View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14210_high_32 (Length: 301)

Name: NF14210_high_32
Description: NF14210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14210_high_32
NF14210_high_32
[»] chr4 (34 HSPs)
chr4 (1-294)||(7582602-7582895)
chr4 (6-287)||(15165076-15165357)
chr4 (11-288)||(13909168-13909445)
chr4 (100-281)||(17710086-17710267)
chr4 (11-204)||(8969324-8969517)
chr4 (98-267)||(13692280-13692449)
chr4 (10-200)||(11933730-11933920)
chr4 (11-198)||(22173149-22173336)
chr4 (11-281)||(22357048-22357317)
chr4 (106-278)||(4615119-4615288)
chr4 (102-267)||(11253305-11253471)
chr4 (11-205)||(14649207-14649401)
chr4 (118-289)||(17107010-17107182)
chr4 (35-204)||(5679542-5679711)
chr4 (54-205)||(17275909-17276060)
chr4 (100-197)||(19092696-19092793)
chr4 (102-222)||(25094936-25095050)
chr4 (100-181)||(17217154-17217235)
chr4 (11-203)||(25120823-25121015)
chr4 (98-226)||(19929245-19929373)
chr4 (109-156)||(17026007-17026054)
chr4 (195-286)||(17025891-17025982)
chr4 (26-92)||(9851146-9851212)
chr4 (33-78)||(17107009-17107054)
chr4 (28-97)||(30600166-30600235)
chr4 (12-237)||(17672306-17672532)
chr4 (103-166)||(39042183-39042246)
chr4 (11-92)||(19374518-19374600)
chr4 (13-67)||(23652044-23652098)
chr4 (29-82)||(11520910-11520963)
chr4 (35-76)||(25094953-25094994)
chr4 (140-204)||(5956396-5956460)
chr4 (29-109)||(9264704-9264783)
chr4 (32-80)||(26115540-26115588)
[»] chr7 (62 HSPs)
chr7 (1-294)||(8978507-8978800)
chr7 (5-286)||(39272685-39272966)
chr7 (98-281)||(11803400-11803583)
chr7 (102-281)||(17190753-17190932)
chr7 (118-289)||(1847820-1847991)
chr7 (98-288)||(20582588-20582778)
chr7 (105-226)||(13289018-13289139)
chr7 (100-288)||(18368556-18368744)
chr7 (106-288)||(8877761-8877943)
chr7 (17-226)||(2574252-2574460)
chr7 (102-281)||(22066784-22066964)
chr7 (100-278)||(17077443-17077621)
chr7 (9-214)||(5106952-5107154)
chr7 (102-222)||(16058610-16058730)
chr7 (128-281)||(8053646-8053799)
chr7 (14-172)||(7318589-7318748)
chr7 (11-198)||(17152749-17152936)
chr7 (100-281)||(15869997-15870179)
chr7 (11-198)||(10586625-10586813)
chr7 (98-282)||(13759481-13759665)
chr7 (102-236)||(9574796-9574930)
chr7 (98-198)||(3734995-3735095)
chr7 (133-276)||(4449367-4449511)
chr7 (55-181)||(19153645-19153771)
chr7 (55-181)||(20753044-20753170)
chr7 (100-279)||(1861292-1861471)
chr7 (125-183)||(4986936-4986994)
chr7 (125-183)||(4991034-4991092)
chr7 (118-289)||(6042865-6043042)
chr7 (11-226)||(6013904-6014118)
chr7 (44-197)||(1586309-1586462)
chr7 (128-215)||(13277899-13277987)
chr7 (22-226)||(1584868-1585064)
chr7 (11-183)||(16297456-16297627)
chr7 (6-76)||(1847949-1848019)
chr7 (11-76)||(4986906-4986971)
chr7 (11-76)||(4991004-4991069)
chr7 (35-92)||(7397478-7397535)
chr7 (29-82)||(9864043-9864096)
chr7 (100-193)||(13418856-13418949)
chr7 (11-199)||(18202809-18202996)
chr7 (98-198)||(3190660-3190760)
chr7 (185-264)||(3329177-3329256)
chr7 (118-160)||(9864049-9864091)
chr7 (34-76)||(11803420-11803462)
chr7 (29-82)||(16223858-16223911)
chr7 (11-67)||(18662749-18662806)
chr7 (29-82)||(21501594-21501647)
chr7 (30-82)||(8293757-8293809)
chr7 (35-79)||(16058669-16058713)
chr7 (29-92)||(31493257-31493320)
chr7 (6-182)||(9131218-9131393)
chr7 (37-78)||(3329280-3329321)
chr7 (35-76)||(3735016-3735057)
chr7 (29-82)||(5530347-5530400)
chr7 (119-160)||(7397478-7397519)
chr7 (35-76)||(13289084-13289125)
chr7 (118-151)||(18662773-18662806)
chr7 (47-92)||(21232815-21232860)
chr7 (138-226)||(1587971-1588059)
chr7 (11-75)||(17829880-17829944)
chr7 (134-198)||(22339010-22339074)
[»] chr6 (36 HSPs)
chr6 (6-289)||(20144611-20144894)
chr6 (6-289)||(22187945-22188228)
chr6 (11-281)||(11177246-11177516)
chr6 (6-222)||(14072394-14072610)
chr6 (102-286)||(23008941-23009125)
chr6 (102-286)||(23779239-23779423)
chr6 (130-288)||(14722362-14722520)
chr6 (100-281)||(22813280-22813462)
chr6 (98-284)||(9517116-9517304)
chr6 (11-204)||(19244888-19245081)
chr6 (103-286)||(11136282-11136465)
chr6 (118-289)||(14637972-14638144)
chr6 (11-166)||(28933290-28933445)
chr6 (102-280)||(20005456-20005635)
chr6 (11-204)||(22568150-22568344)
chr6 (11-197)||(21907747-21907934)
chr6 (109-275)||(27124089-27124255)
chr6 (110-281)||(6630207-6630378)
chr6 (11-281)||(21688368-21688638)
chr6 (110-286)||(17382380-17382557)
chr6 (113-286)||(22412591-22412768)
chr6 (5-281)||(1635270-1635546)
chr6 (135-289)||(5625074-5625228)
chr6 (13-237)||(15466679-15466903)
chr6 (166-289)||(17823282-17823404)
chr6 (189-288)||(24478762-24478861)
chr6 (33-78)||(14637971-14638016)
chr6 (10-93)||(20002092-20002175)
chr6 (29-92)||(2587033-2587096)
chr6 (35-76)||(11136298-11136339)
chr6 (138-226)||(18074987-18075076)
chr6 (29-81)||(9276986-9277038)
chr6 (98-157)||(17826806-17826865)
chr6 (144-198)||(8245371-8245425)
chr6 (35-76)||(22813402-22813443)
chr6 (229-289)||(14072707-14072767)
[»] scaffold0054 (1 HSPs)
scaffold0054 (6-289)||(72337-72620)
[»] chr3 (32 HSPs)
chr3 (6-273)||(19908617-19908884)
chr3 (6-226)||(3115990-3116210)
chr3 (102-278)||(19167778-19167954)
chr3 (100-289)||(12411479-12411668)
chr3 (102-288)||(20023085-20023270)
chr3 (6-226)||(5508643-5508862)
chr3 (149-288)||(8170276-8170415)
chr3 (109-191)||(4650613-4650695)
chr3 (9-226)||(16221671-16221886)
chr3 (102-293)||(8882658-8882850)
chr3 (30-236)||(2723406-2723612)
chr3 (142-272)||(16229568-16229698)
chr3 (104-236)||(17156194-17156326)
chr3 (11-204)||(8143924-8144117)
chr3 (100-161)||(934373-934434)
chr3 (98-154)||(8765483-8765539)
chr3 (159-288)||(19575769-19575898)
chr3 (11-75)||(38083869-38083933)
chr3 (29-75)||(21325669-21325715)
chr3 (55-204)||(8446176-8446324)
chr3 (131-183)||(8319395-8319447)
chr3 (98-154)||(8770385-8770441)
chr3 (35-76)||(934392-934433)
chr3 (134-281)||(21302352-21302500)
chr3 (104-152)||(27413565-27413613)
chr3 (209-288)||(16245237-16245316)
chr3 (32-82)||(18736389-18736439)
chr3 (55-109)||(22245659-22245712)
chr3 (29-82)||(821231-821284)
chr3 (35-76)||(4650623-4650664)
chr3 (33-82)||(8556849-8556898)
chr3 (118-159)||(21325674-21325715)
[»] chr2 (35 HSPs)
chr2 (6-275)||(28928951-28929220)
chr2 (104-294)||(17743050-17743240)
chr2 (98-284)||(27908702-27908888)
chr2 (6-226)||(19199739-19199958)
chr2 (6-205)||(13776642-13776841)
chr2 (100-286)||(30411999-30412185)
chr2 (130-281)||(18121804-18121955)
chr2 (98-290)||(17675206-17675398)
chr2 (102-293)||(26667678-26667869)
chr2 (100-272)||(22379069-22379242)
chr2 (102-242)||(25530818-25530958)
chr2 (102-288)||(24090469-24090656)
chr2 (100-290)||(17635352-17635542)
chr2 (29-195)||(29849658-29849824)
chr2 (103-225)||(23933225-23933347)
chr2 (102-272)||(25535643-25535813)
chr2 (14-196)||(20174240-20174422)
chr2 (107-288)||(17198243-17198425)
chr2 (128-286)||(29143312-29143470)
chr2 (11-204)||(29027809-29028002)
chr2 (185-289)||(27541419-27541523)
chr2 (41-237)||(25885022-25885218)
chr2 (133-281)||(28605688-28605836)
chr2 (185-288)||(25536314-25536417)
chr2 (174-288)||(25536009-25536123)
chr2 (119-182)||(32085798-32085861)
chr2 (29-82)||(21078342-21078395)
chr2 (43-76)||(26667703-26667736)
chr2 (109-237)||(23011325-23011453)
chr2 (29-88)||(17890267-17890326)
chr2 (34-76)||(24090598-24090640)
chr2 (35-76)||(23933290-23933331)
chr2 (195-288)||(25530970-25531063)
chr2 (36-76)||(18121925-18121965)
chr2 (29-109)||(45621571-45621651)
[»] chr1 (50 HSPs)
chr1 (11-288)||(16179317-16179594)
chr1 (98-289)||(15543544-15543735)
chr1 (14-251)||(25404043-25404280)
chr1 (102-288)||(18735781-18735968)
chr1 (101-288)||(21985535-21985722)
chr1 (11-288)||(14779861-14780138)
chr1 (100-288)||(18528769-18528957)
chr1 (100-288)||(21334294-21334482)
chr1 (11-288)||(21449391-21449668)
chr1 (108-288)||(14781398-14781578)
chr1 (6-266)||(15812685-15812945)
chr1 (106-226)||(16916541-16916659)
chr1 (14-226)||(33190991-33191203)
chr1 (114-281)||(26612595-26612762)
chr1 (104-289)||(18830853-18831039)
chr1 (22-226)||(26648611-26648814)
chr1 (119-281)||(9787479-9787641)
chr1 (29-266)||(44795701-44795938)
chr1 (109-288)||(727844-728024)
chr1 (104-287)||(24054350-24054533)
chr1 (11-237)||(18100574-18100800)
chr1 (100-278)||(18826023-18826202)
chr1 (98-278)||(15160057-15160237)
chr1 (11-198)||(24281586-24281773)
chr1 (125-198)||(16112163-16112236)
chr1 (19-123)||(21972066-21972169)
chr1 (102-217)||(23180165-23180280)
chr1 (110-279)||(25403632-25403802)
chr1 (102-281)||(22623271-22623451)
chr1 (98-267)||(29242837-29243006)
chr1 (11-204)||(15807613-15807807)
chr1 (6-91)||(23037716-23037801)
chr1 (139-224)||(24214962-24215047)
chr1 (98-281)||(22664560-22664743)
chr1 (100-226)||(25960739-25960865)
chr1 (32-77)||(16360288-16360333)
chr1 (29-82)||(24267500-24267553)
chr1 (29-82)||(34481272-34481325)
chr1 (118-196)||(16360290-16360368)
chr1 (29-75)||(28008435-28008481)
chr1 (119-182)||(17359499-17359562)
chr1 (34-76)||(15543673-15543715)
chr1 (34-76)||(18830867-18830909)
chr1 (11-116)||(24214845-24214950)
chr1 (35-76)||(727854-727895)
chr1 (11-76)||(16112133-16112198)
chr1 (35-76)||(26612716-26612757)
chr1 (29-82)||(27117436-27117489)
chr1 (32-80)||(15299417-15299465)
chr1 (35-79)||(25960802-25960846)
[»] chr5 (33 HSPs)
chr5 (11-226)||(20744239-20744455)
chr5 (100-288)||(24659559-24659747)
chr5 (98-281)||(34128968-34129152)
chr5 (113-288)||(19008089-19008264)
chr5 (102-288)||(24140816-24141001)
chr5 (102-288)||(20563662-20563848)
chr5 (106-288)||(20549250-20549432)
chr5 (130-288)||(24243545-24243702)
chr5 (100-280)||(17432214-17432394)
chr5 (119-289)||(19051753-19051924)
chr5 (98-274)||(15375480-15375656)
chr5 (11-236)||(24265033-24265258)
chr5 (11-236)||(24341664-24341889)
chr5 (109-281)||(16523113-16523288)
chr5 (11-279)||(34487945-34488213)
chr5 (105-226)||(17314705-17314826)
chr5 (8-222)||(18938053-18938266)
chr5 (102-275)||(28665143-28665317)
chr5 (118-286)||(23335964-23336132)
chr5 (110-237)||(18207827-18207954)
chr5 (29-109)||(17474336-17474415)
chr5 (102-197)||(20859054-20859149)
chr5 (32-82)||(36175548-36175598)
chr5 (55-92)||(26314075-26314112)
chr5 (32-197)||(36175465-36175629)
chr5 (35-78)||(19051753-19051796)
chr5 (211-286)||(20315031-20315106)
chr5 (35-76)||(15375594-15375635)
chr5 (118-203)||(17470868-17470953)
chr5 (35-76)||(19008217-19008258)
chr5 (35-76)||(24659687-24659728)
chr5 (33-77)||(19002361-19002405)
chr5 (44-76)||(20549378-20549410)
[»] scaffold0034 (2 HSPs)
scaffold0034 (103-288)||(76788-76973)
scaffold0034 (35-76)||(76804-76845)
[»] chr8 (31 HSPs)
chr8 (100-288)||(24113863-24114051)
chr8 (100-286)||(25226467-25226653)
chr8 (98-275)||(17509569-17509746)
chr8 (100-288)||(24110249-24110437)
chr8 (100-288)||(18448120-18448308)
chr8 (125-288)||(17996915-17997077)
chr8 (128-294)||(29381864-29382031)
chr8 (100-281)||(24723175-24723357)
chr8 (11-219)||(19787045-19787253)
chr8 (100-199)||(17101573-17101672)
chr8 (139-288)||(23892744-23892894)
chr8 (102-199)||(24269931-24270028)
chr8 (14-172)||(14528454-14528612)
chr8 (102-276)||(19264412-19264587)
chr8 (11-204)||(7983883-7984074)
chr8 (29-198)||(23867637-23867805)
chr8 (140-288)||(26831901-26832050)
chr8 (98-242)||(37528313-37528457)
chr8 (57-281)||(25181979-25182203)
chr8 (108-163)||(16404288-16404343)
chr8 (9-210)||(6885269-6885470)
chr8 (137-226)||(28276367-28276456)
chr8 (6-95)||(28276460-28276548)
chr8 (31-82)||(5052644-5052695)
chr8 (41-76)||(17101612-17101647)
chr8 (29-204)||(30121748-30121922)
chr8 (11-92)||(24645151-24645233)
chr8 (35-76)||(18448248-18448289)
chr8 (41-76)||(25226492-25226527)
chr8 (46-74)||(9642224-9642252)
chr8 (11-75)||(34497427-34497491)
[»] scaffold0671 (2 HSPs)
scaffold0671 (102-288)||(812-998)
scaffold0671 (35-76)||(829-870)
[»] scaffold0040 (1 HSPs)
scaffold0040 (138-288)||(26252-26402)
[»] scaffold0024 (1 HSPs)
scaffold0024 (11-280)||(39897-40165)
[»] scaffold0019 (2 HSPs)
scaffold0019 (6-222)||(181279-181494)
scaffold0019 (6-222)||(163672-163887)
[»] scaffold0638 (1 HSPs)
scaffold0638 (135-294)||(325-485)
[»] scaffold0062 (1 HSPs)
scaffold0062 (109-277)||(42748-42916)
[»] scaffold0063 (1 HSPs)
scaffold0063 (98-197)||(51193-51292)
[»] scaffold0005 (1 HSPs)
scaffold0005 (11-205)||(167891-168085)
[»] scaffold0035 (2 HSPs)
scaffold0035 (100-226)||(70239-70365)
scaffold0035 (35-76)||(70258-70299)
[»] scaffold0032 (1 HSPs)
scaffold0032 (100-214)||(103809-103923)
[»] scaffold0056 (1 HSPs)
scaffold0056 (100-276)||(21643-21820)
[»] scaffold1869 (1 HSPs)
scaffold1869 (100-226)||(27-153)
[»] scaffold0008 (1 HSPs)
scaffold0008 (84-281)||(55246-55442)
[»] scaffold0263 (1 HSPs)
scaffold0263 (100-178)||(15980-16058)
[»] scaffold0957 (1 HSPs)
scaffold0957 (118-244)||(3560-3686)
[»] scaffold0103 (1 HSPs)
scaffold0103 (175-288)||(27515-27628)
[»] scaffold0043 (1 HSPs)
scaffold0043 (29-82)||(89570-89623)
[»] scaffold0238 (2 HSPs)
scaffold0238 (29-82)||(19439-19492)
scaffold0238 (128-160)||(19454-19486)
[»] scaffold0002 (1 HSPs)
scaffold0002 (133-208)||(96420-96495)
[»] scaffold0427 (1 HSPs)
scaffold0427 (11-72)||(2543-2605)
[»] scaffold0006 (1 HSPs)
scaffold0006 (29-82)||(222750-222803)
[»] scaffold0502 (1 HSPs)
scaffold0502 (5-73)||(394-461)


Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 7582602 - 7582895
Alignment:
Q  1 gttcagacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttct 100  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  7582602 gttcggacgtttctaacctagtcggtcatcaagttgcacatgttgatcgcacaatgatccttacgtgcggggtcttactctcccagttgattataggtct 7582701  T
Q  101 atccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggca 200  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||     
T  7582702 atccctccgatggctaattgcacctgctgatcgcacggtgatccttacgtgcggggtcttgctaattcaaagttaattgaaacataaacttaaattggcg 7582801  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctctgctc 294  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7582802 ttccagttattcccaaggcaatgaaggtcaatgttccattagttcaacccatttatgaatcttaggacactcatagcacaccctctctctgctc 7582895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 6 - 287
Target Start/End: Original strand, 15165076 - 15165357
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    ||||||||||| ||||||  || | ||||||||| || |||| |||| |||||||| || | |||||||||||||||| |||||||||||| | ||||||    
T  15165076 gacgtttctaatctagtcaatccttaagttgcacctgatgattgcactgtgatcctaacctacggggtcttactctcctagttgattataggtttatccc 15165175  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    || ||||| ||| ||||| || |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||    
T  15165176 tcagatggttaactgcacctgctgatcgcacgatgatccttacgtgcggggtcttgctaattcaaaggtaattgaaacataaaattaaattggcattcca 15165275  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctc 287  Q
    |||||| ||||||||||||||  ||| |||||||| ||||||| ||  |||||||||||||| |||||||||||||||||||    
T  15165276 gttttttccaaggcaatgaaggccaaggttccatttgttcagcacatctatgaatcttaggacactcatagcacaccctctc 15165357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 13909168 - 13909445
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||||||||| || ||||||||| |||||||||| ||| ||||||| |||| || | ||||||| ||| | |||||||||     
T  13909168 ttctaacctagtcggttttcaagttgcacctgttgatcgcacggtgatccttaagtgtggggtctatactgtctccgttgatt-taggtatatccctcca 13909266  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    ||| |||||||||| || ||| | ||   ||||||||||||||||||||||| || ||||||| |||||||||| || |||||||| | ||||||||| |    
T  13909267 atgtctaattgcacttgctgaccacataatgatccttacgtgcggggtcttgttaattcaaaggtaattgaaacgtagacttaaatcgacattccagtgt 13909366  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||||| | |||||  ||||||||| || |||||||| |  |||||||||||||| ||||||||||||||||||||    
T  13909367 ttcccaaggtactgaaggccaatgttccctttgttcagccaatctatgaatcttaggacactcatagcacaccctctct 13909445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 17710086 - 17710267
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||  |    
T  17710086 tatccctccgatggctaactgcacctgttgatcgcacggtgatccttaagtgcggggtcttgctaattcaaaggtaattgaaacataaacttaaatttac 17710185  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
     ||||||| ||||||||||||||||||  ||| ||||| |||| || |||||  |||||||||||||| ||||||| |||||    
T  17710186 tttccagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccatatatgaatcttaggacactcataacacac 17710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 8969517 - 8969324
Alignment:
Q  11 ttctaacctagtcggt-catcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    |||||||||||||||| | ||||||||||| || ||||| |||| ||||||||||||||||||  |||||||| ||| ||||| ||| | |||||||||     
T  8969517 ttctaacctagtcggttcgtcaagttgcacctgttgatcacacaatgatccttacgtgcggggctttactctctcagatgatt-taggtatatccctcca 8969419  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    ||||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||| ||||||| ||||| |||| || |||| ||||||| ||||    
T  8969418 atggctagttgcacctgttgatcgtacggtgatccttacgtgtggggtcttactaattcaaaggtaattcaaacatagacttcaattggcgttcc 8969324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 13692449 - 13692280
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||||||||||||| | ||| |  |||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  13692449 tctatccctccgatggctaactccacctactgatcgcacggtgatccttatgtgcggggtcttgctaattcaaaggtaattgaaacataaacttaaattg 13692350  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttagga 267  Q
    || ||| ||| ||||||| ||||||||||  ||| ||||| |||| || | |||  ||||||||||||||    
T  13692349 gctttctagtgtttcccatggcaatgaaggccaaggttcccttaggtctgaccatctatgaatcttagga 13692280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 11933730 - 11933920
Alignment:
Q  10 tttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    |||||||||| |||| || ||||||||||| | ||||||| |  |||||||||||||| |  | |||||||||||| || ||||||  |||||| || ||    
T  11933730 tttctaacctggtcgttcgtcaagttgcaccttctgatcgtatggtgatccttacgtgtgaagccttactctcccaattaattataagtctatctctgcg 11933829  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggca 200  Q
    |||||||| ||||| |||||||||||| |||||||||||||||||||||||| || ||||||| |||||||| | | |||||||| |||||    
T  11933830 atggctaactgcacttgttgatcgcaccgtgatccttacgtgcggggtcttgttaattcaaaggtaattgaagcatgaacttaaagtggca 11933920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 22173336 - 22173149
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| ||||||||||||||| |||||| |||| || | ||||| | ||| ||||||||| ||    
T  22173336 ttctaaccttgtcggttgtcaagttgcacatgttgatcgcacggtgatccttacgtgcagggtctatactatctcggttga-tctaggtctatcccttcg 22173238  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    ||||||||||||   ||  ||| |||| |||||||  ||||||| |||||||||| ||||||| |||||||||| ||||||||||||||    
T  22173237 atggctaattgcgtctgcagattgcacagtgatccacacgtgcgaggtcttgctaattcaaaggtaattgaaacataaacttaaattgg 22173149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 22357317 - 22357048
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||| ||||| || ||||||||| |||||||||||||||||||||| |||| || |   || |  ||| |||||||||| |    
T  22357317 ttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtctatactatctcgactggtc-taggtctatccctctg 22357219  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| | ||| ||||||||||| | ||||||||||||||||||||||  || ||||||| ||||||| || || | |||||||||| |||||   |    
T  22357218 atggctaaatccac-tgttgatcgcatgatgatccttacgtgcggggtctttgtaattcaaaggtaattgacacatagaattaaattggcgttccaagat 22357120  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    |||| ||  |||||||| |||||||||   ||| || |||||  |||||||||| ||| |||||||||||||    
T  22357119 ttccaaaaccaatgaaggtcaatgttcttgtaggtcggcccatctatgaatcttgggacactcatagcacac 22357048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 106 - 278
Target Start/End: Original strand, 4615119 - 4615288
Alignment:
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||| |||||  |||||| | ||  |||||||||||||||||||   |||| ||||||| |||||||||| ||||||||||||||| |||||    
T  4615119 tccgatggctaactgcactcgttgattgaacaatgatccttacgtgcggggt---gctaattcaaaggtaattgaaacataaacttaaattggctttcca 4615215  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagca 278  Q
    || ||||||||||||| |||| |||| ||||| |||| || |||||  ||| |||||||||| ||||||||||    
T  4615216 gtgtttcccaaggcaaggaaggtcaaggttcccttaggtctgcccatctataaatcttaggacactcatagca 4615288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 102 - 267
Target Start/End: Complemental strand, 11253471 - 11253305
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggca 200  Q
    |||||||||||||||| ||||| |||||||| || ||||||||||||||||||| |||||||| ||||||| ||||||| || ||| | ||| ||||||     
T  11253471 tccctccgatggctaactgcacctgttgatcacatggtgatccttacgtgcgggatcttgctaattcaaaggtaattgagacataatctttatattggct 11253372  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttagga 267  Q
    ||| ||| ||||||||||||||||||  ||| |||||  ||| || |||||  ||||||||||||||    
T  11253371 ttcgagtgtttcccaaggcaatgaaggccaaggttcctgtaggtctgcccatatatgaatcttagga 11253305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 14649207 - 14649401
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||| ||  ||||| ||||| || ||||||||| ||||||| |||||| ||||||| |||| || | ||||||  ||| | ||||||||||    
T  14649207 ttctaacctagtcagttgtcaagctgcacctgttgatcgcacggtgatccatacgtgtggggtctatactatctcggttgatc-taggtatatccctccg 14649305  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||| ||||| |  |||||||||| |||||||||  ||||||||||||||| ||||||| ||||| |||| || |||| ||||||| |||||    
T  14649306 atggctaactgcacctactgatcgcacgatgatccttatatgcggggtcttgctaattcaaaggtaattaaaacatagacttgaattggcgttcca 14649401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 289
Target Start/End: Original strand, 17107010 - 17107182
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaa 216  Q
    |||||| || |||||||||| |||||||||||||||||||||| |  | || ||| ||||||||| | ||||| | ||| ||| || ||| |||||||||    
T  17107010 ttgcacctgctgatcgcacgatgatccttacgtgcggggtcttaccgtctctaaggtaattgaaaacataaacctgaatcggcgtttcaggttttcccaa 17107109  T
Q  217 ggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    ||||||||||  |||||||||| ||| ||||||||  || |||| |||||| | |||||||||||||||||||    
T  17107110 ggcaatgaagaccaatgttccagtaggtcagcccatctacgaatattaggacattcatagcacaccctctctc 17107182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 5679542 - 5679711
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgatcg 133  Q
    ||||| ||||||||||||||||||| |||| |||| ||| | |||| |||| ||||||  ||| || || ||||| |||||||| | ||  |  ||||||    
T  5679542 tgcacctgctgatcgcacagtgatctttacatgcgtggtttatactatccctgttgatc-taggtcaattcctccaatggctaactacagctactgatcg 5679640  T
Q  134 cacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    || ||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||| ||||    
T  5679641 catggtgatccttacgtgcggggtcttgataattcaaaggtaattgaaacataaacttaaattggcgttcc 5679711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 17275909 - 17276060
Alignment:
Q  54 gtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgc 152  Q
    |||||||||||||||| ||||| |||| || | ||||||  ||  ||| |||||| ||||||||| ||||  || ||||||  |||||||||||| ||||    
T  17275909 gtgatccttacgtgcgaggtctatactatctcggttgatc-tatgtctgtccctctgatggctaactgcatctgctgatcgtgcggtgatccttatgtgc 17276007  T
Q  153 ggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||| ||||||| |||||||||| || |||||||||||| |||||    
T  17276008 ggggtcttgctaattcaaaggtaattgaaacatagacttaaattggctttcca 17276060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 19092696 - 19092793
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||| |||||||||| ||||| || | ||||||   ||||| ||||||| |||||||||||| ||||||| |||||||||| |||||||||||||    
T  19092696 tatcccttcgatggctaactgcacctgctcatcgcatactgatctttacgtgtggggtcttgctaattcaaaggtaattgaaacataaacttaaattg 19092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 222
Target Start/End: Original strand, 25094936 - 25095050
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||| ||||| ||||| || ||||||||| |||||||||| ||| |||||||||||| ||||||| ||||| |||  ||    ||||||||| |    
T  25094936 tccctccgatagctaactgcacctgctgatcgcacagtgatccttaagtgtggggtcttgctaattcaaaggtaattaaaa--ta----taaattggctt 25095029  T
Q  202 tccagtttttcccaaggcaat 222  Q
    ||||||||||| |||||||||    
T  25095030 tccagtttttctcaaggcaat 25095050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 17217154 - 17217235
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaa 181  Q
    ||||| ||||||| |||||||||| || ||||| |||| ||||||||||||| |||||| ||||| ||||||| ||||||||    
T  17217154 tatccttccgatgactaattgcacctgctgatcacacgatgatccttacgtgtggggtcctgctaattcaaaggtaattgaa 17217235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 25121015 - 25120823
Alignment:
Q  11 ttctaacctagtcggt-catcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    |||||||||| ||||| | ||||||||||| ||||||| ||||||||||  ||||||| ||||||||| |||| ||||||| | | | |||||||||||     
T  25121015 ttctaacctaatcggttcgtcaagttgcacctgctgattgcacagtgatatttacgtgtggggtcttagtctctcagttgact-tcggtctatccctcca 25120917  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattc 203  Q
    ||   ||||| ||| |  || || ||||||||||| |||||| |||||||| ||    ||||| |||||||||| || |||||| ||| |||||    
T  25120916 atatttaatttcacctactggtcacacggtgatccgtacgtgtggggtcttacttccacaaaggtaattgaaacatagacttaacttgacattc 25120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 19929373 - 19929245
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||| ||||||| | |||| ||||| || |||| ||||| |||||||| | ||  ||||||||||| ||||||| |||||||||| || ||||||||||    
T  19929373 tctattcctccgacgactaactgcacctgctgattgcacgatgatccttccatgacgggtcttgctaattcaaaggtaattgaaacatatacttaaattg 19929274  T
Q  198 gcattccagtttttcccaaggcaatgaag 226  Q
      ||||||   ||||| ||||||||||||    
T  19929273 agattccaagatttccaaaggcaatgaag 19929245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 17026054 - 17026007
Alignment:
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcgggg 156  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  17026054 gatgactaattgcacctgttgatcgcacggtgatccttacgtgcgggg 17026007  T

