View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14212_low_10 (Length: 388)

Name: NF14212_low_10
Description: NF14212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14212_low_10
NF14212_low_10
[»] chr2 (25 HSPs)
chr2 (1-370)||(33041510-33041875)
chr2 (301-370)||(3439006-3439071)
chr2 (301-370)||(28153089-28153154)
chr2 (301-370)||(28194690-28194755)
chr2 (302-370)||(29449506-29449570)
chr2 (301-370)||(44822481-44822547)
chr2 (301-370)||(22653591-22653656)
chr2 (301-370)||(33228880-33228945)
chr2 (305-370)||(34614037-34614098)
chr2 (301-353)||(37486880-37486928)
chr2 (336-370)||(34149658-34149692)
chr2 (336-370)||(43057898-43057932)
chr2 (312-370)||(39408648-39408702)
chr2 (301-370)||(1309073-1309138)
chr2 (301-370)||(1844875-1844940)
chr2 (301-370)||(6331619-6331684)
chr2 (301-370)||(11189986-11190051)
chr2 (301-370)||(18278364-18278429)
chr2 (301-370)||(18694843-18694908)
chr2 (301-370)||(20296476-20296541)
chr2 (301-370)||(36005500-36005565)
chr2 (301-370)||(38400372-38400437)
chr2 (301-370)||(40535396-40535461)
chr2 (301-370)||(41509574-41509639)
chr2 (301-370)||(44186501-44186566)
[»] chr6 (19 HSPs)
chr6 (301-370)||(22997394-22997459)
chr6 (301-370)||(23790942-23791007)
chr6 (301-370)||(7177353-7177418)
chr6 (301-370)||(7545387-7545452)
chr6 (301-370)||(7581102-7581167)
chr6 (301-370)||(31802111-31802176)
chr6 (301-368)||(26347464-26347527)
chr6 (312-370)||(13158667-13158721)
chr6 (312-370)||(13163523-13163577)
chr6 (301-370)||(743621-743686)
chr6 (301-370)||(2816948-2817013)
chr6 (301-370)||(10517257-10517322)
chr6 (301-370)||(13116571-13116636)
chr6 (301-370)||(19953775-19953840)
chr6 (301-370)||(27218942-27219007)
chr6 (301-370)||(28148680-28148745)
chr6 (301-370)||(31803542-31803607)
chr6 (301-370)||(32611501-32611566)
chr6 (301-370)||(33646893-33646958)
[»] chr1 (25 HSPs)
chr1 (301-370)||(24333622-24333691)
chr1 (301-370)||(2754418-2754483)
chr1 (301-370)||(7180561-7180626)
chr1 (301-370)||(21265714-21265779)
chr1 (301-370)||(44732691-44732756)
chr1 (301-370)||(48638590-48638655)
chr1 (307-370)||(23234009-23234068)
chr1 (301-371)||(40375262-40375328)
chr1 (301-370)||(1570139-1570204)
chr1 (301-370)||(3560328-3560393)
chr1 (301-370)||(6438011-6438076)
chr1 (301-370)||(7191090-7191155)
chr1 (301-370)||(11215059-11215124)
chr1 (301-370)||(12048071-12048136)
chr1 (301-370)||(12650331-12650396)
chr1 (301-370)||(15819548-15819613)
chr1 (301-370)||(25999908-25999973)
chr1 (301-370)||(27642674-27642739)
chr1 (301-370)||(28564292-28564357)
chr1 (301-370)||(29188694-29188759)
chr1 (301-370)||(32594309-32594374)
chr1 (305-361)||(34557275-34557326)
chr1 (301-370)||(39346926-39346991)
chr1 (301-370)||(40519490-40519555)
chr1 (301-370)||(45333659-45333724)
[»] chr8 (27 HSPs)
chr8 (301-370)||(21133065-21133130)
chr8 (301-370)||(38344107-38344172)
