |||||||||||    
T  16546227 acaatctcaac 16546217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 16544499 - 16543995
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    ||||||||||||||||| ||||||  ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16544499 ttacaaaagggatacaagaggttatgagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 16544400  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  16544399 aatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaa 16544303  T
Q  208 gtctctctctcttccaactccca--cttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgt 304  Q
    ||||||||||  ||||||  |    |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16544302 gtctctctct--tccaacctcttgccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgt 16544205  T
Q  305 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacga 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||    
T  16544204 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16544105  T
Q  404 ttttgcacccctacaacctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaaga 503  Q
     |||||||||    | ||||||||||||||||   |||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  16544104 atttgcaccctgtaaccctagctcacagcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaaga 16544005  T
Q  504 caatctcaac 513  Q
    ||||||||||    
T  16544004 caatctcaac 16543995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 513
Target Start/End: Original strand, 22536358 - 22536851
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22536358 aagagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 22536457  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgat 200  Q
    ||||||||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22536458 gacactcaatgattctctctg--cagggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgat 22536555  T
Q  201 ttcccaagtctctctctct--tccaactcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    |||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||                      
T  22536556 ttcccaagtctctctctctcttccaactctctcttcaaatctgcacaagaacactttatactagccttcctctgttgaaatc------------------ 22536637  T
Q  299 tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtg 397  Q
      |||||||||| || || |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||    
T  22536638 --gtgtcacgatctgtgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtg 22536735  T
Q  398 ccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaat 496  Q
    ||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||    
T  22536736 ccacgattttgca-ccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaat 22536834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 506
Target Start/End: Original strand, 29751228 - 29751715
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29751228 aagagttcttacaaaagggatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 29751327  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  29751328 agacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttga 29751427  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt--tatactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    |||||||||||||||||||||||||||| | |||||||  |||||||||||||||  |||||||||||||||||   ||||||||||||||||||||| |    
T  29751428 tttcccaagtctctctctcttccaactctc-cttcaaagatgcacaagaacactttatatactagccttcctctaaagcaatcgtgtcacgattttccaa 29751526  T
Q  298 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaatcgtg 397  Q
    ||||||||||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||                       
T  29751527 atcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgt------------------- 29751607  T
Q  398 ccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaat 496  Q
     |||||||| ||| |||| ||||||||||||| ||||| ||||||||||||  ||| ||||| || |||||| ||||||||||||||||| |||||||||    
T  29751608 -cacgatttggca-ccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagaccacaaat 29751705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 506
Target Start/End: Complemental strand, 29720464 - 29719974
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29720464 aagagttcttacaaaagggatacaaaaggttacaagaaattagattagacaagttcacaatgaactaaccctaatttctacccttttcccaatctcacca 29720365  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  29720364 agacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttga 29720265  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    |||||||||| ||||||||||||||||| | |||||||| |||||||||||||||  ||||  ||||||| ||| |  |||||||||||||||           
T  29720264 tttcccaagtttctctctcttccaactctc-cttcaaatttgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatt------- 29720173  T
Q  299 tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacaatttccca-aatcgt 396  Q
                 ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||||| ||||||    
T  29720172 -----------ggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgt 29720084  T
Q  397 gccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaa 495  Q
    | |||||||| ||| |||| ||  ||||||||| ||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||    
T  29720083 gtcacgatttggca-ccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 29719985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 3 - 506
Target Start/End: Original strand, 18441718 - 18442224
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  18441718 gagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaa-ccctaatttctaccctttttccaatctcaccaa 18441816  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    |||||||||||||| || ||   ||||||||||||||||||| | |||||||||||  ||||||||||||| | |||||||||| || | ||||||||||    
T  18441817 gacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttga 18441915  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||||||||| | |||||||| ||| ||| |  |||||||||||||||| ||       
T  18441916 tttcccaagtttctctctcttccaactctc-cttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt-ccagg 18442013  T
Q  299 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcg 395  Q
    |||||||||||||  ||||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||    |||||||||| |||||||| |||||    
T  18442014 tcgtgtcacgattggtgcgttcgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcg 18442113  T
Q  396 tgccacgattttgcacccctacaacctagctcacagcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaa 494  Q
    || |||||||| |||||| | ||| | ||||||| ||| |  |||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  18442114 tgtcacgatttggcaccc-tgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 18442212  T
Q  495 atttgaagacaa 506  Q
    ||||||||||||    
T  18442213 atttgaagacaa 18442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 3 - 506
Target Start/End: Original strand, 9789294 - 9789800
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| || |||||||||||||||| |||||||||||||    
T  9789294 gagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaa-ccttaatttctaccctttttccaatctcaccaa 9789392  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    |||||||||||||| || ||   ||||||||||||||||||| | |||||||||||  ||||||||||||| | |||||||||| || | ||||||||||    
T  9789393 gacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttga 9789491  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||||||||| | |||||||| ||| ||| |  ||||||||||||||||||        
T  9789492 tttcccaagtttctctctcttccaactctc-cttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattttcagg- 9789589  T
Q  299 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcg 395  Q
    ||||||||||| |  ||||| |||| |||| |||||||||||||||||| ||| |||||||||||||||||    |||||||||| |||||||| |||||    
T  9789590 tcgtgtcacgaatggtgcgttcgtcgcaagaaacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcg 9789689  T
Q  396 tgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaa 494  Q
    || |||||||| |||||| | ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  9789690 tgtcacgatttggcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 9789788  T
Q  495 atttgaagacaa 506  Q
    ||||||||||||    
T  9789789 atttgaagacaa 9789800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 29722624 - 29722332
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29722624 aagagttcttacaaaagggatacaaaaggttacaagaaattagattagacaagttcacaatgaactaaccctaatttctacccttttcccaatctcacca 29722525  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  29722524 agacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttga 29722425  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattt 292  Q
    |||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||  ||||  ||||||| ||| |  ||||||||||||||||    
T  29722424 tttcccaagtttctctcttttccaactctc-cttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 3 - 502
Target Start/End: Complemental strand, 26177980 - 26177479
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  26177980 gagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttctacccttttcc-aatctcaccaa 26177883  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    |||||||||||||| || ||   |||||||||| |||||||| | |||||||||||  ||||||||||||| | |||||||||| || | ||||||||||    
T  26177882 gacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttga 26177784  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    |||||||||| ||||||||||||||||| |  |||||| ||||| ||||||||||| | |||||||| ||| ||| |  |||||||||||||||| ||      
T  26177783 tttcccaagtttctctctcttccaactctc--ttcaaaatctgcgcaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt-ccag 26177687  T
Q  298 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atc 394  Q
     |||||||||||||  |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||| ||||||||  |||    
T  26177686 gtcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatc 26177587  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| |||||| | ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  26177586 gtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 26177488  T
Q  494 aatttgaag 502  Q
    |||||||||    
T  26177487 aatttgaag 26177479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 21 - 502
Target Start/End: Complemental strand, 26170853 - 26170370
Alignment:
Q  21 tacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctct 118  Q
    |||||||| ||||||||||||||| || ||||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||||||||| ||     
T  26170853 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcc-taatttctacccttttcc-aatctcaccaagacactcaatgattttca 26170756  T
Q  119 ctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctct 217  Q
    ||   |||||||||| |||||||| | |||||||||||  || |||||||||| | |||||||||| || | |||||||||||||||||||| |||||||    
T  26170755 ctcaccaaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaaga-ctctaaaccctagagttactccctttgatttcccaagtttctctct 26170657  T
Q  218 cttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatt--tg 313  Q
    |||||||||| |  |||||| ||||||||||||||||| | |||||||| ||| ||| |  |||||||||||||| | ||   |||||||||||||  ||    
T  26170656 cttccaactctc--ttcaaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatat-ccaggtcgtgtcacgattggtg 26170560  T
Q  314 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgattttgcacc 412  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||  |||||| ||||||||  |||||| |||||||| ||| |    
T  26170559 cgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggca-c 26170461  T
Q  413 cctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| ||| | ||||||| ||| | | ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  26170460 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaag 26170370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 3 - 502
Target Start/End: Complemental strand, 16409573 - 16409090
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  16409573 gagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttctaccctttttccaatctcaccaa 16409475  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    |||||||||||||| || ||   |||||||||| ||||||||  ||||||||||||  |||||||||||| || |||||||||| || | ||||||||||    
T  16409474 gacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaag-actctaaaccctagagttactccctttga 16409376  T
Q  200 tttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    |||||||||| ||||||||||||||||  | |||| ||||||||||||||||||||  ||||||||  ||| ||  |  |||||||||||||||          
T  16409375 tttcccaagtttctctctcttccaact--ctcttcaaaatctgcacaagaacacttaaatactagctctccactaataaaatcgtgtcacgatt------ 16409284  T
Q  298 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgt 396  Q
              ||   |||| |||||||| | ||||||||||||||||| ||| |||||||||||||||||    |||||||||| ||| | ||| |||||    
T  16409283 ---------gga---gcgtacgtcccaatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgt 16409196  T
Q  397 gccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaa 495  Q
    | ||| |||| ||| || | ||| | |||||||  || | | ||||||||||||||| ||||| ||||||||| ||||| |||||||| || ||||||||    
T  16409195 gtcacaatttggca-ccttgcaaaccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaa 16409097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 255 - 513
Target Start/End: Original strand, 43599058 - 43599317
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactt 354  Q
    ||||||||||||||||||  |||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||    
T  43599058 tatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatactt 43599156  T
Q  355 aacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc--gaaatcgtgtcacga 451  Q
    ||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| || |||  |||||||||||||||    
T  43599157 aacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcccccttgaaatcgtgtcacga 43599255  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
      ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  43599256 cgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 43599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 255 - 513
Target Start/End: Original strand, 43604550 - 43604809
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactt 354  Q
    ||||||||||||||||||  |||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||    
T  43604550 tatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatactt 43604648  T
Q  355 aacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc--gaaatcgtgtcacga 451  Q
    ||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| || |||  |||||||||||||||    
T  43604649 aacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcccccttgaaatcgtgtcacga 43604747  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
      ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  43604748 cgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 43604809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 255 - 513
Target Start/End: Original strand, 43610042 - 43610301
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactt 354  Q
    ||||||||||||||||||  |||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||    
T  43610042 tatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatactt 43610140  T
Q  355 aacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc--gaaatcgtgtcacga 451  Q
    ||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| || |||  |||||||||||||||    
T  43610141 aacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcccccttgaaatcgtgtcacga 43610239  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
      ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  43610240 cgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 43610301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 241 - 513
Target Start/End: Original strand, 27450134 - 27450408
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | ||||||||||||||||||  ||||||||| |||||||| || ||||||||||||||||||||| | ||||||| | ||||||||    
T  27450134 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 27450232  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-c 436  Q
    ||||||| ||||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| || ||      
T  27450233 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcccctt 27450331  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  27450332 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 27450408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 240 - 501
Target Start/End: Original strand, 24136207 - 24136470
Alignment:
Q  240 tgcacaagaacactttata--ctagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    |||||||||||||||||||  ||||| |||||||| | |||||||| |||||||| ||  ||||||||||||||||||| |||||||||| | |||||||    
T  24136207 tgcacaagaacactttatatactagctttcctctgatacaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagt 24136305  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagca-cc 435  Q
    |||||||||||||||||||||||||||||| |  |||||||||| ||||||||| |||||| |||||||| ||| |||| ||| ||||||||| ||| |     
T  24136306 ccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggca-ccctgcaaactagctcacggcatca 24136404  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    |||||| |||||||||| ||||| ||||||||| |||||  |||||||||| ||||||||||||||    
T  24136405 cgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaa 24136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 241 - 513
Target Start/End: Original strand, 27445291 - 27445565
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | ||||||||||||||||||  ||||||||| |||||||| || ||||||||||||||||||||| | ||||||| | ||||||||    
T  27445291 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 27445389  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-c 436  Q
    ||||||| ||||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| || ||      
T  27445390 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcccctt 27445488  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||| | ||||||||||||||| |||| |||||    
T  27445489 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaatatcaac 27445565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 241 - 452
Target Start/End: Original strand, 43592597 - 43592811
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | |||||||||||||||| |  |||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||    
T  43592597 gcacaagaacacaatatatactagccttcctccgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 43592695  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc- 436  Q
    ||||||| ||||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| || |||     
T  43592696 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggccccct 43592794  T
Q  437 -gaaatcgtgtcacgat 452  Q
     ||||||||||||||||    
T  43592795 tgaaatcgtgtcacgat 43592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 337 - 506
Target Start/End: Complemental strand, 29722332 - 29722161
Alignment:
Q  337 tccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacaatttccca-aatcgtgccacgattttgcacccctacaacctagctcacagcac 434  Q
    ||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||||| ||||||| |||||||| |||||  | ||  ||||||||||||||    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcacca-tgcagactagctcacagcac 29722234  T
Q  435 c-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaa 506  Q
    | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  29722233 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 29722161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 1456914 - 1456639
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| ||||||||   | ||||||| |||||||| || | | ||||||||||||||| || | ||||||| | ||| |||    
T  1456914 gcacaagaacacaatatatactagtcttcctctaaagaaatcgtgccacgatttcccaagaccgtgtcacgatttgcatctgacccaaggta-gacaagt 1456816  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc 436  Q
    |||||||| ||||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || |  || ||||||||| || ||     
T  1456815 ccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgtaaactagctcacggcccct 1456717  T
Q  437 -gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  1456716 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 1456639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 25412858 - 25412634
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||       
T  25412858 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttcccaatctcaccaa 25412761  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| |||||||||||||| | | |      
T  25412760 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaatgttgcct 25412663  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||||| |||||||||||    
T  25412662 cctttgatttcccaagtttctctctcttc 25412634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 30631764 - 30631947
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaa-tcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||||||||||||||   |||||||||| |||||||||| ||||| |||||||| ||  || | ||| || ||||||    
T  30631764 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcc-tgcaaactggctcac 30631862  T
Q  430 agcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     ||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  30631863 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 30631947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 235 - 386
Target Start/End: Original strand, 35388016 - 35388169
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||||||||||||| |  |||||||||||||||| ||  ||||||||||||||||  ||| |||||||||| | |    
T  35388016 aaatctgcacaagaacacttaaatactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtacgtcccaaggtatg 35388114  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt 386  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  35388115 accagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 13343149 - 13342933
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------ga 102  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||       ||    
T  13343149 aaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaatgaacaaga 13343051  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||| ||| ||||||||||||||| | || |||||||||    
T  13343050 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcagaga-ccctaaaccctaaagttgcttcctttgatt 13342953  T
Q  202 tcccaagtctctctctcttc 221  Q
    |||||||| |||||||||||    
T  13342952 tcccaagtttctctctcttc 13342933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 15045096 - 15045278
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  ||||||||| |||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| || ||||||    
T  15045096 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactggctcac 15045194  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     ||| |  ||||||||||||||| ||||||||||||||| ||||| ||||||||||| || |||||||||||| |||| |||||    
T  15045195 ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaatatcaac 15045278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 28 - 255
Target Start/End: Complemental strand, 30182661 - 30182428
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcaccaa-------gacactcaatgattctct 118  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||       |||||||||||||| ||     
T  30182661 ggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttca 30182563  T
Q  119 ctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctct 217  Q
    ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||| |||||||| | || ||||||||||||||||| |||||||    
T  30182562 ctcaccaaggtgtttgcaatgtttcccaacccaagaga-actctaatcaaaga-ccctaatccctaaagttgcttcctttgatttcccaagtttctctct 30182465  T
Q  218 cttccaactcccacttcaaatctgcacaagaacacttt 255  Q
    |||| | ||| || |  ||||||||| |||||||||||    
T  30182464 cttcaagctctcattcaaaatctgca-aagaacacttt 30182428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 36074122 - 36074340
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt----cccaatctcaccaa------- 100  Q
    |||| |||||||||| |||||||||||||||||| ||||||||| ||| |||||| |||||||||||||||||||    ||||||||||||||           
T  36074122 aaagagatacaaaagagttacaagaaattagctttgacaagttcgcaaagaacaa-ccctaatttctacccttttttttcccaatctcaccaatgaacaa 36074220  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    |||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || |||||||    
T  36074221 gacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttga 36074318  T
Q  200 tttcccaagtctctctctcttc 221  Q
    |||||||||| |||||||||||    
T  36074319 tttcccaagtttctctctcttc 36074340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 235 - 413
Target Start/End: Original strand, 38219752 - 38219928
Alignment:
Q  235 aaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacga 332  Q
    |||||||||||||||||||    ||||||||||||||| |  ||| |||||||||||| || ||||||||||||||| |  ||| |||| ||||| ||||    
T  38219752 aaatctgcacaagaacact----actagccttcctctgataaaattgtgtcacgattt-ccaaatcgtgtcacgattggaacgtacgtcacaaggtacga 38219846  T
Q  333 ccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcaccc 413  Q
    ||||||||||||| ||| ||||||| ||||||||| |  |||||||||||||||||||| |||||| |||||||| ||||||    
T  38219847 ccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccc 38219928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 506
Target Start/End: Original strand, 29752266 - 29752381
Alignment:
Q  391 aatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccatac 489  Q
    |||||||||||||||| |||||| | ||||||||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||    
T  29752266 aatcgtgccacgatttggcaccc-tgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagac 29752364  T
Q  490 cacaaatttgaagacaa 506  Q
    |||||||||||||||||    
T  29752365 cacaaatttgaagacaa 29752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 297 - 502
Target Start/End: Complemental strand, 16407862 - 16407654
Alignment:
Q  297 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-at 393  Q
    ||||||||||||||| |  ||| |||||||||| |||||| |||||||||| ||| |||||||||||||||||    |||||||||| ||| | ||| ||    
T  16407862 aatcgtgtcacgattggagcgtacgtcccaaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagat 16407763  T
Q  394 cgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccac 492  Q
    |||| |||||||| |||||| | ||| | ||||||| ||| | | |||||||||||||||  |||| ||||||||| ||||| ||||||||||| |||||    
T  16407762 cgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccac 16407664  T
Q  493 aaatttgaag 502  Q
    ||||||||||    
T  16407663 aaatttgaag 16407654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 337 - 513
Target Start/End: Complemental strand, 29402728 - 29402551
Alignment:
Q  337 tccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc-ac 434  Q
    |||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| ||||||||  || ||    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactagctcatggccac 29402630  T
Q  435 ccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
      ||||||||| |||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  29402629 ttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 29402551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 28807260 - 28807083
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| | ||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||    ||| | ||||||    
T  28807260 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac 28807161  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |  | |||||||||||||  |||||||||| ||| ||| | ||||||||||| |||| |||||||||| ||||    
T  28807160 ggcatctcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 332 - 502
Target Start/End: Complemental strand, 37556308 - 37556137
Alignment:
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||  | ||   | ||| | ||||||     
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37556209  T
Q  431 gcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| |  | |||||||||||||  | |||||||||||| ||| | ||||||||||| |||||||||||||||    
T  37556208 gcatctcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaag 37556137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 13488301 - 13488075
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| | ||||||||||| |||||| ||||||||||||||| |||||||||||| ||||    
T  13488301 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatcttacca 13488204  T
Q  100 a-------gacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    |       |||||||||| ||| || ||   | ||||||||| | |||||||| ||||||||||| |||||||||||||| |||| |||||||||| | |    
T  13488203 atgaacaagacactcaataattttcactcacccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttac 13488106  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  13488105 ctcctttgatttcccaagtttctctctcttc 13488075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 39468619 - 39468845
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| |||||||||||||||      
T  39468619 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcacta 39468716  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| |||||||| |||| ||||| |||||||||| | |    
T  39468717 atgaacaagacactcaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagaga-actctaatgaaag-accctcaaccctaaagttac 39468814  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  39468815 ctcctttgatttcccaagtttctctctcttc 39468845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 406
Target Start/End: Original strand, 31180573 - 31180741
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  ||||||||| |||||||| || | ||| |||||||||||||||| | |||||||   |||||||    
T  31180573 gcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcatgtcacgatttgcgtctgacccaaggtt-gaccagt 31180671  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattt 406  Q
    ||||||||  ||||||||||||| |||| ||   |||||||||| ||||||||| |||||||||||||||    
T  31180672 ccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgattt 31180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 13239849 - 13239618
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||||| |||||||||||||||||| | ||||||||||| ||| |||||||||||||||||  |||| ||||||||||      
T  13239849 gagttcttacaaa-gagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaa-aaaccctaatttctaccattttttccaatctcacca 13239752  T
Q  98 -----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
         ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||| ||||| | |     
T  13239751 atgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccataaagttacc 13239654  T
Q  192 ccctttgatttcccaagtctctctctcttccaactc 227  Q
     |||||||||| | |||| ||||||||||| |||||    
T  13239653 tcctttgattttctaagtttctctctcttcaaactc 13239618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 32636924 - 32636698
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| |||| |||||||||||| |||||||||||||||    
T  32636924 aagagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccataatttctacccattttcccaatctcac 32636827  T
Q  98 c-------aagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct 188  Q
    |       |||||||||||||||| || ||    |||||||||| | ||||||  | |||||||||| ||||||||||||| ||||| |||||||||| |    
T  32636826 caatgaataagacactcaatgattttcactcacccaaggtgtttacaatgtttcactacccaagaga-actctaatcaaag-acccttaaccctaaagtt 32636729  T
Q  189 tctccctttgatttcccaagtctctctctct 219  Q
     |  ||||||||||| ||||| |||||||||    
T  32636728 acctcctttgatttctcaagtttctctctct 32636698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 502
Target Start/End: Complemental strand, 37561130 - 37560959
Alignment:
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||||||| ||||||||| |||||||||||||||  | ||   | ||| | ||||||     
T  37561130 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37561031  T