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Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 17025982 - 17025891
Alignment:
Q  195 ttggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    ||||| ||| ||| ||||||||||||||||||  ||| ||||  |||| || |||||  |||||||||||||| ||||||||||||| ||||    
T  17025982 ttggctttctagtgtttcccaaggcaatgaaggccaaggttctcttaggtctgcccatctatgaatcttaggacactcatagcacactctct 17025891  T

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Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 9851212 - 9851146
Alignment:
Q  26 tcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    |||||||||||||| ||||||| ||||| ||||| ||||||||  |||||||||||| || ||||||    
T  9851212 tcatcaagttgcacctgctgatagcacaatgatctttacgtgcaaggtcttactctctcaattgatt 9851146  T

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Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 17107009 - 17107054
Alignment:
Q  33 gttgcacatgctgatcgcacagtgatccttacgtgcggggtcttac 78  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  17107009 gttgcacctgctgatcgcacgatgatccttacgtgcggggtcttac 17107054  T

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Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 30600166 - 30600235
Alignment:
Q  28 atcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagt 97  Q
    |||||| ||||| || || |||||| |||||||||| ||| |||||||||||||| ||||||||| ||||    
T  30600166 atcaagctgcacttgttggtcgcacggtgatccttatgtgtggggtcttactctcacagttgattttagt 30600235  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 17672306 - 17672532
Alignment:
Q  12 tctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccga 110  Q
    ||||||||| ||| |  ||||| ||||| ||||||||||||||||||| |||||||| |||| | |||| || | ||||||| | | | ||||||||| |    
T  17672306 tctaacctaatcgattgtcaagctgcacctgctgatcgcacagtgatcgttacgtgcagggtgtatactatctcggttgatt-tcggtttatccctccaa 17672404  T
Q  111 tggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaactta-aacttaaattggcattccagttt 209  Q
    |   |  |||||| || || || ||| ||||||||||| || |||||||| | |  |||||| |||||||||| || | |||| |||||||||||    |    
T  17672405 tttttggttgcacctgctggtcacacagtgatccttacatgtggggtcttaccacctcaaaggtaattgaaacatagaccttatattggcattcctaaat 17672504  T
Q  210 ttcccaaggcaatgaagctcaatgttcc 237  Q
    |||| ||||||||||||  |||||||||    
T  17672505 ttccaaaggcaatgaaggccaatgttcc 17672532  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 39042246 - 39042183
Alignment:
Q  103 ccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatt 166  Q
    |||||| |||||||| | ||| || ||||||||||||||| |||||||||| ||| ||||||||    
T  39042246 ccctccaatggctaactacacctgctgatcgcacggtgattcttacgtgcgtggttttgctatt 39042183  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 19374600 - 19374518
Alignment:
Q  11 ttctaacctagtcggt-catcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    |||||||||| ||||| | | ||||||||| |  |||||||||||| |||||||||||||||| || ||||||  ||||||||    
T  19374600 ttctaacctaatcggttcgttaagttgcacctattgatcgcacagtcatccttacgtgcggggcctcactctcttagttgatt 19374518  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 23652044 - 23652098
Alignment:
Q  13 ctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtg 67  Q
    ||||||||||  ||||||||||||||| |||||||| ||  ||||||||||||||    
T  23652044 ctaacctagttagtcatcaagttgcacctgctgatcacatggtgatccttacgtg 23652098  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 11520963 - 11520910
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||||||  |||| |||||| |||||||||||||||  ||||||||||||    
T  11520963 tcaagttgcaccagctggtcgcacggtgatccttacgtgctaggtcttactctc 11520910  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 25094953 - 25094994
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| ||||||||||||||||||||||| ||| ||||||||    
T  25094953 tgcacctgctgatcgcacagtgatccttaagtgtggggtctt 25094994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 5956396 - 5956460
Alignment:
Q  140 gatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||||||||||||||||||||  |   |||||  |||||||||| ||||||||||||| ||||||    
T  5956396 gatccttacgtgcggggtcttattccctcaaaagtaattgaaacataaacttaaattgacattcc 5956460  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 9264783 - 9264704
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||| || || ||||||| ||||||||| ||   ||||||||||||| ||||||||| | | ||||||||||||    
T  9264783 tcaagttgcacttgatggtcgcacaatgatccttatgtttcgggtcttactctctcagttgatt-tcggtctatccctccg 9264704  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 26115588 - 26115540
Alignment:
Q  32 agttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactc 80  Q
    |||||||| ||||| || ||| |||||||||||||| ||||||||||||    
T  26115588 agttgcacctgctggtcacacggtgatccttacgtgtggggtcttactc 26115540  T

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Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 8978800 - 8978507
Alignment:
Q  1 gttcagacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttct 100  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||| |||    
T  8978800 gttcggacgtttctaacctagtcggtcgtcaagttgcacatgttgatcgcacaatgatccttacatgcggggtcgtactctcccagttgattataggtct 8978701  T
Q  101 atccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggca 200  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||     
T  8978700 atccctccgatggctaattgcacctgctgatcgcacggtgatccttacgtgcggggtcttgctaattcaaagttacttgaaacataaacttaaattggcg 8978601  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctctgctc 294  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||| |||| |||||||||||| || |||||||||||||||||||| |||||    
T  8978600 ttccagtttttcccaacgcaatgaaggttaatgttccattagttcaacccatttatgaatcttatgacactcatagcacaccctctctatgctc 8978507  T

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Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 286
Target Start/End: Complemental strand, 39272966 - 39272685
Alignment:
Q  5 agacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatcc 104  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||| ||||| ||| ||| |||||||||||| | |||||    
T  39272966 agacgtttctaacctagtcggtcgtcaagttgcacctgctgatcacacggtgatccttacgtgcgaggtctaactgtcctagttgattataggtttatcc 39272867  T
Q  105 ctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||||| |||||| ||||| |||||||| || ||||||||||||||||||||||||| || ||||| | |||||||||| ||||   || | ||| ||||    
T  39272866 ctccgacggctaactgcacctgttgatcacatggtgatccttacgtgcggggtcttgttaattcaatggtaattgaaacataaatcaaagtcggcgttcc 39272767  T
Q  205 agtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    ||||||||||||||||||||||  ||| |||||||||| || |||||  ||||||||  || | ||||||| ||||||||||    
T  39272766 agtttttcccaaggcaatgaaggccaaagttccattaggtcggcccatctatgaatcacagaacactcataacacaccctct 39272685  T

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Target: chr7; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 98 - 281
Target Start/End: Original strand, 11803400 - 11803583
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||  |||||||||||||    
T  11803400 tctatccctccaatggctaattgcacttgctgatcgcacggtgatccttacgtgcggggtctttctaattcaaaggtaattgaaatataaacttaaattg 11803499  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    || ||||||| ||||||||||||||||||  ||| ||||| |||| || |||||  |||||||||||||| ||| |||||||||    
T  11803500 gctttccagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactaatagcacac 11803583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 17190932 - 17190753
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||| | |||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||| ||||||||||||  | |    
T  17190932 tccctccgatggctaactgcacctattgatcgcacggtgatccctacgtgcagggtcttgctaattcaaaggtaattgaaacataaacttaaattttctt 17190833  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    |||| | |||||||||||||||||| |||| ||||| |||| || |||||  ||||||||||| || |||||||||||||    
T  17190832 tccactgtttcccaaggcaatgaaggtcaaggttcccttaggtctgcccatctatgaatcttatgacactcatagcacac 17190753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 118 - 289
Target Start/End: Complemental strand, 1847991 - 1847820
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaag 217  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||| |||| |||||||||| |||| |||||||| | ||| ||||||| |||||    
T  1847991 ttgcacgtgttgaccgcacagtgatccttacgtgcgaggtcttgctattttaaaggtaattgaaacataaaattaaattgtcgttctagttttttccaag 1847892  T
Q  218 gcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||||||||  ||| |||||||||| || |||||  ||||||| |||||| |||||||| ||||||||||||    
T  1847891 gcaatgaaggccaaggttccattagatcggcccatctatgaatattaggacactcatagtacaccctctctc 1847820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 98 - 288
Target Start/End: Original strand, 20582588 - 20582778
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||| || |||| |||||| ||||| || ||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||| |||||||||||||    
T  20582588 tctataccaccgacggctaactgcacctgctgatcgcacggtgatccttacatgccgggtcttgctaattcaaaggtaattgaaacataaacttaaattg 20582687  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     | ||| ||| ||| |||||||||||||| |||| ||||| |||| ||  ||||   |||||||||| |||||||||||||||| ||||||    
T  20582688 tctttcaagtgttttccaaggcaatgaaggtcaaggttcccttagatctacccatccatgaatcttatgatactcatagcacactctctct 20582778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 226
Target Start/End: Complemental strand, 13289139 - 13289018
Alignment:
Q  105 ctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    ||||||||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||| ||||||||||||||| ||||    
T  13289139 ctccgatggttaactgcacatgttgatcgcacgatgatccttacgtgcggggtcttgctaatttaaaggtaattgaaacataaacttaaattggctttcc 13289040  T
Q  205 agtttttcccaaggcaatgaag 226  Q
    ||| ||||||||||||||||||    
T  13289039 agtgtttcccaaggcaatgaag 13289018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 18368744 - 18368556
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||||| ||| | ||| |  |||||||| |||||||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||| |||||    
T  18368744 tatccctccgatggttaacttcacctcctgatcgcatggtgatccttacgtgcagggtcttgctaattcaaaggtaattgaaacgtaaacctaatttggc 18368645  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     ||||||| |||||||||||||||||| | || ||||| |||| ||  ||||  ||||||||||| || ||||||||||||| ||||||    
T  18368644 tttccagtatttcccaaggcaatgaaggttaaggttcccttaggtcttcccatctatgaatcttatgacactcatagcacactctctct 18368556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 106 - 288
Target Start/End: Original strand, 8877761 - 8877943
Alignment:
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||| | ||| || ||| |||||||||||||||||||| ||||||||  || ||||||| |||||||||| ||||||||||||||| |||||    
T  8877761 tccgatggctaactacacctgatgaccgcacggtgatccttacgtgtggggtcttattaattcaaaggtaattgaaacataaacttaaattggccttcca 8877860  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    || |||||||||| |||||||  ||| ||||| |||| ||  || |  |||||||||||||| ||||| ||||||||||||||    
T  8877861 gtgtttcccaaggaaatgaaggccaaggttcccttaggtcttccgatctatgaatcttaggacactcaaagcacaccctctct 8877943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 226
Target Start/End: Complemental strand, 2574460 - 2574252
Alignment:
Q  17 cctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggcta 116  Q
    |||||| |||||||||||||||| |||| ||||||| |||||||||||||||| |||||||||||| || |||||| |||   |||||||  ||||||||    
T  2574460 cctagttggtcatcaagttgcacctgctaatcgcacggtgatccttacgtgcgaggtcttactctctcaattgatt-taggcttatccctttgatggcta 2574362  T
Q  117 attgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaa 216  Q
    |  |||| || | ||||| |||||||||||| ||||||||||||| || ||||||| |||||||| | |  |||||||||||  ||||| ||||||| ||    
T  2574361 acagcacctgctaatcgcgcggtgatccttatgtgcggggtcttgttaattcaaaggtaattgaagcatggacttaaattggttttccaatttttcctaa 2574262  T
Q  217 ggcaatgaag 226  Q
    ||| ||||||    
T  2574261 ggctatgaag 2574252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 22066964 - 22066784
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaa-attggca 200  Q
    |||||||||||||||| |||||    |||| ||||||||||||||||||| || ||||||||| ||||||| ||||||| || || |||| | ||||||     
T  22066964 tccctccgatggctaactgcacaaactgattgcacggtgatccttacgtgtggcgtcttgctaattcaaaggtaattgagacatagactttatattggct 22066865  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    ||||||| ||||||||||||||||||  ||| ||||| |||| || |||||  |||||||||||||| |||||||||||||    
T  22066864 ttccagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatagcacac 22066784  T