chr8 (301-370)||(1337062-1337127)
chr8 (301-370)||(5570952-5571017)
chr8 (301-370)||(6942478-6942543)
chr8 (301-370)||(44673595-44673660)
chr8 (301-369)||(10568144-10568208)
chr8 (307-370)||(5332974-5333033)
chr8 (311-370)||(37290980-37291035)
chr8 (336-370)||(38107452-38107486)
chr8 (307-369)||(11491856-11491914)
chr8 (301-370)||(22274559-22274623)
chr8 (301-370)||(2787028-2787093)
chr8 (301-370)||(8034359-8034424)
chr8 (301-370)||(10736821-10736886)
chr8 (301-370)||(13647404-13647469)
chr8 (301-370)||(13747829-13747894)
chr8 (301-370)||(16449183-16449248)
chr8 (301-370)||(17072510-17072575)
chr8 (301-370)||(17575696-17575761)
chr8 (301-370)||(28909523-28909588)
chr8 (301-370)||(34472355-34472420)
chr8 (301-370)||(37717421-37717486)
chr8 (301-370)||(38219515-38219580)
chr8 (301-370)||(39169543-39169608)
chr8 (301-370)||(43186911-43186976)
chr8 (301-370)||(43283913-43283978)
[»] chr5 (29 HSPs)
chr5 (301-370)||(27798679-27798744)
chr5 (302-370)||(16789128-16789192)
chr5 (304-370)||(42525458-42525520)
chr5 (301-370)||(6558859-6558924)
chr5 (301-370)||(11897306-11897371)
chr5 (301-370)||(15241454-15241519)
chr5 (301-370)||(16603456-16603521)
chr5 (301-370)||(18026775-18026840)
chr5 (301-370)||(39886159-39886224)
chr5 (301-370)||(41319398-41319463)
chr5 (302-370)||(11786008-11786072)
chr5 (311-370)||(41930163-41930218)
chr5 (307-361)||(4153614-4153664)
chr5 (301-334)||(10241386-10241419)
chr5 (301-370)||(34208432-34208496)
chr5 (301-370)||(4745823-4745888)
chr5 (338-370)||(7171786-7171818)
chr5 (301-370)||(8968807-8968872)
chr5 (301-370)||(9835091-9835156)
chr5 (301-370)||(11795551-11795616)
chr5 (301-370)||(12463814-12463879)
chr5 (301-370)||(16386688-16386753)
chr5 (301-370)||(20707734-20707799)
chr5 (301-370)||(25400314-25400379)
chr5 (301-366)||(25648031-25648092)
chr5 (313-370)||(25729399-25729452)
chr5 (301-370)||(29691415-29691480)
chr5 (301-370)||(42916447-42916512)
chr5 (301-370)||(43580936-43581001)
[»] chr4 (31 HSPs)
chr4 (301-370)||(40051680-40051745)
chr4 (301-370)||(2222597-2222662)
chr4 (301-370)||(3036002-3036067)
chr4 (301-370)||(10417168-10417233)
chr4 (301-370)||(13264221-13264286)
chr4 (301-370)||(21935535-21935600)
chr4 (301-370)||(23778772-23778837)
chr4 (301-370)||(39696285-39696350)
chr4 (301-370)||(43271664-43271729)
chr4 (310-370)||(34932553-34932609)
chr4 (336-370)||(27743693-27743727)
chr4 (301-370)||(5179830-5179894)
chr4 (301-370)||(5304957-5305022)
chr4 (301-370)||(10141041-10141106)
chr4 (301-370)||(10402499-10402564)
chr4 (301-370)||(12504590-12504655)
chr4 (301-370)||(12581975-12582040)
chr4 (301-370)||(42231570-42231635)
chr4 (301-370)||(42381060-42381125)
chr4 (301-370)||(42395285-42395350)
chr4 (301-370)||(43147331-43147396)
chr4 (301-370)||(43596953-43597018)
chr4 (301-370)||(46774977-46775042)
