View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14212_high_17 (Length: 275)

Name: NF14212_high_17
Description: NF14212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14212_high_17
NF14212_high_17
[»] chr6 (7 HSPs)
chr6 (15-155)||(383443-383583)
chr6 (178-275)||(383693-383790)
chr6 (111-160)||(12890812-12890862)
chr6 (111-158)||(28085613-28085661)
chr6 (111-160)||(9707007-9707054)
chr6 (111-155)||(33730202-33730247)
chr6 (111-155)||(34934830-34934875)
[»] chr1 (30 HSPs)
chr1 (105-159)||(4707217-4707272)
chr1 (111-157)||(32404525-32404571)
chr1 (111-159)||(22090333-22090382)
chr1 (111-159)||(41560466-41560515)
chr1 (111-159)||(44751721-44751770)
chr1 (111-158)||(1210982-1211030)
chr1 (111-158)||(25979228-25979276)
chr1 (111-158)||(30202127-30202175)
chr1 (111-158)||(38758017-38758065)
chr1 (111-158)||(38807668-38807716)
chr1 (111-158)||(43481795-43481843)
chr1 (111-157)||(29577489-29577536)
chr1 (112-158)||(34444594-34444641)
chr1 (111-157)||(44941774-44941821)
chr1 (112-157)||(696508-696554)
chr1 (111-156)||(8796446-8796492)
chr1 (111-160)||(25715324-25715371)
chr1 (111-160)||(52921317-52921364)
chr1 (110-154)||(43240380-43240425)
chr1 (111-155)||(49347393-49347438)
chr1 (111-158)||(2914120-2914168)
chr1 (111-158)||(4029359-4029407)
chr1 (111-158)||(4318842-4318890)
chr1 (111-158)||(15086159-15086207)
chr1 (111-162)||(21769707-21769756)
chr1 (111-158)||(28090691-28090739)
chr1 (111-158)||(37311752-37311800)
chr1 (111-158)||(41165519-41165567)
chr1 (111-158)||(51602293-51602341)
chr1 (111-154)||(52561590-52561634)
[»] chr5 (19 HSPs)
chr5 (110-160)||(28411912-28411963)
chr5 (110-158)||(28976856-28976905)
chr5 (111-159)||(29816619-29816668)
chr5 (111-158)||(4496621-4496669)
chr5 (111-158)||(12492381-12492429)
chr5 (111-157)||(408492-408539)
chr5 (111-157)||(13561384-13561431)
chr5 (112-158)||(14665950-14665997)
chr5 (111-161)||(42576247-42576298)
chr5 (111-161)||(2393114-2393164)
chr5 (111-159)||(1275501-1275550)
chr5 (111-155)||(3302081-3302126)
chr5 (111-158)||(2915493-2915541)
chr5 (112-155)||(3000977-3001021)
chr5 (111-158)||(10639539-10639587)
chr5 (117-160)||(13606992-13607036)
chr5 (111-154)||(20457010-20457054)
chr5 (111-158)||(26884686-26884734)
chr5 (111-158)||(30213812-30213860)
[»] chr8 (19 HSPs)
chr8 (111-160)||(11523718-11523768)
chr8 (105-158)||(21121376-21121430)
chr8 (111-159)||(36545386-36545435)
chr8 (111-158)||(490572-490620)
chr8 (111-158)||(1064957-1065005)
chr8 (111-158)||(14742079-14742127)
chr8 (111-157)||(1928585-1928632)
chr8 (105-159)||(42584589-42584644)
chr8 (112-157)||(10668495-10668541)
chr8 (111-156)||(25473402-25473448)
chr8 (111-159)||(15215408-15215457)
chr8 (111-159)||(35085133-35085182)
chr8 (111-155)||(44529462-44529507)
chr8 (111-155)||(45419472-45419517)
chr8 (114-157)||(35324013-35324057)
chr8 (111-154)||(36394949-36394993)
chr8 (115-158)||(41031417-41031461)
chr8 (115-158)||(41031523-41031567)
chr8 (111-158)||(44047529-44047577)
[»] chr7 (35 HSPs)
chr7 (111-160)||(2885717-2885767)
chr7 (111-160)||(11594197-11594247)
chr7 (110-158)||(14593988-14594037)
chr7 (110-158)||(16013511-16013560)
chr7 (111-159)||(42187678-42187727)
chr7 (111-158)||(12841272-12841320)
chr7 (111-158)||(28208325-28208373)
chr7 (111-158)||(29650621-29650669)
chr7 (111-158)||(31005442-31005490)
chr7 (111-158)||(31682599-31682647)
chr7 (111-158)||(39906369-39906417)
chr7 (111-158)||(43491545-43491593)
chr7 (111-158)||(44855171-44855219)
chr7 (110-156)||(21244282-21244329)
chr7 (112-158)||(32631802-32631849)
chr7 (111-157)||(37618182-37618229)
chr7 (111-156)||(7273337-7273383)
chr7 (111-156)||(27649017-27649063)
chr7 (111-156)||(31869101-31869147)
chr7 (111-160)||(40979926-40979973)
chr7 (111-160)||(45836477-45836527)
chr7 (112-156)||(1011284-1011329)
chr7 (113-158)||(12241683-12241728)
chr7 (110-158)||(12966252-12966301)
chr7 (111-159)||(28708618-28708667)
chr7 (110-154)||(34745983-34746028)
chr7 (111-159)||(43281911-43281960)
chr7 (111-158)||(6375105-6375153)
chr7 (111-158)||(9210701-9210749)
chr7 (111-158)||(22349857-22349905)
chr7 (111-158)||(33349803-33349851)
chr7 (111-158)||(36869234-36869282)
chr7 (111-158)||(38900194-38900241)
chr7 (111-158)||(40630671-40630719)
chr7 (113-156)||(47652786-47652830)
[»] chr4 (26 HSPs)
chr4 (111-160)||(39100531-39100581)
chr4 (111-160)||(52569510-52569560)
chr4 (111-159)||(436466-436515)
chr4 (110-158)||(31961263-31961312)
chr4 (111-158)||(21528525-21528573)
chr4 (111-158)||(30634103-30634151)
chr4 (111-158)||(45209202-45209250)
chr4 (111-158)||(46153945-46153993)
chr4 (111-158)||(50238612-50238660)
chr4 (111-158)||(50238698-50238746)
chr4 (111-155)||(51811280-51811323)
chr4 (111-158)||(55007983-55008031)
chr4 (111-158)||(56130407-56130455)
chr4 (110-160)||(45184128-45184179)
chr4 (111-160)||(4879104-4879154)
chr4 (111-160)||(12494900-12494950)
chr4 (111-155)||(31959814-31959859)
chr4 (111-155)||(48622543-48622588)
chr4 (111-158)||(6957835-6957883)
chr4 (111-158)||(8286676-8286724)
chr4 (111-158)||(19061932-19061980)
chr4 (111-158)||(19969418-19969466)
chr4 (111-154)||(26024851-26024895)
chr4 (111-158)||(40932921-40932969)
chr4 (111-158)||(48174090-48174138)
chr4 (116-163)||(49416949-49416994)
[»] chr2 (28 HSPs)
chr2 (110-159)||(12489798-12489848)
chr2 (111-160)||(25834915-25834965)
chr2 (110-158)||(44437718-44437767)
chr2 (111-158)||(227426-227474)
chr2 (111-158)||(3635320-3635368)
chr2 (111-158)||(4807832-4807880)
chr2 (111-158)||(9531597-9531645)
chr2 (111-158)||(17670705-17670753)
chr2 (111-158)||(30306269-30306317)
chr2 (111-158)||(35643185-35643233)
chr2 (111-158)||(38328367-38328415)
chr2 (111-158)||(43573127-43573175)
chr2 (111-157)||(12520060-12520107)
chr2 (111-158)||(38430121-38430168)
chr2 (111-160)||(12474925-12474972)
chr2 (111-156)||(28508915-28508961)
chr2 (111-160)||(38452684-38452731)
chr2 (110-159)||(42543471-42543521)
chr2 (111-159)||(7326156-7326205)
chr2 (111-155)||(41763043-41763088)
chr2 (111-158)||(451645-451693)
chr2 (111-151)||(3720420-3720460)
chr2 (111-158)||(3866309-3866357)
chr2 (111-158)||(12734937-12734985)
chr2 (111-158)||(12882042-12882090)
chr2 (111-158)||(15775842-15775890)
chr2 (117-160)||(37520689-37520733)