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Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 100 - 278
Target Start/End: Original strand, 17077443 - 17077621
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    ||||| || ||||||||| || || ||| ||||| |||||||||||||| ||| ||||||||||| ||||| | |||||||||| ||||||||||||||     
T  17077443 tatccatctgatggctaactgaacctgtcgatcgtacggtgatccttacatgcagggtcttgctaattcaacggtaattgaaacataaacttaaattggt 17077542  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagca 278  Q
      |||||| |||||||||||||||||| |||| ||||| |||| || |||||  ||||||||||| || ||||| ||||    
T  17077543 tgtccagtgtttcccaaggcaatgaagttcaaggttcccttaggtctgcccatctatgaatcttatgacactcaaagca 17077621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 214
Target Start/End: Original strand, 5106952 - 5107154
Alignment:
Q  9 gtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctcc 108  Q
    ||||||| |||| | ||||||||||||||||||||||||||||   ||||| |||||| |||| ||||||||||| ||||||||| ||| ||||||||||    
T  5106952 gtttctaccctaattggtcatcaagttgcacatgctgatcgcatgatgatcattacgtccggg-tcttactctcctagttgattaaagt-ctatccctcc 5107049  T
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtt 208  Q
    ||||||||| ||||| || || ||  ||||||||| |||| ||  |||||||| || ||||||| |||||||| | |  ||||||||||||  |||||||    
T  5107050 gatggctaactgcacttgctggtcatacggtgatctttacttgtagggtcttgttaattcaaaggtaattgaagcatggacttaaattggc-ctccagtt 5107148  T
Q  209 tttccc 214  Q
    ||||||    
T  5107149 tttccc 5107154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 222
Target Start/End: Complemental strand, 16058730 - 16058610
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||  |||||||||||||   |    
T  16058730 tccctccgatggctaactgcacctgctgatcgcacggtgacccttacgtgcggggtcttactaattcaaaggtaattgaaaaataaacttaaattgattt 16058631  T
Q  202 tccagtttttcccaaggcaat 222  Q
    |||||| ||||||||||||||    
T  16058630 tccagtgtttcccaaggcaat 16058610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 281
Target Start/End: Complemental strand, 8053799 - 8053646
Alignment:
Q  128 tgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagc 227  Q
    ||||| ||| ||||||||||||||||||||||| | | ||||||| |||||||||| ||||||||||||| | ||| ||| ||||||||||||||||||     
T  8053799 tgatcacactgtgatccttacgtgcggggtcttaccaattcaaaggtaattgaaacataaacttaaattgactttctagtgtttcccaaggcaatgaagg 8053700  T
Q  228 tcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
     ||| ||||| |||| |  ||| |  |||||||||||||| |||||||||||||    
T  8053699 ccaaggttcccttaggtttgcctatctatgaatcttaggacactcatagcacac 8053646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 7318589 - 7318748
Alignment:
Q  14 taacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatg 112  Q
    |||||||||||||  ||||| ||||| |||||||||||| ||||||| |||||||||||||| |||| || | ||||| | ||| |||||||||| ||||    
T  7318589 taacctagtcggttgtcaagctgcacttgctgatcgcacggtgatccatacgtgcggggtctatactatctcggttga-tctaggtctatccctcagatg 7318687  T
Q  113 gctaattgcacgtgttgatcgcacggtgat-ccttacgtgcggggtcttgctatttcaaag 172  Q
     |||| ||||| || ||||||||||||||| |||||||||||||| ||||||| |||||||    
T  7318688 actaactgcacctgctgatcgcacggtgatcccttacgtgcggggacttgctaattcaaag 7318748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 17152936 - 17152749
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||  ||||| |  |||||||||| |||||||||| |||||||||| |||  || ||||| ||  ||| | |||||||| |    
T  17152936 ttctaacctagtcggttgtcaatctgcacctattgatcgcacaatgatccttacatgcggggtctataccatctcagtttatc-taggtttatccctctg 17152838  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    || ||||| ||||| || ||||||||||||||||||||||||||||||||  ||| ||||||  |||||||||| ||||||||||||||    
T  17152837 atagctaactgcacctgctgatcgcacggtgatccttacgtgcggggtctaactaattcaaatgtaattgaaacataaacttaaattgg 17152749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 15869997 - 15870179
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattg-aaacttaaacttaaattgg 198  Q
    ||||||||||||||||||||| || | ||||||| |||||||||||||||||||| ||||||||| ||||||| |||||| |||| || |||||||||||    
T  15869997 tatccctccgatggctaattgtacctattgatcgtacggtgatccttacgtgcggagtcttgctaattcaaaggtaattgaaaacatagacttaaattgg 15870096  T
Q  199 cattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
      |||||   ||||| | |||||| ||| | ||| ||||  ||| || ||||| || ||||| |||||| |||||||||||||    
T  15870097 agttccaagatttccaatggcaatcaaggtaaatcttcctgtaggtcggcccatttttgaatattaggacactcatagcacac 15870179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 10586813 - 10586625
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||| ||||||||  ||||||||||| |  ||||||||  ||||||||||||||||||| || |||| || | ||| ||  ||| ||||||| | ||    
T  10586813 ttctaacttagtcggttgtcaagttgcacctattgatcgcatggtgatccttacgtgcgggggctatactatctcggtttatc-taggtctatcctttcg 10586715  T
Q  110 a-tggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    | ||||| | ||||| ||||||||||||| |||||||||| |||||||| |||||| ||||||| |||||||||| ||||||||||||||    
T  10586714 aatggcttactgcacatgttgatcgcacgatgatccttacatgcggggttttgctaattcaaaggtaattgaaacataaacttaaattgg 10586625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 282
Target Start/End: Complemental strand, 13759665 - 13759481
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||| ||||||||| | ||| |||||||||||| |||||| | ||||||  ||||||| || || |||| |||||||||| |||||||||||||    
T  13759665 tctatccctctgatggctaactacacatgttgatcgcacagtgatcttgacgtgcaaggtcttgttaattgaaaggtaattgaaacataaacttaaattg 13759566  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacacc 282  Q
    || ||  ||| |||||||||||| |||||  ||| ||||| |||| | | || |  |||||||||||||| |||||||| |||||    
T  13759565 gcgttttagtgtttcccaaggcactgaaggccaaggttcccttaggttatcctatatatgaatcttaggacactcatagtacacc 13759481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 9574796 - 9574930
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||| ||| ||||| |||||||| |||| ||||||||| |||||||||||||||| ||||||| || ||||||| ||||||||||||| | |    
T  9574796 tccctccgatggttaactgcacatgttgatcacacgatgatccttatgtgcggggtcttgctaattcaaaggtagttgaaacataaacttaaattgtcgt 9574895  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttc 236  Q
    |||    ||||| ||||||||||||  ||||||||    
T  9574896 tcctaggtttccaaaggcaatgaaggccaatgttc 9574930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 3734995 - 3735095
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||| |||| || ||||| ||||| || ||||||||||||||||||||||||| |||||||||||  |||||| |||||||||| |||||||||||||    
T  3734995 tctatctctccaatagctaactgcacctgctgatcgcacggtgatccttacgtgcagggtcttgctaactcaaaggtaattgaaacataaacttaaattg 3735094  T
Q  198 g 198  Q
    |    
T  3735095 g 3735095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 276
Target Start/End: Original strand, 4449367 - 4449511
Alignment:
Q  133 gcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaa-attggcattccagtttttcccaaggcaatgaagctcaa 231  Q
    |||| |||| ||||||||| |||||||||||| || |||| |||||||||| ||||||| | |||||| ||| ||| ||||||||||||||||||  |||    
T  4449367 gcacagtgagccttacgtgtggggtcttgctaatttaaaggtaattgaaacataaactttatattggctttctagtgtttcccaaggcaatgaaggccaa 4449466  T
Q  232 tgttccattagttcagcccaattatgaatcttaggatactcatag 276  Q
     ||||| |||| || |||||  |||||||||||||| ||||||||    
T  4449467 ggttcccttaggtctgcccatctatgaatcttaggacactcatag 4449511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 19153645 - 19153771
Alignment:
Q  55 tgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcgg 154  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||  || || ||  | ||||||| ||||||| |     
T  19153645 tgatccttacgtgtggggtcttactctcccagttgattataggtctatccatccgatggctaactgcatctgctggtcagatggtgatctttacgtgtgt 19153744  T
Q  155 ggtcttgctatttcaaagttaattgaa 181  Q
    | ||||| || ||||||| ||||||||    
T  19153745 gatcttgttaattcaaaggtaattgaa 19153771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 20753044 - 20753170
Alignment:
Q  55 tgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcgg 154  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||  || || ||  | ||||||| ||||||| |     
T  20753044 tgatccttacgtgtggggtcttactctcccagttgattataggtctatccatccgatggctaactgcatctgctggtcagatggtgatctttacgtgtgt 20753143  T
Q  155 ggtcttgctatttcaaagttaattgaa 181  Q
    | ||||| || ||||||| ||||||||    
T  20753144 gatcttgttaattcaaaggtaattgaa 20753170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 279
Target Start/End: Original strand, 1861292 - 1861471
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaa-attgg 198  Q
    ||||||||||||||||||  |||| || ||||||| |||||||| ||||   ||||||||||||  ||||||| |||||||||| ||||||| | |||||    
T  1861292 tatccctccgatggctaacagcacctgctgatcgcgcggtgatcattacaa-cggggtcttgctgattcaaaggtaattgaaacataaactttatattgg 1861390  T
Q  199 cattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcac 279  Q
    | ||| ||| ||||| |||||||||||| | || ||||| |||| ||  ||||  |||||||||||||| ||| |||||||    
T  1861391 ctttcgagtgtttccgaaggcaatgaaggtaaaggttcccttaggtcttcccatctatgaatcttaggacacttatagcac 1861471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 4986936 - 4986994
Alignment:
Q  125 tgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaac 183  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  4986936 tgttgatcgcacggtgatccttacgtgcggggtcttgctaattcaaaggtaattgaaac 4986994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 4991034 - 4991092
Alignment:
Q  125 tgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaac 183  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  4991034 tgttgatcgcacggtgatccttacgtgcggggtcttgctaattcaaaggtaattgaaac 4991092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 289
Target Start/End: Original strand, 6042865 - 6043042
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaa 216  Q
    |||||| || ||||| ||||| ||||||||||||||||||||| |  | || ||| |||||| || | |||||||||||||||||||||||||||| |||    
T  6042865 ttgcacctgctgatcacacggcgatccttacgtgcggggtctttccgtctctaaggtaattgcaagcataaacttaaattggcattccagtttttctcaa 6042964  T
Q  217 ggcaatgaagctcaatgttccattag-----ttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    || |||||||  |||   || |||||     |||||||||  |||||||||||||| |||||||||| || |||||||    
T  6042965 ggaaatgaaggccaagaatcaattagtttaattcagcccatctatgaatcttaggacactcatagcatactctctctc 6043042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 226
Target Start/End: Original strand, 6013904 - 6014118
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  | ||||||||  || ||||||||| |||||||||||||||  ||||| || | ||   ||||||  ||| |||||| |||||    
T  6013904 ttctaacctagtcggtttttaagttgcatctgttgatcgcacggtgatccttacgtgcaaggtctataatatctg-gttgatc-taggtctatcactccg 6014001  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    ||| |||| ||||| |||||| |   || |||||||||| ||||||||||| ||| || |||| |||||||||| || ||||||||||||||||| |  |    
T  6014002 atgcctaactgcacatgttgaccttgcgatgatccttacatgcggggtctttctaatttaaaggtaattgaaacatatacttaaattggcattcctggat 6014101  T
Q  210 ttcccaaggcaatgaag 226  Q
    |||| |||| |||||||    
T  6014102 ttccaaaggaaatgaag 6014118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 197
Target Start/End: Original strand, 1586309 - 1586462
Alignment:
Q  44 tgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgatcgcacggtgat 142  Q
    ||||| |||| ||||||||||||||||||||| |||| ||   ||||||| ||| |||||||||| ||| | ||| ||||| || ||||| |||| ||||    
T  1586309 tgatcacacattgatccttacgtgcggggtctatactatcttcgttgatt-taggtctatccctcggatagataactgcacctgctgatcacacgatgat 1586407  T
Q  143 ccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||||||||| | ||| || | ||||| |||||||||| || ||||||||||    
T  1586408 ccttacgtgcgggattttgttaatccaaaggtaattgaaacatagacttaaattg 1586462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 13277899 - 13277987
Alignment:
Q  128 tgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggcattccagtttttccca 215  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| || ||||| ||| | |||| ||||||| |||||||    
T  13277899 tgatcacacggtgatccttacgtgcggggtcttgctaattcaaaggtaattgagacataaactttataatggctttccagtgtttccca 13277987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 226
Target Start/End: Original strand, 1584868 - 1585064
Alignment:
Q  22 tcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgc 121  Q
    |||||| |||||||||||||| ||||||||||       ||||||| |||||||||||||||  ||| |||| ||  ||||||||| ||||||||| |||    
T  1584868 tcggtcgtcaagttgcacatgttgatcgcaca-------ttacgtgtggggtcttactctccatgtttattaaagg-ctatccctctgatggctaactgc 1584959  T
Q  122 acgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaa 221  Q
    || ||||| || | | |||| | |||| || ||||||||| || ||||||| |||| ||| | |  |||||||||||| ||||| |||| || ||||| |    
T  1584960 acatgttggtcactcagtgacctttacatgtggggtcttgttaattcaaaggtaatggaagcatggacttaaattggccttccaattttccctaaggcta 1585059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 16297627 - 16297456
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccga 110  Q
    |||||||||| |||||  ||||| ||||| |||| || |||| ||||||||||||||||||    |||| || | ||||||| | | ||||||||||| |    
T  16297627 ttctaacctaatcggttgtcaagctgcacctgctcattgcacggtgatccttacgtgcgggtcgatactatctcggttgatt-tcggtctatccctccaa 16297529  T
Q  111 tggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaac 183  Q
    ||  || |||||| | ||  || |||||||||||||||||| ||| |||| |||  |||||||||||||||||    
T  16297528 tgtttagttgcacctatttgtcacacggtgatccttacgtgtgggatcttactacctcaaagttaattgaaac 16297456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 1848019 - 1847949
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||||||||||||| ||| || |||| |||||| || ||| |||||||||||||||||||||| ||||||    
T  1848019 gacgtttctaacctaatcgatcgtcaatttgcacgtgttgaccgcacagtgatccttacgtgcgaggtctt 1847949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 4986906 - 4986971
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||||||||||||||  |||||||| |  || ||||||||| |||||||||||||||||||||||    
T  4986906 ttctaacctagtcggttgtcaagttgtatctgttgatcgcacggtgatccttacgtgcggggtctt 4986971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 4991004 - 4991069
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||||||||||||||  |||||||| |  || ||||||||| |||||||||||||||||||||||    
T  4991004 ttctaacctagtcggttgtcaagttgtatctgttgatcgcacggtgatccttacgtgcggggtctt 4991069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 7397478 - 7397535
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    ||||| || |||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  7397478 tgcacttgatgattgcacggtgatccttacgtgcggggtcttactctctcagttgatt 7397535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 9864096 - 9864043
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    ||||||||||| || || |||||| |||||||||||||||||||||||||||||    
T  9864096 tcaagttgcacttgttggtcgcacggtgatccttacgtgcggggtcttactctc 9864043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 13418856 - 13418949
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaa 193  Q
    |||| ||| ||||||||| | ||| || ||||||||||| |||||||| ||||| ||||||| || ||||||| |||||||||  |||||||||    
T  13418856 tatctctctgatggctaacttcacctgctgatcgcacggagatccttatgtgcgaggtcttggtaattcaaaggtaattgaaatataaacttaa 13418949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 18202996 - 18202809
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||||||| |||  |||||||| || ||||||| | || |||||| ||||||||||||| | |||| |    ||||||  ||| ||||| ||| |     
T  18202996 ttctaacctagtaggttgtcaagttgtacctgctgattgtacggtgatcattacgtgcggggtttatactatattggttgatc-taggtctattccttca 18202898  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||| ||||  || ||||||||| ||||||||||||||| |  | |||||| || |||| |||||||||| |||||||||||||||    
T  18202897 atggctaactgcatctgctgatcgcacagtgatccttacgtgcaga-tgttgctaatttaaaggtaattgaaacataaacttaaattggc 18202809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 3190760 - 3190660
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||||||||||||| |||||  | |||| ||||| ||| ||||||||  |||||||||||| ||||||| ||  |||||| | |||||| ||||    
T  3190760 tctatccctccgatggctaactgcacccgctgattgcacgatgagccttacgtttggggtcttgctaattcaaaggtagctgaaacatgaacttagattg 3190661  T
Q  198 g 198  Q
    |    
T  3190660 g 3190660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 3329256 - 3329177
Alignment:
Q  185 taaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatctta 264  Q
    ||||||||||||||| |||| |||||||||||||||||||||  ||| |||| ||  | ||||||||  |||||||||||    
T  3329256 taaacttaaattggcgttcccgtttttcccaaggcaatgaaggccaaggttcgatatggtcagcccatctatgaatctta 3329177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 9864091 - 9864049
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtctt 160  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  9864091 ttgcacttgttggtcgcacggtgatccttacgtgcggggtctt 9864049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 11803420 - 11803462
Alignment:
Q  34 ttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  11803420 ttgcacttgctgatcgcacggtgatccttacgtgcggggtctt 11803462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 16223911 - 16223858
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    ||||||||||| ||||| |||||| ||||||||||| || ||||||||||||||    
T  16223911 tcaagttgcacctgctggtcgcacggtgatccttacatgtggggtcttactctc 16223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 18662749 - 18662806
Alignment:
Q  11 ttctaacctagtcggt-catcaagttgcacatgctgatcgcacagtgatccttacgtg 67  Q
    |||||||||| ||||| | |||||||||||||| ||||||||| ||||||||||||||    
T  18662749 ttctaacctaatcggttcttcaagttgcacatgttgatcgcacggtgatccttacgtg 18662806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 21501594 - 21501647
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    ||||||||||| ||||| ||| |  |||||||||||||||||||||||||||||    
T  21501594 tcaagttgcacctgctggtcgtatggtgatccttacgtgcggggtcttactctc 21501647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 8293809 - 8293757
Alignment:
Q  30 caagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||||| ||||| | |||| || ||||||||||||||||||||||||||    
T  8293809 caagttgcacttgctggttgcacggttatccttacgtgcggggtcttactctc 8293757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 16058713 - 16058669
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtcttact 79  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||    
T  16058713 tgcacctgctgatcgcacggtgacccttacgtgcggggtcttact 16058669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 31493257 - 31493320
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    ||||||||||| || |||||||||| |||||||||| || |||| |||||||||  ||||||||    
T  31493257 tcaagttgcacctgttgatcgcacaatgatccttacatgtggggccttactctcttagttgatt 31493320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 9131218 - 9131393
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatcc 104  Q
    |||||| ||||||||||| ||| ||||| | ||| |||||||| ||| |||||||||||||| ||| ||| |||| || |||||||   ||| | |||||    
T  9131218 gacgttactaacctagtcagtcgtcaagctacacctgctgatcacacggtgatccttacgtgtgggatctatactatctcagttga--ctaggtttatcc 9131315  T
Q  105 ctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa 182  Q
    |||| |||  |  |||||  || |  || |||||||||||||||||| |||||||| | |  |||||| |||||||||    
T  9131316 ctccaatgtttggttgcatctgctcgtcacacggtgatccttacgtgtggggtcttaccacctcaaaggtaattgaaa 9131393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 3329321 - 3329280
Alignment:
Q  37 cacatgctgatcgcacagtgatccttacgtgcggggtcttac 78  Q
    ||||||||||||  ||||||||||||||||| ||||||||||    
T  3329321 cacatgctgatcatacagtgatccttacgtgtggggtcttac 3329280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 3735016 - 3735057
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| |||||||||||| ||||||||||||||| |||||||    
T  3735016 tgcacctgctgatcgcacggtgatccttacgtgcagggtctt 3735057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 5530347 - 5530400
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||||||||| || |||||  | ||||||||| |||||||||||||||||    
T  5530347 tcaagttgcacatgttgttcgcatggcgatccttacatgcggggtcttactctc 5530400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 7397478 - 7397519
Alignment:
Q  119 tgcacgtgttgatcgcacggtgatccttacgtgcggggtctt 160  Q
    ||||| || |||| ||||||||||||||||||||||||||||    
T  7397478 tgcacttgatgattgcacggtgatccttacgtgcggggtctt 7397519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 13289125 - 13289084
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||||| |||||||||  ||||||||||||||||||||||    
T  13289125 tgcacatgttgatcgcacgatgatccttacgtgcggggtctt 13289084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 18662773 - 18662806
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtg 151  Q
    |||||| |||||||||||||||||||||||||||    
T  18662773 ttgcacatgttgatcgcacggtgatccttacgtg 18662806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 21232815 - 21232860
Alignment:
Q  47 tcgcacagtgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    |||||| |||||||||||||||| |||||||||||| | |||||||    
T  21232815 tcgcacggtgatccttacgtgcgaggtcttactctctcggttgatt 21232860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 1587971 - 1588059
Alignment:
Q  138 gtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaag 226  Q
    |||||||||||||| |||||||  ||| ||||||| ||| | |||| ||||||||||||| | ||||   |||||| | ||||||||||    
T  1587971 gtgatccttacgtgtggggtctgtctaattcaaaggtaactaaaacataaacttaaattgacgttcctaattttccaatggcaatgaag 1588059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 17829880 - 17829944
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct 75  Q
    |||||||||| |||||  |||||||||||  | ||||| ||| ||||||||||||||| ||||||    
T  17829880 ttctaacctaatcggttgtcaagttgcaccagttgatcacacggtgatccttacgtgcagggtct 17829944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 22339074 - 22339010
Alignment:
Q  134 cacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    |||||||||||||||||| |||||||| ||   |||| | |||||||||| || |||||||||||    
T  22339074 cacggtgatccttacgtgtggggtcttactccctcaagggtaattgaaacatagacttaaattgg 22339010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 7e-83; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 6 - 289
Target Start/End: Complemental strand, 20144894 - 20144611
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||||||||||||||| |||||||| || | ||||||||   |||||||||||||||||||||||| | |||||||||||||||| |||||| |    
T  20144894 gacgtttctaacctagtcggtcgtcaagttgaaccttctgatcgcttggtgatccttacgtgcggggtcttattatcccagttgattataggtctatcgc 20144795  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    ||||||||||||||| ||  | |||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||||      
T  20144794 tccgatggctaattggaccggctgatggcacggtgatccttacgtgcggggtcttgttatttcaaaggtaattgaaacataaaattaaattggcattctt 20144695  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||||||| ||||||||||||  ||| ||||||||| |||||||||  ||| |||||||||  |||||||||||||||||||||    
T  20144694 gtttttccgaaggcaatgaaggacaaggttccattatttcagcccatctataaatcttaggtaactcatagcacaccctctctc 20144611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 6 - 289
Target Start/End: Original strand, 22187945 - 22188228
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||||||||||||||| |||||||| || | ||||||||   |||||||||||||||||||||||| | |||||||||||||||| |||||| |    
T  22187945 gacgtttctaacctagtcggtcgtcaagttgaaccttctgatcgcttggtgatccttacgtgcggggtcttattatcccagttgattataggtctatcgc 22188044  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    ||||||||||||||| ||  | |||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||||      
T  22188045 tccgatggctaattggaccggctgatggcacggtgatccttacgtgcggggtcttgttatttcaaaggtaattgaaacataaaattaaattggcattctt 22188144  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||||||| ||||||||||||  ||| ||||||||| |||||||||  ||| |||||||||  |||||||||||||||||||||    
T  22188145 gtttttccgaaggcaatgaaggacaaggttccattatttcagcccatctataaatcttaggtaactcatagcacaccctctctc 22188228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 11177246 - 11177516
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||| |||| |||||  ||||||||||| |||| |||||||||||||||||||||| ||||||| |||| || | ||||||| ||| | |||||||| |    
T  11177246 ttctagcctaatcggttgtcaagttgcacctgcttatcgcacagtgatccttacgtgtggggtctatactatctcggttgatt-taggtttatccctctg 11177344  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| ||||| ||  |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||| ||    
T  11177345 atggctaactgcacttgacgatcgcacagtgatccttacgtgcggggtcttgctaattcaaaggtaattgaaacatatacttaaattggcattccaggtt 11177444  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    |||| ||||||||||||  ||||||| || ||| ||||||||  | | |||||||||| ||||||| |||||    
T  11177445 ttccaaaggcaatgaaggccaatgttgcagtaggtcagcccatctgttaatcttaggacactcataacacac 11177516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 14072394 - 14072610
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||  |||||| ||||||||| |||||||||| ||||||| ||||||||    
T  14072394 gacgtttctaacctagtcggtcgtcaagttgcacctgctgatcgcacaatgatcaatacgtgtggggtcttattctcccagttcattataggtctatccc 14072493  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    ||||| |||||| ||||| || | ||| |||||||||||||||||||||||||||  || ||||||| |||||||||  ||||||||||||||  |||||    
T  14072494 tccgacggctaactgcacctgctaatcacacggtgatccttacgtgcggggtctttttaattcaaaggtaattgaaatataaacttaaattggtgttcca 14072593  T
Q  206 gtttttcccaaggcaat 222  Q
      |||||| ||||||||    
T  14072594 agttttccaaaggcaat 14072610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 286
Target Start/End: Complemental strand, 23009125 - 23008941
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||  || ||||| |||||||||||||||||||  ||||| |||| ||||||| |||||||||| ||||||||||||||| |    
T  23009125 tccctccgatggctaactgcagctgctgatctcacggtgatccttacgtgcaaggtctcgctaattcaaaggtaattgaaacataaacttaaattggctt 23009026  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    || ||| ||||||||||||||||||  ||| ||||| |||| || |||||  |||||||| ||||| ||| ||||||||| ||||    
T  23009025 tctagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccacctatgaatcataggacactaatagcacactctct 23008941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 286
Target Start/End: Original strand, 23779239 - 23779423
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||  || ||||| |||||||||||||||||||  ||||| |||| ||||||| |||||||||| ||||||||||||||| |    
T  23779239 tccctccgatggctaactgcagctgctgatctcacggtgatccttacgtgcaaggtctcgctaattcaaaggtaattgaaacataaacttaaattggctt 23779338  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    || ||| ||||||||||||||||||  ||| ||||| |||| || |||||  |||||||| ||||| ||| ||||||||| ||||    
T  23779339 tctagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccacctatgaatcataggacactaatagcacactctct 23779423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 130 - 288
Target Start/End: Original strand, 14722362 - 14722520
Alignment:
Q  130 atcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctc 229  Q
    |||||||||||||||||||  | ||| ||||| || ||||||| |||||||||| |||||| |||||| ||||||||| ||||||||| |||||||| ||    
T  14722362 atcgcacggtgatccttactcgagggatcttgttaattcaaaggtaattgaaacataaactcaaattgacattccagtgtttcccaagacaatgaaggtc 14722461  T
Q  230 aatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    || ||||| || ||||||||||  |||||||||||||| | ||||||||||||||||||    
T  14722462 aaggttccctttgttcagcccatctatgaatcttaggacattcatagcacaccctctct 14722520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 100 - 281
Target Start/End: Complemental strand, 22813462 - 22813280
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattgg 198  Q
    ||||||||| ||||| || ||||| || ||||||||||||||||||||| |||||||||||| || ||||||| |||||||||| ||||| ||  |||||    
T  22813462 tatccctccaatggccaactgcacctgctgatcgcacggtgatccttacctgcggggtcttgttaattcaaaggtaattgaaacgtaaactttgtattgg 22813363  T
Q  199 cattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    | ||||||| |||||||||| |||||||  ||||||||| |||| ||  ||||  |||||||||||||| |||||||||||||    
T  22813362 ctttccagtgtttcccaaggaaatgaagaccaatgttcccttagatctacccatctatgaatcttaggacactcatagcacac 22813280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 284
Target Start/End: Original strand, 9517116 - 9517304
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||||||||||||| ||||| ||||||||||||  ||||||||||| || ||||||| ||| |||| || |||||||||  |||||||||||||    
T  9517116 tctatccctccgatggctaactgcacctgttgatcgcaccatgatccttacgcgcagggtctttctaattcacaggtaattgaaaaataaacttaaattg 9517215  T
Q  198 gcattccagtttttccc--aaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccct 284  Q
    |||||| ||| ||||||  ||| ||||||||  ||| ||||| |||| |  |||||  |||||||||||||| ||||||||||||||||    
T  9517216 gcattctagtgtttcccaaaagacaatgaaggacaaggttcccttaggttggcccatctatgaatcttaggacactcatagcacaccct 9517304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 19244888 - 19245081
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||||| |||||||||||||| ||||  |   ||||||  ||| | |||||||| |    
T  19244888 ttctaacctagtcggtcgtcaagctgcacctgctgatcgcacggtgatccctacgtgcggggtctatactaacttggttgatc-taggtatatccctctg 19244986  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    ||| |||| ||||| ||||||||||||| ||||||||| |||||||||||| | | ||||| | |||||||||| ||||||||||||||| ||||    
T  19244987 atgactaactgcacatgttgatcgcacgatgatccttatgtgcggggtcttaccaattcaagggtaattgaaacataaacttaaattggcgttcc 19245081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 286
Target Start/End: Original strand, 11136282 - 11136465
Alignment:
Q  103 ccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggcat 201  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| || ||||||| |||||||||| ||||| ||| |||||  |    
T  11136282 ccctccgatggctaactgcacctgctgatcgcacggtgatccttacgtgcggggtcttg-taattcaaaggtaattgaaacataaactttatattggttt 11136380  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    |||||| |||||||| |||||||||  ||| ||||| |||| || | |||  |||| |||||| || ||||||||||||| ||||    
T  11136381 tccagtgtttcccaaagcaatgaaggccaaggttcccttaggtctgtccatctatgtatcttatgacactcatagcacacgctct 11136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 289
Target Start/End: Original strand, 14637972 - 14638144
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaa 216  Q
    |||||| || ||||||||||||||||||||||||||||||||| | || || ||| || |||||| |  |||  ||||| ||||| | ||||||||||||    
T  14637972 ttgcacctgctgatcgcacggtgatccttacgtgcggggtcttaccatctctaaggtagttgaaaacacaaaaataaataggcatcctagtttttcccaa 14638071  T
Q  217 ggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||||||||   ||| |||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||    
T  14638072 ggcaatgaaagccaaggttccattagttcatcccatctatgaatcttaggacactcatagcacaccctctctc 14638144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 28933445 - 28933290
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||||||||||   ||||| ||||| || ||||||||| |||||||||||||| ||||||| |||| || |  |||||  ||| | ||||||||||    
T  28933445 ttctaacctagtcgggtgtcaagctgcacctgttgatcgcacggtgatccttacgtgtggggtctatactatctcgattgatc-taggtttatccctccg 28933347  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatt 166  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28933346 atggctaactgcacttgttgatcgcacggtgatccttacgtgcggggtcttgctatt 28933290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 280
Target Start/End: Complemental strand, 20005635 - 20005456
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggca 200  Q
    |||||| ||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||| ||| |||| |     
T  20005635 tccctctgatagctaactgcacctgttgattgcacgatgatccttacgtgcggggtcttgctaattcaaaggtaattgaaacataaactttatattgact 20005536  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcaca 280  Q
    ||| ||| ||||||||||||||||||  ||  ||||| |||| ||  ||||  |||||||||||||| ||||||||||||    
T  20005535 ttctagtgtttcccaaggcaatgaaggccatggttcccttaggtcttcccatctatgaatcttaggacactcatagcaca 20005456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 22568150 - 22568344
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgat-tatagttctatccctcc 108  Q
    |||||||||||||||   | |||||||||||||| |||| |  ||||||||||||||| || ||| |||| || || ||||| ||||| |||||| ||||    
T  22568150 ttctaacctagtcgggtgtaaagttgcacatgctaatcgtatggtgatccttacgtgcaggttctatactatctcaattgatctataggtctatctctcc 22568249  T
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||||| || ||||| ||||||||||||| |||||||||||||  |||||||  || ||||||| |||||||||| |||||||||||||| |||||    
T  22568250 gatggccaactgcacatgttgatcgcacgatgatccttacgtg-tgggtctttataattcaaaggtaattgaaacataaacttaaattggtattcc 22568344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 21907747 - 21907934
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcgggg-tct-tactctcccagttgattatagttctatccctcc 108  Q
    ||||||||||||||||  ||||| ||||| |||||||  |||||||||||||| |||||||| ||  |||| || |  |||||  ||| ||||||| |||    
T  21907747 ttctaacctagtcggttgtcaagctgcacctgctgatgacacagtgatccttatgtgcgggggtcaatactatctcgattgatc-taggtctatccatcc 21907845  T
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||||| ||||| || ||||||||||||||||||||||||| ||||||| ||| ||||||  |||||||||| || ||||||||||    
T  21907846 gatggctaagtgcacatgatgatcgcacggtgatccttacgtgcagggtcttactaattcaaaagtaattgaaacatagacttaaattg 21907934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 275
Target Start/End: Complemental strand, 27124255 - 27124089
Alignment:
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtt 208  Q
    ||||||||| ||||| || |||||||||||||||| |||||||| ||||||||||| ||||||| |||||||||| ||||||||| ||| | || ||||     
T  27124255 gatggctaactgcacctgctgatcgcacggtgatctttacgtgcagggtcttgctaattcaaaggtaattgaaacataaacttaagttgacttttcagtg 27124156  T
Q  209 tttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcata 275  Q
    ||||||||||||| ||||  ||| ||||| |||  ||  ||||   ||||||||||||| |||||||    
T  27124155 tttcccaaggcaacgaaggccaaggttcccttaagtcttcccatcaatgaatcttaggacactcata 27124089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 281
Target Start/End: Complemental strand, 6630378 - 6630207
Alignment:
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||||||||| || |||||||||  ||||||||| |||||| ||||||||| || |||| |||||||||| ||||||||||||| | |||||   |    
T  6630378 atggctaattgcacctgctgatcgcacaatgatccttatgtgcggagtcttgctaatttaaaggtaattgaaacataaacttaaattgacgttccaagat 6630279  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    | || ||||||||||||  ||||||||   ||| ||||| ||  |||||||| ||||||||| |||||||||    
T  6630278 tcccaaaggcaatgaaggacaatgttcttgtaggtcagctcatctatgaatcataggatactaatagcacac 6630207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 21688638 - 21688368
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||| |||||||  ||||| ||||| || ||||||||| |||| ||||| ||| ||||| | |||| || | ||||||  ||| ||||||||||||    
T  21688638 ttctaaccaagtcggttgtcaagctgcacctgttgatcgcacggtgacccttatgtgtggggtatatactatctcggttgatc-taggtctatccctccg 21688540  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||  || || || ||||||||||||||| |||||||||   ||||||||| ||||||| |||||||||| || |||||||||  | ||||  | |    
T  21688539 atggctagctggacctgctgatcgcacggtgatgcttacgtgcatcgtcttgctaattcaaaggtaattgaaacatagacttaaattatcgttcctatat 21688440  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    | || |||| |||||||  |||||||||   || ||   |||| |||||||||||||| |||||||||||||    
T  21688439 tgccaaaggaaatgaaggccaatgttcctgaaggtctttccaactatgaatcttaggacactcatagcacac 21688368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 286
Target Start/End: Original strand, 17382380 - 17382557
Alignment:
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggcattccagtt 208  Q
    |||||||| | ||| |||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||| ||||| ||| ||||||  ||||||     
T  17382380 atggctaactacacctgttgatcgcacggcgatccatacgtgcggggtcttgctaattcaaaggtaattgaaacataaactttatattggctctccagtg 17382479  T
Q  209 tttcccaaggcaatgaa-gctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    ||||||||||  ||||| |||| | ||||| |||||||  |||| |||| |||||||| | || |||||||||| ||||    
T  17382480 tttcccaaggatatgaaggctc-aggttcccttagttcttcccatttataaatcttagaacacccatagcacactctct 17382557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 113 - 286
Target Start/End: Complemental strand, 22412768 - 22412591
Alignment:
Q  113 gctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcatt----ccagtt 208  Q
    ||||| ||||| || |||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||||| ||    | |||     
T  22412768 gctaactgcacctgctgatcggacggtgatccttacgtgcagggtcttgctaattcaaaggtaattgaaatataaacttaaattggctttctagctagtg 22412669  T
Q  209 tttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    |||||||| |||||||||  ||| ||||| |||| ||  ||||  ||||||||||| || ||||||| ||||| ||||    
T  22412668 tttcccaatgcaatgaagtccaaggttcccttaggtcttcccatctatgaatcttatgacactcataacacactctct 22412591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 1635270 - 1635546
Alignment:
Q  5 agacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatc 103  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||| ||  |||||| ||||||| | ||||| |||| || |||||||   ||| ||||||    
T  1635270 agacgtttctaacctagccggtcgtcaagttgcacttgctgatcacatggtgatctttacgtgtgaggtctatactatctcagttga--ctaggtctatc 1635367  T
Q  104 cctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcatt 202  Q
    ||||| | | || ||||||| || ||||| ||||||||||||||| ||  |||| || |  | |||||| ||||||||| |  | |||||||||||| ||    
T  1635368 cctcctaagtctgattgcacctgctgatcacacggtgatccttacatgtagggtattaccgtctcaaaggtaattgaaagcaaatacttaaattggcttt 1635467  T
Q  203 ccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    |||   ||||||||||||||||||  ||| |||||  ||| ||  ||||  |||||||||||||| |||| || |||||    
T  1635468 ccaagatttcccaaggcaatgaaggccaaggttcctgtaggtctacccatctatgaatcttaggacactcgtatcacac 1635546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 289
Target Start/End: Original strand, 5625074 - 5625228
Alignment:
Q  135 acggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatg 233  Q
    ||||||||||||||||| ||| |||| | ||||  ||| ||||||||| | ||||||||||||||  |||||| ||||| |||||||||||||  ||| |    
T  5625074 acggtgatccttacgtgtggg-tcttaccatttataaggtaattgaaaacataaacttaaattggtgttccaggttttcacaaggcaatgaagaccaagg 5625172  T
Q  234 ttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||||||| |||||||||  ||||||||||| || ||||||||||||  |||||||    
T  5625173 ttccattacttcagcccatatatgaatcttaagacactcatagcacattctctctc 5625228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 15466679 - 15466903
Alignment:
Q  13 ctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgat 111  Q
    |||||||| |||||  | ||| ||||||| |||||||||   |||||||||||||  |||||| |||| || | |||||||  |||  |||||||  |||    
T  15466679 ctaacctactcggttgttaagatgcacatactgatcgcatgatgatccttacgtgtagggtctatactatctcggttgatttaagta-tatccctttgat 15466777  T
Q  112 ggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttttt 211  Q
    | |||| ||||| || ||||||||||| |||||||||||||||||||||| || ||||||  |||||||||| |  |||||||||||  ||||    |||    
T  15466778 gtctaaatgcacctgctgatcgcacggcgatccttacgtgcggggtcttggtaattcaaatgtaattgaaacattgacttaaattggtgttcctagattt 15466877  T
Q  212 cccaaggcaatgaagctcaatgttcc 237  Q
    || |||| ||||||| ||||||||||    
T  15466878 ccaaaggaaatgaaggtcaatgttcc 15466903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 289
Target Start/End: Complemental strand, 17823404 - 17823282
Alignment:
Q  166 ttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttag 265  Q
    ||||||| |||||||||| ||||||||||||||| |||||| | ||||||||| ||||| |  ||| |||||||||| ||  ||||  ||||||||||||    
T  17823404 ttcaaaggtaattgaaacataaacttaaattggctttccag-tgttcccaaggaaatgatggccaaggttccattaggtcttcccatctatgaatcttag 17823306  T