Q  431 gcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| |  | |||||||||||||    |||||||||||| ||| | ||||||||||| |||||||||||||||    
T  37561030 gcatctcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaag 37560959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 30683010 - 30683216
Alignment:
Q  20 atacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcac-------caagacactcaa 109  Q
    |||||||||| ||||||||||||||||| | ||||||||||| ||||    |||||||||||||||||| |||||||||||       ||||||||||||    
T  30683010 atacaaaagggttacaagaaattagcttcaacaagttcacaaagaac----cctaatttctaccctttttcccaatctcacaaatgaacaagacactcaa 30683105  T
Q  110 tgattctctctttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||| || ||   |||||||||| | ||||||  |||||||||||| |||||||||||||| |||| |||||||||  | |  ||| ||||||||||||    
T  30683106 tgattttcactcaccaaggtgtttacaatgtttcgcaacccaagaga-actctaatcaaaga-ccctcaaccctaaaattacctcctctgatttcccaag 30683203  T
Q  209 tctctctctcttc 221  Q
    | |||||||||||    
T  30683204 tttctctctcttc 30683216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 13695771 - 13695859
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    |||| ||||||||||| ||||||||||||||||| | |||| |||||| |||||||||||||||| |||||||||||||||||| ||||    
T  13695771 aaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgtacccttttcccaatctctccaa 13695859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 31183069 - 31182857
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac---- 97  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||  ||||  |||||| |||| || |||||||||||||| ||| ||||||||||        
T  31183069 gagttcttacaaa-gggatacaaatggttacaagaaattaacttaaacaaactcacaaagaac-aatcctaatttctacccattttccaatctcacaaat 31182972  T
Q  98 ---caagacactcaatgattctctctttac-aaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
       ||||||||||||||||| || ||   | ||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |      
T  31182971 gaacaagacactcaatgattttcactcacctaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacct 31182874  T
Q  193 cctttgatttcccaagt 209  Q
    |||||||||||||||||    
T  31182873 cctttgatttcccaagt 31182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 2785778 - 2785955
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| | ||||||    
T  2785778 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 2785877  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |    |||||||||||||  | |||||| | ||| ||| | ||||||||||| ||||||||||||||| ||||    
T  2785878 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 2785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 15465000 - 15465112
Alignment:
Q  390 aaatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccata 488  Q
    |||||||| |||||||| |||||| | ||| | ||||||| ||| | | ||||||||||||||||||||| ||||||||| ||||| |||||||| || |    
T  15465000 aaatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcaga 15465098  T
Q  489 ccacaaatttgaag 502  Q
    ||||||||||||||    
T  15465099 ccacaaatttgaag 15465112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 28750725 - 28750984
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    |||||||||||||| | ||||||| || ||||| ||||||| ||| | ||| |||| || |||||| ||||||||||||||| |||||||||||||||||    
T  28750725 gagttcttacaaaaag-atacaaatgggttacaggaaattaacttcaacaatttcataaagaacaa-ccctaatttctacccattttcccaatctcacca 28750822  T
Q  100 a-------gacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    |       |||||||||||||| || ||   | ||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |    
T  28750823 atgaacaagacactcaatgattttcactcacccaaggtgttttcaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttac 28750920  T
Q  191 tccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt 254  Q
      ||||||||||||||||| ||||||||||| | ||| |  |  ||||||||| ||||||||||    
T  28750921 ctcctttgatttcccaagtttctctctcttcaagctctctttcaaaatctgcataagaacactt 28750984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 33768587 - 33768764
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| | ||||||    
T  33768587 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33768686  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |    |||||||||||||  | |||||| | ||| ||| | ||||||||||| ||||||||||||||| ||||    
T  33768687 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 33791719 - 33791896
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| | ||||||    
T  33791719 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33791818  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |    |||||||||||||  | |||||| | ||| ||| | ||||||||||| ||||||||||||||| ||||    
T  33791819 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 42428500 - 42428726
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| ||| ||||| |||||||||||| |||||||||||||||      
T  42428500 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaa-aaaccataatttctacccattttcccaatctcacca 42428597  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct-t 189  Q
         ||||||||||||||||| || ||    |||||||||| | || |||  |||||||||||| ||||||||||||| ||| | |||||||||| | |    
T  42428598 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagaga-actctaatcaaag-accttcaaccctaaagttat 42428695  T
Q  190 ctccctttgatttcccaagtctctctctcttc 221  Q
    || ||||||||||||||||| |||||||||||    
T  42428696 ct-cctttgatttcccaagtttctctctcttc 42428726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 502
Target Start/End: Complemental strand, 9352972 - 9352820
Alignment:
Q  351 acttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtca 448  Q
    ||||||| ||||||||| |  |||||||||| ||||| || ||||||||||||||||  ||||| | ||| | ||||||| |||   | |||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccc-tgcaaaccagctcacggcattacaaaatcgtgtca 9352874  T
Q  449 cgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||| ||| ||||| ||||| ||||| |||||||| || |||||||||||||||    
T  9352873 cgatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaag 9352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 213563 - 213465
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||| || ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  213563 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcacca 213466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 36931920 - 36931856
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||| |||||| ||||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  36931920 aaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 36931856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 16452178 - 16451965
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| | |||| ||| || ||||||||  |||||||||||| |||| ||||||||| ||    
T  16452178 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaact-taatttctacccatttttccaatctcatca 16452081  T
Q  100 a-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |       |||||||||||||| || |||  |||||||||| | |||||| | ||||||||||| ||||||||||||| | ||| |||||||||| | |     
T  16452080 atgaacaagacactcaatgattgtcacttaccaaggtgtttacaatgtttccgaacccaagaga-actctaatcaaag-atcctcaaccctaaagttacc 16451983  T
Q  192 ccctttgatttcccaagt 209  Q
     |||||||||||||||||    
T  16451982 tcctttgatttcccaagt 16451965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 533867 - 533641
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||| |||||||||| | |||| |||||| || ||| ||||||||||||||| |||||||||||||||      
T  533867 gagttcttacaaa-gagatacaaatgggttacaaaaaattagcttcaacaagctcacaaagaccaa-ccctaatttctacccattttcccaatctcacca 533770  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         |||||||| |||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||  |||||||||| | |    
T  533769 atgaacaagacacgcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-acccccaaccctaaagttac 533672  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||| | |||||||||||    
T  533671 ctcctttgatttcccaaatttctctctcttc 533641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 513
Target Start/End: Original strand, 31180773 - 31180829
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 31180829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 33831778 - 33831588
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| |||| ||||||||||      
T  33831778 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttttccaatctcacaa 33831681  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctaaa 185  Q
          |||||||||||||||| || ||    |||||||||| | ||||||| |||||||||||| ||||||||||||| ||||| |||||||||    
T  33831680 atgaataagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaag-acccttaaccctaaa 33831588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 37439239 - 37439161
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc 81  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  37439239 gagttcttacaaa-gagatacaaaagagttacaagaaattaactttgacaagttcacaaagaac-aaccctaatttctacc 37439161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 40147359 - 40147261
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||| | |||||| ||||||||||||||| |||||||||||||||||    
T  40147359 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaa-ccctaatttctacccattttcccaatctcacca 40147262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 513
Target Start/End: Original strand, 43592797 - 43592853
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 43592853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 14520796 - 14520846
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 28278389 - 28278316
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  ||||| |||||| |||| |||| |||||||||||| ||||||||||||||||||    
T  28278389 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccataatttctacccattttcccaatctcaccaa 28278316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 38747078 - 38747009
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 96  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||||    
T  38747078 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctca 38747009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 538123 - 537901
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| || | |||| |||||||||||| |||||||||||||||      
T  538123 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagagc-aaccttaatttctacccattttcccaatctcacta 538026  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         |||||||| |||||||| || ||    |||||||||| | ||||||  ||| |||||||| ||||||||||||| ||||| |||||||||| | |    
T  538025 atgaacaagacacgcaatgattttcactcacccaaggtgtttacgatgtttcccaagccaagaga-actctaatcaaag-accctcaaccctaaagttac 537928  T
Q  191 tccctttgatttcccaagtctctctct 217  Q
      |||||||||| |||||| |||||||    
T  537927 ctcctttgattttccaagtttctctct 537901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 9049412 - 9049506
Alignment:
Q  3 gagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 97  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||  ||||| ||||||  ||||||| |||||||||| | ||||||||| |||||    
T  9049412 gagttcttacaaa-gagatacaaaatggttacaagaaattagcttcaacaagctcacaa-aaacaaacactaatttctatcattttcccaaactcac 9049506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 42426305 - 42426527
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || || |||||||||||||| | ||| ||||||| |||||| ||||||||||||||| ||||| |||||||||||    
T  42426305 gagttcttacaaa-gagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaacaa-ccctaatttctacccattttctcaatctcacca 42426402  T
Q  100 a-------gacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    |       |||||||||| ||| || ||   | ||||||||| | |||||| | || | |||||| |||||||||||||| |||| |||||||||| | |    
T  42426403 atgaacaagacactcaataattttcactcacccaaggtgtttacaatgtttcccaatctaagaga-actctaatcaaaga-ccctcaaccctaaagttac 42426500  T
Q  191 tccctttgatttcccaagtctctctct 217  Q
      ||||||||||||||||| |||||||    
T  42426501 ctcctttgatttcccaagtttctctct 42426527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 16407949 - 16407886
Alignment:
Q  190 ctccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt 254  Q
    ||||||||||||| |||||| ||||||||||||||||  | |||| ||||||||||||||| ||||    
T  16407949 ctccctttgattttccaagtttctctctcttccaact--ctcttcaaaatctgcacaagaatactt 16407886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 27637682 - 27637781
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  |||||||||||||||| || | |||| ||| || |||||| ||||||||||||||| ||||| ||||||||||    
T  27637682 gagttcttacaaa-gagatacaaaatgggttacaagaaattagtttaaacaagctcataaagaacaa-ccctaatttctacccattttctcaatctcacc 27637779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 8566016 - 8566111
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||| | |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| ||||| |||||||| ||||| |||||||||    
T  8566016 gagttcttacaga-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaagttctacccattttctcaatctcac 8566111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 27015583 - 27015531
Alignment:
Q  48 acaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||| |||||| ||||||||||||||  ||||||||||||||||||    
T  27015583 acaagttcacaaagaacaa-ccctaatttctacctattttcccaatctcaccaa 27015531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 6592418 - 6592920
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6592418 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccatttcccaatctcaccaagacactca 6592517  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6592518 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 6592614  T
Q  209 tctctctctcttccaac-tcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||  |||||| || | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6592615 tctctctct--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 6592712  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgatt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||||| |    
T  6592713 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-t 6592811  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    |||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  6592812 ttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 6592911  T
Q  505 aatctcaac 513  Q
    |||||||||    
T  6592912 aatctcaac 6592920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 6594636 - 6595136
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6594636 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 6594735  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6594736 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 6594832  T
Q  209 tctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcac 307  Q
    |||||||||  |||||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  6594833 tctctctct--tccaac-ctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcac 6594929  T
Q  308 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgattt 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||||| ||    
T  6594930 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tt 6595028  T
Q  407 tgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagaca 505  Q
    ||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  6595029 tgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagaca 6595128  T
Q  506 atctcaac 513  Q
    ||||||||    
T  6595129 atctcaac 6595136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 18392274 - 18392779
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18392274 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 18392373  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  18392374 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 18392470  T
Q  209 tctctctctcttccaactcc----cacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtg 303  Q
    |||||||||  |||||||||    | || ||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  18392471 tctctctct--tccaactcctttactctccaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtg 18392568  T
Q  304 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||    
T  18392569 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacg 18392668  T
Q  403 attttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    | |||||| |||| ||| |||||||||| |||||   |||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  18392669 aatttgca-ccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaa 18392767  T
Q  502 gacaatctcaac 513  Q
    ||||||||||||    
T  18392768 gacaatctcaac 18392779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 20343994 - 20343501
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20343994 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 20343895  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||     
T  20343894 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattc 20343795  T
Q  203 cccaagtctctctctcttccaa--ctcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    ||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||                       
T  20343794 cccaagtctctctctcttccaaaactctctcttcaaatctgcacaagaacactttatactagtcttcctctgttgaaatcg------------------- 20343714  T
Q  301 gtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgcc 399  Q
     ||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |    
T  20343713 -tgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgac 20343615  T
Q  400 acgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
    |||||||||||  ||  ||||||||||||| ||| ||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||| |||||||||||    
T  20343614 acgattttgca-tccggcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaattt 20343516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 30 - 513
Target Start/End: Original strand, 1562103 - 1562586
Alignment:
Q  30 ttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggt 129  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1562103 ttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct--acaaggt 1562200  T
Q  130 gtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttccaactccc 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| |    
T  1562201 gtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgattccccaagtctctctctcttccaactctc 1562299  T
Q  230 ac-ttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagg 327  Q
     | ||||||||||||||||||||| | | |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1562300 tccttcaaatctgcacaagaacacataaatactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcacaagg 1562399  T
Q  328 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt-cccaaatcgtgccacgattttgcacccctacaacctagct 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| ||||||||   ||||  | |||  |       
T  1562400 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgatttaaaacccaaaaaacaaaaaa 1562499  T
Q  427 cacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |    || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  1562500 aaagaaacacgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 1562586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 506
Target Start/End: Complemental strand, 24789941 - 24789435
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  24789941 aagagtttttacaaaagggatacaaaatgttacaagaaattagctttgacaagttcacaatgaacaaaccctaatttttacccttttcccaatcttacca 24789842  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  24789841 agacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttga 24789742  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt--tatactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    ||||||||||||||  ||||||||||  |  |||||||  |||||||||||||||  ||||||||||||||||||  ||||||||||||||| ||||| |    
T  24789741 tttcccaagtctct--ctcttccaacctctccttcaaagatgcacaagaacactttatatactagccttcctctgaagcaatcgtgtcacga-tttccaa 24789645  T
Q  298 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgt 396  Q
    ||||||||| ||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  24789644 atcgtgtcaagatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgt 24789545  T
Q  397 gccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaa 495  Q
    |||||||||| ||| |||| ||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||    
T  24789544 gccacgatttggca-ccctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 24789446  T
Q  496 tttgaagacaa 506  Q
    |||||||||||    
T  24789445 tttgaagacaa 24789435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 9 - 413
Target Start/End: Original strand, 18388838 - 18389243
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18388838 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 18388937  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  18388938 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 18389034  T
Q  209 tctctctctcttccaactcc----cacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtg 303  Q
    ||||  ||||||||||||||    | || ||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  18389035 tctc--tctcttccaactcctttactctccaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtg 18389132  T
Q  304 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||    
T  18389133 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacg 18389232  T
Q  403 attttgcaccc 413  Q
    | |||||||||    
T  18389233 aatttgcaccc 18389243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 17 - 513
Target Start/End: Original strand, 32060410 - 32060887
Alignment:
Q  17 gggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattct 116  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32060410 gggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattct 32060509  T
Q  117 ctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||  ||||||    
T  32060510 ctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctt-accctttgatttcccaag--tctctc 32060606  T
Q  217 tcttccaactcc--cacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg 313  Q
    |||||||||  |  | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||                    ||||||    
T  32060607 tcttccaacctcttcccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcac--------------------gatttg 32060686  T
Q  314 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgccacgattttgcacc 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||||| ||||||||    
T  32060687 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacga-tttgcacc 32060785  T
Q  413 cctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctca 511  Q
    ||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  32060786 cctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctca 32060885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 3 - 502
Target Start/End: Original strand, 43504224 - 43504708
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43504224 gagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttctacccttttcccaatctcacca 43504322  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttg 198  Q
    |||||||| |||||| ||||| | |||||||||||||||||||  ||| ||||||||  |||||||||||| || |||||||||| || |||||||||||    
T  43504323 agacactcgatgattttctctcttcaaggtgtttcccatgtttcccaagccaagagaagctctaatcaaag-actctaaaccctagagtttctccctttg 43504421  T
Q  199 atttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    ||||||||||| ||||||||||||||| ||  ||||||||||||||| ||||||||  ||||||||| ||| ||| |  |||||||||||||||          
T  43504422 atttcccaagtttctctctcttccaac-ccttcttcaaatctgcacaggaacacttaaatactagccctccactgataaaatcgtgtcacgatt------ 43504514  T
Q  298 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgt 396  Q
                  ||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||| ||||||||  |||||    
T  43504515 ------------ggtgcatctgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgt 43504602  T
Q  397 gccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaa 495  Q
    | |||||||| ||| |||| ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||    
T  43504603 gtcacgatttggca-ccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 43504701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 3 - 502
Target Start/End: Complemental strand, 39731467 - 39730946
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagct-tgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  39731467 gagttcttacaaaagagatacaaaagagttacaagaaattagatctgacaagttcacaaagaacaa-ccctaatttctaccctttttccaatctcaccaa 39731369  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    |||||||||||||| || ||   |||||||||| | ||||||  ||||||||||||  |||||||||||| ||||||||||||| || | ||||||||||    
T  39731368 gacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaag-accctaaaccctagagttactccctttga 39731270  T
Q  200 tttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttc--- 294  Q
    |||||||||| ||||||||||||||||  | |||| ||||||||||||||||||||  |||||||||||||  || |  ||||||||||||||||||       
T  39731269 tttcccaagtttctctctcttccaact--ctcttcaaaatctgcacaagaacacttaaatactagccttccattgataaaatcgtgtcacgattttcaga 39731172  T
Q  295 --------------cca-atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 377  Q
                  ||| ||||||||||||||  | ||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||    
T  39731171 tcgtgtcacgatttccagatcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtg 39731072  T
Q  378 tcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttcc 475  Q
    |||| ||| | ||| |||||| |||||||| ||| |||| ||| | ||||||| ||| | | ||||||||||||||| ||||| ||||||||| |||||     
T  39731071 tcacgattcctcaagatcgtgtcacgatttggca-ccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttct 39730973  T
Q  476 ctgttcttccataccacaaatttgaag 502  Q
    ||||||||||| |||||||||||||||    
T  39730972 ctgttcttccagaccacaaatttgaag 39730946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 232 - 513
Target Start/End: Original strand, 2058321 - 2058603
Alignment:
Q  232 ttcaaatctgcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaa 329  Q
    |||||||||||||||||||||  | ||||||||||||||||||  ||||||||| |||||||| ||  ||||||||||||||||||| |  ||||||| |    
T  2058321 ttcaaatctgcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggta 2058419  T
Q  330 cgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctca 428  Q
     ||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||    
T  2058420 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctca 2058518  T
Q  429 cagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | |||||  ||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  2058519 cggcacctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 2058603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 3 - 474
Target Start/End: Original strand, 25767030 - 25767505
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttc-ccaatctcac- 97  Q
    |||||||| |||||| |||||||||||  ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  |||||||||      
T  25767030 gagttctt-caaaagagatacaaaaggggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttccaatctcaat 25767127  T
Q  98 ---caagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccc 194  Q
       ||||||||||||||||| || ||   |||||||||| | |||||| | |   |||||| |||||||||||||| |||||||||||| || | |||||    
T  25767128 gaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttccca---aagagaaactctaatcaaaga-ccctaaaccctagagttgctccc 25767223  T
Q  195 tttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattt 292  Q
    ||||||||| ||||| |||||||||| || ||| | |||| ||||||||||||||||||||  ||||||| |||||  || |  ||||||||||||| ||    
T  25767224 tttgatttctcaagtttctctctctt-cagctctc-cttcaaaatctgcacaagaacacttaaatactagtcttccattgataaaatcgtgtcacga-tt 25767320  T
Q  293 tcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc- 389  Q
    ||| | |||||||||||||  | ||| |||| ||||| |||||| |||||||||   || ||||||||||||||||| |  |||||||||| |||||||     
T  25767321 tccaagtcgtgtcacgattggtacgtacgtcacaaggcacgacctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttccca 25767420  T
Q  390 aaatcgtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttc 474  Q
    |||||||| |||||||| ||| |||| ||| | ||||||| ||| | ||||||||||||||||| ||||| | ||||||| |||||    
T  25767421 aaatcgtgtcacgatttggca-ccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttc 25767505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 21646360 - 21646630
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||||||||||||| |  |||||||||||||||| ||  |||||| |||||||||  ||| |||||||||| | |    
T  21646360 aaatctgcacaagaacacttaaatactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtggcacgatttgaacgtacgtcccaaggtatg 21646458  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||| ||||||||||||||||||||||||||||| |  |||||||||| |||| |||| |||||| |||||||| |||||| | ||| | |||||||     
T  21646459 accagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccc-tgcaaaccagctcacg 21646557  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | ||||||||||||||||| ||||| | ||||||| ||||| ||||||||||| |||||||||||||||    
T  21646558 gcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 296 - 513
Target Start/End: Original strand, 21640204 - 21640422
Alignment:
Q  296 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atc 394  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| |||||||||||   |||||||||| ||||||||| |||    
T  21640204 caatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 21640303  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| ||   ||| ||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  21640304 gtgtcacgatttggc-gtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccaca 21640402  T
Q  494 aatttgaagacaatctcaac 513  Q
    ||||||||| |||| |||||    
T  21640403 aatttgaagccaatatcaac 21640422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 296 - 513
Target Start/End: Complemental strand, 20357247 - 20357029
Alignment:
Q  296 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atc 394  Q
    |||||||| ||||||||||||| | |||||||   |||| |||||||||||||||||||||||||||||||||   ||| |||||| ||||||||| |||    
T  20357247 caatcgtgccacgatttgcgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatc 20357148  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    |||||||||||| ||  || | ||| ||||||||| |||||  |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  20357147 gtgccacgatttggcgtcc-tgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccaca 20357049  T
Q  494 aatttgaagacaatctcaac 513  Q
    ||||||||| |||| |||||    
T  20357048 aatttgaagccaatatcaac 20357029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 233 - 468
Target Start/End: Complemental strand, 1533187 - 1532950
Alignment:
Q  233 tcaaatctgcacaagaacactttata--ctagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaac 330  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||  ||||||||| |||||||| ||  |||||||||||||||| ||  ||||||||| |     
T  1533187 tcaaatctgtacaagaacactatatatactagccttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgtgtatgtcccaaggtat 1533089  T
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |||||| |||||||| ||| |||| ||| ||||||||     
T  1533088 aaccagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggca-ccctgcaaactagctcat 1532990  T
Q  430 agcacc-cgaaatcgtgtcacgataccaaaatcgtgtcac 468  Q
     ||||| | ||||| ||||||||| ||||| |||||||||    
T  1532989 ggcacctcaaaatcatgtcacgatgccaaattcgtgtcac 1532950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 255 - 513
Target Start/End: Original strand, 12406597 - 12406856
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttcccaa-tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatact 353  Q
    |||||||| |||||||||  | ||||||| |||||||| ||||| ||||||||||||||||  | | ||||||| | ||| |||||||||||  ||||||    
T  12406597 tatactagtcttcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatact 12406695  T