chr2 (116-159)||(38429651-38429695)
[»] chr3 (21 HSPs)
chr3 (105-161)||(14415257-14415311)
chr3 (112-160)||(48532196-48532245)
chr3 (111-158)||(311306-311354)
chr3 (111-158)||(5169069-5169117)
chr3 (111-158)||(12096702-12096750)
chr3 (111-158)||(48508472-48508520)
chr3 (111-157)||(52139037-52139084)
chr3 (112-158)||(53262379-53262426)
chr3 (111-160)||(31566159-31566206)
chr3 (111-156)||(39512780-39512826)
chr3 (111-160)||(49503563-49503613)
chr3 (111-160)||(52156079-52156129)
chr3 (113-157)||(944457-944501)
chr3 (110-158)||(2912848-2912896)
chr3 (111-158)||(7895877-7895925)
chr3 (113-156)||(37083291-37083335)
chr3 (111-158)||(45374474-45374522)
chr3 (111-158)||(45834597-45834645)
chr3 (111-158)||(47555329-47555377)
chr3 (111-158)||(52927845-52927893)
chr3 (111-158)||(53519817-53519865)
[»] scaffold0168 (1 HSPs)
scaffold0168 (111-158)||(28886-28934)
[»] scaffold0018 (1 HSPs)
scaffold0018 (111-158)||(31705-31753)
[»] scaffold1318 (1 HSPs)
scaffold1318 (111-156)||(568-614)
[»] scaffold0157 (1 HSPs)
scaffold0157 (111-160)||(25527-25577)


Alignment Details
Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 383443 - 383583
Alignment:
Q  15 agatacatccaatccccatcgatgaaaactgtcacccgtcacagaaggggtgaatcctcaatctctaccaagcatgccacttnnnnnnnctttgatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||    
T  383443 agatacatccaatccccatcgatgaaaactgtcacccgtcacagaaggggtgaatcctcaatctctaccaagcatgccacttaaaaaaactttgatcatg 383542  T
Q  115 tagccgaccacactgagtgggataaggcttgttgttgttgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  383543 tagccgaccacactgagtgggataaggcttgttgttgttgt 383583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 383693 - 383790
Alignment:
Q  178 tagtaatgatgctagtgcttgtaataaattttgtatcaacttcattgcaaactaaaatgctatgattaaaaggcaacccggtggactgaagctcccgc 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  383693 tagtaatgatgctagtgcttgtaataaattttgtatcaacttcattgcaaactaaaatgctatgattaaagggcaacccggtggactgaagctcccgc 383790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12890812 - 12890862
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  12890812 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 12890862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 28085613 - 28085661
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  28085613 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 28085661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 9707007 - 9707054
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  9707007 catgtagccgaccccacttagtgggataaggcttg--gttgttgttgtat 9707054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 33730202 - 33730247
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  33730202 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 33730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 34934875 - 34934830
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  34934875 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 34934830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 4707272 - 4707217
Alignment:
Q  105 tttgatcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  4707272 tttgatcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgta 4707217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 32404571 - 32404525
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttg 157  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||    
T  32404571 catgtagccgaccccacttagtgggataaggctggttgttgttgttg 32404525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 22090333 - 22090382
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  22090333 catgtagccgaccccactaagtgggataaggcttggttgttgttgttgta 22090382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 41560466 - 41560515
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  41560466 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgta 41560515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 44751721 - 44751770
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  44751721 catgtagccgacctcacttagtgggataaggcttggttgttgttgttgta 44751770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 1210982 - 1211030
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  1210982 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 1211030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 25979276 - 25979228
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  25979276 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 25979228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 30202175 - 30202127
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  30202175 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 30202127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 38758065 - 38758017
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  38758065 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 38758017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 38807716 - 38807668
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  38807716 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 38807668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 43481843 - 43481795
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  43481843 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 43481795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 29577489 - 29577536
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  29577489 catgtagccgaccccacttagtgggataaggcttggttgttgttgttg 29577536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 34444594 - 34444641
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  34444594 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 34444641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 44941821 - 44941774
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  44941821 catgtagccgaccccacttagtgggataaggcttggttgttgttgttg 44941774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 696508 - 696554
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  696508 atgtagccgaccccacttagtgggataaggcttggttgttgttgttg 696554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 8796446 - 8796492