Q  266 gatactcatagcacaccctctctc 289  Q
     | ||||||||||||| |||||||    
T  17823305 aacactcatagcacactctctctc 17823282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 288
Target Start/End: Original strand, 24478762 - 24478861
Alignment:
Q  189 cttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||||||| ||||||| |||||||| |||||||||   || ||||| ||||||| |||||  |||||||||||||| ||||||| |||| |||||||    
T  24478762 cttaaattggctttccagtatttcccaatgcaatgaaggcgaaggttcccttagttctgcccatctatgaatcttaggacactcataccacagcctctct 24478861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 14637971 - 14638016
Alignment:
Q  33 gttgcacatgctgatcgcacagtgatccttacgtgcggggtcttac 78  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||    
T  14637971 gttgcacctgctgatcgcacggtgatccttacgtgcggggtcttac 14638016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 20002175 - 20002092
Alignment:
Q  10 tttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggt-cttactctcccagttgatta 93  Q
    |||||| |||| |||||| ||||||||||||| ||||||||||  ||||| ||||||| ||||| |||||||| |||||||||||    
T  20002175 tttctaccctaatcggtcgtcaagttgcacatactgatcgcacgatgatctttacgtgtggggtccttactct-ccagttgatta 20002092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 2587033 - 2587096
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    ||||||||||| ||||| |||||| ||||||||| | ||||||||||||||||| | |||||||    
T  2587033 tcaagttgcacctgctggtcgcacggtgatccttgcatgcggggtcttactctctcggttgatt 2587096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 11136298 - 11136339
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  11136298 tgcacctgctgatcgcacggtgatccttacgtgcggggtctt 11136339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 18075076 - 18074987
Alignment:
Q  138 gtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaaggcaatgaag 226  Q
    |||||||||||||| |||||||| | | || |||| ||||||||| | || |||||||||| ||||||| | ||||| ||||||||||||    
T  18075076 gtgatccttacgtgtggggtcttaccacttgaaaggtaattgaaagcatagacttaaattgacattccaatatttccaaaggcaatgaag 18074987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 9277038 - 9276986
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactct 81  Q
    |||||||| ||||| || |||||| |||||||||||||||| |||||||||||    
T  9277038 tcaagttgtacatgttggtcgcacggtgatccttacgtgcgaggtcttactct 9276986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 17826865 - 17826806
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggt 157  Q
    ||||| |||||||||||||| ||||| |||||||| || | |||||||||||||| ||||    
T  17826865 tctattcctccgatggctaactgcacctgttgatcccatgatgatccttacgtgcagggt 17826806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 8245371 - 8245425
Alignment:
Q  144 cttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    ||||||||||||||||||||  ||||||  |||||||||| || |||||||||||    
T  8245371 cttacgtgcggggtcttgcttattcaaaagtaattgaaacatagacttaaattgg 8245425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 22813443 - 22813402
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| |||||||||||| ||||||||||| |||||||||||    
T  22813443 tgcacctgctgatcgcacggtgatccttacctgcggggtctt 22813402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 14072707 - 14072767
Alignment:
Q  229 caatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||| ||||| ||| ||||||||  ||||||||||||   |||||||||||||||||||||    
T  14072707 caatcttccagtaggtcagcccatctatgaatcttagatcactcatagcacaccctctctc 14072767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 6 - 289
Target Start/End: Original strand, 72337 - 72620
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||||||||||||||| ||||||||||| | ||||| ||   |||||||| ||||||||||||||| | |||||||||||||||  ||||||||    
T  72337 gacgtttctaacctagtcggtcgtcaagttgcaccttctgattgcttggtgatcctaacgtgcggggtcttattatcccagttgattataagtctatccc 72436  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    | |||||| |||||| ||  | ||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||||      
T  72437 ttcgatgggtaattggacccgctgatcgcacagtgattcttacgtgcggggtcttgttatttcaaaggtaattgaaacataaaattaaattggcattctt 72536  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||||||| ||||||||||||  ||| ||||||||| |||||||||  ||| |||||||||| |||||||||||||||||||||    
T  72537 gtttttccgaaggcaatgaaggacaaggttccattatttcagcccatctataaatcttaggaaactcatagcacaccctctctc 72620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 273
Target Start/End: Original strand, 19908617 - 19908884
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    ||||||||||||||| |||||| |||||||  || |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||     
T  19908617 gacgtttctaacctaatcggtcgtcaagttatacttgctgatcgcacggtgatccttacgtgcgggggcttactctcccagttgataataggtctatcct 19908716  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||| ||||| ||||| |  ||||| || | ||||||||||||||||||||||  || ||||||| |||||||||  ||||||||||||||||  |||    
T  19908717 tccgattgctaactgcacctactgatcacatgatgatccttacgtgcggggtctttgtaattcaaaggtaattgaaagataaacttaaattggcacccca 19908816  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactca 273  Q
    ||||||||||||||||||||   ||| ||| |||||||||||||||  |||||||||||||| |||||    
T  19908817 gtttttcccaaggcaatgaaagccaaggtttcattagttcagcccatctatgaatcttaggacactca 19908884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 3116210 - 3115990
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||| | ||| |     
T  3116210 gacgtttctaacctagtcagtcgtcaagttgcacctgctgatcgcacggtgatccttacgtgtggggccttactctcccagttcattataggtatatgca 3116111  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    || ||||||||| ||||| || || || |||| ||||| ||||||| ||||||||| || ||||||| |||||||| | | ||||||||||||| |||||    
T  3116110 tctgatggctaactgcacctggtggtcacacgatgatctttacgtgtggggtcttgttaattcaaaggtaattgaagcatgaacttaaattggccttcca 3116011  T
Q  206 gtttttcccaaggcaatgaag 226  Q
    |||||||| ||||| ||||||    
T  3116010 gtttttcctaaggctatgaag 3115990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 19167778 - 19167954
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||| ||||||| ||| | |||| ||||||||||||||| |    
T  19167778 tccctccgatggctaactgcacctgttgatcgcacggtgatccttacgtgtgtggtcttgctaattcaaaggtaactaaaacataaacttaaattggctt 19167877  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagca 278  Q
    |||||| ||||||||||||||||||   || ||||| ||||||| |||||  |||||||||||||| ||||||||||    
T  19167878 tccagtgtttcccaaggcaatgaaggcaaaggttcccttagttccgcccatctatgaatcttaggacactcatagca 19167954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 12411479 - 12411668
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    ||||||||||||||| || ||||| || |||||||   |||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||| |||||    
T  12411479 tatccctccgatggccaactgcacctgctgatcgcgtagtgatccttacgtgcgaggtcttgctaattcaaaggtaattgaaacataaacttaatttggc 12411578  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
     ||||||||||| ||||||||||||||  ||| |||||||||| || |||||  | |||||||||||| ||||| |||||||||||||||    
T  12411579 tttccagttttttccaaggcaatgaaggccaaggttccattaggtcggcccatctgtgaatcttaggacactcaaagcacaccctctctc 12411668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 288
Target Start/End: Complemental strand, 20023270 - 20023085
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| | ||| ||||||| |||||||||| |||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||| |    
T  20023270 tccctccgatggctaacttcacttgttgattgcacggtgattcttatgtgcggggtcttgctaattcaaaggtaattgaaacataaacttaaattggc-t 20023172  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||| || |||||||||||| ||||  |  | ||||| |||| || || ||  |||||||||||||| ||||||||||||| ||||||    
T  20023171 tcctgtgtttcccaaggcagtgaaagttgaggttcccttaggtctgcacatctatgaatcttaggacactcatagcacactctctct 20023085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 5508643 - 5508862
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    ||||||| |||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||| |||| ||| |||||||| ||| |||||| | ||||||    
T  5508643 gacgtttttaacctagtcggtcgtcaagttacacctgctgatcgcac-gtgatccttatgtgtggggccttgctctcccaattggttataggtatatccc 5508741  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||| ||||| ||||| ||  | ||||||| ||||||| |  || ||| || ||||||| |||||||| | |  |||||||||| | ||| |    
T  5508742 tccgatggctaactgcacctgttggtcatatggtgatctttacgtgtgttgtattgttaattcaaaggtaattgaagcgtggacttaaattgaccttcaa 5508841  T
Q  206 gtttttcccaaggcaatgaag 226  Q
    |||||||  ||||| ||||||    
T  5508842 gtttttcataaggctatgaag 5508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 149 - 288
Target Start/End: Original strand, 8170276 - 8170415
Alignment:
Q  149 gtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagc 248  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||||| || ||||||| ||| ||||||||||||||  ||| ||||| |||| || ||    
T  8170276 gtgcggggtcttgctaattcaaaggtaattgaaacataaacttaaatttgctttccagtgtttaccaaggcaatgaaggccaaggttcccttaggtctgc 8170375  T
Q  249 ccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    |||  |||||||||||||| ||||||  ||||| ||||||    
T  8170376 ccatctatgaatcttaggacactcatgacacactctctct 8170415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 4650613 - 4650695
Alignment:
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaactt 191  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||    
T  4650613 gatggctaactgcacctgttgatcgcacggtgatccttacgtgcggggtcttggtaattcaaaggtaattgaaacataaactt 4650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 16221671 - 16221886
Alignment:
Q  9 gtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctcc 108  Q
    ||||||| |||| || |||||||||||||||||| |||||||||||||||| ||| |||||| |||||||||||||| ||||||| ||  ||| |||||     
T  16221671 gtttctaccctaatcagtcatcaagttgcacatgttgatcgcacagtgatcatta-gtgcggagtcttactctcccatttgattaaag-gctacccctct 16221768  T
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtt 208  Q
     |||||||| ||||| || || || |||  ||||| ||| ||  ||||||||| || ||||||| ||||| || | | ||||| ||||||  ||||||||    
T  16221769 aatggctaactgcacttgctggtcacacattgatctttatgtatggggtcttgttaattcaaagataattaaagcatgaacttcaattggtcttccagtt 16221868  T
Q  209 tttcccaaggcaatgaag 226  Q
    || || ||||| ||||||    
T  16221869 ttccctaaggctatgaag 16221886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 293
Target Start/End: Complemental strand, 8882850 - 8882658
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggca 200  Q
    |||||||| ||||||| ||||| |  |||||||||  |||||||||||||||| ||||||||  || |||| |||||| ||| ||||| ||| ||||||     
T  8882850 tccctccgctggctaactgcacctactgatcgcacaatgatccttacgtgcggcgtcttgcttatttaaaggtaattgtaacataaactttatattggct 8882751  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctctgct 293  Q
    ||||| | |||||||| ||||||||| |||| ||||| |||| |  |||||  |||||||||||||  ||||||||| ||| |||||| ||||    
T  8882750 ttccaatgtttcccaatgcaatgaaggtcaaggttcccttaggtatgcccatctatgaatcttaggccactcatagcccactctctctatgct 8882658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 236
Target Start/End: Complemental strand, 2723612 - 2723406
Alignment:
Q  30 caagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatggctaattgcacgtgtt 128  Q
    |||| ||||| |||| | ||||| |||||||||||||||||||||| |||| || | |||||| |||  | |||||||||  || |||| |  || ||||    
T  2723612 caagctgcacctgcttaccgcacggtgatccttacgtgcggggtctatactatctcggttgat-atatgtttatccctccattgtctaactatacatgtt 2723514  T
Q  129 gatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagct 228  Q
    ||||||||||||||| ||||||| || ||||| | | ||||||| |||||||||| || |||||||||||||||||    ||||| |||||||||||  |    
T  2723513 gatcgcacggtgatcgttacgtgtggcgtcttaccaattcaaaggtaattgaaacatagacttaaattggcattcctagatttccaaaggcaatgaaagt 2723414  T
Q  229 caatgttc 236  Q
    ||||||||    
T  2723413 caatgttc 2723406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 16229698 - 16229568
Alignment:
Q  142 tccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccatta 241  Q
    ||||||| || |||||||||||| ||||||| |||||||||| |||| |||||||||| ||||||| |||||||||| |||||||  ||| ||||| |||    
T  16229698 tccttacatgtggggtcttgctaattcaaaggtaattgaaacataaatttaaattggctttccagtgtttcccaaggaaatgaaggccaaggttccctta 16229599  T
Q  242 gttcagcccaattatgaatcttaggatactc 272  Q
      || |||||  |||||||||||||| ||||    
T  16229598 tgtctgcccatctatgaatcttaggacactc 16229568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 17156194 - 17156326
Alignment:
Q  104 cctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattc 203  Q
    |||||||||||||| | ||| ||||||||||| |||||||||||| ||||||||||| ||| ||||||| |||||||||  || ||||| |||||| |||    
T  17156194 cctccgatggctaaatacacttgttgatcgcaaggtgatccttacatgcggggtcttcctaattcaaaggtaattgaaagatagacttacattggcgttc 17156293  T
Q  204 cagtttttcccaaggcaatgaagctcaatgttc 236  Q
    |    ||||| ||||||||||||  ||||||||    
T  17156294 ctcgatttccaaaggcaatgaaggccaatgttc 17156326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 8143924 - 8144117
Alignment:
Q  11 ttctaacctagtcggt-catcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    |||||| ||||||||| |||||||||||||||| |||||||||  ||||| |||| ||||||| |||||| || ||||||||| ||| |||||||||||     
T  8143924 ttctaagctagtcggttcatcaagttgcacatgttgatcgcacgatgatctttacatgcggggccttactttctcagttgatt-taggtctatccctcca 8144022  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||   | || ||| |  |  || ||| |||||||||||||| | |||||| || | |||||| |||||||||| || ||||||||||| |||||    
T  8144023 atgttgagtttcacctactagtcacacagtgatccttacgtgtgaggtcttactctctcaaaggtaattgaaacatagacttaaattggaattcc 8144117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 934373 - 934434
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttg 161  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||    
T  934373 tatccctccgatggctaactgcacatgctgatcgcacggtgatccttacttgcggggtcttg 934434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 8765483 - 8765539
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcgg 154  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  8765483 tctatccctccgatggctaactgcacttgctgatcgcacggtgatccttacgtgcgg 8765539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 19575898 - 19575769
Alignment:
Q  159 ttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatga 258  Q
    |||||| ||||||| |||||||||| |||| ||||||| || ||||||| || |||||||||||||||  ||| || || |||| ||  | ||  |||||    
T  19575898 ttgctaattcaaaggtaattgaaacataaaattaaattagctttccagtgttccccaaggcaatgaaggccaaggtccccttaggtcttctcatctatga 19575799  T
Q  259 atcttaggatactcatagcacaccctctct 288  Q
    ||||||||| |||||||||| || ||||||    
T  19575798 atcttaggacactcatagcatactctctct 19575769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 38083869 - 38083933
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct 75  Q
    |||||||||||||||| |||||| ||||  ||||||| |||| ||||||||||||||||||||||    
T  38083869 ttctaacctagtcggttatcaagctgcatctgctgattgcacggtgatccttacgtgcggggtct 38083933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 21325669 - 21325715
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct 75  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  21325669 tcaagttgcacatgttgatcacacagtgatccttacgtgcggggtct 21325715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 8446176 - 8446324
Alignment:
Q  55 tgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcgg 154  Q
    ||||||||||||||  |||||||||||| ||||||||| |||  |||||||||| |||   | ||| || |  || || |||  ||||||||||||| ||    
T  8446176 tgatccttacgtgcatggtcttactctctcagttgattttagc-ctatccctccaatgttgagttgaacctactggtcacacaatgatccttacgtgtgg 8446274  T
Q  155 ggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||||| ||   |||||| |||||||||| || |||||||||||||||||    
T  8446275 ggtcttactccctcaaaggtaattgaaacatagacttaaattggcattcc 8446324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 8319395 - 8319447
Alignment:
Q  131 tcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaac 183  Q
    |||||||||||||||||||||| || |||||||| ||||||| ||||||||||    
T  8319395 tcgcacggtgatccttacgtgcaggatcttgctaattcaaaggtaattgaaac 8319447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 8770385 - 8770441
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcgg 154  Q
    |||| ||||||||||||||| ||||| || ||||| |||||||||||||||||||||    
T  8770385 tctacccctccgatggctaactgcacttgctgatcacacggtgatccttacgtgcgg 8770441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 934392 - 934433
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  934392 tgcacatgctgatcgcacggtgatccttacttgcggggtctt 934433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 21302352 - 21302500
Alignment:
Q  134 cacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaat 232  Q
    |||||||||||||||||| |||||||| | || || ||| ||||||||| | || |||||||||||| |||||   ||| |||||||| |||||  |||     
T  21302352 cacggtgatccttacgtgtggggtcttaccatctctaaggtaattgaaagcatagacttaaattggctttccaagattttccaaggcagtgaaggccaag 21302451  T
Q  233 gttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    ||||   ||| ||  ||||  |||||||||||||| ||||||| |||||    
T  21302452 gttcttgtaggtcttcccatctatgaatcttaggacactcatatcacac 21302500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 27413613 - 27413565
Alignment:
Q  104 cctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgc 152  Q
    |||||||||||||| ||||| || ||||| |||||||||||||||||||    
T  27413613 cctccgatggctaactgcacctgctgatcacacggtgatccttacgtgc 27413565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 16245316 - 16245237
Alignment:
Q  209 tttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||||| ||||||||  ||| ||||| |||| ||  ||||  |||||||||||||| ||||||||||||| ||||||    
T  16245316 tttcccaagacaatgaaggccaaggttcctttaggtctacccatctatgaatcttaggacactcatagcacactctctct 16245237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 18736439 - 18736389
Alignment:
Q  32 agttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||| || |||||||||| |||||||||||| || ||||||||||||    
T  18736439 agttgcacttgttgatcgcacattgatccttacgttcgaggtcttactctc 18736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 22245659 - 22245712
Alignment:
Q  55 tgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    |||||||||||||||||||||||||||| | ||||||| | | ||||||||||||    
T  22245659 tgatccttacgtgcggggtcttactctctcggttgatt-tcgatctatccctccg 22245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 821284 - 821231
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    ||||||||||| ||||| | ||||  ||||||||||||||| ||||||||||||    
T  821284 tcaagttgcacctgctggttgcacgatgatccttacgtgcgaggtcttactctc 821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 4650623 - 4650664
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| || ||||||||| |||||||||||||||||||||||    
T  4650623 tgcacctgttgatcgcacggtgatccttacgtgcggggtctt 4650664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 8556898 - 8556849
Alignment:
Q  33 gttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    ||||||| ||||| |||||| || ||||||| ||||||||||||||||||    
T  8556898 gttgcacctgctggtcgcacggtaatccttatgtgcggggtcttactctc 8556849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 21325674 - 21325715
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtct 159  Q
    |||||| |||||||| ||| ||||||||||||||||||||||    
T  21325674 ttgcacatgttgatcacacagtgatccttacgtgcggggtct 21325715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 6 - 275
Target Start/End: Original strand, 28928951 - 28929220
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| | |||| |    
T  28928951 gacgtttctaacctagttggtcatcaagttgcacctgctgatcgcacggtgatccttacgtgtggggtcttactctctcagttgattataggtttatctc 28929050  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    ||||  |||||| ||||| || ||||||||| ||||||||||||| |||| ||||  || ||||||| |||||||||  || | |||||||||| || ||    
T  28929051 tccgggggctaactgcacatgctgatcgcacagtgatccttacgtacgggatcttattaattcaaaggtaattgaaatatagatttaaattggcgttgca 28929150  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcata 275  Q
     ||||||||||||||||||||  ||| ||  |||||||  || |||  |||||||||||||| |||||||    
T  28929151 atttttcccaaggcaatgaagtccaaggtatcattagtctagtccatctatgaatcttaggacactcata 28929220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 294
Target Start/End: Complemental strand, 17743240 - 17743050
Alignment:
Q  104 cctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattc 203  Q
    |||||||||||||| ||||| || ||||||||||  |||||||| || || ||||||| || ||||||| || ||||||| |||| ||||||||||||||    
T  17743240 cctccgatggctaactgcacttgatgatcgcacgacgatccttatgtacgaggtcttgttaattcaaaggtagttgaaacataaaattaaattggcattc 17743141  T
Q  204 cagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctctgctc 294  Q
    ||||||||||||||||||||||| | || ||||||||||||| || ||  ||| |||||||||| |||||| |||||||||||||||||||    
T  17743140 cagtttttcccaaggcaatgaaggttaaggttccattagttcggctcatctataaatcttaggacactcatggcacaccctctctctgctc 17743050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 98 - 284
Target Start/End: Complemental strand, 27908888 - 27908702
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||| |||| |||| ||||| || ||||  ||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  27908888 tctatccctctgatgcctaactgcacctgctgattacacggcgatccttacgtgcggggtcttgctaattcaaaggtaattgaaacataaacttaaattg 27908789  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccct 284  Q
    || ||||||||||| |||||| |||||||  ||| |||||||||| || | |||  |||||||||||||| ||||||||||||||||    
T  27908788 gcgttccagttttttccaaggaaatgaaggccaaggttccattaggtcggtccatctatgaatcttaggacactcatagcacaccct 27908702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 19199958 - 19199739
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||| |||| |||||| ||||||||||| | ||||||||||||||||| |||||  ||||||||||||||| |||||||||| ||  |||||||    
T  19199958 gacgtttctaccctaatcggtcgtcaagttgcacctactgatcgcacagtgatcattacgctcggggtcttactctctcagttgattaaag-gctatccc 19199860  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||||||||| || || || ||| |||||| ||||||| ||||||||| || ||||||| |||||||||| | |||||||||||    | ||    
T  19199859 tccgatggctaattgcacatgctggtcacacagtgatctttacgtgtggggtcttgttagttcaaaggtaattgaaacatgaacttaaattgatcgtaca 19199760  T
Q  206 gtttttcccaaggcaatgaag 226  Q
    |||||||| ||||| ||||||    
T  19199759 gtttttcctaaggctatgaag 19199739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 205
Target Start/End: Original strand, 13776642 - 13776841
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||||||||||  ||| ||||||||||| || |||| |||||  ||||||||||||||||| ||||||||||||||||||||||| |||| |||    
T  13776642 gacgtttctaacctagttagtcgtcaagttgcacctgttgattgcacaacgatccttacgtgcggggccttactctcccagttgattataggtctacccc 13776741  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    || |||||||||   ||| |  || || ||| |||||||||||||| ||||||||| || ||||||| |||||||||| ||||||||||||||| |||||    
T  13776742 tctgatggctaaccacacctactggtcacacagtgatccttacgtgtggggtcttgttaattcaaaggtaattgaaacataaacttaaattggctttcca 13776841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 100 - 286
Target Start/End: Original strand, 30411999 - 30412185
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    ||||||||||||||  || | ||| || ||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||    
T  30411999 tatccctccgatggacaactacacctgctgaacgcacggtgatccttacgtgcggggtcttgctaattcaaaggtaactgaaacataaacttaaattggc 30412098  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
     ||||||| ||||||||| ||||||||  ||| ||||| |||| || |||||  |||||||||||||||||||||| ||||| ||||    
T  30412099 tttccagtgtttcccaagacaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggatactcataacacactctct 30412185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 130 - 281
Target Start/End: Complemental strand, 18121955 - 18121804
Alignment:
Q  130 atcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctc 229  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||  ||||||| |||| |||||||||||||  |    
T  18121955 atcgcacagtgatccttacatgcggggtcttgctaattcaaaggtaattgaaacataaacttaaattggttttccagtgtttctcaaggcaatgaaggcc 18121856  T
Q  230 aatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    |||||||| |||| || |||||  |||||||||||||| |||||||||||||    
T  18121855 aatgttcccttaggtctgcccatctatgaatcttaggacactcatagcacac 18121804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 98 - 290
Target Start/End: Complemental strand, 17675398 - 17675206
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||||||||||| |||| ||||  || ||||| || ||||||||||| |||||| ||||||||| ||||||| |||| ||||| |||||||||||||    
T  17675398 tctatccctccgatgactaactgcatctgctgatcacatggtgatccttaggtgcggcgtcttgctaattcaaaggtaatggaaacataaacttaaattg 17675299  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctct 290  Q
    || ||| ||| ||||||||||||||||||  ||| ||||| |||| ||||||||  ||||||||||| || | ||||| ||||| ||||||||    
T  17675298 gcgttctagtgtttcccaaggcaatgaaggccaaggttcccttaggtcagcccatctatgaatcttaagacaatcataccacactctctctct 17675206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 293
Target Start/End: Original strand, 26667678 - 26667869
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||| |  ||||||||| |||||||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||| |    
T  26667678 tccctccgatggctaactgcacctactgatcgcacagtgatccttacgtgcggggtcttgctaactcaaaggtaattgaaacataaacttaaattggctt 26667777  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctctgct 293  Q
    |||||| ||||||||| ||||||||  ||| ||||  |||| |  | |||  |||| ||||||||| |||||||| |||| |||||| ||||    
T  26667778 tccagtgtttcccaagacaatgaaggccaaggttctcttaggtttgtccatctatggatcttaggacactcatagtacactctctctatgct 26667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 272
Target Start/End: Complemental strand, 22379242 - 22379069
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattgg 198  Q
    ||||||||  |||||||| ||||| |||||||| |||||||||||||||||||| ||||||| || || |||| |||||||||| ||||| ||| |||||    
T  22379242 tatccctctaatggctaactgcacatgttgatcacacggtgatccttacgtgcgaggtcttgttaattgaaaggtaattgaaacataaactttatattgg 22379143  T
Q  199 cattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactc 272  Q
    | ||||||| ||||||||||||||||||  ||| ||||| |||| || |||||  |||||||||||||| ||||    
T  22379142 ctttccagtgtttcccaaggcaatgaaggccaaggttccgttaggtctgcccatctatgaatcttaggacactc 22379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 25530818 - 25530958
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||| |  |||||||||||||||||||| |||||||||||| ||| ||||||| ||||||| || ||||||||||||||| |    
T  25530818 tccctccgatggctaaatgcacctactgatcgcacggtgatccttatgtgcggggtctttctaattcaaaggtaattgagacataaacttaaattggctt 25530917  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattag 242  Q
    || ||| ||| |||||||||||||| |||| ||||| ||||    
T  25530918 tctagtgtttaccaaggcaatgaaggtcaaggttcccttag 25530958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 288
Target Start/End: Complemental strand, 24090656 - 24090469
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaac-ttaaacttaaattggca 200  Q
    ||||||||||| |||||||||| || |||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||| | ||| ||| ||  ||     
T  24090656 tccctccgatgactaattgcacatgctgatcgcacggtgatccttatgtgtggggtcttgctaattcaaaggtaattgaaacataaaatttatatcagct 24090557  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||| |||||||||| |||||||  || |||||| |||| ||  | ||  |||||||||||||| ||||||||||||| ||||||    
T  24090556 ttccagtgtttcccaaggaaatgaaggccagtgttcccttaggtcttctcatctatgaatcttaggacactcatagcacactctctct 24090469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 100 - 290
Target Start/End: Complemental strand, 17635542 - 17635352
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    ||||||||||||| |||| ||||  || ||||| || ||||||||||| |||||| ||||||||| ||||||| |||| ||||| |||||||||| |||     
T  17635542 tatccctccgatgactaactgcatctgctgatcacatggtgatccttaggtgcggcgtcttgctaattcaaaggtaatggaaacataaacttaaactggt 17635443  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctct 290  Q
     ||| ||| ||||||||||||||||||  ||| ||||| |||| ||| ||||  |||||||||||||| | ||||| ||||| ||||||||    
T  17635442 cttctagtgtttcccaaggcaatgaaggccaaggttcccttaggtcatcccatctatgaatcttaggacaatcataccacactctctctct 17635352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 29849658 - 29849824
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatggctaattgcacgtgt 127  Q
    ||||| || ||||| ||||||||| ||| |||||||||| ||||||| | || || | ||||||  ||| |||||||||||||||||||| | ||| ||     
T  29849658 tcaagctgtacatgttgatcgcacggtgctccttacgtgtggggtctatgctatctcggttgatc-taggtctatccctccgatggctaactacacttgc 29849756  T
Q  128 tgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaat 195  Q
    |||||||||||| |||||||||||||||||||||| | ||||||| |||||||||| |||||||||||    
T  29849757 tgatcgcacggtaatccttacgtgcggggtcttgcaaattcaaaggtaattgaaacataaacttaaat 29849824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 23933347 - 23933225
Alignment:
Q  103 ccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcatt 202  Q
    ||||||||||||||| ||||| || |||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||| ||    
T  23933347 ccctccgatggctaactgcacctgctgatcgcacgatgatccttacgtgcggggtctttctaattcaaaggtaattgaaacataaacttaaattggcgtt 23933248  T
Q  203 ccagtttttcccaaggcaatgaa 225  Q
    ||    ||||| |||||||||||    
T  23933247 cctaggtttccaaaggcaatgaa 23933225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 102 - 272
Target Start/End: Original strand, 25535643 - 25535813
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    ||||| |||||||||| ||||| |||||||| |||| ||| || ||||||||||||||||||| || |||| ||||||| || ||||||||||||||  |    
T  25535643 tcccttcgatggctaactgcacctgttgatcacacgttgaaccgtacgtgcggggtcttgctaatttaaaggtaattgagacataaacttaaattgggtt 25535742  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactc 272  Q
    |||||| |||||||||||||||||   ||| ||||| |||| || | |||  |||||||||||||| ||||    
T  25535743 tccagtgtttcccaaggcaatgaatgccaaggttcccttaggtctgtccatctatgaatcttaggacactc 25535813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 20174422 - 20174240
Alignment:
Q  14 taacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatg 112  Q
    |||||||||||||  |||||||| || ||||||| |||||||||||||||||||   ||||| |||| || | ||||||  ||| |||||||||||||||    
T  20174422 taacctagtcggttgtcaagttgtacctgctgattgcacagtgatccttacgtgtaaggtctatactatctcggttgatc-taggtctatccctccgatg 20174324  T
Q  113 gctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaatt 196  Q
    ||||  ||||| ||  ||||||||  ||| ||||||||| |||||||||||| ||||||| |||||||||| || | |||||||    
T  20174323 gctatctgcacatgccgatcgcacaatgagccttacgtgtggggtcttgctaattcaaaggtaattgaaacatagaattaaatt 20174240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 288
Target Start/End: Original strand, 17198243 - 17198425
Alignment:
Q  107 ccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccag 206  Q
    ||||||||||| ||||| ||||||||||||   ||| ||||||| |||||||||| || ||||||| |||||||||| ||||||||||||||| |||||     
T  17198243 ccgatggctaactgcacatgttgatcgcacaacgattcttacgtacggggtcttgttaattcaaaggtaattgaaacataaacttaaattggctttccaa 17198342  T
Q  207 t-ttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    | |||||||||| ||||||||  ||   |||| ||||    |||||  |||||||||||||| ||||||| ||||| ||||||    
T  17198343 tgttttcccaagacaatgaaggccacgattcccttagggttgcccatctatgaatcttaggacactcataacacactctctct 17198425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 128 - 286
Target Start/End: Original strand, 29143312 - 29143470
Alignment:
Q  128 tgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagc 227  Q
    |||||||||||| ||||||||||| || ||||||||| ||||||| |||||||||| ||||||||||||||| ||||| | ||| | | |||||||||      
T  29143312 tgatcgcacggtaatccttacgtgtggagtcttgctaattcaaaggtaattgaaacataaacttaaattggctttccaatattttctagggcaatgaaag 29143411  T
Q  228 tcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
     ||| ||||| |||| || | |||  |||||||||||||| ||||||| ||||| ||||    
T  29143412 ccaaggttcccttaggtctgtccatctatgaatcttaggacactcataacacactctct 29143470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 29027809 - 29028002
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||||||||||   ||||| ||||| || |||||||||  |||||  |||||||| ||||| |||| || | |||||| |||| | |||||||| |    
T  29027809 ttctaacctagtcgggtgtcaagctgcacctgttgatcgcacgatgatcaatacgtgcgaggtctatactatctcggttgat-ataggtttatccctctg 29027907  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||||||| ||||| || |||| | ||| ||||||||||||||||||||||| ||  | |||| |||||||||| || |||||||||||| ||||    
T  29027908 atggctaactgcacctgctgattgtacgatgatccttacgtgcggggtcttgttaaattaaaggtaattgaaacatagacttaaattggcgttcc 29028002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 27541523 - 27541419
Alignment:
Q  185 taaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccct 284  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| |||| ||||| ||   |||  |||||||||||||| |||||||| |||| ||    
T  27541523 taaacttaaattggcattccagtttttcccaaggcaatgaaggccaaggttctattaggtcgaaccatctatgaatcttaggacactcatagaacactct 27541424  T
Q  285 ctctc 289  Q
    |||||    
T  27541423 ctctc 27541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 237
Target Start/End: Complemental strand, 25885218 - 25885022
Alignment:
Q  41 tgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgat-tatagttctatccctccgatggctaattgcacgtgttgatcgcacgg 138  Q
    |||||||||||| |||||||||||||||  ||||| |||| || ||| | || ||| ||| ||||||||  |||||||| ||||| ||||||||||||||    
T  25885218 tgctgatcgcacggtgatccttacgtgcatggtctatactatctcagataatctat-gtt-tatccctctaatggctaactgcacctgttgatcgcacgg 25885121  T
Q  139 tgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttcc 237  Q
    ||||| |||| ||  ||||||||||| || |||| |||||||||| || |||||||||| | ||||    ||||| |||||| ||||| ||||||||||    
T  25885120 tgatctttacatgtagggtcttgctaatttaaaggtaattgaaacatagacttaaattgacgttcctagatttccaaaggcagtgaaggtcaatgttcc 25885022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 281
Target Start/End: Complemental strand, 28605836 - 28605688
Alignment:
Q  133 gcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaat 232  Q
    |||||||||||||||| ||||||| ||||||| ||||||| |||||||| | || || ||||||||| |||||   ||||| |||| |||| ||   |||    
T  28605836 gcacggtgatccttacatgcggggccttgctaattcaaaggtaattgaaccatagacataaattggcgttccaagatttccaaaggtaatgcaggcaaat 28605737  T
Q  233 gttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    |||||  ||| ||||| ||  |||||||||||| | |||||||||||||    
T  28605736 gttcctatagatcagctcatctatgaatcttagaacactcatagcacac 28605688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 288
Target Start/End: Original strand, 25536314 - 25536417
Alignment:
Q  185 taaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccct 284  Q
    |||| |||||||||| ||||||| ||||||||||||||||||  ||| ||||| |||  ||  ||||  ||||||||||||||||||||||||| || ||    
T  25536314 taaatttaaattggctttccagtgtttcccaaggcaatgaaggccaaggttcccttatgtcttcccatctatgaatcttaggatactcatagcatactct 25536413  T
Q  285 ctct 288  Q
    ||||    
T  25536414 ctct 25536417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 25536009 - 25536123
Alignment:
Q  174 taattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactca 273  Q
    ||||||| || ||||||||||||||| || |||| |||||||||| ||||||   ||| ||||| |||  || |||||  ||||||||||||||||||||    
T  25536009 taattgagacataaacttaaattggcttttcagtgtttcccaagggaatgaaagccaaggttcccttatgtctgcccatctatgaatcttaggatactca 25536108  T
Q  274 tagcacaccctctct 288  Q
    ||||| || ||||||    
T  25536109 tagcatactctctct 25536123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 32085798 - 32085861
Alignment:
Q  119 tgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa 182  Q
    ||||| || |||||||||||||||||||||||||   ||||||||| ||||||| |||||||||    
T  32085798 tgcacttgctgatcgcacggtgatccttacgtgcactgtcttgctaattcaaagataattgaaa 32085861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 21078395 - 21078342
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||||||||||||  ||||||||||| |||| ||| ||||||||||||||    
T  21078395 tcaagttgcacatgctggccgcacagtgattcttatgtgtggggtcttactctc 21078342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 26667703 - 26667736
Alignment:
Q  43 ctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||||||||||||||||||||||||||||||||    
T  26667703 ctgatcgcacagtgatccttacgtgcggggtctt 26667736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 23011453 - 23011325
Alignment:
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtt 208  Q
    ||||||||| ||||  ||||||||| || ||||||| ||||||| |||| || ||| ||||||| |||||||||| ||   |||||||| | ||||        
T  23011453 gatggctaactgcatctgttgatcgaacagtgatccatacgtgcagggtttttctaattcaaaggtaattgaaacatagggttaaattgacgttcctaga 23011354  T
Q  209 tttcccaaggcaatgaagctcaatgttcc 237  Q
    ||||| ||||||||||||  |||||||||    
T  23011353 tttccaaaggcaatgaaggccaatgttcc 23011325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 17890267 - 17890326
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagtt 88  Q
    |||||||||||||| |||| |||| ||||||||||| ||||||  ||||||||| |||||    
T  17890267 tcaagttgcacatgttgatagcacggtgatccttacatgcgggaccttactctctcagtt 17890326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 24090640 - 24090598
Alignment:
Q  34 ttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||    
T  24090640 ttgcacatgctgatcgcacggtgatccttatgtgtggggtctt 24090598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 23933331 - 23933290
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  23933331 tgcacctgctgatcgcacgatgatccttacgtgcggggtctt 23933290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 25530970 - 25531063
Alignment:
Q  195 ttggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||| ||||| | ||||||||||||||||||  ||| ||||| |||  || | |||  |||||||||||||| |||||||||| || ||||||    
T  25530970 ttggctttccattgtttcccaaggcaatgaaggccaaggttcccttatgtctgaccatctatgaatcttaggacactcatagcatactctctct 25531063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 18121965 - 18121925
Alignment:
Q  36 gcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||| |||| ||||||||||||||||||| |||||||||||    
T  18121965 gcacctgctaatcgcacagtgatccttacatgcggggtctt 18121925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 45621651 - 45621571
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||| ||||| | || | |||||||||| |||||| ||| ||||||| | ||||||| | | ||||||||||||    
T  45621651 tcaagttgcacctgctggttgcgcggtgatccttatgtgcggagtcgtactctctcggttgatttttggtctatccctccg 45621571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 5e-56; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 16179317 - 16179594
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||| ||||| ||| |||| ||| |||||||||| ||||||||| | |||| || |  |||||  ||| |||||||||| |    
T  16179317 ttctaacctagtcggttgtcaagctgcacctgcagatcacacggtgatccttatgtgcggggtatatactatctcgattgatc-taggtctatccctctg 16179415  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| ||||  || ||||||||||  |||||||||||||||||||||| || || |||| |||||||||| | |||||||||||||||||||||||    
T  16179416 atggctaactgcatctgctgatcgcacgacgatccttacgtgcggggtcttgttaatttaaaggtaattgaaacatgaacttaaattggcattccagttt 16179515  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    || ||||||||||||||  |||  ||||||||||||||||||  |||||||||||||| ||  ||||||||||||||||    
T  16179516 tttccaaggcaatgaaggccaagattccattagttcagcccatctatgaatcttaggacacgtatagcacaccctctct 16179594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 98 - 289
Target Start/End: Complemental strand, 15543735 - 15543544
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||||    
