View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14210_high_24 (Length: 319)
Name: NF14210_high_24
Description: NF14210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14210_high_24 |
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Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 35734731 - 35735038
Alignment:
| Q |
2 |
taaacaaccttaaaaaatgcaataacaaatgacacaaattagaatacaagttttaggagtcttgatgaagtcaatattctacttctgagtttccaaaata |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35734731 |
taaacaaccttaaaaaatgcaataacaaatgacacaaattagaatacaagttttaggagtcttgatgaagtcaatattctacttctgagtttccaaaata |
35734830 |
T |
|
| Q |
102 |
tgcaacgaaaaagttagaagtctgtgtttccagttagttttcggtggctatctcactttaagtgtgcttgtctctccgccattggttaccatataaactt |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35734831 |
tgcaacgaaaaagttagaagtctgtgtttccagttagttttcggtggctatctcactttaagtgtgcttgtctctccgccattggttaccatataaactt |
35734930 |
T |
|
| Q |
202 |
gccttttccatgtctaattggcagtccaatcccaccattgaaaccaaaatgaaagatctgtaggactttcaaatttcaaattattaggatattcacaccc |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
35734931 |
gccttttccatgtctaattggcagtccaatcccaccattgaaaccaaaatgaaagatctgaaggactttcaaatttcaaattattaggatattcacaccc |
35735030 |
T |
|
| Q |
302 |
tacctatg |
309 |
Q |
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|||||||| |
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| T |
35735031 |
tacctatg |
35735038 |
T |
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