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  8796446 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 8796492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 25715371 - 25715324
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  25715371 catgtagccgacctcacttagtgggataaggcttg--gttgttgttgtat 25715324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 52921317 - 52921364
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  52921317 catgtagccgaccccacttagtgggataaggcttg--gttgttgttgtat 52921364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 43240425 - 43240380
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttg 154  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||    
T  43240425 tcatgtagccgacctcacttagtgggataaggcttagttgttgttg 43240380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 49347438 - 49347393
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  49347438 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 49347393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 2914168 - 2914120
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  2914168 catgtagccaaccccacttagtgggataaggcttggttgttgttgttgt 2914120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 4029359 - 4029407
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||| ||| ||||||||||||||    
T  4029359 catgtagccgaccccacttagtgggataagacttggttgttgttgttgt 4029407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 4318890 - 4318842
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  4318890 catgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgt 4318842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 15086159 - 15086207
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  15086159 catgtagccaaccccacttagtgggataaggcttggttgttgttgttgt 15086207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 21769756 - 21769707
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtatgg 162  Q
    ||||||||||||| |||| |||| |||||||||||  |||||||||||||||    
T  21769756 catgtagccgaccccacttagtgtgataaggcttg--gttgttgttgtatgg 21769707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 28090739 - 28090691
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||| ||| ||||||||||||||    
T  28090739 catgtagccgaccccacttagtgggataagacttggttgttgttgttgt 28090691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 37311800 - 37311752
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  37311800 catgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgt 37311752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 41165519 - 41165567
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  41165519 catgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgt 41165567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 51602293 - 51602341
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  51602293 catgtagccaaccccacttagtgggataaggcttggttgttgttgttgt 51602341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 52561634 - 52561590
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttg 154  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||    
T  52561634 catgtagccgaccccacttagtgggataaggcttggttgttgttg 52561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 28411912 - 28411963
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  28411912 tcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 28411963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 28976905 - 28976856
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  28976905 tcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 28976856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 29816619 - 29816668
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  29816619 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgta 29816668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 4496621 - 4496669
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  4496621 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 4496669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 12492429 - 12492381
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  12492429 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 12492381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 408539 - 408492
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  408539 catgtagccgaccccacttagtgggataaggcttggttgttgttgttg 408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 13561431 - 13561384
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttgttg 157  Q
    ||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  13561431 catgtagccgaccccacttagtgggataaggcttgtttgttgttgttg 13561384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 14665950 - 14665997
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  14665950 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 14665997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 42576247 - 42576298
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtatg 161  Q
    |||||||||||||  ||| ||||||||||||||| |||||||||||||||||    
T  42576247 catgtagccgacccgacttagtgggataaggcttggttgttgttgttgtatg 42576298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 2393114 - 2393164
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtatg 161  Q
    ||||||||||| | |||| | |||||||| |||||||||||||||||||||    
T  2393114 catgtagccgatcccacttaatgggataaagcttgttgttgttgttgtatg 2393164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 1275501 - 1275550
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggc-ttgttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||| | |||||||||||||||    
T  1275501 catgtagccgaccccacttagtgggataaggcatagttgttgttgttgta 1275550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 3302081 - 3302126
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  3302081 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 3302126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 2915541 - 2915493
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||| ||||||||||    
T  2915541 catgtagccgaccccacttagtgggataaggcttggttattgttgttgt 2915493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 3000977 - 3001021