T  15543735 tctatccctccgatggctaattgcacctgctgatcgcacggtgatccttacgtgcgggttcttgctaattcaaaggtaattgaaacataaacttaaattg 15543636  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |  |||||   ||||||||||||||||||  ||| |||||||||  || |||||  |||||||||||||| ||| |||||||||||||||||    
T  15543635 gatttccacagtttcccaaggcaatgaaggccaaggttccattaagtctgcccatctatgaatcttaggacacttatagcacaccctctctc 15543544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 25404280 - 25404043
Alignment:
Q  14 taacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatg 112  Q
    ||||||||| |||  ||||| ||||| || |||||||||||||||||||||||||||||||| ||   ||   ||||||   ||| ||||||||| ||||    
T  25404280 taacctagttggttgtcaagctgcacctgttgatcgcacagtgatccttacgtgcggggtctatatgatcttggttgatctaagt-ctatccctctgatg 25404182  T
Q  113 gctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttc 212  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  25404181 gctaactgcacatgttgatcgcacggtgatccctacgtgcggggtcttgttaattcaaaggtaattgaaacataaacttaaattggcattctagtttttc 25404082  T
Q  213 ccaaggcaatgaagctcaatgttccattagttcagccca 251  Q
    ||||||||||||||  ||| |||||  | ||||||||||    
T  25404081 ccaaggcaatgaaggccaaggttccggttgttcagccca 25404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 288
Target Start/End: Complemental strand, 18735968 - 18735781
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggca 200  Q
    ||||||| |||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||| ||| ||||||     
T  18735968 tccctccaatggataactgcacttgttgatcgcacgatgatccttacgtgcggggtcttgctaattcaaagataattgaaacataaactttatattggct 18735869  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||| |||||||| |||||||||  ||| ||||| ||||||  |||||  |||||||||||||| ||||||||||||| ||||||    
T  18735868 ttccagtgtttcccaacgcaatgaaggccaaggttcccttagttatgcccatctatgaatcttaggacactcatagcacactctctct 18735781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 288
Target Start/End: Complemental strand, 21985722 - 21985535
Alignment:
Q  101 atccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggca 200  Q
    ||||||| ||||||||  ||||  || |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||||| ||     
T  21985722 atccctctgatggctatatgcatctgctgatcgtacggtgatccttacttgcggggtcttgctaattcaaaggtaattgaaacataaacttaaattcgct 21985623  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||| |||||||||||||||||| |||| ||||| |||| || |||||  |||||||||||||| ||| ||||||||| ||||||    
T  21985622 ttccagtgtttcccaaggcaatgaaggtcaaggttcccttaggtctgcccatctatgaatcttaggacacttatagcacactctctct 21985535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 14779861 - 14780138
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||| ||||| |||||||||||| |||||||||| ||  ||||||| |||| || | ||||||  ||| | || || |||     
T  14779861 ttctaacctagtcggttgtcaagctgcacctgctgatcgcacggtgatccttatgtatggggtctatactatctcggttgatc-taggtttaaccatcca 14779959  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| ||||| |  ||||||| ||||||| |||||||| ||||||||| || ||||||| |||||||||| ||||||||||||||| ||||||| |    
T  14779960 atggctaaatgcaccttctgatcgcgcggtgattcttacgtgtggggtcttgttaattcaaaggtaattgaaacataaacttaaattggcgttccagtgt 14780059  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    |||||||||||||||||  ||| ||||   ||| ||  ||||  |||||||||||| | ||||||||||||||||||||    
T  14780060 ttcccaaggcaatgaaggccaaagttctcataggtcgacccatctatgaatcttagaacactcatagcacaccctctct 14780138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 18528957 - 18528769
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||| ||||||||| | ||| || |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||     
T  18528957 tatccctcggatggctaactacacctgctgattgcacggtgatccttacgtgcggggtcttgctaattcaaaggtaattgaaacataaacttaaattggt 18528858  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     ||||| | |||||||||| || ||||  ||| ||||| |||| ||   |||  |||||||||||||| ||||||||||||||||||||    
T  18528857 tttccactgtttcccaaggaaacgaaggccaaagttcccttaggtctaaccatatatgaatcttaggacactcatagcacaccctctct 18528769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 21334482 - 21334294
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||||| ||| ||||| |||||||||||| |||||||||| |||||||||||||||| |||||||  ||||||||| |||| |||||||||     
T  21334482 tatccctccgatggataactgcacctgttgatcgcactgtgatccttatgtgcggggtcttgctaattcaaaggcaattgaaacataaatttaaattggt 21334383  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     ||||||| ||||||||||||||||||  ||| ||||| |||| ||  ||||  |||||||||||||| | ||||| ||||| ||||||    
T  21334382 tttccagtgtttcccaaggcaatgaaggccaaggttcccttaggtcttcccatctatgaatcttaggacagtcataccacactctctct 21334294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 21449391 - 21449668
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgat-tatagttctatccctcc 108  Q
    ||||||||||||||||  ||||| | ||| ||||| |||||  |||||||||||||||||||||| |||| || | |||||| ||| ||| |||||| ||    
T  21449391 ttctaacctagtcggttgtcaagcttcacctgctggtcgcatggtgatccttacgtgcggggtctatactatctcggttgatctat-gtt-tatcccacc 21449488  T
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtt 208  Q
     |||||||| ||||| || | || ||||||||||||||| ||| ||||||||| || ||||||| ||| |||||| ||||||||||||||| ||| |||     
T  21449489 aatggctaactgcacctgctaattgcacggtgatccttatgtgaggggtcttgttaattcaaaggtaaatgaaacataaacttaaattggcgttctagtg 21449588  T
Q  209 tttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||| ||||||||||||   || ||||| |||| ||  | ||  |||||||||||||| ||||||||||||||||||||    
T  21449589 tttccaaaggcaatgaaggctaaggttcccttaggtcgacacatctatgaatcttaggacactcatagcacaccctctct 21449668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 108 - 288
Target Start/End: Complemental strand, 14781578 - 14781398
Alignment:
Q  108 cgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagt 207  Q
    |||||||||| ||||| || |||||||||||| ||||||||  |||||||||||||| ||||||| |||||||||| ||||||||||||| | |||||||    
T  14781578 cgatggctaactgcacttgctgatcgcacggtaatccttacaggcggggtcttgctaattcaaaggtaattgaaacataaacttaaattgactttccagt 14781479  T
Q  208 ttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     |||| |||||||||||||  ||| ||||  |||| ||  ||||  |||||||||||||| ||||||||||||| ||||||    
T  14781478 gtttctcaaggcaatgaaggccaaggttctcttaggtcttcccatctatgaatcttaggacactcatagcacactctctct 14781398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 266
Target Start/End: Complemental strand, 15812945 - 15812685
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    ||||||||||||||||||  || |||| ||||||   |||| |||||||||||| ||||||||||||||||||||||   |||| |||||| | ||||||    
T  15812945 gacgtttctaacctagtcaatcgtcaacttgcaccaactgaacgcacagtgatcattacgtgcggggtcttactctctg-gttggttataggtttatccc 15812847  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||| ||||| || || || ||| |||||| ||||||| ||||||||| || ||||||| | |||||||  | |||||||||| || ||| |    
T  15812846 tccgatggctaactgcacatgctggtcacacagtgatctttacgtgtggggtcttgttaattcaaaggtgattgaaaaatgaacttaaattagccttcta 15812747  T
Q  206 gtttttcccaaggcaatgaag-ctcaatgttccattagttcagcccaattatgaatcttagg 266  Q
    |||||||| ||||| ||||||   ||| |||||||||| | ||||||   ||||||||||||    
T  15812746 gtttttcctaaggctatgaagtaccaaagttccattaggttagcccatccatgaatcttagg 15812685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 16916659 - 16916541
Alignment:
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||| ||  |||||||||||||| |||||    
T  16916659 tccgatggctaactgcacatgttgatcgcacggtgatccttacatgcagggtcttgctaattcaaaggtaattgagac--aaacttaaattggctttcca 16916562  T
Q  206 gtttttcccaaggcaatgaag 226  Q
    || ||||||||||||||||||    
T  16916561 gtgtttcccaaggcaatgaag 16916541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 33190991 - 33191203
Alignment:
Q  14 taacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatg 112  Q
    ||||||||||| |  ||||| ||||| |||| ||||||||||||||||||||||| |||||| |||| || | ||||||  ||| | |||||||| ||||    
T  33190991 taacctagtcgattgtcaagctgcacctgctaatcgcacagtgatccttacgtgcagggtctatactatctcggttgatc-taggtttatccctctgatg 33191089  T
Q  113 gctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttc 212  Q
    |||||   ||| ||||||||||| |||||||||||||||| ||||||||||| ||||||  ||||| |||| ||||||||||||||| ||||    ||||    
T  33191090 gctaacaacacctgttgatcgcatggtgatccttacgtgcagggtcttgctaattcaaaagtaattaaaacataaacttaaattggcgttcctaggtttc 33191189  T
Q  213 ccaaggcaatgaag 226  Q
    | ||||||||||||    
T  33191190 caaaggcaatgaag 33191203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 114 - 281
Target Start/End: Complemental strand, 26612762 - 26612595
Alignment:
Q  114 ctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcc 213  Q
    |||| ||||| || |||||||| |||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||| | |||| || |||||    
T  26612762 ctaactgcacatgctgatcgcatggtgatccttacgtgcagggtcttgctaattcaaaggtaattgaaacataaacttaaattgactttccggtgtttcc 26612663  T
Q  214 caaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    ||||||||||||   ||| ||||| |||| || |||||  ||||||||| || | |||||||||||||    
T  26612662 caaggcaatgaaagccaaggttcccttaggtctgcccatctatgaatctcagaacactcatagcacac 26612595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 104 - 289
Target Start/End: Original strand, 18830853 - 18831039
Alignment:
Q  104 cctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaa-cttaaattggcatt 202  Q
    |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| || | ||||| |||| | ||| ||||  ||| |||||| ||    
T  18830853 cctccgatggctaattgcacctgctgatcgcacggtgatccttacatgcggggtcttgttaatacaaaggtaatagtaacataaattttatattggcttt 18830952  T
Q  203 ccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    ||||| ||||||||||||||||||  ||| ||  | |||| || || ||  ||||||||| |||| |||||||||||||||||||||    
T  18830953 ccagtgtttcccaaggcaatgaaggccaaggtaaccttaggtctgcacatctatgaatctaaggacactcatagcacaccctctctc 18831039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 22 - 226
Target Start/End: Complemental strand, 26648814 - 26648611
Alignment:
Q  22 tcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgc 121  Q
    |||||| ||||||||||| || ||| |||||| | ||| ||| ||||||||||||| ||||||||||||||| ||  | ||||||||||||||||| |||    
T  26648814 tcggtcgtcaagttgcacctgttgaacgcacattaatcattatgtgcggggtcttagtctcccagttgattaaaggac-atccctccgatggctaactgc 26648716  T
Q  122 acgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaa 221  Q
    || || || || ||| |||||| ||||| | ||||||||| || ||||||| |||||||||| | ||||||| ||||  |||||||||| || ||||| |    
T  26648715 acctgctggtcacacagtgatctttacgcgtggggtcttgttaattcaaaggtaattgaaacgtgaacttaatttggtcttccagttttccctaaggcta 26648616  T
Q  222 tgaag 226  Q
    |||||    
T  26648615 tgaag 26648611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 119 - 281
Target Start/End: Complemental strand, 9787641 - 9787479
Alignment:
Q  119 tgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaagg 218  Q
    ||||| ||||||||||||||| |||||||| | | ||||||||||| || |||| |||||||||| || |||||||||||| ||| || |||||| ||||    
T  9787641 tgcacctgttgatcgcacggtaatccttacattcagggtcttgctaattgaaaggtaattgaaacatagacttaaattggcgttctaggttttccaaagg 9787542  T
Q  219 caatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    ||||| || ||| ||||| | ||| |||||| || |||||||||||||| ||||||| |||||    
T  9787541 caatgcaggtcagtgttctagtaggtcagcctaactatgaatcttaggacactcataacacac 9787479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 266
Target Start/End: Original strand, 44795701 - 44795938
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgcacgtgtt 128  Q
    ||||||| ||| ||||||||||||  ||||| ||||||| |||| |||| ||||||||||||||| ||   |||||||||||||||||| ||||| || |    
T  44795701 tcaagttacacctgctgatcgcacgatgatcattacgtgtggggacttattctcccagttgattaaagga-tatccctccgatggctaagtgcacctgct 44795799  T
Q  129 gatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaag-c 227  Q
    | |  ||||| |||| ||| ||| ||||||||| || ||||||| |||||||| | | ||||||||||||| |||||||||| || ||||| ||||||      
T  44795800 ggtgacacggcgatctttatgtgtggggtcttgttaattcaaaggtaattgaagcatgaacttaaattggccttccagttttccctaaggctatgaagtg 44795899  T
Q  228 tcaatgttccattagttcagcccaattatgaatcttagg 266  Q
    ||||  ||||||||| | ||||||   ||||||||||||    
T  44795900 tcaaacttccattaggttagcccatccatgaatcttagg 44795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 288
Target Start/End: Original strand, 727844 - 728024
Alignment:
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggcattccagt 207  Q
    ||||| ||| ||||| || |||||||||| ||||||||||||||||||||||| || ||||||| |||||||||| | ||| ||| |||||| ||||| |    
T  727844 gatggttaactgcacctgctgatcgcacgttgatccttacgtgcggggtcttgttaattcaaaggtaattgaaacatgaactttatattggctttccaat 727943  T
Q  208 ttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     |||||||||||||||||| |||| ||||| |||| |  |||||  |||||| ||||||  ||||||| ||||| ||||||    
T  727944 gtttcccaaggcaatgaaggtcaaggttcccttaggtttgcccatctatgaaccttagggcactcataacacactctctct 728024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 287
Target Start/End: Original strand, 24054350 - 24054533
Alignment:
Q  104 cctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaa-attggcatt 202  Q
    |||| ||||||||| ||||| || |||||||||||||||  |||| ||||||||||||||| ||||||| ||| |||||| ||||||| | |||||| ||    
T  24054350 cctctgatggctaactgcacctgctgatcgcacggtgata-ttacatgcggggtcttgctaattcaaagataaatgaaacataaactttatattggcttt 24054448  T
Q  203 ccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctc 287  Q
    ||||| |||||||||||||||||| |||| ||||| |||  |  || ||   ||||||||||||| ||||||||||||| |||||    
T  24054449 ccagtgtttcccaaggcaatgaaggtcaaggttcccttaagtatgctcatcaatgaatcttaggacactcatagcacactctctc 24054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 18100800 - 18100574
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||||| | |||  ||||||||||| |||||||| ||| |||||||||||||||||||||| |||| || |  |||||  ||| | ||| |||| |    
T  18100800 ttctaacctacttggttgtcaagttgcacctgctgatcacacggtgatccttacgtgcggggtctatactatctcgattgatc-taggtttattcctctg 18100702  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||| ||| ||||| || || ||||||  ||||||||||||||||||||||| || ||||  | |||||||||| ||||| ||||| ||| |||||   |    
T  18100701 atggataactgcacatgctggtcgcacaatgatccttacgtgcggggtcttgttaattcagtggtaattgaaacataaacataaatcggcgttccaaggt 18100602  T
Q  210 ttcccaaggcaatgaagctcaatgttcc 237  Q
    |||| |||||||||||| ||||||||||    
T  18100601 ttccaaaggcaatgaaggtcaatgttcc 18100574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 278
Target Start/End: Original strand, 18826023 - 18826202
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattgg 198  Q
    ||||||| |||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||| || ||||||| |||||||||| ||||| ||| |||||    
T  18826023 tatcccttcgatggctaactgcacctgttgattgcacggtgatccttacgtgcgaggtcttgttaattcaaaggtaattgaaacataaactttatattgg 18826122  T
Q  199 cattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagca 278  Q
    | ||  ||| |||| ||||| |||||||  ||| ||||| ||||  || ||||  ||| |||||||||| ||||||||||    
T  18826123 ctttgtagtgtttcacaaggaaatgaaggccaacgttcccttaggacaacccatctataaatcttaggacactcatagca 18826202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 278
Target Start/End: Complemental strand, 15160237 - 15160057
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||| ||||||||||||| | ||| |||||||| |||| ||||||||||||||||| ||||| || ||||||| |||||||||  |||| ||||||||    
T  15160237 tctatctctccgatggctaacttcacctgttgatcacacgatgatccttacgtgcgggatcttgttaattcaaaggtaattgaaatataaaattaaattg 15160138  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagca 278  Q
     | ||| ||| |||| |||||||||||||   || ||||| |||| || ||| |  ||||||| |||||| ||||||||||    
T  15160137 actttcgagtgtttctcaaggcaatgaaggctaaggttcccttaggtctgcctatatatgaatgttaggacactcatagca 15160057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 24281586 - 24281773
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||||||||||   ||||| | ||| ||||| |||||||||||||||||| |||||||||| |||| || | || |||  ||| |||||||||  |    
T  24281586 ttctaacctagtcgggtgtcaagctccacctgctggtcgcacagtgatccttacatgcggggtctatactatctcggtagatc-taggtctatccctttg 24281684  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    |||||||| ||||| || ||||| ||||||||||||||| |||||||| || |||  ||||||  ||||||||| ||||||||||||||    
T  24281685 atggctaactgcacctgctgatcccacggtgatccttacatgcggggtttttctaactcaaaggcaattgaaacataaacttaaattgg 24281773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 16112163 - 16112236
Alignment:
Q  125 tgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||    
T  16112163 tgttgatcgcacggagatccttacgtgcggggtcttgctaattcaatggtaattgaaacataaacttaaattgg 16112236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 21972169 - 21972066
Alignment:
Q  19 tagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaat 118  Q
    ||||| ||| ||||||||||| |||||||||||  ||||||||||||||| |||||||||||| |||||| ||||||| ||||||| | ||||||||||     
T  21972169 tagtcagtcgtcaagttgcacctgctgatcgcagggtgatccttacgtgcagggtcttactct-ccagttaattataggtctatcctttcgatggctaac 21972071  T
Q  119 tgcac 123  Q
    |||||    
T  21972070 tgcac 21972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 23180165 - 23180280
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||| ||||||||| | ||| |  |||||||||||||||||||||||| ||||||||  || ||||| | |||||||||| ||||||||||||||| |    
T  23180165 tccctctgatggctaactacacctactgatcgcacggtgatccttacgtgtggggtctttttaattcaatggtaattgaaacataaacttaaattggctt 23180264  T
Q  202 tccagtttttcccaag 217  Q
    | |||| |||||||||    
T  23180265 ttcagtgtttcccaag 23180280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 279
Target Start/End: Complemental strand, 25403802 - 25403632
Alignment:
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggcattccagtt 208  Q
    |||||||| | ||| || ||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||| |||  | ||| |||     
T  25403802 atggctaactacacatgctgatcacacggtgatccttacgtgcagggtcttgctaattcaaaggtaattgaaacataaactttatatttactttctagtg 25403703  T
Q  209 tttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcac 279  Q
    |||||||||||||||||   ||| ||||| | || ||  ||||  |||||||||||||| | |||||||||    
T  25403702 tttcccaaggcaatgaatgccaaagttccctcaggtctacccatctatgaatcttaggacattcatagcac 25403632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 22623271 - 22623451
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggca 200  Q
    |||||||||||||||| ||  | | || |||||||  ||||||||||||||||||||||  || ||||||| |||||||||| ||||| ||| ||||||     
T  22623271 tccctccgatggctaactgggcctattaatcgcacaatgatccttacgtgcggggtctttataattcaaaggtaattgaaacataaactttatattggct 22623370  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    ||| ||| |||||||||  ||| ||   ||| ||||| |||  || |||||  |||||||||||||| |||||||||||||    
T  22623371 ttctagtgtttcccaagaaaataaaagccaaggttcccttaagtctgcccatctatgaatcttaggacactcatagcacac 22623451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 267
Target Start/End: Original strand, 29242837 - 29243006
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||| ||||||||| ||||| |  | |||||| |||| ||||||||| |||| ||| |  | ||||||| |||||||||| |||| ||||||||    
T  29242837 tctatccctctgatggctaactgcacctactaatcgcatggtggtccttacgtacgggatctcgtcaattcaaaggtaattgaaacataaatttaaattg 29242936  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttagga 267  Q
    ||  |||||| |||| ||||||||||||   ||| ||||| |||| ||  ||||  ||||||||||||||    
T  29242937 gctatccagtgtttcacaaggcaatgaaagccaaggttcccttaggtctacccatctatgaatcttagga 29243006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 15807807 - 15807613
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||||| | |||  ||||||||||| |||||||| ||| ||||||||||| |||||||||| || | || | ||||||| | ||| |||||||||     
T  15807807 ttctaacctaattggttgtcaagttgcacctgctgatcacacggtgatccttacatgcggggtctataatatctcggttgattttggtt-tatccctcca 15807709  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaactta-aacttaaattggcattcc 204  Q
    |||  || |||||| |  || || |||||||||||| ||||| |||||||| |||  |||||| |||||||||| || || ||| |||||||||||    
T  15807708 atgtttagttgcacatactggtcacacggtgatcctcacgtgtggggtcttactacctcaaaggtaattgaaacatagaatttatattggcattcc 15807613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 23037801 - 23037716
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgat 91  Q
    |||||||| | |||| || ||| |||||||||||  | ||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  23037801 gacgtttcaatcctaatccgtcgtcaagttgcactagttgatcccacggtgatcattacgtgcggggtcttactctcccagttgat 23037716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 24214962 - 24215047
Alignment:
Q  139 tgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatga 224  Q
    ||||||||||||| |||||||||| | ||||||| |||||||||| || |||||||||||| |||||   ||||| ||||||||||    
T  24214962 tgatccttacgtgaggggtcttgcgaattcaaaggtaattgaaacatagacttaaattggctttccaagatttccaaaggcaatga 24215047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 281
Target Start/End: Original strand, 22664560 - 22664743
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||||||  || ||||| | ||| ||||| ||||||  ||||||||| ||| || || |||||| ||||||  |||||| ||| || ||||||||||    
T  22664560 tctatccctcaaatagctaacttcacatgttggtcgcacattgatccttatgtgtggagttttgctaattcaaaagtaattgtaacatagacttaaattg 22664659  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    |  |||||   ||||| ||||||||||||  ||||||||   ||| ||  ||||  |||||||||||||| |||||||||||||    
T  22664660 gttttccaagatttccaaaggcaatgaaggccaatgttcatgtaggtctacccacgtatgaatcttaggacactcatagcacac 22664743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 25960865 - 25960739
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    ||||| || ||||||||| ||||| || |||||||||  |||||||| | ||||||||||| ||| ||||||| ||||||| || || |||||||||| |    
T  25960865 tatccttctgatggctaactgcacctgctgatcgcacaatgatccttgcatgcggggtcttactaattcaaaggtaattgatacatagacttaaattgac 25960766  T
Q  200 attccagtttttcccaaggcaatgaag 226  Q
     ||||    ||||| ||||||||||||    
T  25960765 gttcctacgtttccaaaggcaatgaag 25960739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 16360288 - 16360333
Alignment:
Q  32 agttgcacatgctgatcgcacagtgatccttacgtgcggggtctta 77  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  16360288 agttgcacatgctgatcgcacggtaatccttacgtgcggggtctta 16360333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 24267553 - 24267500
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    ||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||    
T  24267553 tcaagttgcacatgctggtcgcacgatgatccttacgtgcgaggtcttactctc 24267500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 34481272 - 34481325
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||||||||| || |||||||| |||||||||||| ||||||||||||||    
T  34481272 tcaagttgcacatgttggtcgcacagcgatccttacgtgtggggtcttactctc 34481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 16360290 - 16360368
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaatt 196  Q
    |||||| || |||||||||||| ||||||||||||||||||||  | |||||||  |||||||||  || |||||||||    
T  16360290 ttgcacatgctgatcgcacggtaatccttacgtgcggggtcttagtctttcaaaagtaattgaaatatagacttaaatt 16360368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 28008435 - 28008481
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct 75  Q
    ||||| ||||| ||||||||||||||||||||||||||| |||||||    
T  28008435 tcaagctgcacctgctgatcgcacagtgatccttacgtgtggggtct 28008481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 17359499 - 17359562
Alignment:
Q  119 tgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa 182  Q
    ||||| |||||||| |||||||||||||||||| |||||||| | || || ||| |||||||||    
T  17359499 tgcacatgttgatcacacggtgatccttacgtgtggggtcttaccatctctaaggtaattgaaa 17359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 15543715 - 15543673
Alignment:
Q  34 ttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||| |||||||||||| |||||||||||||||||| ||||    
T  15543715 ttgcacctgctgatcgcacggtgatccttacgtgcgggttctt 15543673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 18830867 - 18830909
Alignment:
Q  34 ttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||| |||||||||||| ||||||||||| |||||||||||    
T  18830867 ttgcacctgctgatcgcacggtgatccttacatgcggggtctt 18830909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 24214845 - 24214950
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||| ||||| ||||||| |||| |||  ||||||||| ||||||| |||| ||   ||||| | ||| ||||||||||||    
T  24214845 ttctaacctagtcggttgtcaagctgcacctgctgattgcacggtgggccttacgtgtggggtctatactatcttggttga-tctaggtctatccctccg 24214943  T
Q  110 atggcta 116  Q
    |||||||    
T  24214944 atggcta 24214950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 727854 - 727895
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  727854 tgcacctgctgatcgcacgttgatccttacgtgcggggtctt 727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 16112133 - 16112198
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||||| ||||| ||  ||||||| ||| || ||||||||| | |||||||||||||||||||||    
T  16112133 ttctaacgtagtcagttgtcaagttacacctgttgatcgcacggagatccttacgtgcggggtctt 16112198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 26612757 - 26612716
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  26612757 tgcacatgctgatcgcatggtgatccttacgtgcagggtctt 26612716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 27117489 - 27117436
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||| |||||| |||||||| ||| |||||| ||||||| ||||||||||||||    
T  27117489 tcaaattgcacctgctgatcacacggtgatcattacgtgtggggtcttactctc 27117436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 15299417 - 15299465
Alignment:
Q  32 agttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactc 80  Q
    |||||||| ||||| || ||||||||||||||| || ||||||||||||    
T  15299417 agttgcacctgctggtcacacagtgatccttacatgtggggtcttactc 15299465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 25960846 - 25960802
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtcttact 79  Q
    ||||| ||||||||||||| |||||||| | ||||||||||||||    
T  25960846 tgcacctgctgatcgcacaatgatccttgcatgcggggtcttact 25960802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 20744455 - 20744239
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtc-ttactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||  ||| ||||||||||| | ||||||||||  ||||||| | |||||||| | |||||||| ||||||||||||| || |||||||||    
T  20744455 ttctaacctagtatgtcgtcaagttgcaccttctgatcgcacgatgatcctgatgtgcgggggccttactctctcagttgattataggtccatccctccg 20744356  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| | ||| |  |||||||||||||||| ||||||| ||||||||| || ||||||| |||||||||| ||||||||||||| | |||||||||    
T  20744355 atggctaactacaccttctgatcgcacggtgatcgttacgtgtggggtcttgttaattcaaaggtaattgaaacataaacttaaattgacgttccagttt 20744256  T
Q  210 ttcccaaggcaatgaag 226  Q
    |||||||||||||||||    
T  20744255 ttcccaaggcaatgaag 20744239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 24659747 - 24659559
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| || ||||||| |||||||||| ||| ||||||||| |    
T  24659747 tatccctccgatggctaactgcacctgatgatcgcacggtgatccttacgtgcggggtcttgttaattcaaaggtaattgaaacataagcttaaattgtc 24659648  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     ||| ||| ||||||||||||||||||  ||| ||||| |||| |  |||||  |||||||||||||| ||||||||||||| ||||||    
T  24659647 tttctagtgtttcccaaggcaatgaaggacaaggttcccttaggtgtgcccatctatgaatcttaggacactcatagcacactctctct 24659559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 98 - 281
Target Start/End: Original strand, 34128968 - 34129152
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaactt-aaatt 196  Q
    |||||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||| | |||    
T  34128968 tctatccctccgatggctaactgcacttgctggtcgcacggtgatccttatgtgcggggtcttgctaattcaaaggtaattgaaacataaacttcatatt 34129067  T
Q  197 ggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    ||| ||||||| ||||||||||||||||||  ||| ||||| |||| || |||||  |||||||||||||| ||| |||||||||    
T  34129068 ggctttccagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacacttatagcacac 34129152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 288
Target Start/End: Complemental strand, 19008264 - 19008089
Alignment:
Q  113 gctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttc 212  Q
    ||||| ||||| || |||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| |||  || ||||    
T  19008264 gctaactgcacctgctgatcggacggtgatccttacgtgcggggtcttgctaattcaaagataattgaaacataaacttaaattggctttctggtgtttc 19008165  T
Q  213 ccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||||||||||  ||| ||||| |||| || |||||  |||||||||||||| ||||||||||||| ||||||    
T  19008164 ccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatagcacacactctct 19008089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 288
Target Start/End: Original strand, 24140816 - 24141001
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||| || ||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||  ||||||||||||||| |    
T  24140816 tccctccgatggctaactgcacctgctgatcacacggtgatccttacgtgtggggtcttgctaattcaaagctaattgaaagataaacttaaattggc-t 24140914  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    || ||| ||||||||||||||||||  ||||||||| |||  || |||||  |||||||||||||| ||||||| ||||| ||||||    
T  24140915 tctagtgtttcccaaggcaatgaaggccaatgttcccttaagtctgcccatatatgaatcttaggacactcataacacactctctct 24141001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 288
Target Start/End: Complemental strand, 20563848 - 20563662
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||| || ||| ||||||| ||||| |||| || |||||||||||| |    
T  20563848 tccctccgatggctaactgcacctgttgatcgtacggtgatccttacgtgtggggttttcctaattcaaaggtaatttaaacatagacttaaattggctt 20563749  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    |||||| ||||||||||||||||||  ||||||||| |||| |  |||||  | |||||||||||| | ||||||||||| ||||||    
T  20563748 tccagtgtttcccaaggcaatgaaggccaatgttcccttaggttcgcccatctttgaatcttaggacagtcatagcacactctctct 20563662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 106 - 288
Target Start/End: Complemental strand, 20549432 - 20549250
Alignment:
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||||||| ||||| | |||||||||| |||||||||||||| |||||||||||| ||||| | |||| ||||| ||||||||||||||  ||| |    
T  20549432 tccgatggctaactgcacttattgatcgcacagtgatccttacgtgtggggtcttgctaattcaagggtaatcgaaacataaacttaaattggatttcta 20549333  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    || ||||||||| ||||||||  ||| ||||| |||| ||  ||||  |||||||||||||| ||||||||||||| ||||||    
T  20549332 gtgtttcccaagacaatgaaggccaaggttcccttaggtcttcccatctatgaatcttaggacactcatagcacactctctct 20549250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 130 - 288
Target Start/End: Complemental strand, 24243702 - 24243545
Alignment:
Q  130 atcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctc 229  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||| ||||  |    
T  24243702 atcgcacggt-atccttacgtgcggggtcttgctaattcaaaggtaattgaaatataaacttaaattggcattccagtgtttcccaaggcaaggaagtcc 24243604  T
Q  230 aatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    || ||||| ||||  |  ||||  |||||||||||||| |||||||||||| |||||||    
T  24243603 aaggttcccttaggccgacccatctatgaatcttaggaaactcatagcacatcctctct 24243545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 100 - 280
Target Start/End: Original strand, 17432214 - 17432394
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||| ||||||||| |||||  |||||||||||| |||||| ||||||||||||||||||| ||||||| |||||||| | ||||||||||||| |    
T  17432214 tatccctctgatggctaactgcaccagttgatcgcacgatgatccatacgtgcggggtcttgctaattcaaaggtaattgaagcataaacttaaattgac 17432313  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcaca 280  Q
     ||| |||||| |||||||||||||||  ||  |||||||||| ||  ||||  ||||||| ||| || ||||||||||||    
T  17432314 tttctagttttccccaaggcaatgaaggccatggttccattaggtcttcccatctatgaattttacgacactcatagcaca 17432394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 119 - 289
Target Start/End: Original strand, 19051753 - 19051924
Alignment:
Q  119 tgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaag 217  Q
    ||||| || |||||||||||||||||||||||| |||| ||| |  |||| ||| ||||||||| | ||||||||||||||||||| |||||||||||||    
T  19051753 tgcacatgctgatcgcacggtgatccttacgtgtggggccttaccgtttctaaggtaattgaaagcataaacttaaattggcattctagtttttcccaag 19051852  T
Q  218 gcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctc 289  Q
    |||||||||  ||| ||||||||| || ||||||  |||||||| ||||| ||| ||||||||||| |||||    
T  19051853 gcaatgaaggccaaggttccattaatttagcccatctatgaatcctaggacacttatagcacacccgctctc 19051924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 274
Target Start/End: Complemental strand, 15375656 - 15375480
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||| | ||||| |||  |||||||||||||    
T  15375656 tctatccctccgatggctaactgcacctgatgatcgcacggtgatccttacgtgcggggtcttgctatatcaatggtaatttaaaaataaacttaaattg 15375557  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcat 274  Q
    || ||| ||| |||| |||| || |||||  ||||| ||| |||| ||  || |  |||||||||||||| ||||||    
T  15375556 gctttctagtgtttcacaagacattgaaggccaatgatcccttaggtcttcctatctatgaatcttaggaaactcat 15375480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 24265258 - 24265033
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||  ||||||||||||| |||| |||||||||||||||||| ||| |||| || ||||||||  ||  |||||||||| |    
T  24265258 ttctaacctagtcggttgtcaacctgcacatgctgattgcacggtgatccttacgtgcgggttctatactatctcagttgatc-tatgtctatccctctg 24265160  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| ||||| || || | | |||||||| ||||||||| |||| || ||| ||||| | |||||||||| || ||||||||| |||||||  | |    
T  24265159 atggctaactgcacctgctgcttggacggtgattcttacgtgcagggtttttctaattcaatggtaattgaaacatatacttaaatttgcattcctatgt 24265060  T
Q  210 ttcccaaggcaatgaagctcaatgttc 236  Q
    |||| ||||||||||||  ||||||||    
T  24265059 ttccaaaggcaatgaaggccaatgttc 24265033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 24341889 - 24341664
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||||||  ||||  ||||||||||||| |||| |||||||||||||||||| ||| |||| || ||||||||  ||  |||||||||| |    
T  24341889 ttctaacctagtcggttgtcaacctgcacatgctgattgcacggtgatccttacgtgcgggttctatactatctcagttgatc-tatgtctatccctctg 24341791  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| ||||| || || | | |||||||| ||||||||| |||| || ||| ||||| | |||||||||| || ||||||||| |||||||  | |    
T  24341790 atggctaactgcacctgctgcttggacggtgattcttacgtgcagggtttttctaattcaatggtaattgaaacatatacttaaatttgcattcctatgt 24341691  T
Q  210 ttcccaaggcaatgaagctcaatgttc 236  Q
    |||| ||||||||||||  ||||||||    
T  24341690 ttccaaaggcaatgaaggccaatgttc 24341664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 281
Target Start/End: Complemental strand, 16523288 - 16523113
Alignment:
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtct---tgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    ||||||||| ||||| || |||||||||||| |||||||| ||||||||||   ||||| ||||||| |||||| ||| || |||||||||||| |||||    
T  16523288 gatggctaactgcacctgctgatcgcacggttatccttacatgcggggtctaattgctaattcaaaggtaattgtaacatagacttaaattggctttcca 16523189  T
Q  206 gtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    || ||||||||||||||||||  ||| ||||| |||| || ||| |  |||||||||||||| ||||||| |||||    
T  16523188 gtatttcccaaggcaatgaaggccaaggttcccttaggtctgcctatctatgaatcttaggacactcataacacac 16523113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 279
Target Start/End: Original strand, 34487945 - 34488213
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||| |||||||||  ||||| | ||| ||||| ||||||  |||||||||||| |||||||| |||| || | ||||||  | || |||||||||||    
T  34487945 ttctaatctagtcggttgtcaagctacacctgctgttcgcacgatgatccttacgtacggggtctatactatctcggttgatcttggt-ctatccctccg 34488043  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||||||||| || |||||||||||||||||||| ||||| | |||||||| || |||| ||||||| || ||||||||||||||  ||||    |    
T  34488044 atggctaattgcacttgatgatcgcacggtgatccttatgtgcgtgatcttgctaatttaaaggtaattgatacataaacttaaattggtgttcctagat 34488143  T
Q  210 ttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcac 279  Q
    |||| ||| ||||||||  |||||||||   || ||  ||||  |||||||||||||| |||| ||||||    
T  34488144 ttccaaagacaatgaaggccaatgttcctgaaggtcttcccatctatgaatcttaggacactcgtagcac 34488213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 105 - 226
Target Start/End: Complemental strand, 17314826 - 17314705
Alignment:
Q  105 ctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||| |||||||  ||||| || |||||||||| |||||||||| |||||||||||| || ||||||| ||||||| || ||||||||||||||| ||||    
T  17314826 ctccaatggctagctgcacctgctgatcgcacgatgatccttacatgcggggtcttgttaattcaaaggtaattgagacataaacttaaattggctttcc 17314727  T
Q  205 agtttttcccaaggcaatgaag 226  Q
     || ||||||||||||||||||    
T  17314726 ggtgtttcccaaggcaatgaag 17314705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 222
Target Start/End: Original strand, 18938053 - 18938266
Alignment:
Q  8 cgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctc 107  Q
    |||| ||| ||||||||||  |||||||  || | ||||||||||| |||||||||||||||||||||||||||| |||||||||  || || ||||||     
T  18938053 cgttactaccctagtcggtagtcaagttttacctactgatcgcacaatgatccttacgtgcggggtcttactctctcagttgatttaaggtc-atccctt 18938151  T
Q  108 cgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagt 207  Q
     ||||||||| ||||| |  || || |||  || || |||||||   ||||||| || ||||||| |||||||| | | ||||||||||||  |||||||    
T  18938152 tgatggctaactgcacctactggtcacacaatggtctttacgtgtaaggtcttgttaattcaaaggtaattgaagcatgaacttaaattggtcttccagt 18938251  T
Q  208 ttttcccaaggcaat 222  Q
    |||||| ||||||||    
T  18938252 ttttccaaaggcaat 18938266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 28665143 - 28665317
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggca 200  Q
    ||||||| ||| |||| | |||||| |||| |||||||||||| ||||||| ||||||||||| ||||||| | |||||||| ||||| ||| ||||||     
T  28665143 tccctcctatgactaacttcacgtgctgattgcacggtgatccctacgtgcagggtcttgctaattcaaaggttattgaaacataaactttatattggct 28665242  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcata 275  Q
    ||||||| ||| ||||| || ||||| |||| ||||| |||| || |||||  ||||||||||| || |||||||    
T  28665243 ttccagtgttttccaagacattgaagatcaaggttcccttaggtctgcccatctatgaatcttatgacactcata 28665317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 286
Target Start/End: Original strand, 23335964 - 23336132
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaa 216  Q
    |||||| |||||||| |||| ||||||||||||| || |||||| | |||| ||| ||||||||| | ||||||||||||||| |||||| |||||||||    
T  23335964 ttgcacctgttgatcacacgatgatccttacgtgtggcgtcttgttgtttctaaggtaattgaaagcataaacttaaattggcgttccaggttttcccaa 23336063  T
Q  217 ggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    || |||||||  |||||||||| ||| || | |||  |||||||||||||| ||| ||| ||||| ||||    
T  23336064 gg-aatgaaggccaatgttccagtaggtctggccatctatgaatcttaggacactaatatcacacactct 23336132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 18207954 - 18207827
Alignment:
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||||||| | || ||||| |||||| |||||||| ||||||||||| | | ||||||| ||| |||||| || ||||||||||||||| |    |    
T  18207954 atggctaattgctcttgctgatcacacggtaatccttacatgcggggtcttacgaattcaaaggtaactgaaacatagacttaaattggcatttctagat 18207855  T
Q  210 ttcccaaggcaatgaagctcaatgttcc 237  Q
    |||| ||||||||||||  |||||||||    
T  18207854 ttccaaaggcaatgaaggccaatgttcc 18207827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 17474415 - 17474336
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||| ||||||||| || |||||||||| |||| ||||||||||||| ||||||||| | | ||||||||||||    
T  17474415 tcaagttgcacctgctgatcgtacggtgatccttatgtgcagggtcttactctctcagttgatt-tcggtctatccctccg 17474336  T