Q  354 taacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacag-cacccgaaatcgtgtcacga 451  Q
    |||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   | | ||| ||||||||| | |||  |||||||||||||||    
T  12406696 taacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcttgcaaactagctcacggccacttgaaatcgtgtcacga 12406794  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  12406795 tgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 12406856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 241 - 513
Target Start/End: Original strand, 4873445 - 4873720
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| || | |||||||||||||||||  | | ||||||||| ||| |||    
T  4873445 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggaa-gacaagt 4873543  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacag-cacc 435  Q
    ||||||||  |||||||||||||||||||||   || ||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||| || || | |||     
T  4873544 ccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactatcttacggccact 4873642  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  4873643 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 4873720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 3 - 291
Target Start/End: Complemental strand, 48408902 - 48408605
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcacc 98  Q
    ||||| || |||||| |||||||||||  ||||||||||||||||| |||||||| |||| |||||| |  |||||||||||||||| ||||||||||||    
T  48408902 gagttatttcaaaagagatacaaaaggggttacaagaaattagctttgacaagtttacaaagaacaa-cattaatttctaccctttttcccaatctcacc 48408804  T
Q  99 aa-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    ||       |||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| || | |    
T  48408803 aatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgc 48408705  T
Q  191 tccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacg 288  Q
    ||||||||||||||||||| |||||||||||   | | | |||| ||||||||||||||||||||  ||||||| ||||| ||| |  ||||||||||||    
T  48408704 tccctttgatttcccaagtttctctctcttc---cgctctcttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacg 48408608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 18409116 - 18409386
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||| ||||||||| | |||||| ||||| ||| |  |||||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||    
T  18409116 aaatctgcacgagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacg 18409214  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||| ||| ||||||| ||||||||| |  |||||||||| ||||| ||| |||||| || ||||| |||||| | ||| | |||||||     
T  18409215 accagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccc-tgcaaaccagctcacg 18409313  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||| | ||||||||||||||| ||||| |||||| || ||||| ||||||||||| | |||||||||||||    
T  18409314 gcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaag 18409386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 502
Target Start/End: Complemental strand, 24024093 - 24023831
Alignment:
Q  241 gcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtcc 339  Q
    ||||||||||||| |||||||| ||||| |||  | ||||||| |||||||| || | ||||||||||||| |||  | ||||| |||   |||||||||    
T  24024093 gcacaagaacactatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagtcc 24023995  T
Q  340 ttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacag-cacccg 437  Q
    ||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||| | | |||  |    
T  24023994 ttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctctctgccacttg 24023896  T
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||| |||||| ||| ||||||||||| ||||| ||||||||||| |||||||||||||||    
T  24023895 aaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 35854012 - 35853787
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||      
T  35854012 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctcacca 35853915  T
Q  98 -----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
         ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| |||| |||||||| |||||||||||||||| | ||    
T  35853914 atgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actcaaatcaaag-accctaaaccctaaagttgct 35853817  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     |||||||||||| |||| |||||||||||    
T  35853816 acctttgatttcctaagtttctctctcttc 35853787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 29991141 - 29990921
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac-------caagaca 104  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||||||  ||||| |||||||||||| |||||||||||||||||       |||||||    
T  29991141 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaataacaa-ccctaatttctatccttttcccaatctcaccaatgaacaagaca 29991043  T
Q  105 ctcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct-tctccctttgattt 202  Q
    |||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| |||||||||||||||| | ||| ||||||||||    
T  29991042 ctcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgtct-cctttgattt 29990946  T
Q  203 cccaagtctctctctcttccaactc 227  Q
    ||||||| ||||||||||| |||||    
T  29990945 cccaagtttctctctcttcaaactc 29990921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 18413992 - 18414262
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||| |||||  || |  ||| |||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||    
T  18413992 aaatctgcacaagaacacttaaatactagtcttccaatgataaaattgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacg 18414090  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||| ||| ||||||| ||||||||| |  ||||||| || ||||||||| |||||| |||||||| || ||| | ||| | |||||||     
T  18414091 accagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccc-tgcaaaccagctcacg 18414189  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||| | |||||||| |||||| ||||| ||||||||| ||||| ||||||||||| |||| ||||||||||    
T  18414190 gcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaag 18414262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 31109347 - 31109071
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||    
T  31109347 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggca-gacaagt 31109249  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacag-cacc 435  Q
    ||||||||   ||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  ||    ||| ||||| |||| |||     
T  31109248 ccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggcact 31109149  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     ||||||||| |||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  31109148 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatttcaac 31109071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 331 - 502
Target Start/End: Complemental strand, 21811923 - 21811751
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||    ||| | ||||||    
T  21811923 gaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcac 21811824  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
     ||| |  | |||||||||||||  |||||||||| ||| ||| | ||||||||||| |||||||||||||||    
T  21811823 ggcatctcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 21811751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 4178862 - 4178647
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagcttgac-aagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcaccaa-------gac 103  Q
    |||| ||||||||||| |||||||||||||||||  | |||||||||| |||||| |||||||||||||| |||| ||||||||||||||       |||    
T  4178862 aaagagatacaaaagggttacaagaaattagctttcccaagttcacaaagaacaa-ccctaatttctaccttttttcccaatctcaccaatgaacaagac 4178764  T
Q  104 actcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    ||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || ||||||||||    
T  4178763 actcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgattt 4178666  T
Q  203 cccaagtctctctctcttc 221  Q
    | ||||| |||||||||||    
T  4178665 ctcaagtttctctctcttc 4178647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 297 - 502
Target Start/End: Complemental strand, 48408619 - 48408411
Alignment:
Q  297 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-at 393  Q
    ||||||||||||||| |  ||| |||  ||||| ||||||||||||||||   || |||||||||||||||||    |||||||||| ||||| ||| ||    
T  48408619 aatcgtgtcacgattggtacgtacgttacaaggtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagat 48408520  T
Q  394 cgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccac 492  Q
    |||| |||||||| |||||| | ||| | ||||||| ||| | | ||||||||||||||| ||||| ||||||||| ||||| |||||||| || |||||    
T  48408519 cgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccac 48408421  T
Q  493 aaatttgaag 502  Q
    ||||||||||    
T  48408420 aaatttgaag 48408411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 30024800 - 30025110
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||    
T  30024800 aagagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttctacccattttctcaatctcac 30024897  T
Q  98 -------caagacactcaatgattctctct-ttacaaggtgtttcccatg-ttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagct 188  Q
           ||||||||||||||||| || ||    |||||||||| | | | ||||||||| |||||| ||||||||||||| ||||| |||||||||| |    
T  30024898 caatgaacaagacactcaatgattttcactcacccaaggtgtttacaacgtttttcaacctaagaga-actctaatcaaag-accctcaaccctaaagtt 30024995  T
Q  189 tctccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcac 287  Q
     |  ||||||||||||||||| ||||||||||| | ||| || |  ||||||||| |||||||||| |||| ||| ||||  ||||   |||||||||||    
T  30024996 acctcctttgatttcccaagtttctctctcttcaagctctcattcaaaatctgca-aagaacacttatatagtagtcttcagctgtcaaaatcgtgtcac 30025094  T
Q  288 gattttcccaatcgtg 303  Q
    | ||| || |||||||    
T  30025095 gttttgccaaatcgtg 30025110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 513
Target Start/End: Original strand, 12397229 - 12397491
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaa-tcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | ||||||||  ||||||||  | ||||||| |||||||| ||||| ||||||||||||||||  | | ||||||| | ||| |||    
T  12397229 gcacaagaacacaatatatactagtattcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagt 12397327  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaatcgtgccacgattttgcacccctacaacctagctcacagc-accc 436  Q
    ||||||||  |||||||||||||||||||||   |||||||||| |||||||||          |||  ||    ||| ||| ||||||||| || ||      
T  12397328 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa----------gatcatgg---cctgcaaactagctcacggccactt 12397414  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  12397415 gaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatatcaac 12397491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 14069903 - 14070129
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||      
T  14069903 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctcacca 14070000  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgtt-ttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | |||||   |||||||||||| ||||||||||||| ||||| | |||||||| | |    
T  14070001 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttacccaacccaagaga-actctaatcaaag-accctcagccctaaagttac 14070098  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  14070099 ctcctttgatttcccaagtttctctctcttc 14070129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 14379931 - 14380157
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||      
T  14379931 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctcacca 14380028  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgtt-ttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | |||||   |||||||||||| ||||||||||||| ||||| | |||||||| | |    
T  14380029 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttacccaacccaagaga-actctaatcaaag-accctcagccctaaagttac 14380126  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  14380127 ctcctttgatttcccaagtttctctctcttc 14380157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 24514934 - 24515088
Alignment:
Q  98 caagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctt 196  Q
    ||||||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || ||||    
T  24514934 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctt 24515031  T
Q  197 tgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt 254  Q
    ||||||||||||| ||||||||||| | ||||| |||| ||||||||| ||||||||||    
T  24515032 tgatttcccaagtttctctctcttcaagctccc-cttcaaaatctgca-aagaacactt 24515088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 2479678 - 2479947
Alignment:
Q  235 aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| |||||||| ||||  ||| |  ||||||| |||| |||||| |||| || || ||||  ||||| || ||||||| |||    
T  2479678 aaatctgcacaagaacacttatatactagtcttcaactgataaaatcgtgccacg-ttttccaaatcatgccatgattgatgcgtacgacccaaggtacg 2479776  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaa-tcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||||  |||||||  | | ||||||| | ||||||| |  ||||||| || ||||| |||| ||||| ||||||||  ||||| | ||| | |||||||     
T  2479777 accaa-ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccc-tgcaaaccagctcacg 2479874  T
Q  431 gcacccgaaa-tcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||   |||| |||||||||||| ||||||||||||||||||||| |||||||| || |||||||||||||||    
T  2479875 gcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaag 2479947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 23555138 - 23554912
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcac- 97  Q
    |||||||||||||  || |||||||| |||||||||||||||||| | ||||||||||| |||||| |||||||||||||| ||||  |||||||||||     
T  23555138 gagttcttacaaagagg-tacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctaccattttttcccaatctcacc 23555041  T
Q  98 ------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
          ||||||||||||||||| || ||   |||||||||| | ||||||  |||| ||||||| ||||||||||||| ||| | |||||| ||| | |    
T  23555040 aatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaactcaagaga-actctaatcaaag-accttcaaccctgaagttac 23554943  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  23554942 ctcctttgatttcccaagtttctctctcttc 23554912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 47674013 - 47674239
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||||| |||||||||      
T  47674013 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttctcaatctcacca 47674110  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||| |||||||||||| ||||||||||||| ||| | |||| | ||| | |    
T  47674111 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaag-accttcaaccttgaagttac 47674208  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  47674209 ctcctttgatttcccaagtttctctctcttc 47674239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 48491652 - 48491418
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||||||||||||| |||||||||||||||       ||||||||||||||||| ||     
T  48491652 ggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttca 48491554  T
Q  119 ct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||    ||| |||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |  ||||||||||  ||||| ||||||    
T  48491553 ctcacccaaagtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacctcctttgatttatcaagtttctctc 48491456  T
Q  217 tcttccaactcccacttc-aaatctgcacaagaacactt 254  Q
    |||| ||||  |  |||| ||||||||||||||||||||    
T  48491455 tctt-caacctcttcttcaaaatctgcacaagaacactt 48491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 24265861 - 24265684
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| ||||||||    
T  24265861 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 24265762  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||  ||   ||||||||||||   |||||||||| ||| ||| | ||||||| ||| ||||| ||||||||| ||||    
T  24265761 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 24265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 502
Target Start/End: Original strand, 47264102 - 47264254
Alignment:
Q  351 acttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtca 448  Q
    ||||||| ||||||||| |  |||||||||| ||||| || ||| ||||||||||||  ||||| ||||| | |||||||  ||   | |||||||||||    
T  47264102 acttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccc-tacaaaccagctcacgacattacaaaatcgtgtca 47264200  T
Q  449 cgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||| ||||||||||||||| ||||| || |||||||| |||||||||||||||    
T  47264201 cgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaag 47264254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 47676206 - 47676432
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||| ||||||| |||| ||||||||||||||||| ||||| |||||||||      
T  47676206 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaac-aaccctaatttctacccattttctcaatctcacca 47676303  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct-t 189  Q
         ||||||||||| ||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  47676304 atgaacaagacactcattgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttat 47676401  T
Q  190 ctccctttgatttcccaagtctctctctcttc 221  Q
    || ||||||||||||||||| |||||||||||    
T  47676402 ct-cctttgatttcccaagtttctctctcttc 47676432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 1113755 - 1113529
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || ||| ||||||||||||| | |||| |||||| |||||| |||||||||||| || ||||| |||||||||      
T  1113755 gagttcttacaaa-gagatacaaatgggttataagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctatccattttctcaatctcacaa 1113658  T
Q  98 -----caagacactcaatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||   | ||| ||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |    
T  1113657 atgaacaagacactcaatgattttcactcacccaagttgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttac 1113560  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
    | ||||||||||||||||| |||||||||||    
T  1113559 ttcctttgatttcccaagtttctctctcttc 1113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 4586234 - 4586027
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    |||||||| |||||||||| | ||||||||||| |||||| ||||||||||||||| |||||||||||||||       |||||||||||||||||  |     
T  4586234 ggttacaaaaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgatttaca 4586136  T
Q  119 ct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| | ||| |||||||||| | |  ||||||||||||||||| | ||||    
T  4586135 ctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-agcctcaaccctaaagttacatcctttgatttcccaagtttttctc 4586038  T
Q  217 tcttccaactc 227  Q
    ||||| |||||    
T  4586037 tcttctaactc 4586027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 19502276 - 19502051
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcacc 98  Q
    ||||||||||||| | |||||||||| |||||||||||||||||| |||||| ||||||  ||||| || ||||||||| ||||||  | ||||||||||    
T  19502276 gagttcttacaaa-gagatacaaaagagttacaagaaattagctttgacaagctcacaaaaaacaa-ccttaatttctaaccttttttcgcaatctcacc 19502179  T
Q  99 a-------agacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    |       |||||||||||||||||| ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  19502178 actgaacaagacactcaatgattctcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 19502081  T
Q  191 tccctttgatttcccaagtctctctctctt 220  Q
      | ||||||||| ||||| | ||||||||    
T  19502080 ctcatttgatttctcaagtttgtctctctt 19502051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 38671292 - 38671506
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| | ||||||| |||||||||| | |||| |||||| |||||| ||||||||||||||| |||||||||||||||      
T  38671292 gagttcttacaaa-gtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcacaa 38671389  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  38671390 atgaacaagacactcaatgattttcgctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 38671487  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  38671488 ctcctttgatttcccaagt 38671506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 41317504 - 41317602
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||||| |||||| ||||||||||||||  |||||||||||||||||    
T  41317504 gagttcttacaaa-gggatacaaatggattacaagaaattagctttgacaagctcacaaagaacaa-ccctaatttctaccaattttcccaatctcacca 41317601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 25615951 - 25615785
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    |||||||||||||| | ||||||| || ||||||||||||||||| | ||||  ||||  ||||||||| |||||||||||| ||||||||||||||       
T  25615951 gagttcttacaaaatg-atacaaatgggttacaagaaattagcttaaacaagcgcacatagaacaaacc-taatttctacccattttcccaatctca--- 25615857  T
Q  100 agacactcaatgattctctct-ttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaaga 170  Q
    ||||||||||||||| |||||    |||||||||| | ||||||| |||||||||||| ||||||||||||||    
T  25615856 agacactcaatgattttctctcacccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaaga 25615785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 43864317 - 43864116
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccct-tttcccaatctcaccaa-------gacactcaatgattctct 118  Q
    ||||||| ||||||||||| | ||||||||||| |||||| |||||||||||||||  ||| |||||||||||||       |||||||||||||| ||     
T  43864317 ggttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacccacttttccaatctcaccaatgaacaagacactcaatgattttca 43864219  T
Q  119 ctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||   | ||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| |||||||||| | |  ||||||||||||||||| ||||||    
T  43864218 ctcacccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctc 43864121  T
Q  217 tcttc 221  Q
    |||||    
T  43864120 tcttc 43864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 23344048 - 23343975
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||||||| | |||| |||||| ||| ||||| |||||||||||||||||| |||||||||||    
T  23344048 ggttacaagaaattagcttcaacaagctcacaaagaataaaccttaatttctacccttttccaaatctcaccaa 23343975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 24525992 - 24526065
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||||| |||||| |||||| ||||||| |||||||||||||| |||||||||| |||||||    
T  24525992 gttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattttcccaatttcaccaa 24526065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 2361042 - 2361140
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  2361042 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcacca 2361139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 18126742 - 18126644
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttg-acaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||| |||||||||||| |||| ||||||||||||||| | |||| ||||||||||||    
T  18126742 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaac-aaccctaatttctacacatttttccaatctcacca 18126645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 27347915 - 27347817
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| || |||||||||||||| |||||||||||||||||    
T  27347915 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aatcctaatttctacccattttcccaatctcacca 27347818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 29608835 - 29608737
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| |||||| ||||||||||||||| |||||||||||||||||    
T  29608835 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 29608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 34310786 - 34310884
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    |||||||||||||| | ||||||| | ||||||||||||||||||  |||| ||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  34310786 gagttcttacaaaaag-atacaaatgtgttacaagaaattagcttcaacaatttcacaaagaac-aaccctaatttctacccattttcccaatctcacca 34310883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 41649081 - 41649293
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcac--- 97  Q
    ||||||||||||| |||||||||| || ||||||||||||||||  ||||| |||||| ||||||| |||||||||||||  |||| ||||||||||       
T  41649081 gagttcttacaaa-gggatacaaatgggttacaagaaattagctaaacaagctcacaaagaacaaa-cctaatttctaccaatttttccaatctcacaaa 41649178  T
Q  98 ----caagacactcaatgattctctctt-tacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
        ||||||||||||||||| || |||   |||||||||| | ||||||  |||||||||||| |||||||| |||||  ||| |||||||||| |       
T  41649179 tgaacaagacactcaatgattttcacttacccaaggtgtttacaatgtttcccaacccaagaga-actctaataaaaga--ccttaaccctaaagttaac 41649275  T
Q  192 ccctttgatttcccaagt 209  Q
     |||||||||||||||||    
T  41649276 tcctttgatttcccaagt 41649293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 44847696 - 44847632
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||  | |||||||||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaag 44847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 4253598 - 4253697
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    |||||||| | |||| |||| |||||| ||||| ||||||||||| | |||| |||||| ||||||||||||||||||||| |||| ||||| |||||||    
T  4253598 gagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccctaatttctaccattttaccaatttcaccaa 4253697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 16880476 - 16880555
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  || ||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||    
T  16880476 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgc 16880555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 16885331 - 16885410
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  || ||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||    
T  16885331 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgc 16885410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 458 - 513
Target Start/End: Original strand, 18390506 - 18390561
Alignment:
Q  458 aatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaac 18390561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22270070 - 22269973
Alignment:
Q  4 agttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  22270070 agttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcaccaa 22269973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 24261005 - 24260926
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||    
T  24261005 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 24260926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 31733039 - 31733267
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| | |||| |||||| |||| ||||||||||||||||| ||||| || ||||||      
T  31733039 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaac-aaccctaatttctacccattttctcagtctcacca 31733136  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| ||| |||||| | |    
T  31733137 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaactctaaagttac 31733234  T
Q  191 tccctttgatttcccaagtctctctctcttcca 223  Q
      | ||||||||| ||||| |||||||||||||    
T  31733235 ctcttttgatttctcaagtttctctctcttcca 31733267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 438 - 507
Target Start/End: Original strand, 21983790 - 21983859
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||||||    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  21983790 aaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 26417414 - 26417316
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||| ||| | |||| |||||| |||||| ||||||||||||||| |||||||||||||||||    
T  26417414 gagttcttacaaa-gagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 26417317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 48489504 - 48489270
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    |||||||||||||||||||  |||||||  ||| |||| ||||||||||||||||| |||||||||||||||       ||||||| | ||||||| ||     
T  48489504 ggttacaagaaattagcttcaacaagttttcaaagaac-aaccctaatttctacccattttcccaatctcaccaatgaacaagacatttaatgattttca 48489406  T
Q  119 ct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||| | |||||||||| | |  ||||||||||||||||| |||||     
T  48489405 ctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accatcaaccctaaagttacctcctttgatttcccaagtttctcta 48489308  T
Q  217 tcttccaactcccacttc-aaatctgcacaagaacactt 254  Q
    ||||| | || |  |||| ||||||||||||||||||||    
T  48489307 tcttcaatct-cttcttcaaaatctgcacaagaacactt 48489270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 8359386 - 8359485
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  |||||||||||||||| || | |||| |||||| ||| |||||||||||||||||| ||||||||||||| ||    
T  8359386 gagttcttacaaa-gagatacaaaatgggttacaagaaattagtttaaacaagctcacaaagaa-aaaccctaatttctacccattttcccaatctcccc 8359483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 12097954 - 12098027
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    ||||||||||||||| ||| | |||| ||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  12097954 ggttacaagaaattaacttcaacaagctcacaatgaacaa-ccctaatttctacccattttcccaatctaaccaa 12098027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 22328471 - 22328556
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctt--ttcccaatctc 95  Q
    |||| |||||||||| ||||||||||||||||||  ||||| |||||| |||||||| |||||||||| ||||  |||||||||||    
T  22328471 aaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaactctaatttctaacctttcttcccaatctc 22328556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 8153414 - 8153342
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||||| |||||  |||||| |||||| ||||||||||||| | ||||||||||||||||||    
T  8153414 gttacaagaaattagctttgacaatctcacaaagaacaa-ccctaatttctactcattttcccaatctcaccaa 8153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 48599430 - 48599502
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    ||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  48599430 gttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatatcaccaa 48599502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  456 aaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 502
Target Start/End: Complemental strand, 1532945 - 1532897
Alignment:
Q  454 ccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  1532945 ccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 4508776 - 4508874
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  | ||| |||||| |||| ||||||||||||||| | |||||||||||||||||    
T  4508776 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaataagctcacaaagaac-aaccctaatttctactcattttcccaatctcacca 4508873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 6432069 - 6431971
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| || |||||||||||||| |||||||||||| ||||    
T  6432069 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aatcctaatttctacccattttcccaatctaacca 6431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 502
Target Start/End: Original strand, 21989454 - 21989518
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||||||    ||||| |||||| ||||| ||||||||||| |||||||||||||||    
T  21989454 aaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaag 21989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 36146478 - 36146576
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||| ||||||||||| | |||| ||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  36146478 gagttcttacaaa-gagatacaaatgggttaca-gaaattagcttcaacaagctcacaaataacaaactctaatttctacccattttcccaatctcacca 36146575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 79955 - 80005
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| | ||||||||||||| ||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaat 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 3259067 - 3258995
Alignment:
Q  29 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    ||||||| |||||||||| | |||| |||||| |||||| ||||| ||||||||| ||||||||||||||||||    