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  3000977 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 3001021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 10639539 - 10639587
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| ||||  |||||||||||||| ||||||||||||||    
T  10639539 catgtagccgaccccactttgtgggataaggcttggttgttgttgttgt 10639587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 13607036 - 13606992
Alignment:
Q  117 gccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||    
T  13607036 gccgaccccacttagtgggataaggcttggttgttgttgttgtat 13606992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 20457010 - 20457054
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttg 154  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||    
T  20457010 catgtagccgaccccacttagtgggataaggcttgattgttgttg 20457054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 26884734 - 26884686
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||| |||||||||| |||||||||||||    
T  26884734 catgtagccgaccccacttagtggaataaggcttgattgttgttgttgt 26884686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 30213812 - 30213860
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| |||||| |||||||    
T  30213812 catgtagccgaccccacttagtgggataaggcttggttgtttttgttgt 30213860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 11523768 - 11523718
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  11523768 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 11523718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 21121376 - 21121430
Alignment:
Q  105 tttgatcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  21121376 tttgatcatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgt 21121430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 36545386 - 36545435
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  36545386 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgta 36545435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 490572 - 490620
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttgttgt 158  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  490572 catgtagccgaccccacttagtgggataaggcttgtttgttgttgttgt 490620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 1064957 - 1065005
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  1064957 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 1065005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 14742127 - 14742079
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  14742127 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 14742079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 1928632 - 1928585
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  1928632 catgtagccgaccccacttagtgggataaggcttggttgttgttgttg 1928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 42584589 - 42584644
Alignment:
Q  105 tttgatcatgtagccgaccacactgagtgggataaggcttg-ttgttgttgttgta 159  Q
    ||||||| ||||||||||| |||| ||||||||||| |||| ||||||||||||||    
T  42584589 tttgatcttgtagccgaccccacttagtgggataagacttgattgttgttgttgta 42584644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 10668541 - 10668495
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  10668541 atgtagccgacctcacttagtgggataaggcttggttgttgttgttg 10668495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 25473448 - 25473402
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  25473448 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 25473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 15215457 - 15215408
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||||||||||    
T  15215457 catgtagccgaccccacttagtaggataaggcttggttgttgttgttgta 15215408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 35085182 - 35085133
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| |||||||||||| || |||||||||||||||    
T  35085182 catgtagccgaccccacttagtgggataagggttagttgttgttgttgta 35085133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 44529462 - 44529507
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  44529462 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 44529507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 45419472 - 45419517
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  45419472 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 45419517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 35324013 - 35324057
Alignment:
Q  114 gtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||    
T  35324013 gtagccgaccccacttagtgggataaggcttggttgttgttgttg 35324057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 36394993 - 36394949
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttg 154  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||    
T  36394993 catgtagccgaccccacttagtgggataaggcttcgttgttgttg 36394949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 41031461 - 41031417
Alignment:
Q  115 tagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||    
T  41031461 tagccgaccccacttagtgggataaggcttggttgttgttgttgt 41031417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 41031567 - 41031523
Alignment:
Q  115 tagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||    
T  41031567 tagccgaccccacttagtgggataaggcttggttgttgttgttgt 41031523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 44047577 - 44047529
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||| |||| |||| ||||||||||||||| ||||||||||||||    
T  44047577 catgtagctgaccccacttagtgggataaggcttggttgttgttgttgt 44047529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 2885767 - 2885717
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  2885767 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 2885717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 11594197 - 11594247
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  11594197 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 11594247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 14593988 - 14594037
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  14593988 tcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 14594037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 16013511 - 16013560