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Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 20859054 - 20859149
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||||||  |||| ||||| |  ||||||||||||||||||||||||   |||||| ||| ||||||| |||||||||| ||||||| |||||    
T  20859054 tccctccgatatctaactgcacctactgatcgcacggtgatccttacgtgtctggtcttactaattcaaaggtaattgaaacataaactttaattg 20859149  T

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Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 36175548 - 36175598
Alignment:
Q  32 agttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  36175548 agttgcacttgctgatcgcactgtgatccttacgtgcagggtcttactctc 36175598  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 26314075 - 26314112
Alignment:
Q  55 tgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    |||||||||||||||||||||||||||| |||||||||    
T  26314075 tgatccttacgtgcggggtcttactctctcagttgatt 26314112  T

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Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 36175465 - 36175629
Alignment:
Q  32 agttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgat 131  Q
    |||||||| |||| |||||||  ||||||||| ||||  |||||||||| | |  |||||| ||| |||||| |||   ||  || |||||| || ||||    
T  36175465 agttgcacctgctaatcgcactatgatccttatgtgcatggtcttactccctctattgatt-taggtctatctctcttttgtttagttgcacttgctgat 36175563  T
Q  132 cgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||| ||||||||||||||| ||||||| || | | |||  |||||||||| || ||||||||||    
T  36175564 cgcactgtgatccttacgtgcagggtcttactctctaaaaaataattgaaacatagacttaaattg 36175629  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 19051753 - 19051796
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtcttac 78  Q
    |||||||||||||||||| |||||||||||||| |||| |||||    
T  19051753 tgcacatgctgatcgcacggtgatccttacgtgtggggccttac 19051796  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 20315106 - 20315031
Alignment:
Q  211 tcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
    ||||||||||||||||  ||||||||| |||| || |||||  |||||||| ||||| ||||||| ||||| ||||    
T  20315106 tcccaaggcaatgaaggccaatgttcccttaggtctgcccatctatgaatcctaggacactcataacacactctct 20315031  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 15375635 - 15375594
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| || ||||||||| |||||||||||||||||||||||    
T  15375635 tgcacctgatgatcgcacggtgatccttacgtgcggggtctt 15375594  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 17470953 - 17470868
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattc 203  Q
    |||||| ||||| || || |||||||||||| || ||||| |||||   |||| | |||||||||| ||||||||| |||||||||    
T  17470953 ttgcacctgttggtcacatggtgatccttacatgtggggttttgctccctcaagggtaattgaaacataaacttaagttggcattc 17470868  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 19008258 - 19008217
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| ||||||||| || |||||||||||||||||||||||    
T  19008258 tgcacctgctgatcggacggtgatccttacgtgcggggtctt 19008217  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 24659728 - 24659687
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| || ||||||||| |||||||||||||||||||||||    
T  24659728 tgcacctgatgatcgcacggtgatccttacgtgcggggtctt 24659687  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 19002361 - 19002405
Alignment:
Q  33 gttgcacatgctgatcgcacagtgatccttacgtgcggggtctta 77  Q
    |||||||||||||||| |||  ||||||||||||| |||||||||    
T  19002361 gttgcacatgctgatcacacgttgatccttacgtgtggggtctta 19002405  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 20549410 - 20549378
Alignment:
Q  44 tgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||||||||||||||||||||| ||||||||    
T  20549410 tgatcgcacagtgatccttacgtgtggggtctt 20549378  T