T  3259067 gttacaataaattagcttaaacaagctcacaaagaacaa-ccctagtttctacccattttcccaatctcaccaa 3258995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 28617234 - 28617182
Alignment:
Q  28 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacc 81  Q
    ||||||||||||||||||| | ||| |||||| ||||||| |||||||||||||    
T  28617234 ggttacaagaaattagcttaa-aagctcacaaagaacaaaacctaatttctacc 28617182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 31105463 - 31105558
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    |||||||||||||| | ||||||| || |||||||||||||||||  ||||| |||||| ||| |||  ||||||||||||| |||||||||||||||    
T  31105463 gagttcttacaaaaag-atacaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaatctaatttctacccattttcccaatctcac 31105558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 4512959 - 4512995
Alignment:
Q  277 aatcgtgtcacgattttcccaatcgtgtcacgatttg 313  Q
    |||||||||||| |||||| |||||||||||||||||    
T  4512959 aatcgtgtcacgtttttccaaatcgtgtcacgatttg 4512995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 18126579 - 18126520
Alignment:
Q  157 actctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctct 217  Q
    |||||||||||||| |||| |||||||||| | |  ||||||||||||||||| |||||||    
T  18126579 actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctct 18126520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 23565131 - 23565210
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacc 81  Q
    ||||||||||||| | |||||||||| ||||||||||||||| || | |||| |||||| ||||||  |||||||||||||    
T  23565131 gagttcttacaaa-gagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacctaatttctacc 23565210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 31518893 - 31518795
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttgac-aagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | ||||||||||| |||||| |  ||| |||||| ||||||||| |||||||||||  |||||||||||||||||    
T  31518893 gagttcttacaaa-gagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaacc-taatttctacctattttcccaatctcacca 31518796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 2682 - 3184
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2682 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 2781  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  2782 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 2878  T
Q  209 tctctctctcttccaactcccac-ttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||  |||||||| | | ||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  2879 tctctctct--tccaactctctccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 2976  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgatt 405  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||| |    
T  2977 cgatttgcgtccgtcccaaggaacgaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-t 3075  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    |||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  3076 ttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 3175  T
Q  505 aatctcaac 513  Q
    |||||||||    
T  3176 aatctcaac 3184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 363; Significance: 0; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 12647464 - 12647966
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12647464 ttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 12647563  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  12647564 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 12647660  T
Q  209 tctctctctcttccaactcccac-ttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    |||||||||  |||||||| | | ||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  12647661 tctctctct--tccaactctctccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 12647758  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgatt 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||| ||||||||||||| |    
T  12647759 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacga-t 12647857  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    |||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  12647858 ttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 12647957  T
Q  505 aatctcaac 513  Q
    |||||||||    
T  12647958 aatctcaac 12647966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 506
Target Start/End: Complemental strand, 6266791 - 6266283
Alignment:
Q  1 aagagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6266791 aagagttcttacaaaagggatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 6266692  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  6266691 agacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttga 6266592  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaa 298  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||||||| ||| ||| |  ||||||||||||| |||||       
T  6266591 tttcccaagtctctctctcttcccactctc-cttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacga-tttccagg 6266494  T
Q  299 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcg 395  Q
    |||||||||||||  ||||| ||||||||| |||||||| ||||||||| ||| |||||||||| ||||||    |||||||||| |||||||| |||||    
T  6266493 tcgtgtcacgattggtgcgttcgtcccaagaaacgaccattccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcg 6266394  T
Q  396 tgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaa 494  Q
    || |||||||| ||| |||| ||| | ||||||| ||| | |||||| ||||||||||  |||| ||||||||| |||||| |||||||||| |||||||    
T  6266393 tgtcacgatttggca-ccctgcaaaccagctcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaa 6266295  T
Q  495 atttgaagacaa 506  Q
    ||||||||||||    
T  6266294 atttgaagacaa 6266283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 3 - 502
Target Start/End: Complemental strand, 32289662 - 32289161
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  32289662 gagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttctacccttttcc-aatctcaccaa 32289565  T
Q  101 gacactcaatgattctctctttacaaggtgtttcccatgttttcaa-cccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttga 199  Q
    |||||||||||||| || ||   |||||||||| |||||||| ||| |||||||||  ||||||||||||| | |||||||||| || | ||||||||||    
T  32289564 gacactcaatgattttcactcaccaaggtgtttaccatgtttccaaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttga 32289466  T
Q  200 tttcccaagtctctctctcttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    |||||||||| ||||||||||||| |||||  |||||| ||||||||||||||||| | |||||||| ||| ||| |  |||||||||||||||| ||      
T  32289465 tttcccaagtttctctctcttccatctccc--ttcaaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt-ccag 32289369  T
Q  298 atcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atc 394  Q
     ||||||||||||| |  ||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||| ||| | ||| |||    
T  32289368 gtcgtgtcacgattggagcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatc 32289269  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| || ||||| ||| |||| ||| | ||||||| ||| | | ||||||||||||||| ||||| ||||||||| ||||| ||||||||||| ||||||    
T  32289268 gtgtcaagatttggca-ccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccaca 32289170  T
Q  494 aatttgaag 502  Q
    |||||||||    
T  32289169 aatttgaag 32289161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 3 - 502
Target Start/End: Original strand, 4484400 - 4484910
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttc--ccaatctcacc 98  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||  ||||| |||||    
T  4484400 gagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttctcccaatttcacc 4484498  T
Q  99 aaga------cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    ||||      ||||||||||||  | ||   |||||||||| | |||||| | |||||||||||  ||||||||||||| |||||||||||| || | ||    
T  4484499 aagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccctaaaccctagagttact 4484597  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgat 290  Q
    |||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||| | |||||||||||| ||| |  ||||||||||||||    
T  4484598 ccctttgatttcccaagtttctctctcttccaactctct-ttcaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgat 4484696  T
Q  291 tttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcc 388  Q
    || ||  |||||||||||||| |  ||| |||||||||| |||||||||||||||||  || |||||||||||||||||    |||||||||| ||| |     
T  4484697 tt-ccagatcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattcct 4484795  T
Q  389 caa-atcgtgccacgattttgcacccctacaacctagctcacagcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttcca 486  Q
     || |||||| |||||||| |||||| | ||| ||||||||| ||| |  |||||||||||||||| ||||| ||||||||| ||||| |||||||||||    
T  4484796 taagatcgtgtcacgatttggcaccc-tgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttcca 4484894  T
Q  487 taccacaaatttgaag 502  Q
     |||||||||||||||    
T  4484895 gaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 3 - 502
Target Start/End: Complemental strand, 30833444 - 30832934
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttc--ccaatctcacc 98  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||  |||||||||||    
T  30833444 gagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttctacccttttctcccaatctcacc 30833346  T
Q  99 aaga------cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    ||||      ||||||||||||  | ||   ||| |||||| | |||||| | ||||||||| |  ||||||||||| |||||||||||||| || | ||    
T  30833345 aagaacaagacactcaatgatttacactcaccaaagtgtttacaatgtttcccaacccaagataagctctaatcaaa-aaccctaaaccctagagttact 30833247  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgat 290  Q
    |||||||||||||||||| ||| ||||||||| ||| | |||||||||||||||||||||||| | |||||| ||||| ||| |  ||||||||||||||    
T  30833246 ccctttgatttcccaagtttctttctcttccagctcac-cttcaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgat 30833148  T
Q  291 tttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcc 388  Q
    || || | ||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  |||||||||| ||||||    
T  30833147 tt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcc 30833049  T
Q  389 caa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttcca 486  Q
    ||| |||||| |||||||| |||||| | ||| | ||||||| ||| | |||||||||||||||||  |||| || |||||| ||||| |||||||||||    
T  30833048 caagatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttcca 30832950  T
Q  487 taccacaaatttgaag 502  Q
     |||||||||||||||    
T  30832949 gaccacaaatttgaag 30832934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 9296137 - 9295863
Alignment:
Q  241 gcacaagaacacttta--tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||||||  |||||| |||||||||  ||||||||||||||||||||  | ||||||||||||||||||||| ||||||| | ||||||||    
T  9296137 gcacaagaacactttaaatactagtcttcctctgaagcaatcgtgtcacgattttcaga-tcgtgtcacgatttgcgtccgacccaaggtatgaccagtc 9296039  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-c 436  Q
    |||||||||||||||||| |||||||||||   |||||||||| ||||||||| ||||||||||||||| |||  ||| ||| ||||||||| |||||      
T  9296038 cttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggca-tcctgcaaactagctcacggcacctt 9295940  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  9295939 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 9295863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 235 - 513
Target Start/End: Original strand, 14291844 - 14292124
Alignment:
Q  235 aaatctgcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacga 332  Q
    ||||||||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| ||  ||||||||||||||||||| |  ||||||| | ||    
T  14291844 aaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtatga 14291942  T
Q  333 ccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacag 431  Q
    |||||||||||||  | |||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| ||||||||| |    
T  14291943 ccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactagctcacgg 14292041  T
Q  432 cacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||| ||| ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  14292042 cacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 14292124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 13656103 - 13656220
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  13656103 gagttcttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaaga 13656202  T
Q  103 cactcaatgattctctct 120  Q
    ||||||||||||||||||    
T  13656203 cactcaatgattctctct 13656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 234 - 513
Target Start/End: Complemental strand, 11098669 - 11098388
Alignment:
Q  234 caaatctgcacaagaacactttata--ctagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||  ||||  |||| |||||||||  | ||||||| |||||||| ||  ||||||||||||||||||| |  |||||||   |    
T  11098669 caaatctgcacaagaacacaatatatgctagtcttcctctgaagaaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtttg 11098571  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||||||||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| |||||||||     
T  11098570 accagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactagctcacg 11098472  T
Q  431 gcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||  ||||||||||||| || ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  11098471 gcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 11098388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 3492094 - 3492364
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | |||||| ||||| ||| |  ||| |||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||    
T  3492094 aaatctgcacaagaacacttaaatactagtcttccactgataaaattgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacg 3492192  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    ||| |||||||||  ||| |||||||||||||||||||  |||||||||| ||||||||| |||||| |||||||| |||||| | ||| | |||||||     
T  3492193 acctgtccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccc-tgcaaaccagctcacg 3492291  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||||    
T  3492292 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaag 3492364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 235 - 502
Target Start/End: Original strand, 25409983 - 25410253
Alignment:
Q  235 aaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| | ||  | |||||||||| |  ||| |||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||    
T  25409983 aaatctgcacaagaacacttaaatatcatccttcctctgataaaattgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacg 25410081  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||| ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||| |||||| |||||||| ||| |||| ||| | | |||||     
T  25410082 accattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggca-ccctgcaaaccatctcacg 25410180  T
Q  431 gca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||| | | ||||||||||||||| ||||| ||||||||| ||||| ||||||||||| |||||||||||||||    
T  25410181 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 36205744 - 36205959
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcaccaa-------gac 103  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||       |||    
T  36205744 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccatttttcccaatctcaccaatgaacaagac 36205842  T
Q  104 actcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    ||||||||||| || ||   |||||||||| |||||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || ||||||||||    
T  36205843 actcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgattt 36205940  T
Q  203 cccaagtctctctctcttc 221  Q
    ||||||| |||||||||||    
T  36205941 cccaagtttctctctcttc 36205959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 45099843 - 45099627
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------ga 102  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||       ||    
T  45099843 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaatgaacaaga 45099745  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || |||||||||    
T  45099744 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatt 45099647  T
Q  202 tcccaagtctctctctcttc 221  Q
    |||||||| |||||||||||    
T  45099646 tcccaagtttctctctcttc 45099627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 5723326 - 5723550
Alignment:
Q  3 gagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||||| |||||||||       
T  5723326 gagttcttacaaa-gagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcc-taatttctacccttttctcaatctcaccaa 5723423  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctc 192  Q
        ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| |||| ||||||||||| | |      
T  5723424 tgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accccaaaccctaaagttgcct 5723521  T
Q  193 cctttgatttcccaagtctctctctcttc 221  Q
    ||||||||||||||||| |||||||||||    
T  5723522 cctttgatttcccaagtttctctctcttc 5723550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 39811753 - 39811478
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||    
T  39811753 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggca-gacaagt 39811655  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacag-cacc 435  Q
    ||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| || ||| || | |||     
T  39811654 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaacttgcttacggtcact 39811556  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  39811555 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 39811478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 4503212 - 4503428
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------ga 102  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||| ||||  ||||||||| ||||       ||    
T  4503212 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttttcccaatctctccaatgaacaaga 4503310  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    |||||||||||| || ||   |||||||||| | |||||| | ||||||||||| ||||||||||||||||| |||||||||||| | || |||||||||    
T  4503311 cactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaacc-taaaccctaaagttgcttcctttgatt 4503408  T
Q  202 tcccaagtctctctctcttc 221  Q
    |||||||| |||||||||||    
T  4503409 tcccaagtttctctctcttc 4503428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 277 - 502
Target Start/End: Original strand, 40739217 - 40739444
Alignment:
Q  277 aatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 374  Q
    |||||||||||||||| || |||||||||||||||  | ||| |||| ||||| |||||| |||||||||  | | ||||||||||||||||| |  ||     
T  40739217 aatcgtgtcacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatt 40739315  T
Q  375 gtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagca-cccgaaatcgtgtcacgataccaaaatcgtgtcacaatt 472  Q
    ||||||||||| | ||| |||||| |||||||| ||| |||| ||| | ||||||| |||   | ||||||||||||||| ||||| ||||||||| |||    
T  40739316 gtgtcacaattccacaagatcgtgtcacgatttggca-ccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatt 40739414  T
Q  473 tccctgttcttccataccacaaatttgaag 502  Q
    |  ||||||||||| |||||||||||||||    
T  40739415 tgtctgttcttccagaccacaaatttgaag 40739444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 311
Target Start/End: Original strand, 2334488 - 2334803
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||||| ||||| |||||||||||| | ||||||||||| |||||| |||| |||||||||| |||||||||||||||      
T  2334488 gagttcttacaaa-gagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaa-cccttatttctacccattttcccaatctcacca 2334585  T
Q  98 -----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
         ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||  ||||| |||||||||| | |     
T  2334586 atgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaa-taccctcaaccctaaagttacc 2334683  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacga 289  Q
     ||||||||||||||||| ||||||||||| | ||| | |||| ||||||||| |||||||||| ||||  || ||||  | || | ||||||||||||     
T  2334684 tcctttgatttcccaagtttctctctcttcaagctcac-cttcaaaatctgca-aagaacacttatatagcagtcttcagc-gtcgaaatcgtgtcacgt 2334780  T
Q  290 ttttccc-aatcgtgtcacgatt 311  Q
    ||||||| |||||||||||||||    
T  2334781 ttttcccaaatcgtgtcacgatt 2334803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 36988146 - 36988371
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttc-ccaatctcacca 99  Q
    ||||||||||||| | |||||||||| ||||||||||||||| || |||||| |||||  |||||| |||||||||||||||||||  |||||| |||||    
T  36988146 gagttcttacaaa-gagatacaaaagagttacaagaaattagttttgacaagctcacatagaacaa-ccctaatttctacccttttttccaatcccacca 36988243  T
Q  100 a-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |       |||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |     
T  36988244 atgaacaagacactcaatgattttcactcaccaaggtgtttactatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacc 36988341  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  36988342 tcctttgatttcccaagtttctctctcttc 36988371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 391 - 513
Target Start/End: Original strand, 32247229 - 32247351
Alignment:
Q  391 aatcgtgccacgattttgcacccctacaacctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccatacc 490  Q
    |||||||||||||||||||| ||    ||| | |||||| ||| |  ||||||||||||||| ||||||||||||||| ||||| ||||||||||| |||    
T  32247229 aatcgtgccacgattttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagacc 32247328  T
Q  491 acaaatttgaagacaatctcaac 513  Q
    |||||||||||| |||| |||||    
T  32247329 acaaatttgaagccaatatcaac 32247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 42362450 - 42362236
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| |||||||||||||||      
T  42362450 gagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcacaa 42362353  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  42362352 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 42362255  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  42362254 ctcctttgatttcccaagt 42362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 437 - 513
Target Start/End: Complemental strand, 44310548 - 44310472
Alignment:
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  44310548 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 44310472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29867969 - 29867869
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||    
T  29867969 aagagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcac 29867872  T
Q  98 caa 100  Q
    |||    
T  29867871 caa 29867869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 38312313 - 38312112
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    |||||||||||||||| || | ||||||||||| |||||| ||||||||||||||| |||||||||||||||       ||||||||||||||||| ||     
T  38312313 ggttacaagaaattagtttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttca 38312215  T
Q  119 ct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||   ||||||||| | | ||||||  |||||||||||| ||||||||||||||| ||| |||||||||| | |  ||||||||||||||| | ||||||    
T  38312214 ctcacacaaggtgtatacaatgtttcccaacccaagaga-actctaatcaaagaa-cctcaaccctaaagttacctcctttgatttcccaaatttctctc 38312117  T
Q  217 tcttc 221  Q
    |||||    
T  38312116 tcttc 38312112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 209
Target Start/End: Complemental strand, 11690589 - 11690385
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagac 103  Q
    ||||||||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| |||||||||||||||       ||||||    
T  11690589 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcacaaatgaacaagac 11690491  T
Q  104 actcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatt 201  Q
    ||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||| ||||||||| ||||| |||||||||| | |  |||||||||    
T  11690490 actcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actataatcaaag-accctcaaccctaaagttacctcctttgatt 11690393  T
Q  202 tcccaagt 209  Q
    ||||||||    
T  11690392 tcccaagt 11690385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 13121845 - 13121769
Alignment:
Q  25 aaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    |||||||||||||||||| ||| | |||| |||||| ||||||||||||||||||||| |||||||| |||||||||    
T  13121845 aaaggttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctaccattttcccagtctcaccaa 13121769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 14633895 - 14634110
Alignment:
Q  3 gagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||||||||||||||  |||||||||||||||||||  ||||| |||||| |||| || |||||||||||||| |||| ||||||||||      
T  14633895 gagttcttacaaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aatcctaatttctacccattttaccaatctcacaa 14633993  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||| ||| |||||||||||| |||||| ||| |||||| | |    
T  14633994 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaaga-actctaatcaaa-aaccctcaactctaaagttac 14634091  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  14634092 ctcctttgatttcccaagt 14634110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 6595076 - 6595302
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc--cttttcccaatctcac- 97  Q
    ||||||||||||| | ||| ||||||| |||||||||||||||||  |||||||||||| |||| ||||||||||||||||   |||||| ||||||||     
T  6595076 gagttcttacaaa-gagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctaccattttttcctaatctcacc 6595173  T
Q  98 ------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
          |||||||| ||||||||||| || | ||| |||||| | || |||  || ||||||||| ||||||||||||| ||||| |||||||||| | |    
T  6595174 aatgaacaagacacccaatgattctcactctccaaagtgtttacaatttttcccagcccaagaga-actctaatcaaag-accctcaaccctaaagttac 6595271  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      | |||||||||| |||| |||||||||||    
T  6595272 ctcatttgatttcctaagtttctctctcttc 6595302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 34139840 - 34139936
Alignment:
Q  3 gagttcttacaaaagggataca-aaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    |||||||||||||||||||||| |  |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||| |||||||||    
T  34139840 gagttcttacaaaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattttctcaatctcac 34139936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 723814 - 724028
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| ||||||||||||||  ||| ||||||||||      
T  723814 gagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccagttttccaatctcacaa 723911  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||| ||| ||||||||||||| ||||| |||||||||| | |    
T  723912 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaaga-actctaatcaaag-accctcaaccctaaagttac 724009  T
Q  191 tccctttgatttcccaagt 209  Q
      |||||||||||||||||    
T  724010 ctcctttgatttcccaagt 724028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 45727027 - 45726929
Alignment:
Q  3 gagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||||| |||| ||| ||||||||||||| |||||||||||||||||    
T  45727027 gagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttctacccattttcccaatctcacca 45726930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 19344825 - 19344904
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||| ||||||||    
T  19344825 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgc 19344904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 19349683 - 19349762
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgc 409  Q
    |||||||||||||||  |||||||||| | ||||||||   |||||||||| ||||||||| ||||||||||||||||||    
T  19349683 gaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgc 19349762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 11151659 - 11151875
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||||||  ||||||||||||| |||||||||| ||||    
T  11151659 aagagttcttacaaa-gtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-tctaatttctacccattttcccaatttcac 11151756  T
Q  98 -------caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagct 188  Q
           ||||| ||||||||||| || ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| |    
T  11151757 caatgaacaagagactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagtt 11151854  T
Q  189 tctccctttgatttcccaagt 209  Q
     |  |||||||||||||||||    
T  11151855 acctcctttgatttcccaagt 11151875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 39284853 - 39284757
Alignment:
Q  124 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |  ||||||||||||||||| |||||||||||    
T  39284853 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 39284757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 39483443 - 39483493
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaat 39483493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 24398145 - 24398055
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccctt--ttcccaatctcaccaa 100  Q
    |||| ||||||||||| ||||||||||||||||| | |||| |||||| ||||||||| ||| ||||||||||  ||| ||||||||||||    
T  24398145 aaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccttaacttctaccctttcttcacaatctcaccaa 24398055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 26353267 - 26353184
Alignment:
Q  19 gatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    |||||||||| |||||||||||||||||| | |||  |||||| ||||||||| |||||||||| |||||  ||||||||||||    
T  26353267 gatacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttctacacttttttcaatctcaccaa 26353184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 8389681 - 8389631
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8389631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36773662 - 36773562
Alignment:
Q  1 aagagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| |||||| ||||||||| | ||| |||||||||||||||    
T  36773662 aagagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttattcccattttcccaatctcac 36773565  T
Q  98 caa 100  Q
    |||    
T  36773564 caa 36773562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 33648253 - 33648176
Alignment:
Q  20 atacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    |||||||||| ||||| ||||||||||| | |||| |||||| |||||||||||||||| |||| ||||| |||||||    
T  33648253 atacaaaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaatttttaccattttctcaatctc 33648176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 507
Target Start/End: Complemental strand, 36757477 - 36757425
Alignment:
Q  455 caaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||||| ||||  ||||||||||| ||||||||||||||| ||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Complemental strand, 28258729 - 28258682
Alignment:
Q  455 caaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaag 28258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 10706783 - 10706733
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| || |||||||||||| ||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 10706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 21630511 - 21630561
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| || |||||||||||| ||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 21630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 33162545 - 33162618
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |||||| ||| |||||||    
T  33162545 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcctaatttcaccaa 33162618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 33528155 - 33528105
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||| ||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 42288205 - 42288278
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||| |||||||||| | |||| |||||| |||||| || |||||||||||| ||||||||||||||||||    