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  16013511 tcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 16013560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 42187678 - 42187727
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggc-ttgttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  42187678 catgtagccgaccccacttagtgggataaggctttgttgttgttgttgta 42187727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 12841320 - 12841272
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  12841320 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 12841272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 28208373 - 28208325
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  28208373 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 28208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 29650621 - 29650669
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  29650621 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 29650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 31005442 - 31005490
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  31005442 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 31005490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 31682647 - 31682599
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  31682647 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 31682599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 39906417 - 39906369
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  39906417 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 39906369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 43491545 - 43491593
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  43491545 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 43491593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 44855219 - 44855171
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  44855219 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 44855171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 21244329 - 21244282
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  21244329 tcatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 21244282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 32631802 - 32631849
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  32631802 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 32631849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 37618182 - 37618229
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  37618182 catgtagccgaccccacttagtgggataaggcttggttgttgttgttg 37618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 7273337 - 7273383
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttgtt 156  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||    
T  7273337 catgtagccgaccccacttagtgggataaggcttgattgttgttgtt 7273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 27649017 - 27649063
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  27649017 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 27649063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 31869147 - 31869101
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  31869147 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 31869101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 40979973 - 40979926
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  40979973 catgtagccgaccccacttagtgggataaggcttg--gttgttgttgtat 40979926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 45836527 - 45836477
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggct-tgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||  ||||||||||||||||    
T  45836527 catgtagccgaccccacttagtgggataaggctcggttgttgttgttgtat 45836477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 1011284 - 1011329
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||    
T  1011284 atgtagccgaccccacttagtgggataaggcttggttgttgttgtt 1011329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 12241728 - 12241683
Alignment:
Q  113 tgtagccgaccacactgagtgggataaggcttgttgttgttgttgt 158  Q
    ||||||||||| |||| |||||||||||||||| | ||||||||||    
T  12241728 tgtagccgaccccacttagtgggataaggcttggttttgttgttgt 12241683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 12966252 - 12966301
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||| | |||| ||||||||||||||| ||||||||||||||    
T  12966252 tcatgtagccgatcccacttagtgggataaggcttggttgttgttgttgt 12966301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 28708618 - 28708667
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||||| |||| ||||||||||    
T  28708618 catgtagccgaccccacttagtgggataaggcttggttgatgttgttgta 28708667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 34745983 - 34746028
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttg 154  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||    
T  34745983 tcatgtagccgaccccacttagtgggataaggcttggttgttgttg 34746028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 43281911 - 43281960
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||| ||||||| |||||||||||||||    
T  43281911 catgtagccgaccccacttagtgggacaaggcttggttgttgttgttgta 43281960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 6375105 - 6375153
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| |||||||| |||||    
T  6375105 catgtagccgaccccacttagtgggataaggcttggttgttgtcgttgt 6375153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 9210749 - 9210701
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||| |||| |||| ||||||||||||||| ||||||||||||||    
T  9210749 catgtagctgaccccacttagtgggataaggcttcgttgttgttgttgt 9210701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 22349857 - 22349905
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttgttgt 158  Q
    ||||||| ||||| |||| |||||||||||||||| |||||||||||||    
T  22349857 catgtagtcgaccccacttagtgggataaggcttgattgttgttgttgt 22349905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 33349851 - 33349803
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| | ||||||||||||| ||||||||||||||    