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Target: scaffold0034 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 288
Target Start/End: Original strand, 76788 - 76973
Alignment:
Q  103 ccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcatt 202  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||| || |||||||||||| ||    
T  76788 ccctccgatggctaactgcacctgctgatcgcacggtgatccttacgtacggggtcttgctaattcaaaagtaattgaaacatagacttaaattggcttt 76887  T
Q  203 ccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||| |||||||||||||||| |||||| ||||| |||| || |||||  |||||||||||||| |||| |||||||| ||||||    
T  76888 ccagtgtttcccaaggcaatgaggctcaaggttcccttaggtctgcccatctatgaatcttaggacactcgtagcacactctctct 76973  T

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Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 76804 - 76845
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| |||||||||||| ||||||||||||| |||||||||    
T  76804 tgcacctgctgatcgcacggtgatccttacgtacggggtctt 76845  T

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Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 24114051 - 24113863
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||| ||||||||| | ||| || |||||||| |||||| ||||| |||||||||||| || ||||||| |||||||||| |||||||||||||||    
T  24114051 tatccctctgatggctaactacacctgctgatcgcatggtgattcttacatgcggggtcttgttaattcaaaggtaattgaaacataaacttaaattggc 24113952  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     ||||| |||||||||||||||||||| ||||||||||| ||  |||| |||  |||||| ||||||| ||||||||||| ||||||||    
T  24113951 gttccaatttttcccaaggcaatgaaggtcaatgttccaataagtcagtccatctatgaagcttaggacactcatagcactccctctct 24113863  T

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Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 286
Target Start/End: Original strand, 25226467 - 25226653
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||| ||||||| ||| || ||||| ||| ||||||||||||||||||||||||||| || |||| |||||||||| ||||||||||||| |    
T  25226467 tatccctccgatagctaatttcacctgctgatcacacagtgatccttacgtgcggggtcttgctaattaaaaggtaattgaaacataaacttaaattgac 25226566  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctct 286  Q
     ||| ||| |||||||| ||||||||  |||| ||||| ||| |||  ||||  |||||||||||||| |||||| |||||||||||    
T  25226567 tttctagtgtttcccaatgcaatgaaagtcaaggttcccttaattcttcccatctatgaatcttaggacactcattgcacaccctct 25226653  T

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Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 275
Target Start/End: Original strand, 17509569 - 17509746
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    ||||||||| |||||||||| ||||| || |||| |||||||||||||||| ||| |||||||| || ||||||| |||||||||| |||||||||||||    
T  17509569 tctatccctacgatggctaactgcacctgctgattgcacggtgatccttacatgcagggtcttgttaattcaaaggtaattgaaacataaacttaaattg 17509668  T
Q  198 gcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcata 275  Q
    || ||||||| |||||||||||||||||| |||| ||||| |||| ||  ||||  ||||||  ||||| ||||||||    
T  17509669 gctttccagtgtttcccaaggcaatgaaggtcaaggttcccttaggtcttcccatctatgaaagttaggttactcata 17509746  T

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Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 24110437 - 24110249
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    ||||||||| || ||||| ||||| || |||| |||  ||||||| || ||| |||||||||||| || |||| |||||||||| |||||||||||||||    
T  24110437 tatccctcctatagctaactgcacatgctgattgcatagtgatccatatgtgtggggtcttgctaatttaaaggtaattgaaacataaacttaaattggc 24110338  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     ||||||||||||||| | ||||||||  ||| |||||||||| ||| | ||  |||||||||||||| ||||||||||||||||||||    
T  24110337 gttccagtttttcccacgacaatgaagtccaaggttccattaggtcaacacatctatgaatcttaggacactcatagcacaccctctct 24110249  T

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Target: chr8; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 18448308 - 18448120
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||| ||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||||  || |||||| ||||||||||||| |    
T  18448308 tatccctctgatggttaactgcacctgctgatcgcacggtgatccttacgtgcggggtcttgctaattcaaaggcaagtgaaacataaacttaaattgac 18448209  T
Q  200 attccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     ||| ||| ||||| ||||||||||||  ||| ||||| |||||||  ||||   | ||||||||||| ||||||| ||||| ||||||    
T  18448208 tttctagtgtttcctaaggcaatgaaggccaaggttcccttagttcttcccatcgaggaatcttaggacactcatatcacactctctct 18448120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 125 - 288
Target Start/End: Original strand, 17996915 - 17997077
Alignment:
Q  125 tgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatga 224  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| ||| ||| ||||||||||||||||    
T  17996915 tgttgatcgcacggtaatccttacgtgcggggtcttgctaattcaaaggtaattgaaacataaacttaaattggc-ttctagtgtttcccaaggcaatga 17997013  T
Q  225 agctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||  ||| ||||| |||  |  | |||  |||||||||||||| |||||||| |||| ||||||    
T  17997014 aggccaaggttcccttaagtttgtccatctatgaatcttaggacactcatagtacactctctct 17997077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 294
Target Start/End: Complemental strand, 29382031 - 29381864
Alignment:
Q  128 tgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaaggcaatgaag 226  Q
    |||| |||||||||| ||||||||| ||||||| |  | || ||| ||||||||| | |||||||||||||| ||||||||||||||||||| |||||||    
T  29382031 tgattgcacggtgattcttacgtgcagggtcttaccgtatctaaggtaattgaaaacataaacttaaattggtattccagtttttcccaaggaaatgaag 29381932  T
Q  227 ctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctctgctc 294  Q
      ||| |||||||| |||||||| |  |||||||||||||| ||||||| |||||| |||||| ||||    
T  29381931 gccaaggttccatttgttcagccaatctatgaatcttaggacactcataacacaccatctctccgctc 29381864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 100 - 281
Target Start/End: Complemental strand, 24723357 - 24723175
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattgg 198  Q
    |||||||||||||||||| | ||| || |||||||||||||||||||||||  |||||||||||| ||||||| |||||||||| ||||| ||| |||||    
T  24723357 tatccctccgatggctaactacacctgctgatcgcacggtgatccttacgtctggggtcttgctaattcaaaggtaattgaaacataaactttatattgg 24723258  T
Q  199 cattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
    | ||  ||| ||||||||||||||||||  ||| ||||| |||| || |||||  || ||||||||  | | |||||||||||    
T  24723257 ctttatagtgtttcccaaggcaatgaagtccaaggttcccttaggtctgcccatctaggaatcttacaacattcatagcacac 24723175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 19787045 - 19787253
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||||||||||| |||  ||||| ||||| ||||||||||||   ||||||||||| |||||||| |||| || ||||||||  ||| | ||||||||||    
T  19787045 ttctaacctagttggttgtcaagatgcacctgctgatcgcacgacgatccttacgtacggggtctatactatctcagttgatc-taggtttatccctccg 19787143  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagttt 209  Q
    |||||||| || || || |||| |||||||||||||||| |||||| |||||  | ||||||| |||||||||| || |||||||||||  ||  |||||    
T  19787144 atggctaactgtacatgctgattgcacggtgatccttacatgcgggatcttgtcaattcaaaggtaattgaaacatagacttaaattggggttttagttt 19787243  T
Q  210 ttcccaaggc 219  Q
    |||| |||||    
T  19787244 ttccaaaggc 19787253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 17101672 - 17101573
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||| ||||||||| ||||  || ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  17101672 tatccctctgatggctaactgcatctgctgatcgcacagtgatccttacgtgcggggtcttgctaattcaaagataattgaaacataaacttaaattggc 17101573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 288
Target Start/End: Complemental strand, 23892894 - 23892744
Alignment:
Q  139 tgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaatt-ggcattccagtttttcccaaggcaatgaagctcaatgttcc 237  Q
    |||||||||| |||||| |||||||| ||||||| ||||||||||  |||||| | || ||| ||||||| ||||||||||||||||||  ||| |||||    
T  23892894 tgatccttacatgcgggatcttgctaattcaaaggtaattgaaacagaaactttattttggctttccagtgtttcccaaggcaatgaaggccaaggttcc 23892795  T
Q  238 attagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
     |||| |  |||||  |||||||||||||| ||||||||||||| ||||||    
T  23892794 cttaggtatgcccatctatgaatcttaggacactcatagcacactctctct 23892744  T