T  42288205 ggttacaataaattagcttcaacaagctcacaaagaacaa-ccttaatttctacccattttcccaatctcaccaa 42288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 14202501 - 14202569
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 96  Q
    ||||||||||||||||||  ||||| |||||| ||||||| | |||||||||||| ||||||||||||||    
T  14202501 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cataatttctacccattttcccaatctca 14202569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 11067403 - 11067305
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||| |||||||| |||||| | || ||| ||||||||||||| |||| ||||| ||||||    
T  11067403 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagctcacaaagtac-aacactaatttctacccatttttccaatttcacca 11067306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 463 - 507
Target Start/End: Original strand, 20522794 - 20522838
Alignment:
Q  463 tgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 28770781 - 28770730
Alignment:
Q  30 ttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 82  Q
    ||||||||||||||||| | ||| |||||| |||||||| |||||||||||||    
T  28770781 ttacaagaaattagcttaa-aagctcacaaagaacaaactctaatttctaccc 28770730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 35446954 - 35447052
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||| ||  ||||| |||||| |||| ||||||||||||||||  |||| ||||||||||||    
T  35446954 gagttcttacaaa-gagatacaaatgggttacaagaaattagattcaacaagatcacaaagaac-aaccctaatttctaccaattttaccaatctcacca 35447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 36318079 - 36318177
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||| ||||||| || | |||| |||||| |||||| ||||||||||||||| |||| ||||||||||||    
T  36318079 gagttcttacaaa-gagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaa-ccctaatttctacccatttttccaatctcacca 36318176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 362; Significance: 0; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 9 - 518
Target Start/End: Complemental strand, 7122773 - 7122263
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7122773 ttacaaaaggaatacaagaggttacaagaaattagtttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 7122674  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  7122673 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 7122575  T
Q  209 tctctctctcttccaactcc-cacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtca 306  Q
    ||||||||| ||| | || | | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7122574 tctctctct-ttcaaccttctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtca 7122476  T
Q  307 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgatt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||| |    
T  7122475 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-t 7122377  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    |||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  7122376 ttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagac 7122277  T
Q  505 aatctcaactgatg 518  Q
    || |||||| ||||    
T  7122276 aaactcaacagatg 7122263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 8395700 - 8395192
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8395700 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacatgttcactatgaacaaaccctaatttctacccttttcccaatctcaccaaga 8395601  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  8395600 cactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgattt 8395504  T
Q  203 cccaagtctctctctcttccaa--ctcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    ||||||  ||||||||||||||  ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||    
T  8395503 cccaag--tctctctcttccaaccctctctcttcaaatctgcacaagaacactttatactagccttcctctgttgaaatcgtgtcacgatttcccaaatc 8395406  T
Q  301 gtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcc 399  Q
    |||||||||| ||||| |  |||||| |||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| | |||||||||||||||     
T  8395405 gtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgct 8395306  T
Q  400 acgattttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
    |||| ||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  8395305 acga-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 8395207  T
Q  499 gaagacaatctcaac 513  Q
    |||||||||||||||    
T  8395206 gaagacaatctcaac 8395192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 8393491 - 8392983
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaaga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8393491 gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacatgttcactatgaacaaaccctaatttctacccttttcccaatctcaccaaga 8393392  T
Q  103 cactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  8393391 cactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccataaaccctagagcttc-ccctttgattt 8393295  T
Q  203 cccaagtctctctctcttccaa--ctcccacttcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgattttcccaatc 300  Q
    |||| |  ||||||||||||||  ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||    
T  8393294 cccagg--tctctctcttccaaccctctctcttcaaatctgcacaagaacactttatactagccttcctctgttgaaatcgtgtcacgatttcccaaatc 8393197  T
Q  301 gtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcac-aatttcccaaatcgtgcc 399  Q
    |||||||||| ||||| |  |||||| || ||||||||||||||| ||||||||||||||||||||||  ||||||||||| | ||||||||||||||||    
T  8393196 gtgtcacgatctgcgtaccacccaagaaaagaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgcc 8393097  T
Q  400 acgattttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaattt 498  Q
    |||| ||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  8393096 acga-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 8392998  T
Q  499 gaagacaatctcaac 513  Q
    |||||||||||||||    
T  8392997 gaagacaatctcaac 8392983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 5138380 - 5137876
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5138380 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 5138281  T
Q  108 aatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaa 207  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  5138280 aatgattctctct--acaaggtatttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaa 5138184  T
Q  208 gtctctctctcttccaac-tcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtc 305  Q
    || |||||||  |||||| || | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||  |||||||||||    
T  5138183 gtttctctct--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtc 5138086  T
Q  306 acgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacga 403  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| |||||    
T  5138085 acgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga 5137986  T
Q  404 ttttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
     ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  5137985 -tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 5137887  T
Q  503 acaatctcaac 513  Q
    |||||||||||    
T  5137886 acaatctcaac 5137876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 5136155 - 5135650
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactc 107  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5136155 ttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactc 5136056  T
Q  108 aatgattctctctttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttccca 206  Q
    |||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  5136055 aatgattctctct--acaaggtatttcccatgtttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttccca 5135959  T
Q  207 agtctctctctcttccaac-tcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgt 304  Q
    ||| |||||||  |||||| || | |||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||  ||||||||||    
T  5135958 agtttctctct--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgt 5135861  T
Q  305 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacg 402  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||  || |||||||| ||||    
T  5135860 cacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacg 5135761  T
Q  403 attttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    | ||||||||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  5135760 a-tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaa 5135662  T
Q  502 gacaatctcaac 513  Q
    ||||||||||||    
T  5135661 gacaatctcaac 5135650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 506
Target Start/End: Original strand, 31495386 - 31495893
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcacca 99  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  31495386 gagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaatcc-taatttctacccttttcccaatctcacca 31495484  T
Q  100 agacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttg 198  Q
    ||||||||||||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| |  ||||||||| || | |||||||||    
T  31495485 agacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctataaaccctagagttactccctttg 31495583  T
Q  199 atttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttccca 297  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| | || ||||| ||| ||| |  |||||||||||||||| ||      
T  31495584 atttcccaagtttctctctcttccaactctc-cttcaaatctgcacaagaacacttaaatattagccctccactgataaaatcgtgtcacgattt-ccag 31495681  T
Q  298 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatc 394  Q
     | |||||||||||  ||||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||    |||||||||| |||||||| ||||    
T  31495682 gttgtgtcacgattggtgcgttcgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 31495781  T
Q  395 gtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccaca 493  Q
    ||| |||||||| |||||| | ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  31495782 gtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 31495880  T
Q  494 aatttgaagacaa 506  Q
    |||||||||||||    
T  31495881 aatttgaagacaa 31495893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 3 - 502
Target Start/End: Original strand, 13992363 - 13992866
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcacc 98  Q
    |||||||||||| ||  ||||||||| ||||||||||||||| || ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||    
T  13992363 gagttcttacaagag--atacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcacc 13992459  T
Q  99 aagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctcccttt 197  Q
    |||||||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || |||||    
T  13992460 aagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagagactctaatcaaaga-ccctaaaccctaaagttgctaccttt 13992558  T
Q  198 gatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttccc 296  Q
    |||||||||||| ||||||||||| | ||| | || ||||||||||||||||||||| | |||||| ||||| ||| |  |||||||||||||||| ||     
T  13992559 gatttcccaagtttctctctcttcaagctctccctccaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-cca 13992657  T
Q  297 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaa-t 393  Q
     ||||||||||||||  | ||| |||| ||||| | ||||||||||||||| | | ||||||||||||||||| |  |||||||||| |||||||||| |    
T  13992658 gatcgtgtcacgattgatacgtacgtcacaaggtatgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaat 13992757  T
Q  394 cgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccac 492  Q
    |||| |||||||| |||||| | ||| | |||||||  || | ||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| |||||    
T  13992758 cgtgtcacgatttggcaccc-tgcaaaccagctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccac 13992856  T
Q  493 aaatttgaag 502  Q
    ||||||||||    
T  13992857 aaatttgaag 13992866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 7124992 - 7124785
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7124992 ttacaaaaggaatacaagaggttacaagaaattagtttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 7124893  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  7124892 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 7124794  T
Q  209 tctctctct 217  Q
    |||||||||    
T  7124793 tctctctct 7124785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 323 - 513
Target Start/End: Complemental strand, 7124681 - 7124490
Alignment:
Q  323 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacgattttgcacccctacaacc 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||| |||||||| |||||    
T  7124681 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaacc 7124583  T
Q  422 -tagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  7124582 ctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaac 7124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 234 - 513
Target Start/End: Original strand, 24742295 - 24742576
Alignment:
Q  234 caaatctgcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||  | |||||||| |||||||||  | |||||||||||||||| ||  |||||| |||||||||||||||| || ||| | |    
T  24742295 caaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtggcacgatttgcgtccgttcccaggtatg 24742393  T
Q  332 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| |||||||||     
T  24742394 accagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacg 24742492  T
Q  431 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  24742493 gcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 24742576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 241 - 513
Target Start/End: Original strand, 51520775 - 51521049
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 338  Q
    ||||||||||||  | ||||||||||||||||||  ||||| ||| |||||||| || ||||||||||||||||||||| | ||||||| | || |||||    
T  51520775 gcacaagaacacaatatatactagccttcctctgaagcaattgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gatcagtc 51520873  T
Q  339 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-c 436  Q
    ||||||| ||||||||||||||||||||||   |||||||||  ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| || ||      
T  51520874 cttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcccctt 51520972  T
Q  437 gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  51520973 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 51521049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 56141788 - 56141512
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| || | ||||||||||||||||| || | ||||||| | |||||||    
T  56141788 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgacccaaggta-gaccagt 56141690  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac-agcacc 435  Q
    |||||||| ||||||||||||||||||||||   |||||||||| ||||||||| |||||||||||||||||    ||| ||| ||||||||| | | |     
T  56141689 ccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaactagctcacgacccct 56141590  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | ||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  56141589 ccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 56141512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 241 - 513
Target Start/End: Complemental strand, 9228962 - 9228687
Alignment:
Q  241 gcacaagaacac--tttatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 337  Q
    ||||||||||||  | |||||||| |||||||||  | ||||||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||    
T  9228962 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggta-gacaagt 9228864  T
Q  338 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc-acc 435  Q
    ||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| | ||||||| || ||     
T  9228863 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaacgagctcacggccact 9228765  T
Q  436 cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  9228764 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 9228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 277 - 502
Target Start/End: Complemental strand, 28468217 - 28467990
Alignment:
Q  277 aatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 374  Q
    |||||||||||||||| || | |||||||||||||||  ||| |||| ||||| |||||||||||||||||  || ||||||||||||||||| |  |||    
T  28468217 aatcgtgtcacgattt-ccaagtcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatc 28468119  T
Q  375 gtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatt 472  Q
    ||||||| |||| |||| |||||| |||||||| |||||| | ||| | ||||||| ||| | | ||||||||| ||||| ||||| ||||||||| |||    
T  28468118 gtgtcacgattttccaagatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgatt 28468020  T
Q  473 tccctgttcttccataccacaaatttgaag 502  Q
    || |||||||||||||||||||||||||||    
T  28468019 tctctgttcttccataccacaaatttgaag 28467990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 255 - 513
Target Start/End: Complemental strand, 9224159 - 9223900
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatact 353  Q
    |||||||| |||||||||  | ||| ||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||||||||||  ||||||    
T  9224159 tatactagtcttcctctgaagaaattgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatact 9224061  T
Q  354 taacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc-acccgaaatcgtgtcacga 451  Q
    |||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| ||||||||| || ||  |||||||||||||||    
T  9224060 taacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcc-tgcaaactagctcacggccacttgaaatcgtgtcacga 9223962  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  9223961 tgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 9223900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 29999876 - 30000101
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac--- 97  Q
    ||||||||||||||  |||||||||| |||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||||||||||||||||       
T  29999876 gagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttcacaaagaacaa-ccctaatttctacccttttcccaatctcaccaa 29999974  T
Q  98 ----caagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagct-tct 191  Q
        |||||||||||| |||| || ||   |||||||||| | |||||| | ||||||||||| ||||||||||||| |||||||||||||||| | |||    
T  29999975 tgaacaagacactcaacgattttcactcaccaaggtgtttacaatgtttccaaacccaagaga-actctaatcaaag-accctaaaccctaaagttgtct 30000072  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  30000073 -cctttgatttcccaagtttctctctcttc 30000101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 297 - 452
Target Start/End: Original strand, 29761040 - 29761196
Alignment:
Q  297 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcg 395  Q
    ||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||    
T  29761040 aatcgtgccacgatttgcgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcg 29761139  T
Q  396 tgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgat 452  Q
    ||||||||||| ||   ||| ||| ||||||||| ||||| |||||||||||||||||    
T  29761140 tgccacgatttggc-gtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 18856125 - 18856308
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||| ||||||||||||||| ||    ||| | ||||||    
T  18856125 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcac 18856224  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||   |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  18856225 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaac 18856308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 45347501 - 45347324
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||| ||    ||| | ||||||    
T  45347501 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 45347402  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||| |   |||||||||||||| ||||||||||||||| |||||  |||||||||| ||||||||||||||| ||||    
T  45347401 ggcatctctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 3814422 - 3814604
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaaatcgtgccacgattttgcacccctacaacctagctcaca 430  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||||||||| |||||||| ||  |  | ||| || ||| ||     
T  3814422 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaatcgtgacacgatttggcgtct-tgcaaacttgcttacg 3814520  T
Q  431 g-cacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | |||  |||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  3814521 gtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 3814604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 56178707 - 56178932
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| | ||||||||||| |||||| ||||||||||||||| |||||||||||||||      
T  56178707 gagttcttacaaa-gagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctcacca 56178804  T
Q  98 -----caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
         ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| ||| | |||||||||| | |     
T  56178805 atgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accttcaaccctaaagttacc 56178902  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  56178903 tcctttgatttcccaagtttctctctcttc 56178932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 5733062 - 5733246
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagct-ca 428  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||| ||  || | ||| || ||| ||    
T  5733062 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcc-tgcaaacttgcttca 5733160  T
Q  429 cagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | ||||| ||||||||||||||||| ||||||||||||||  ||||| |||||||| || ||||||||||||||| |||| |||||    
T  5733161 cggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaac 5733246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 9927528 - 9927753
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc- 98  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||||||||||||||||     
T  9927528 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcacca 9927625  T
Q  99 ------aagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
          |||||||||| ||||| || ||   |||||||||| | ||||||  |||||||||||| ||| ||||||||| ||||| |||||||||| | |     
T  9927626 atgaataagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaag-accctcaaccctaaagttacc 9927723  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  9927724 tcctttgatttcccaagtttctctctcttc 9927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 52095457 - 52095658
Alignment:
Q  28 ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||       ||||||||||||||||| ||     
T  52095457 ggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttca 52095555  T
Q  119 ct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||    |||||||||| | ||||||  |||||||||||| |||||||||||||  |||| |||||||||| | |  ||||||||||||||||| ||||||    
T  52095556 ctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-tccctcaaccctaaagttacctcctttgatttcccaagtttctctc 52095653  T
Q  217 tcttc 221  Q
    |||||    
T  52095654 tcttc 52095658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 48143126 - 48142823
Alignment:
Q  19 gatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaa-------gacactc 107  Q
    ||||||||||| ||||||||||||||||| | ||||||||||| |||||| |||||||||||||| ||||  ||||||||||||||       |||||||    
T  48143126 gatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacctttttttcccaatctcaccaatgaacaagacactc 48143028  T
Q  108 aatgattctctctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttccc 205  Q
    ||||||| || ||   | ||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | |  |||||||||||||    
T  48143027 aatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttccc 48142930  T
Q  206 aagtctctctctcttccaactcccacttc-aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttccc-aatcgt 302  Q
    |||| ||||||||||| | ||| | |||| ||| ||||| |||||||||| ||||  || ||||  | || | |||||||||||| ||||||| ||||||    
T  48142929 aagtttctctctcttctagctctctcttcaaaaactgca-aagaacacttatatagcagacttcagc-gtcgaaatcgtgtcacgtttttcccaaatcgt 48142832  T
Q  303 gtcacgatt 311  Q
    |||||||||    
T  48142831 gtcacgatt 48142823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 335 - 474
Target Start/End: Complemental strand, 18712435 - 18712295
Alignment:
Q  335 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacag-c 432  Q
    |||||||||||  |||||||||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||   ||| ||| ||||||||| | |    
T  18712435 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc-gtcctgcaaactagctcacggcc 18712337  T
Q  433 acccgaaatcgtgtcacgataccaaaatcgtgtcacaatttc 474  Q
    ||  |||||||||||||||| ||||||||||||||| |||||    
T  18712336 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 18712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 34570509 - 34570712
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa-------gacactcaatgattctct 118  Q
    ||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||  ||||||||||||||||||       |||||||||||||| ||     
T  34570509 ggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacctattttcccaatctcaccaatgaacaagacactcaatgattttca 34570607  T
Q  119 ctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||   | ||| ||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||||| |  ||||||||||||||||| ||||||    
T  34570608 ctcacccaagatgttttcaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagctacctcctttgatttcccaagtttctctc 34570705  T
Q  217 tcttcca 223  Q
    | |||||    
T  34570706 tgttcca 34570712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 37740723 - 37740498
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaa-tctcacca 99  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| | ||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||    
T  37740723 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttataccctttttccaaatctcacca 37740626  T
Q  100 a-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    |       |||||||| ||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||  | |     
T  37740625 atgaacaagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaacttacc 37740528  T
Q  192 ccctttgatttcccaagtctctctctcttc 221  Q
     ||||||||||||||||| |||||||||||    
T  37740527 tcctttgatttcccaagtttctctctcttc 37740498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 54199976 - 54200201
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| |||||||||||||||      
T  54199976 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctcacca 54200073  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    ||| |||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |    
T  54200074 atgaacaagacactcaatgattttcactcacccaatgtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttac 54200171  T
Q  191 tccctttgatttcccaagtctctctctctt 220  Q
      |||||||||||| |||| ||||||||||    
T  54200172 ctcctttgatttcctaagtttctctctctt 54200201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 12739645 - 12739846
Alignment:
Q  28 ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta-cccttttcccaatctcac-------caagacactcaatgattctct 118  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||||| || |||||||||||||||       |||||||||||||||||  |     
T  12739645 ggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatttcca 12739743  T
Q  119 ctttac-aaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||   | ||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |  ||||||||||| ||||| ||||||    
T  12739744 ctcacctaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacctcctttgatttctcaagtttctctc 12739841  T
Q  217 tcttc 221  Q
    |||||    
T  12739842 tcttc 12739846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 12747851 - 12748052
Alignment:
Q  28 ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta-cccttttcccaatctcac-------caagacactcaatgattctct 118  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||||| || |||||||||||||||       |||||||||||||||||  |     
T  12747851 ggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatttcca 12747949  T
Q  119 ctttac-aaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||   | ||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |  ||||||||||| ||||| ||||||    
T  12747950 ctcacctaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacctcctttgatttctcaagtttctctc 12748047  T
Q  217 tcttc 221  Q
    |||||    
T  12748048 tcttc 12748052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 439 - 513
Target Start/End: Original strand, 18860446 - 18860520
Alignment:
Q  439 aatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaac 18860520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 52082752 - 52082953
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctct 118  Q
    |||||||||||||||| || ||||||||||||| |||| ||||||| ||||||||| |||||||||||||||       ||||||| ||||||||| ||     
T  52082752 ggttacaagaaattagttttgacaagttcacaaagaac-aaccctagtttctacccattttcccaatctcaccaatgaacaagacagtcaatgattttca 52082850  T
Q  119 ct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||    |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| |||||||||| | |  ||||||||||||||||| ||||||    
T  52082851 ctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacctcctttgatttcccaagtttctctc 52082948  T
Q  217 tcttc 221  Q
    |||||    
T  52082949 tcttc 52082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 5429752 - 5429551
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa-------gacactcaatgattctct 118  Q
    ||||||||||||||||||| | |||| |||| | ||| || ||||||||||||| | ||||||||||||||||||       |||||||||||||| ||     
T  5429752 ggttacaagaaattagcttcaacaagctcacgaagaataa-ccctaatttctactcattttcccaatctcaccaatgaacaagacactcaatgattttca 5429654  T
Q  119 ctttac-aaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctc 216  Q
    ||   | ||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||||||||| | || ||||||||||||||||| ||||||    
T  5429653 ctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacttcctttgatttcccaagtttctctc 5429556  T
Q  217 tcttc 221  Q
    |||||    
T  5429555 tcttc 5429551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 5370153 - 5370382
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc--ttgacaagttcacaatgaacaaaccctaatttctacc----cttttcccaatctc 95  Q
    ||||||||||||| | ||||||||||| |||||||||||||||  ||||||||||||||| |||| ||||||||||||||||     |||| ||||||||    
T  5370153 gagttcttacaaa-gagatacaaaagggttacaagaaattagcttttgacaagttcacaaagaac-aaccctaatttctacctcttttttttccaatctc 5370250  T
Q  96 ac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagc 187  Q
    ||       ||||||||||||||||| || ||   ||| |||||| | ||||||  || ||||||||| ||| ||||||||| ||||||||||||||||     
T  5370251 accaatgaacaagacactcaatgattttcactcaccaaagtgtttacaatgtttcccagcccaagaga-actataatcaaag-accctaaaccctaaagt 5370348  T
Q  188 t-tctccctttgatttcccaagtctctctctcttc 221  Q
    | ||| ||||||||||| ||||| |||||||||||    
T  5370349 tgtct-cctttgatttctcaagtttctctctcttc 5370382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 26364334 - 26364236
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| | ||||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  26364334 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctcacca 26364237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 386
Target Start/End: Complemental strand, 31985419 - 31985236
Alignment:
Q  204 ccaagtctctctctcttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcg 301  Q
    |||||| ||||||||||| | |||  |||||||| ||||||||||||||||| | |||||| ||||  ||| |  ||||||| |||||||| || |||||    
T  31985419 ccaagtttctctctcttcaagctc--acttcaaaatctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgattt-ccaaatcg 31985323  T
Q  302 tgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt 386  Q
    ||||||||||  ||||| |||| ||||| ||||||||||||||||  | | ||||||| ||||||||| |  |||||||||| ||||    
T  31985322 tgtcacgattgatgcgtacgtcacaaggtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattt 31985236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 45356982 - 45356902