T  33349851 catgtagccgacctcacttaatgggataaggcttggttgttgttgttgt 33349803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 36869282 - 36869234
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| | ||||||||||||| ||||||||||||||    
T  36869282 catgtagccgaccccacttaatgggataaggcttggttgttgttgttgt 36869234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 38900194 - 38900241
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  38900194 catgtagccgacc-cacttagtgggataaggcttggttgttgttgttgt 38900241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 40630671 - 40630719
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  40630671 catgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgt 40630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 47652786 - 47652830
Alignment:
Q  113 tgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||    
T  47652786 tgtagccgaccccacttagtgggataaggcttggttgttgttgtt 47652830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 39100581 - 39100531
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  39100581 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 39100531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 52569560 - 52569510
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  52569560 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 52569510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 436466 - 436515
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  436466 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgta 436515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 31961312 - 31961263
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  31961312 tcatgtagccgacctcacttagtgggataaggcttggttgttgttgttgt 31961263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 21528525 - 21528573
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  21528525 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 21528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 30634151 - 30634103
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  30634151 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 30634103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 45209250 - 45209202
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  45209250 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 45209202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 46153945 - 46153993
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  46153945 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 46153993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 50238660 - 50238612
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  50238660 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 50238612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 50238746 - 50238698
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  50238746 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 50238698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 51811323 - 51811280
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  51811323 catgtagccgacc-cacttagtgggataaggcttgttgttgttgt 51811280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 55007983 - 55008031
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  55007983 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 55008031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 56130407 - 56130455
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  56130407 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 56130455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 45184179 - 45184128
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||| ||||||    
T  45184179 tcatgtagccgaccccacttagtgggataaggcttagttgttgttattgtat 45184128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 4879154 - 4879104
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| | ||||||||||||| ||||||||||||||||    
T  4879154 catgtagccgacctcacttactgggataaggcttggttgttgttgttgtat 4879104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12494900 - 12494950
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    |||||||| |||| |||| ||||||||||||||| ||||||||||||||||    
T  12494900 catgtagcggaccccacttagtgggataaggcttggttgttgttgttgtat 12494950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 31959859 - 31959814
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  31959859 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 48622588 - 48622543
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  48622588 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 48622543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 6957835 - 6957883
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||| | |||| ||||||||||||||| ||||||||||||||    
T  6957835 catgtagccgatcccacttagtgggataaggcttggttgttgttgttgt 6957883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 8286676 - 8286724
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||| || |||| ||||||||||||||| ||||||||||||||    
T  8286676 catgtagccgcccccacttagtgggataaggcttggttgttgttgttgt 8286724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 19061980 - 19061932
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  19061980 catgtagccgaccccacctagtgggataaggcttggttgttgttgttgt 19061932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 19969418 - 19969466
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggct-tgttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  19969418 catgtagccgaccccacttagtgggataaggctcggttgttgttgttgt 19969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 26024895 - 26024851
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttg 154  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||    
T  26024895 catgtagccgacctcacttagtgggataaggcttggttgttgttg 26024851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 40932969 - 40932921
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttgttgt 158  Q
    ||||||||||||| ||||  ||||||||||||||| |||||||||||||    
T  40932969 catgtagccgaccccacttggtgggataaggcttgattgttgttgttgt 40932921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 48174138 - 48174090
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||| |||| |||| ||||||||||||||| ||||||||||||||    