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Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 24269931 - 24270028
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||| ||||||| |||||||||  |||||||||||||||    
T  24269931 tccctccgatggctaattgcagatgttaatcacacggcgatccttacgtgtggggtcttgctaattcaaaggtaattgaaatataaacttaaattggc 24270028  T

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Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 14528454 - 14528612
Alignment:
Q  14 taacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatg 112  Q
    |||||||||||||  ||||| ||||| ||||| |||||| |||| ||||||||| ||||||| |||| || | ||||||  ||| |||||||||| ||||    
T  14528454 taacctagtcggttgtcaagctgcacctgctggtcgcacggtgaaccttacgtgaggggtctatactatctcggttgatc-taggtctatccctctgatg 14528552  T
Q  113 gctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaag 172  Q
    | ||| ||||| || |||||||||  ||||||||| |||||||||||||||| |||||||    
T  14528553 gataactgcacctgctgatcgcacattgatccttaagtgcggggtcttgctaattcaaag 14528612  T

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Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 276
Target Start/End: Original strand, 19264412 - 19264587
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggca 200  Q
    ||||| |||||||||| ||||| || ||||||||||||||| |||||||||||||| ||| || ||||||| |||||||||| ||||| |||  || |      
T  19264412 tcccttcgatggctaactgcacctgatgatcgcacggtgattcttacgtgcggggttttgttaattcaaaggtaattgaaacataaactttatgtttgtt 19264511  T
Q  201 ttccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatag 276  Q
    ||||| | ||||||||| ||||||||  ||| ||||| |||| || |||||  ||||||||||| || ||||||||    
T  19264512 ttccattgtttcccaagacaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaagacactcatag 19264587  T

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Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 7983883 - 7984074
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    |||| |||||||||||  ||||| || || ||||||| ||||||||||||||||||||||||||| || | |  | |||||   | ||| ||||||||||    
T  7983883 ttcttacctagtcggttgtcaagctg-acctgctgattgcacagtgatccttacgtgcggggtctatattatatcggttgaacttggtt-tatccctccg 7983980  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    ||| |||| ||||| | | |||||||| ||||||||||||||  ||||||||||| ||||||| | |||||||| ||||||||||||||| ||||    
T  7983981 atgtctaactgcacctat-gatcgcacagtgatccttacgtgtcgggtcttgctaattcaaaggtgattgaaacataaacttaaattggcgttcc 7984074  T

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Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 23867805 - 23867637
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgcacgtgtt 128  Q
    ||||||||||| |||||||||||| ||||||||||| || |||||||||||||| ||||| ||| ||| | |||||||||||||   | |||||| |  |    
T  23867805 tcaagttgcacctgctgatcgcacggtgatccttacatgtggggtcttactctctcagttcatt-taggtatatccctccgatgttgagttgcacctaat 23867707  T
Q  129 gatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattgg 198  Q
    | || |||||||||||||||||| | |||||| ||   |||| | ||| |||||| ||||||||| ||||    
T  23867706 ggtcacacggtgatccttacgtgtgtggtcttactccctcaatggtaactgaaacataaacttaagttgg 23867637  T

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Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 288
Target Start/End: Complemental strand, 26832050 - 26831901
Alignment:
Q  140 gatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattggcattccagtttttcccaaggcaatgaagctcaatgttcca 238  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||| ||||| ||| |||||| ||| ||| |||||||| ||||||||   ||| |||||     
T  26832050 gatccttacgtgcggcgtcttgctaattcaaaggtaattgaaacataaacattatattggctttctagtgtttcccaaagcaatgaaagccaaggttccc 26831951  T
Q  239 ttagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    |||| || ||| |  |||||||||||||| ||||||| || || ||||||    
T  26831950 ttaggtctgcctatctatgaatcttaggacactcataacatactctctct 26831901  T

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Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 242
Target Start/End: Complemental strand, 37528457 - 37528313
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||||| ||| ||||| ||||| ||||||||||||| ||||| ||||||||| | ||||| || ||||||| ||| || | |  ||||||||||||    
T  37528457 tctatccctctgattgctaactgcacctgttgatcgcacgatgatctttacgtgcgagatcttgttaattcaaaggtaactg-accacaaacttaaattg 37528359  T
Q  198 gcattccagtttttcccaaggcaatgaag-ctcaatgttccattag 242  Q
    |  ||||||||||| | ||||| ||||||  |||||||||||||||    
T  37528358 gtgttccagttttttcaaaggctatgaagtgtcaatgttccattag 37528313  T

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Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 281
Target Start/End: Complemental strand, 25182203 - 25181979
Alignment:
Q  57 atccttacgtgcggggtct-tactctcccagttgattatagttctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggg 155  Q
    ||||||||||||||||||| |||| || | ||||||  ||| |||||| ||  |||||||||  ||||  | |||||||| | ||||| ||| ||| | |    
T  25182203 atccttacgtgcggggtctatactatctcggttgatc-taggtctatcactttgatggctaacagcaccagctgatcgcaagatgatctttatgtgtgag 25182105  T
Q  156 gtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaatta 255  Q
    |||||| || ||||||| ||||| |||| || ||| |||| |   |||||| |||||| ||| ||||||||  |||||||||||||| |||| |||  ||    
T  25182104 gtcttgttaattcaaaggtaatttaaacatagactaaaatagttgttccagattttccaaagacaatgaaggccaatgttccattaggtcagtccatcta 25182005  T
Q  256 tgaatcttaggatactcatagcacac 281  Q
    |||||||||||| ||| ||| |||||    
T  25182004 tgaatcttaggacactaataacacac 25181979  T

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Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 16404288 - 16404343
Alignment:
Q  108 cgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgct 163  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||||    
T  16404288 cgatggctaactgcacctgttgatcgcacgatgatccttacgtgcgaggtcttgct 16404343  T

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Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 6885269 - 6885470
Alignment:
Q  9 gtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctcc 108  Q
    ||||||| |||| ||| || ||||||||||  || |||||||   |||||| |||| || |||||||||| |||||||||||||| |    ||||||||     
T  6885269 gtttctaccctaatcgatcgtcaagttgcatctgttgatcgcctggtgatcattacatgtggggtcttacactcccagttgatta-aacgatatccctca 6885367  T
Q  109 gatggctaattgcacgtgttgatcgcacggtgatcctt-acgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagt 207  Q
    ||||||||| ||||| || |  || |||| ||||| || ||||| ||| ||||| || ||||||| |||||||| | | ||||||||||||| ||| |||    
T  6885368 gatggctaactgcacctgctagtcacacgatgatctttaacgtgtgggctcttgttaattcaaaggtaattgaagcatgaacttaaattggccttcaagt 6885467  T
Q  208 ttt 210  Q
    |||    
T  6885468 ttt 6885470  T

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Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 28276456 - 28276367
Alignment:
Q  137 ggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaag 226  Q
    ||||||| ||||||| |||||||||  | ||||||| |||||||| | | ||||||||||||| |||| |||||||| ||||| ||||||    
T  28276456 ggtgatctttacgtgtggggtcttgtaaattcaaaggtaattgaagcatgaacttaaattggccttccggtttttcctaaggctatgaag 28276367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 28276548 - 28276460
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattata 95  Q
    |||||||||||| ||||| ||| ||||||||||| || ||||||||  ||||||||||| || |||| |||||||| | |||||||||||    
T  28276548 gacgtttctaacttagtcagtcgtcaagttgcacctgatgatcgcatggtgatccttacatgtgggg-cttactcttctagttgattata 28276460  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 5052695 - 5052644
Alignment:
Q  31 aagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||||||| || |||||| |||||||||||||||| ||||||||||||    
T  5052695 aagttgcacatgttggtcgcactgtgatccttacgtgcgaggtcttactctc 5052644  T

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Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 17101647 - 17101612
Alignment:
Q  41 tgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  17101647 tgctgatcgcacagtgatccttacgtgcggggtctt 17101612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 30121922 - 30121748
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccgatggctaattgcacgtgtt 128  Q
    ||||||||||| || ||||||||| |||||| |||| ||  ||| ||||||||| |  |||||| ||  | ||||||||| |||  || |||||| ||||    
T  30121922 tcaagttgcacctggtgatcgcacggtgatctttacatgtcgggccttactctctcgattgatt-tatctttatccctccaatgtttagttgcacatgtt 30121824  T
Q  129 gatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcc 204  Q
    |||| |||  |||||||||||||  ||||||| || | |||| | || ||||||| || |||||||||||| ||||    
T  30121823 gatcacacaatgatccttacgtgtagggtcttactctctcaatggtagttgaaacatagacttaaattggcgttcc 30121748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 24645151 - 24645233
Alignment:
Q  11 ttctaacctagtcggt-catcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgatt 92  Q
    |||||||||| ||||| | ||||||||||| |  |||| |||| |||||| |||||||||||||||||||||| |||| ||||    
T  24645151 ttctaacctaatcggttcgtcaagttgcacctaatgattgcacggtgatctttacgtgcggggtcttactctctcagtcgatt 24645233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 18448289 - 18448248
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  18448289 tgcacctgctgatcgcacggtgatccttacgtgcggggtctt 18448248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 25226492 - 25226527
Alignment:
Q  41 tgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    |||||||| |||||||||||||||||||||||||||    
T  25226492 tgctgatcacacagtgatccttacgtgcggggtctt 25226527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 74
Target Start/End: Original strand, 9642224 - 9642252
Alignment:
Q  46 atcgcacagtgatccttacgtgcggggtc 74  Q
    |||||||||||||||||||||||||||||    
T  9642224 atcgcacagtgatccttacgtgcggggtc 9642252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 34497427 - 34497491
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct 75  Q
    |||||||||| ||| |  ||||| |||||||||||||| |||  ||||||||||||| |||||||    
T  34497427 ttctaacctaatcgattgtcaagatgcacatgctgatcacacgatgatccttacgtgtggggtct 34497491  T

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Target: scaffold0671 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 288
Target Start/End: Original strand, 812 - 998
Alignment:
Q  102 tccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcat 201  Q
    ||||| |||||||||| ||||| || |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| |    
T  812 tcccttcgatggctaactgcacctgctgatcgcacgatgatccttacgtgcggggtcttgctagttcaaaggtaattgaaacataaacttaaattggctt 911  T
Q  202 tccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    || | | |||||||| |||||||||  ||| ||||| |||| || |||||  |||||||||||||| ||||||| ||||| ||||||    
T  912 tctaatgtttcccaatgcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatatcacactctctct 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 829 - 870
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  829 tgcacctgctgatcgcacgatgatccttacgtgcggggtctt 870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 138 - 288
Target Start/End: Original strand, 26252 - 26402
Alignment:
Q  138 gtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttcc 237  Q
    |||||||||| ||||| ||||||| || || |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||  ||| |||||    
T  26252 gtgatccttatgtgcgaggtcttgttaatttaaaggtaattgaaacataaacttaaattggcattccagtttttcccaaggaaatgaaggccaaggttcc 26351  T
Q  238 attagttcagcccaattatgaatcttaggatactcatagcacaccctctct 288  Q
    ||||||| ||||||  ||||||||||||||  |||||||||||||||||||    
T  26352 attagtttagcccatctatgaatcttaggacgctcatagcacaccctctct 26402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 280
Target Start/End: Original strand, 39897 - 40165
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccctccga 110  Q
    ||||||||||||||||  ||||| ||||| |||||| ||||| ||||||||||||| |||||||  ||| |||| | | ||  ||| | ||||||| |||    
T  39897 ttctaacctagtcggttgtcaagctgcacctgctgagcgcacggtgatccttacgtacggggtccaactatcccgggttatc-taggtatatcccttcga 39995  T
Q  111 tggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtttt 210  Q
    ||||||| || || || |||||||||| ||||||||| |||||||||||||| | || |||  ||||||| || ||||||||||||||| ||||    ||    
T  39996 tggctaactgtacctgctgatcgcacgatgatccttatgtgcggggtcttgcaaattgaaatgtaattgacacataaacttaaattggcgttcctaggtt 40095  T
Q  211 tcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcaca 280  Q
    ||| |||||||||||| ||||||||||   || ||  ||||  |||||||||||||| ||||||||||||    
T  40096 tccgaaggcaatgaagatcaatgttcctgaaggtcttcccatctatgaatcttaggacactcatagcaca 40165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 181494 - 181279
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||| |||| |||||| ||||||||||| || ||||| ||| |||||| ||||||| ||||||||| ||||||| ||||||| || | ||||||    
T  181494 gacgtttctaccctaatcggtcgtcaagttgcacctgttgatcacacggtgatcattacgtgtggggtcttaatctcccaattgattaaaggt-tatccc 181396  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
     | ||||||||||||||| || || || |||| ||||| | ||||| | ||||||| || ||||||| |||||||| | | |||||||||| || |||||    
T  181395 actgatggctaattgcacatgctggtcacacgatgatcttaacgtgtgtggtcttgttaattcaaaggtaattgaagcatgaacttaaatttgccttcca 181296  T
Q  206 gtttttcccaaggcaat 222  Q
    |||||||| ||||||||    
T  181295 gtttttcctaaggcaat 181279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 163887 - 163672
Alignment:
Q  6 gacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctcccagttgattatagttctatccc 105  Q
    |||||||||| |||| |||||| ||||||||||| || ||||| ||| |||||| ||||||| ||||||||| ||||||| ||||||| || | ||||||    
T  163887 gacgtttctaccctaatcggtcgtcaagttgcacctgttgatcacacggtgatcattacgtgtggggtcttaatctcccaattgattaaagat-tatccc 163789  T
Q  106 tccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
     | ||||||||| ||||| || || || ||   ||||| | ||||| | ||||||| || ||||||| |||||||| | | |||||||||| || |||||    
T  163788 actgatggctaaatgcacatgctggtcacaaaatgatcttaacgtgtgtggtcttgttaattcaaaggtaattgaagcatgaacttaaatttgccttcca 163689  T
Q  206 gtttttcccaaggcaat 222  Q
    ||||| || ||||||||    
T  163688 gttttacctaaggcaat 163672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 485 - 325
Alignment:
Q  135 acggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaa-cttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatg 233  Q
    |||||||||||||| ||||||||||| | || |  ||| |||||| || | |||||||||||||| |||||||||||||||||||||| ||||  ||| |    
T  485 acggtgatccttacatgcggggtcttaccatctttaagctaattgtaagcataaacttaaattggaattccagtttttcccaaggcaacgaaggccaagg 386  T
Q  234 ttccattagttcagcccaattatgaatcttaggatactcatagcacaccctctctctgctc 294  Q
    ||||||||||||| ||||   ||||||||||||| ||||||||||||||||||||| ||||    
T  385 ttccattagttcatcccatcaatgaatcttaggacactcatagcacaccctctctccgctc 325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 42916 - 42748
Alignment:
Q  109 gatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtt 208  Q
    ||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| || ||||||||||||||||||       
T  42916 gatggctaattgcacctgatgatcgcacggtgatccttacgtgtggggtcttgctaattcaaaggtaattgaaacatagacttaaattggcattccaaga 42817  T
Q  209 tttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagc 277  Q
    ||| | |||| |||||||  || ||||||  |||  || ||||  |||||||||||||| |||||||||    
T  42816 ttttcaaaggaaatgaaggccagtgttcctgtaggacaacccatctatgaatcttaggacactcatagc 42748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 51193 - 51292
Alignment:
Q  98 tctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattg 197  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||||| || ||||||||||    
T  51193 tctatcccactgatggctaattgcacttgttgatcgcacggtgatccttatgtgtggggtcttgttaattcaaagttaattgaaacatatacttaaattg 51292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 168085 - 167891
Alignment:
Q  11 ttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtct-tactctcccagttgattatagttctatccctccg 109  Q
    ||||||||||||| ||  ||||| ||||| || ||||||||| ||||||| |||||| ||||||| |||| || | ||||||  ||| | ||||||||||    
T  168085 ttctaacctagtcagttgtcaagctgcacctgttgatcgcacggtgatccatacgtgtggggtctatactatctcggttgatc-taggtatatccctccg 167987  T
Q  110 atggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattcca 205  Q
    |||||||| ||||| |  |||||||||| |||||||||  ||||||||||||||| ||||||| ||||| |||| || |||| ||||||| |||||    
T  167986 atggctaactgcacctactgatcgcacgatgatccttatatgcggggtcttgctaattcaaaggtaattaaaacatagacttgaattggcgttcca 167891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 70239 - 70365
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    ||||||||| |||||||| ||||| || ||||||||  |||||||||| |||||||||||||||| ||||||   ||||||| | |||||||||||||||    
T  70239 tatccctccaatggctaagtgcacctgctgatcgcatagtgatccttatgtgcggggtcttgctaattcaaatgcaattgaagcgtaaacttaaattggc 70338  T
Q  200 attccagtttttcccaaggcaatgaag 226  Q
     ||||||| ||||| ||||||||||||    
T  70339 tttccagtgtttcctaaggcaatgaag 70365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 70258 - 70299
Alignment:
Q  35 tgcacatgctgatcgcacagtgatccttacgtgcggggtctt 76  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||    
T  70258 tgcacctgctgatcgcatagtgatccttatgtgcggggtctt 70299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 103923 - 103809
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||||||||| | ||| || | ||||||||||||||||| | ||||||||| ||||| ||||||| |||||||||  |||||||||||||||    
T  103923 tatccctccgatggctaactacacttgctaatcgcacggtgatccttgcatgcggggtcgtgctaattcaaaggtaattgaaatataaacttaaattggc 103824  T
Q  200 attccagtttttccc 214  Q
     ||||||||||||||    
T  103823 tttccagtttttccc 103809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 276
Target Start/End: Original strand, 21643 - 21820
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaac-ttaaattgg 198  Q
    |||||||| |||| || | ||||| || |||||||||| |||||||||||| | ||||||||||| ||||||| |||||||||| ||||| ||| | |||    
T  21643 tatccctctgatgactcactgcacctgctgatcgcacgatgatccttacgtacagggtcttgctaattcaaaggtaattgaaacataaactttataatgg 21742  T
Q  199 cattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatag 276  Q
    | ||||| | ||||||||||||||||||  ||| ||||| |||| ||  |||  ||||||||||||||| ||||||||    
T  21743 ctttccattgtttcccaaggcaatgaaggacaaggttcccttaggtcttcccgtttatgaatcttaggacactcatag 21820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 153 - 27
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggc 199  Q
    |||||||||||||||||| ||||| || | |||||| ||||||||||||||||  |||||| ||| ||||||  |||||||||| |||||||||||| ||    
T  153 tatccctccgatggctaaatgcacctgctcatcgcatggtgatccttacgtgcaaggtctttctaattcaaacgtaattgaaacataaacttaaattagc 54  T
Q  200 attccagtttttcccaaggcaatgaag 226  Q
     ||| ||| |||||||||| |||||||    
T  53 tttcaagtgtttcccaaggaaatgaag 27  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 281
Target Start/End: Original strand, 55246 - 55442
Alignment:
Q  84 cagttgattatagttctatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaac 183  Q
    ||||||||| ||| ||||||| | |||||||||| ||||| |  |||||||||  |||||| ||| ||||||||||||||| ||||||| |||||||||     
T  55246 cagttgatt-taggtctatcctttcgatggctaactgcaccttctgatcgcacaatgatccgtacatgcggggtcttgctaattcaaaggtaattgaaat 55344  T
Q  184 ttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcatagcacac 281  Q
     || ||| ||||||||  ||||   ||||| ||||||||||||  |||| ||||  ||| ||| ||||  |||||||||| ||||||||||| |||||    
T  55345 atagactaaaattggcgatccaagatttccaaaggcaatgaaggccaatattcctgtagatcaacccatctatgaatctttggatactcataacacac 55442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 15980 - 16058
Alignment:
Q  100 tatccctccgatggctaattgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaatt 178  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||| |||||| ||||||| |||||    
T  15980 tatccctccgatggctaactgcacatgttgatcgcacggtggtccttacgtgcagggttttgctaattcaaaggtaatt 16058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 3560 - 3686
Alignment:
Q  118 ttgcacgtgttgatcgcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaact-taaacttaaattggcattccagtttttcccaa 216  Q
    |||||| || |||||||||| | ||||||||||| || ||||| |  | || ||| |||||||||   |||||||||||||||||||||||||||||| |    
T  3560 ttgcacctgctgatcgcacgataatccttacgtgtggagtcttaccgtctctaaggtaattgaaagaataaacttaaattggcattccagtttttccc-a 3658  T
Q  217 ggcaatgaagctcaatgttccattagtt 244  Q
    ||||||||||  ||||||||||||||||    
T  3659 ggcaatgaagaccaatgttccattagtt 3686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 288
Target Start/End: Complemental strand, 27628 - 27515
Alignment:
Q  175 aattgaaacttaaacttaaattggcattccagtttttcccaaggcaatgaagctcaatgttccattagttcagcccaattatgaatcttaggatactcat 274  Q
    ||||||||| ||||||||||||||| ||||| | ||||||||||||||||||  ||| ||||| |||| ||  | || |||||||||||||   |||| |    
T  27628 aattgaaacataaacttaaattggcgttccaatgtttcccaaggcaatgaaggccaaggttcccttaggtcgactcatttatgaatcttagagcactcgt 27529  T
Q  275 agcacaccctctct 288  Q
    ||||||||||||||    
T  27528 agcacaccctctct 27515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 89623 - 89570
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  89623 tcaagttgcacatgttgatcgcacattgatccttacgtgcgaggtcttactctc 89570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 19439 - 19492
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    ||||||||||| | |||||||||| |||||||||||||| ||||||||||||||    
T  19439 tcaagttgcacttactgatcgcacggtgatccttacgtgtggggtcttactctc 19492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 19454 - 19486
Alignment:
Q  128 tgatcgcacggtgatccttacgtgcggggtctt 160  Q
    |||||||||||||||||||||||| ||||||||    
T  19454 tgatcgcacggtgatccttacgtgtggggtctt 19486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 96495 - 96420
Alignment:
Q  133 gcacggtgatccttacgtgcggggtcttgctatttcaaagttaattgaaacttaaacttaaattggcattccagtt 208  Q
    |||| ||||||||||  |||||||||||| || ||||||| |||||||||  || |||||||||||| ||||||||    
T  96495 gcacagtgatccttatatgcggggtcttgttaattcaaaggtaattgaaatatagacttaaattggcgttccagtt 96420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 2605 - 2543
Alignment:
Q  11 ttctaacctagtcggt-catcaagttgcacatgctgatcgcacagtgatccttacgtgcgggg 72  Q
    |||||||||||| ||| ||||||||||||| ||||||||||   |||||||||||||||||||    
T  2605 ttctaacctagttggttcatcaagttgcacctgctgatcgcctggtgatccttacgtgcgggg 2543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 222803 - 222750
Alignment:
Q  29 tcaagttgcacatgctgatcgcacagtgatccttacgtgcggggtcttactctc 82  Q
    |||||||| || | ||| ||||||||||||||||||||||||| ||||||||||    
T  222803 tcaagttgaacttactggtcgcacagtgatccttacgtgcgggatcttactctc 222750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 461 - 394
Alignment:
Q  5 agacgtttctaacctagtcggtcatcaagttgcacatgctgatcgcacagtgatccttacgtgcggggt 73  Q
    |||||||| |||||||||||||  ||||| ||||| | |||||| ||| ||||||||||||||||||||    
T  461 agacgttt-taacctagtcggttgtcaagctgcaccttctgatcacacggtgatccttacgtgcggggt 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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