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgca 410  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||||||||||||||||    
T  45356982 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgca 45356902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 36994622 - 36994524
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| |||| |||| |||||||||||| |||||||||||||||||    
T  36994622 gagttcttacaaa-gggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacccattttcccaatctcacca 36994525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 40632543 - 40632445
Alignment:
Q  3 gagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||||| |||| ||| ||||||||||||| |||||||||||||||||    
T  40632543 gagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttctacccattttcccaatctcacca 40632446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 46147459 - 46147557
Alignment:
Q  1 aagagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| | ||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||    
T  46147459 aagagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttctacccatttttccaatctcac 46147556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 37229791 - 37229890
Alignment:
Q  3 gagttcttacaaa-agggatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    ||||||||||||| ||  ||| ||| |||||||| ||||| |||| | |||| |||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  37229791 gagttcttacaaagagatataaaaagggttacaacaaatttgctttaacaagctcacaaagaacacaccctaatttctaccattttcccaatctcaccaa 37229890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 2209812 - 2209717
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 96  Q
    ||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| ||| |||||||||||||||||| ||||||||||||||    
T  2209812 gagttcttacaaa-gagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaccctaatttctacccattttcccaatctca 2209717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 5207937 - 5208003
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatc 93  Q
    |||| ||| |||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||||    
T  5207937 ggttgcaataaattagcttcaacaagttcacaaagaacaaaccctaatttctaccctttttccaatc 5208003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36463457 - 36463557
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta-cccttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| | |||||||||||| || |||||||||||||||    
T  36463457 aagagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-agccctaatttctatccattttcccaatctcac 36463554  T
Q  98 caa 100  Q
    |||    
T  36463555 caa 36463557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 41964514 - 41964415
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 98  Q
    ||||||||||||| |||||||||||  |||||||| |||||||||| | |||| |||||| |||||| ||||||||||||||| |||||||||| |||||    
T  41964514 gagttcttacaaa-gggatacaaaatgggttacaataaattagcttaaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatttcacc 41964417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 46703599 - 46703500
Alignment:
Q  3 gagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcacc 98  Q
    ||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||| | ||||||||||||||||    
T  46703599 gagttcttacaaa-gagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctactcattttcccaatctcacc 46703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 47038496 - 47038577
Alignment:
Q  19 gatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    |||||||| | ||||||||||||||||| | |||| |||||| |||||| ||||||||||||||| ||| |||||||||||||    
T  47038496 gatacaaatgattacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttccaatctcaccaa 47038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 507
Target Start/End: Complemental strand, 8689097 - 8689044
Alignment:
Q  454 ccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 45687278 - 45687351
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||| ||||||||||||| |||||| |||||| ||||||| |||||||||| ||| ||||||||||||||||||    
T  45687278 gttataagaaattagctttgacaagctcacaaagaacaaaacctaatttcttcccattttcccaatctcaccaa 45687351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 52093885 - 52093960
Alignment:
Q  144 caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||||| |||||||||||||| |||| |||||||||| | |  ||||||||||||||||| |||||||||||    
T  52093885 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 52093960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 507
Target Start/End: Original strand, 5143807 - 5143859
Alignment:
Q  455 caaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 12073490 - 12073392
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | ||||||| |||||||||| | |||| |||||| ||||||||| |||||||||||| |||||||||||||||||    
T  12073490 gagttcttacaaa-gagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacc-taatttctacccattttcccaatctcacca 12073393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 12743995 - 12744073
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacc 81  Q
    ||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  12743995 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 12744073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 12744117 - 12744195
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacc 81  Q
    ||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  12744117 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 12744195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 12745384 - 12745462
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacc 81  Q
    ||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  12745384 gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 12745462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 12745506 - 12745604
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||| || ||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||    
T  12745506 gagttcttacaaa-gagatacaaatgggttacaagaaattagttttgacaagttcacaaagaac-aaccctaatttctacccattttcctaatctcgcca 12745603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 26175706 - 26175932
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac-- 97  Q
    ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| |||||| ||||||||||| ||| |||||||||||||||      
T  26175706 gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa-ccctaatttctccccattttcccaatctcacca 26175803  T
Q  98 -----caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
         ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||| ||| ||| ||||||||| ||||| ||| |||||| | |    
T  26175804 atgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaacaga-actttaatcaaag-accctcaactctaaagttac 26175901  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
      ||||||||||||||||| |||||||||||    
T  26175902 ctcctttgatttcccaagtttctctctcttc 26175932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 31985204 - 31985140
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||||||||||||| ||||| ||||||||| ||||| |||||||| || | |||||||||||||    
T  31985204 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaag 31985140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 54883118 - 54883020
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||  ||| ||||||||||||||||| |||||||||||||||||    
T  54883118 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttctacccattttcccaatctcacca 54883021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 12119627 - 12119540
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcacc 98  Q
    |||| ||||||||||| |||||||||||||||||  | |||||||||| ||||||||| |||||||||| | |||| |||||||||||    
T  12119627 aaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccataatttctactcttttttccaatctcacc 12119540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 16628403 - 16628353
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 16628353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 38151968 - 38151918
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 38151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 41639499 - 41639426
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  | |||||||||| |||| ||||||||||||||||| |||||||||||| |||||    
T  41639499 ggttacaagaaattagcttcaaaaagttcacaaagaac-aaccctaatttctacccattttcccaatcttaccaa 41639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 507
Target Start/End: Original strand, 3778116 - 3778165
Alignment:
Q  458 aatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 3778165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 507
Target Start/End: Original strand, 5148225 - 5148294
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||||||||||||| |   ||||||||||||| ||||| || |||||||| ||||||||||||||| ||||    
T  5148225 aaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 26699523 - 26699596
Alignment:
Q  14 aaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttt 85  Q
    |||| |||||||||| |||||||||||||||||| | |||| |||||| |||||||||||||| | ||||||||    
T  26699523 aaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatctatacccttt 26699596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 48142473 - 48142542
Alignment:
Q  28 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 96  Q
    |||||||||||| |||||| | |||| |||||| ||||||||||||||||||| | | ||||||||||||    
T  48142473 ggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatctca 48142542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 379477 - 379383
Alignment:
Q  4 agttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 97  Q
    |||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  379477 agttcttacaaa-gcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccattttctcaatctcac 379383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 4588057 - 4587958
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcacca 99  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||  ||||| | |||| ||||||| | |||||||||||  |||||||||| ||||||    
T  4588057 gagttcttacaaa-gagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaatcttaatttctaccttttttcccaatttcacca 4587959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 8665506 - 8665408
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| || ||| |||| ||||||||||||||||| |||||||| ||||||||    
T  8665506 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaac-aaccctaatttctacccattttcccattctcacca 8665409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 507
Target Start/End: Complemental strand, 5268750 - 5268699
Alignment:
Q  456 aaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 9194164 - 9194215
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttcc-ataccacaaatttgaagacaat 507  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||| ||||    
T  9194164 aaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaat 9194215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24969209 - 24969112
Alignment:
Q  4 agttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| |||||||  ||||||||||||| |||| |||||||||||||    
T  24969209 agttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-tctaatttctacccatttttccaatctcaccaa 24969112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 41639353 - 41639263
Alignment:
Q  12 caaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 100  Q
    |||||| |||||||| || |||||||||||||||||  | ||||| |||| |||| ||||||||||||||||| |||||||||||| |||||    
T  41639353 caaaagagatacaaatgggttacaagaaattagcttcaaaaagtttacaaagaac-aaccctaatttctacccattttcccaatcttaccaa 41639263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 1983309 - 1983252
Alignment:
Q  28 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccctttt 86  Q
    |||||||||||||||||||| |||| |||||| ||||||| | ||||||||| ||||||    
T  1983309 ggttacaagaaattagcttg-caagctcacaaagaacaaaacataatttctatcctttt 1983252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 6542249 - 6542349
Alignment:
Q  3 gagttcttacaaaagggatacaaaaggtta-caagaaattagcttga-caagttcacaatgaacaaaccctaatttctacc--cttttcccaatctcacc 98  Q
    ||||||||||||| | ||||||||||| || ||||||||||| || | |||| |||||| ||||||| |||||||||||||   ||||||||||||| ||    
T  6542249 gagttcttacaaa-gagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaatttctaccattttttcccaatctcccc 6542347  T
Q  99 aa 100  Q
    ||    
T  6542348 aa 6542349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 6742946 - 6742896
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| |||| |||||||||| ||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 10047932 - 10047982
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||  ||||||||||| ||||||||||||||| ||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaat 10047982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 16622824 - 16622774
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||| ||| ||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaat 16622774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 27417060 - 27417133
Alignment:
Q  28 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 100  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||| | |||| |||||||||||||    
T  27417060 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacacattttaccaatctcaccaa 27417133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 44967910 - 44967992
Alignment:
Q  14 aaagggatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctc 95  Q
    |||| |||||||| |||||||||||||| |||| | |||| || | | || |||| ||||||||||||| |||||||||||||    
T  44967910 aaagagatacaaatggttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctc 44967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 6656054 - 6655975
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc 82  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||||| |||| |||| ||||||||||||    
T  6656054 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaac-aaccttaatttctaccc 6655975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48893706 - 48893810
Alignment:
Q  1 aagagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttc----acaatgaacaaaccctaatttctaccc-ttttcccaatc 93  Q
    ||||||||||||||| | |||||||| | ||||||||||||||||||  ||||| ||    ||||||||| ||||||||||||||||| ||||| |||||    
T  48893706 aagagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaacaatgaac-aaccctaatttctacccattttctcaatc 48893803  T
Q  94 tcaccaa 100  Q
    |||||||    
T  48893804 tcaccaa 48893810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 5268955 - 5268852
Alignment:
Q  235 aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| ||||  || ||||  |||||  |||||||||||| || ||| ||||||| |||||||  ||||| || ||||||| |||    
T  5268955 aaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacg 5268856  T
Q  332 acca 335  Q
    ||||    
T  5268855 acca 5268852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 5349980 - 5349929
Alignment:
Q  31 tacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc 82  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  5349980 tacaaggaattagcttcgacaagttcacaaagaacaaa-cctaatttctaccc 5349929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 31474249 - 31474150
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||  ||||  ||| || ||||||  |||||||||||||| ||||| |||||||||||    
T  31474249 gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttctacccattttctcaatctcacca 31474151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 55085445 - 55085532
Alignment:
Q  14 aaagggatacaaaaggtt-acaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 100  Q
    |||| |||||||| |||| ||||||||||||||| | |||| |||||| |||||| || |||||||||||  ||| |||||||||||||    
T  55085445 aaagagatacaaatggtttacaagaaattagcttcaacaagctcacaaagaacaa-ccttaatttctacctattttccaatctcaccaa 55085532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 3804 - 4309
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3804 ttacaaaaggaatacaagaggttacaagaaattagcttgacatgttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 3903  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  3904 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 4000  T
Q  209 tctctctctcttccaactccc----acttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtg 303  Q
    |||||||||  |||||||| |    |||||||||||||||| |||||||| | |||||| ||||||||||| |||||||||||||||||||||||| |||    
T  4001 tctctctct--tccaactctctctcacttcaaatctgcacaggaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaattgtg 4098  T
Q  304 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccca-aatcgtgccacg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||    
T  4099 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacg 4198  T
Q  403 attttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    | ||||||||||| ||| |||||||||| |||||  ||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  4199 a-tttgcacccctgcaaccctagctcacggcacctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 4297  T
Q  502 gacaatctcaac 513  Q
    ||||||||||||    
T  4298 gacaatctcaac 4309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Complemental strand, 6363 - 5860
Alignment:
Q  9 ttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactca 108  Q
    |||||||||||||||||  | |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6363 ttacaaaagggatacaagggcttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactca 6264  T
Q  109 atgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaag 208  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | | |||||||||||||||||    
T  6263 atgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatttcccaag 6167  T
Q  209 tctctctctcttccaactcccacttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcac 307  Q
    ||||||||||||||||| | | |||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  6166 tctctctctcttccaac-ctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcac 6068  T
Q  308 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaattt--cccaaatcgtgccacgatt 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||  ||||||| ||||| |    
T  6067 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaat 5968  T
Q  406 ttgcacccctacaa-cctagctcacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagac 504  Q
    ||||| |||| ||| |||||||||| |||||   |||||||||||||  ||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  5967 ttgca-ccctgcaaccctagctcacggcacctccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac 5869  T
Q  505 aatctcaac 513  Q
    |||||||||    
T  5868 aatctcaac 5860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 3 - 502
Target Start/End: Original strand, 11231 - 11740
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttg-acaagttcacaatgaacaaaccctaatttctacccttttc--ccaatctcacc 98  Q
    ||||||||||||||| ||||||||||| |||||||||||||| ||  |||||||||||| |||||| ||||||||||||||||||||  |||||||||||    
T  11231 gagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaacaa-ccctaatttctacccttttctcccaatctcacc 11329  T
Q  99 aaga------cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    ||||      ||||||||||||  | ||   |||||||||| | |||||| | |||||||||||  ||||||||||||| || ||||||||| || | ||    
T  11330 aagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccataaaccctagagttact 11428  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacga 289  Q
    |||||||||||||||||| ||||||||||||||||| |  |||||| ||||||||||||||||| | |||||||||||| ||| |  |||||||||||||    
T  11429 ccctttgatttcccaagtttctctctcttccaactctc--ttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacga 11526  T
Q  290 ttttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttc 387  Q
    ||| ||  ||||||||||||||  ||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||| |||||    
T  11527 ttt-ccagatcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttc 11625  T
Q  388 ccaaatcgtgccacgattttgcacccctacaacctagctcacagcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttcca 486  Q
    |||||||||| |||||||| |||||| | ||| | ||||||| ||| |  |||||||||||||||| ||||| ||||||||| ||||| |||||||||||    
T  11626 ccaaatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttcca 11724  T
Q  487 taccacaaatttgaag 502  Q
     ||||||| |||||||    
T  11725 gaccacaattttgaag 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 3 - 502
Target Start/End: Original strand, 8805 - 9295
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttg-acaagttcacaatgaacaaaccctaatttctacccttttc--ccaatctcacc 98  Q
    ||||||||||||||| ||||||||||| |||||||||||||| ||  | |||||||||| |||||| ||||||||||||||||||||  |||||||||||    
T  8805 gagttcttacaaaagagatacaaaagggttacaagaaattagattttataagttcacaaagaacaa-ccctaatttctacccttttctcccaatctcacc 8903  T
Q  99 aaga------cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttct 191  Q
    ||||      ||||||||| ||  | ||   |||||| ||| | |||||| | |||||||||||  ||||||||||||| ||||||| |||| || | ||    
T  8904 aagaacaagacactcaatggtttacactcaccaaggtctttacaatgtttcccaacccaagagaagctctaatcaaaga-ccctaaagcctagagttact 9002  T
Q  192 ccctttgatttcccaagtctctctctcttccaactcccacttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacga 289  Q
    |||||||||||||||||| ||||||||||||||||| |  |||||| ||||||||||||||||| | |||||||||||| ||| |  ||               
T  9003 ccctttgatttcccaagtttctctctcttccaactctc--ttcaaaatctgcacaagaacacttaaatactagccttccactgat--aa----------- 9087  T
Q  290 ttttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttc 387  Q
           |||||||||||||||  ||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||| |||||    
T  9088 -------aatcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttc 9180  T
Q  388 ccaaatcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttcca 486  Q
    ||||||| || |||||||| |||||| | ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||| |||||||||||    
T  9181 ccaaatcatgtcacgatttggcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttcca 9279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 113; Significance: 6e-57; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 14 - 474
Target Start/End: Complemental strand, 1004 - 523
Alignment:
Q  14 aaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcaccaaga------c 103  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||      |    
T  1004 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttttcccaatctcaccaagaacaagac 906  T
Q  104 actcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgattt 202  Q
    ||||||||||| || ||   |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | || ||||||||||    
T  905 actcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgctgcctttgattt 808  T
Q  203 cccaagtctctctctcttccaactc--cca-------cttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgatt 291  Q
    ||||||| ||||||||||| | |||  |||       || |||| ||||||||||||||||| | |||||| ||||| ||| |  |||||||||||||||    
T  807 cccaagtttctctctcttctagctcatccaagctctcctccaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt 708  T
Q  292 ttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttccc 389  Q
    | || ||||||||||| ||| |  ||| |||| ||||| ||||||||||| ||||  ||| ||||||||||||| ||| |  |||||||||| ||| | |    
T  707 t-ccaaatcgtgtcacaattggtacgtacgtcacaaggtacgaccagtccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctc 609  T
Q  390 aa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttc 474  Q
    || |||||| |||||||| |||||| | ||| ||||||||| ||| | ||||||||||||||||| ||||| ||||||||| |||||    
T  608 aagatcgtgtcacgatttggcaccc-tgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 150 - 501
Target Start/End: Complemental strand, 22286 - 21953
Alignment:
Q  150 aagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttccaactcccacttcaaatctgcacaagaa 249  Q
    |||||| |||||||||||||| |||||||||||| || | |||||||||||||||||||| ||||||||||| | ||| | |||||||||||||||||||    
T  22286 aagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaagtttctctctcttctagctcac-cttcaaatctgcacaagaa 22189  T
Q  250 cactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaagg 348  Q
    |||||  ||||||||||||| ||| |  |||||||||||||||                    | ||| |||| ||||| |||||| ||||||||||  |    
T  22188 cacttaaatactagccttccactgataaaatcgtgtcacgatt------------------ggtacgtacgtcacaaggtacgacctgtccttatcagtg 22107  T
Q  349 atacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgt 446  Q
    ||||||||||||||||||| || |||||||||| ||||||||| |||||| |||||||| ||   ||| ||| ||||||||| ||||| |||||||||||    
T  22106 atacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggc-gtcctgcaaactagctcacggcacctcgaaatcgtgt 22008  T
Q  447 cacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaa 501  Q
    |||||| ||||| || |||| | ||||| ||||||||||| ||||||||||||||    
T  22007 cacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaa 21953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 11655 - 11557
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcacca 99  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||| |||||||||||||    
T  11655 gagttcttacaaa-gagatacaaatgagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccatttttcccaatctcacca 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 297 - 502
Target Start/End: Complemental strand, 17652 - 17444
Alignment:
Q  297 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-at 393  Q
    ||||||||||||||| |  ||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||| |  ||| |||||| ||||||||| ||    
T  17652 aatcgtgtcacgattggaacgtacgtcacaaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagat 17553  T
Q  394 cgtgccacgattttgcacccctacaacctagctcacagcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccac 492  Q
    |||| |||||||| |||||| | ||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| |||||    
T  17552 cgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccac 17454  T
Q  493 aaatttgaag 502  Q
    ||||||||||    
T  17453 aaatttgaag 17444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 434631 - 434405
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt--cccaatctcacc 98  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||||||    
T  434631 gagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttccccaatctcacc 434534  T
Q  99 aa-------gacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctaaagcttc 190  Q
    ||       |||||||||||||| || ||   |||||| ||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||||| | |    
T  434533 aatgaacaagacactcaatgattttcactcaccaaggtatttaccatgttttccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgc 434436  T
Q  191 tccctttgatttcccaagtctctctctcttc 221  Q
    | ||||||||||||||||| |||||||||||    
T  434435 ttcctttgatttcccaagtttctctctcttc 434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 761 - 944
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||| ||    ||| | ||||||    
T  761 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 860  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
     |||||   |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||    
T  861 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaac 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 255 - 513
Target Start/End: Complemental strand, 3597 - 3338
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatact 353  Q
    |||||||| ||||| |||  | ||||||||||||||||||| | ||||||||||||| |||  | ||||| |||   ||| |||||||||||  ||||||    
T  3597 tatactagtcttcccctgaagaaatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggtt-gactagtccttatcattgatact 3499  T
Q  354 taacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc-acccgaaatcgtgtcacga 451  Q
    |||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  || | ||| ||||||||| || ||  |||||||||||||||    
T  3498 taacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctt-caaactagctcacggccacttgaaatcgtgtcacga 3400  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |  |||||||||||||| ||||| || |||||||| ||||||||||||||| |||| |||||    
T  3399 tgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaatatcaac 3338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 513
Target Start/End: Complemental strand, 34814 - 34555
Alignment:
Q  255 tatactagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatact 353  Q
    |||||||| |||||||||  | ||| ||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||||||||||  ||||||    
T  34814 tatactagtcttcctctgaagaaatagtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatact 34716  T
Q  354 taacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcacagc-acccgaaatcgtgtcacga 451  Q
    |||||||||||||||   |||||||||| ||||||||| ||||||||||||||| ||  |  | ||| | | || || || ||  ||||| |||||||||    
T  34715 taacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtca-tgcaaacaaactaacggccacttgaaatagtgtcacga 34617  T
Q  452 taccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    | ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  34616 tgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 34555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 1784 - 1710
Alignment:
Q  439 aatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaac 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 507
Target Start/End: Complemental strand, 2025 - 1746
Alignment:
Q  231 cttcaaatctgcacaagaacactttata--ctagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaagg 327  Q
    ||||||||  ||||||||||||||||||  |||| | | | |||  | |||||||||||||||| || | ||||||||||||| |||  | |||||||||    
T  2025 cttcaaataagcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaagg 1926  T
Q  328 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagct 426  Q
       |||||||||||||||  || ||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| | |||    
T  1925 tt-gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggct 1827  T
Q  427 cacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||| ||  ||   |||||||||||||  | |||||||| ||| ||| | ||||||||||| ||||| ||||||||| ||||    
T  1826 cactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 507
Target Start/End: Complemental strand, 148730 - 148451
Alignment:
Q  231 cttcaaatctgcacaagaacactttata--ctagccttcctctgttgcaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaagg 327  Q
    ||||||||  ||||||||||||||||||  |||| | | | |||  | |||||||||||||||| || | ||||||||||||| |||  | |||||||||    
T  148730 cttcaaataagcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaagg 148631  T
Q  328 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagct 426  Q
       |||||||||||||||  || ||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| | |||    
T  148630 tt-gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggct 148532  T
Q  427 cacagcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||| ||  ||   |||||||||||||  | |||||||| ||| ||| | ||||||||||| ||||| ||||||||| ||||    
T  148531 cactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 114700 - 114602
Alignment:
Q  3 gagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctttt-cccaatctcacca 99  Q
    ||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||||||||| |||||||||||||    
T  114700 gagttcttacaaa-gagatacaaaagcgttacaagaaattagctttgacaagttcacaaagaacaa-ccttaatttctaccctttttcccaatctcacca 114603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 102513 - 102450
Alignment:
Q  19 gatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 82  Q
    |||||||| |||||||||||||||| ||| | ||| ||||||  |||||||||||||||||||||    
T  102513 gatacaaagaggttacaagaaattatcttaa-aagctcacaaaaaacaaaccctaatttctaccc 102450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 9e-19; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 132829 - 132761
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaa 506  Q
    |||||||| |||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  132829 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaa 132761  T

