View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14210_high_30 (Length: 306)
Name: NF14210_high_30
Description: NF14210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14210_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 31836332 - 31836627
Alignment:
| Q |
1 |
gcttactgtcctgccaataagcaagttgctgatgttttgacaaaggctttgaagactgaccagtttgcaaggctaagaagagaacttggagttgtatcat |
100 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31836332 |
gcttactgtcctgccaataagcaagttgcttatgttttgacaaaggctttgaagactgaccagtttgcaaggctaagaagagaacttggagttgtatcat |
31836431 |
T |
|
| Q |
101 |
ttttgttgtgattttgtattaagggatggtgttgtaagtaatacgaaaccaattcagtttttacagttagtaattcagttagtgtaactgataatttgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31836432 |
ttttgttgtgattttgtattaagggatggtgttgtaagtaatacgaaaccaattcagtttttacagttagtaattcagttagtgtaactgataatttgtt |
31836531 |
T |
|
| Q |
201 |
acatagcagttcatataaataagtactagttgcactatgtagtatttgtgagaaattaataaaagttctcaagcttccctaatctctttctctctg |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31836532 |
acatagcagttcatataaataagtactagttgcactatgtagtgtgtgtgagaaattaataaaagttctcaagcttccctaatctctttctctctg |
31836627 |
T |
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