T  48174138 catgtagcagaccccacttagtgggataaggcttggttgttgttgttgt 48174090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 49416949 - 49416994
Alignment:
Q  116 agccgaccacactgagtgggataaggcttgttgttgttgttgtatggt 163  Q
    |||||||| |||| ||||||||||||||||  ||||||||||||||||    
T  49416949 agccgaccccacttagtgggataaggcttg--gttgttgttgtatggt 49416994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 12489848 - 12489798
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  12489848 tcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgta 12489798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 25834915 - 25834965
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  25834915 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 25834965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 44437767 - 44437718
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  44437767 tcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 44437718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 227426 - 227474
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  227426 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 227474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 3635368 - 3635320
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  3635368 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 3635320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 4807832 - 4807880
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  4807832 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 4807880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 9531645 - 9531597
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  9531645 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 9531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 17670705 - 17670753
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  17670705 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 17670753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 30306269 - 30306317
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  30306269 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 30306317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 35643185 - 35643233
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  35643185 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 35643233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 38328415 - 38328367
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  38328415 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 38328367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 43573175 - 43573127
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  43573175 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 43573127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 12520107 - 12520060
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  12520107 catgtagccgaccccacttagtgggataaggcttggttgttgttgttg 12520060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 38430121 - 38430168
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgt 158  Q
    ||||||||||||| |||| |||| ||||||||||| ||||||||||||    
T  38430121 catgtagccgaccccacttagtgagataaggcttggtgttgttgttgt 38430168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 12474972 - 12474925
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  12474972 catgtagccgaccccacttagtgggataaggcttg--gttgttgttgtat 12474925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 28508915 - 28508961
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  28508915 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 28508961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 38452731 - 38452684
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  38452731 catgtagccgaccccacttagtgggataaggcttg--gttgttgttgtat 38452684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 42543471 - 42543521
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||||| || |||| ||||||||||||||| |||||||||||||||    
T  42543471 tcatgtagccggccccacttagtgggataaggcttggttgttgttgttgta 42543521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 7326205 - 7326156
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    ||||||||| ||| |||| ||||||||||||||| |||||||||||||||    
T  7326205 catgtagccaaccccacttagtgggataaggcttggttgttgttgttgta 7326156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 41763088 - 41763043
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgt 155  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  41763088 catgtagccgaccccacttagtgggataaggcttggttgttgttgt 41763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 451693 - 451645
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  451693 catgtagccgaccccacttagtgggacaaggcttggttgttgttgttgt 451645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 3720460 - 3720420
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttg 151  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  3720460 catgtagccgaccccacttagtgggagaaggcttgttgttg 3720420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 3866309 - 3866357
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||| ||||||||||| ||||||||||||||    
T  3866309 catgtagccgaccccacttagtaggataaggcttggttgttgttgttgt 3866357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 12734937 - 12734985
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||| ||||| |||| ||||||||||||||| ||||||||||||||    
T  12734937 catgtagtcgaccccacttagtgggataaggcttggttgttgttgttgt 12734985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 12882090 - 12882042
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  12882090 catgtagcctacctcacttagtgggataaggcttggttgttgttgttgt 12882042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 15775890 - 15775842
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||| ||||||||| ||||||||||||||    
T  15775890 catgtagccgaccccacttagtggaataaggcttggttgttgttgttgt 15775842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 37520689 - 37520733
Alignment:
Q  117 gccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||    