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Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 6252 - 6302
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

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Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 3060 - 3110
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    |||||||||||  ||||| ||||||||||| ||||||||||||||| ||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

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Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 2835 - 2938
Alignment:
Q  235 aaatctgcacaagaacactt-tatactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 331  Q
    |||||||||||||||||||| ||||  || ||||  |||||  |||||||||||| || ||| ||||||| |||||||  ||||| || ||||||| |||    
T  2835 aaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacg 2934  T
Q  332 acca 335  Q
    ||||    
T  2935 acca 2938  T

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Target: scaffold0197 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 13968 - 13791
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| ||||||||    
T  13968 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 13869  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||  ||   ||||||||||||   |||||||||| ||| ||| | ||||||| ||| ||||| ||||||||| ||||    
T  13868 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 13791  T

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Target: scaffold0197; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 409
Target Start/End: Complemental strand, 18880 - 18769
Alignment:
Q  298 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgt 396  Q
    |||||||||||||||||  | ||||| ||| | |||||||| ||||||  |||||||||| ||||||||||   |||||||||| ||||||||| |||||    
T  18880 atcgtgtcacgatttgcaacggtccccagg-atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18782  T
Q  397 gccacgattttgc 409  Q
    | |||||||||||    
T  18781 ggcacgattttgc 18769  T

