View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14211_high_7 (Length: 395)
Name: NF14211_high_7
Description: NF14211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14211_high_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 4 - 379
Target Start/End: Complemental strand, 4029060 - 4028688
Alignment:
| Q |
4 |
aatatgcacgaggggtttgcatgatgaatatttgttctttgataaagccattatttaattaattaatcaatgtcaatctcttcaagaatgaaacaaaata |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4029060 |
aatatgcacgaggggtttgcatgatgaatatttgttctttgataaagccattatttaattaattaatcaatgtcaatctcttcaagaatgaaacaaaata |
4028961 |
T |
|
| Q |
104 |
taaatatgtttaatcacactttgaaatgatcgttaccaccaagaatcaaactaataattgatgatgagtgtttgatgaatttctaattttgaccatagaa |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4028960 |
taaatatgtttaatcacactttgaaatgatcattaccaccaagaatcaaactaataattgatgatgagtgtttgatgaatatctaattttgaccataga- |
4028862 |
T |
|
| Q |
204 |
ttattagatccattaaattttcaaaatcactgaatcacgttggtgtttgatgaaaatggtaaaatgagaagtcacttttcatttcagaaactgtaaatga |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4028861 |
--attagatccattaaattttcaaaatcactgaatcacgttggtgtttgatgaaaatggtaaaatgagaagtcacttttcatttcagaaactgtaaatga |
4028764 |
T |
|
| Q |
304 |
catcacgttcttttacatcagttctggcctctgagcacaacacaggttctaggcagaatagtgtaaaggcatttaa |
379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4028763 |
catcacgttcttttacatcagttctggcctctgagcacaacacaggttctaggcagaatagtgtaaaggcatttaa |
4028688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University