T  37520689 gccgaccccacttagtgggataaggcttggttgttgttgttgtat 37520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 38429651 - 38429695
Alignment:
Q  116 agccgaccacactgagtgggataaggctt-gttgttgttgttgta 159  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||    
T  38429651 agccgaccccacttagtgggataaggcttggttgttgttgttgta 38429695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 14415311 - 14415257
Alignment:
Q  105 tttgatcatgtagccgaccacactgagtgggataaggcttgttgttgttgttgtatg 161  Q
    ||||||||||||||||||| |||| ||||||||||| ||||  ||||||||||||||    
T  14415311 tttgatcatgtagccgaccccacttagtgggataagacttg--gttgttgttgtatg 14415257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 48532196 - 48532245
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  48532196 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtat 48532245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 311354 - 311306
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  311354 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 5169069 - 5169117
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  5169069 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 5169117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 12096750 - 12096702
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  12096750 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 12096702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 48508472 - 48508520
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  48508472 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 48508520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 52139037 - 52139084
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttg 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  52139037 catgtagccgaccccacttagtgggataaggcttggttgttgttgttg 52139084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 53262379 - 53262426
Alignment:
Q  112 atgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  53262379 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 53262426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 31566206 - 31566159
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  31566206 catgtagccgaccccacttagtgggataaggcttg--gttgttgttgtat 31566159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 39512780 - 39512826
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  39512780 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 39512826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 49503613 - 49503563
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    |||||||||||||  ||| ||||||||||||||| ||||||||||||||||    
T  49503613 catgtagccgaccctacttagtgggataaggcttggttgttgttgttgtat 49503563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 52156129 - 52156079
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggct-tgttgttgttgttgtat 160  Q
    ||||||||||||| |||| ||||||||||||||  ||||||||||||||||    
T  52156129 catgtagccgaccccacttagtgggataaggctcggttgttgttgttgtat 52156079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 944501 - 944457
Alignment:
Q  113 tgtagccgaccacactgagtgggataaggcttgttgttgttgttg 157  Q
    ||||||||||| |||| |||||||||||||||| | |||||||||    
T  944501 tgtagccgaccccacttagtgggataaggcttggtcttgttgttg 944457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 2912848 - 2912896
Alignment:
Q  110 tcatgtagccgaccacactgagtgggataaggcttgttgttgttgttgt 158  Q
    ||||||||||||||  ||| | ||||||||| |||||||||||||||||    
T  2912848 tcatgtagccgacccgactcactgggataagacttgttgttgttgttgt 2912896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 7895925 - 7895877
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| | ||||||||||||| ||||||||||||||    
T  7895925 catgtagccgaccccacttaatgggataaggcttggttgttgttgttgt 7895877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 37083335 - 37083291
Alignment:
Q  113 tgtagccgaccacactgagtgggataaggctt-gttgttgttgtt 156  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||    
T  37083335 tgtagccgaccccacttagtgggataaggcttggttgttgttgtt 37083291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 45374522 - 45374474
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    |||||||| |||| |||| ||||||||||||||| ||||||||||||||    
T  45374522 catgtagctgaccccacttagtgggataaggcttggttgttgttgttgt 45374474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 45834645 - 45834597
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  45834645 catgtagccaaccccacttagtgggataaggcttggttgttgttgttgt 45834597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 47555377 - 47555329
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  47555377 catgtagccaaccccacttagtgggataaggcttggttgttgttgttgt 47555329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 52927893 - 52927845
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||| ||||||    
T  52927893 catgtagccgaccccacttagtgggataaggcttggttgttgatgttgt 52927845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 53519817 - 53519865
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  53519817 catgtagccgaccccacttagtgagataaggcttggttgttgttgttgt 53519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 28934 - 28886
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  28934 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 28886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 31705 - 31753
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgt 158  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  31705 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 31753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 568 - 614
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggcttg-ttgttgttgtt 156  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||    
T  568 catgtagccgaccccacttagtgggataaggcttgattgttgttgtt 614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 25577 - 25527
Alignment:
Q  111 catgtagccgaccacactgagtgggataaggctt-gttgttgttgttgtat 160  Q
    |||||||| |||| |||| ||||||||||||||| ||||||||||||||||    
T  25577 catgtagcggaccccacttagtgggataaggcttggttgttgttgttgtat 25527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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