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Target: scaffold0009 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 176634 - 176457
Alignment:
Q  331 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattttgcacccctacaacctagctcac 429  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||  ||    ||| ||||||||    
T  176634 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 176535  T
Q  430 agcacccgaaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
     ||  ||   ||||||||||||   |||||||||| ||| ||| | ||||||| ||| ||||| ||||||||| ||||    
T  176534 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 176457  T

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Target: scaffold0510 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 1160 - 1096
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||||||||||||| ||||||||||||||| ||||  |||||||| || |||||||||||||||    
T  1160 aaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 1096  T

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Target: scaffold0140 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 7988 - 7924
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||||||||||||| ||||| ||||||||| ||||| |||||||| || |||||||||||||||    
T  7988 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 7924  T

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Target: scaffold0665 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 8112 - 8184
Alignment:
Q  335 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacaatttcccaa-atcgtgccacgattt 406  Q
    |||||||||||  |||||||||||||||||||||   |||||||||| |||| |||| |||||||||||||||    
T  8112 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgattt 8184  T

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Target: scaffold0665; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 513
Target Start/End: Original strand, 8216 - 8272
Alignment:
Q  457 aaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaatctcaac 513  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaac 8272  T

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Target: scaffold0087 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 43511 - 43447
Alignment:
Q  438 aaatcgtgtcacgataccaaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    ||||||||||||||| ||| ||||||||||| ||||| || |||||||| |||| ||||||||||    
T  43511 aaatcgtgtcacgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaag 43447  T

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Target: scaffold0087; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 507
Target Start/End: Complemental strand, 36384 - 36332
Alignment:
Q  455 caaaatcgtgtcacaatttccctgttcttccataccacaaatttgaagacaat 507  Q
    ||||||||| |||  ||||| ||||||||||| ||||||||||||||| ||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaat 36332  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20483 - 20583
Alignment:
Q  1 aagagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac-ccttttcccaatctcac 97  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||  ||||||||||||  |||||| |||||||||| | | |||||||||||||||    
T  20483 aagagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaa-cctaatttctgctcattttcccaatctcac 20580  T
Q  98 caa 100  Q
    |||    
T  20581 caa 20583  T

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Target: scaffold0066; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 20636 - 20711
Alignment:
Q  144 caacccaagagatactctaatcaaagaaccctaaaccctaaagcttctccctttgatttcccaagtctctctctcttc 221  Q
    |||||||||| | |||||||||||||| |||| |||||||||| | |  |||||||||||| |||| |||||||||||    
T  20636 caacccaagata-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttccaaagtttctctctcttc 20711  T

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Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 18099 - 18171
Alignment:
Q  29 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 100  Q
    ||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||  |||||||| |||||||||    
T  18099 gttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttctaccaattttcccactctcaccaa 18171  T

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Target: scaffold0466 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 7425 - 7327
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacca 99  Q
    ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| |||| |||||||||||| |||| ||||||||||||    
T  7425 gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacccatttttccaatctcacca 7328  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 80353 - 80447
Alignment:
Q  3 gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 96  Q
    |||||||||||||| | ||||||| || || |||||||||||||| | |||| |||||| |||||| ||||||||||||||| ||||||||||||||    
T  80353 gagttcttacaaaaag-atacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctca 80447  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Original strand, 45744 - 45791
Alignment:
Q  455 caaaatcgtgtcacaatttccctgttcttccataccacaaatttgaag 502  Q
    |||||| ||||||| ||||| ||||||||||| |||||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaag 45791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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