chr4 (301-370)||(46998315-46998380)
chr4 (301-370)||(47934019-47934084)
chr4 (301-370)||(48569123-48569188)
chr4 (301-370)||(48950842-48950907)
chr4 (301-370)||(49901540-49901605)
chr4 (301-370)||(53634198-53634263)
chr4 (301-370)||(55021612-55021677)
chr4 (301-370)||(56087901-56087966)
[»] chr3 (36 HSPs)
chr3 (301-370)||(4860219-4860284)
chr3 (301-370)||(4880227-4880292)
chr3 (301-370)||(34898714-34898779)
chr3 (301-370)||(52410188-52410253)
chr3 (302-370)||(48739692-48739756)
chr3 (301-370)||(32429805-32429870)
chr3 (301-370)||(39719993-39720058)
chr3 (301-370)||(41936354-41936419)
chr3 (301-370)||(53432684-53432749)
chr3 (301-369)||(25279006-25279070)
chr3 (302-370)||(32256502-32256566)
chr3 (301-336)||(48887348-48887383)
chr3 (301-360)||(24430217-24430272)
chr3 (311-370)||(45198781-45198836)
chr3 (312-370)||(33225306-33225360)
chr3 (304-370)||(40910130-40910192)
chr3 (301-370)||(44685116-44685180)
chr3 (312-370)||(47098790-47098844)
chr3 (301-370)||(3894602-3894667)
chr3 (301-370)||(4139058-4139123)
chr3 (301-370)||(11820062-11820127)
chr3 (301-370)||(17729049-17729114)
chr3 (301-370)||(18194396-18194461)
chr3 (301-370)||(19030278-19030343)
chr3 (301-370)||(22501878-22501943)
chr3 (301-370)||(30555174-30555239)
chr3 (301-370)||(31528905-31528970)
chr3 (301-370)||(33706674-33706739)
chr3 (301-370)||(37488407-37488472)
chr3 (301-370)||(37800558-37800623)
chr3 (301-370)||(40933778-40933843)
chr3 (301-370)||(42920594-42920659)
chr3 (338-370)||(49983688-49983720)
chr3 (301-370)||(50496761-50496826)
chr3 (301-370)||(53163652-53163717)
chr3 (301-362)||(55007970-55008027)
[»] scaffold0088 (1 HSPs)
scaffold0088 (301-370)||(10773-10838)
[»] scaffold0024 (1 HSPs)
scaffold0024 (301-370)||(59841-59906)
[»] chr7 (24 HSPs)
chr7 (301-370)||(10244836-10244901)
chr7 (301-370)||(12640536-12640601)
chr7 (301-370)||(31077850-31077915)
chr7 (301-370)||(31769459-31769524)
chr7 (301-370)||(32047147-32047212)
chr7 (311-370)||(8174174-8174229)
chr7 (336-370)||(24188528-24188562)
chr7 (311-370)||(30388464-30388519)
chr7 (301-334)||(16861316-16861349)
chr7 (301-370)||(3062832-3062897)
chr7 (301-370)||(4960842-4960907)
chr7 (301-370)||(15106638-15106703)
chr7 (301-370)||(16200617-16200682)
chr7 (301-370)||(21762839-21762904)
chr7 (301-370)||(24061276-24061341)
chr7 (301-370)||(26130129-26130194)
chr7 (301-370)||(29617463-29617528)
chr7 (301-370)||(31026277-31026342)
chr7 (301-370)||(32619408-32619473)
chr7 (301-370)||(35950186-35950251)
chr7 (301-370)||(36174448-36174513)
chr7 (301-370)||(43119379-43119444)
chr7 (317-370)||(48447807-48447856)
chr7 (301-370)||(48719857-48719922)
[»] scaffold0031 (1 HSPs)
scaffold0031 (304-370)||(93932-93994)
[»] scaffold0690 (1 HSPs)
scaffold0690 (301-370)||(3724-3789)
[»] scaffold0445 (1 HSPs)
scaffold0445 (301-370)||(3961-4026)
[»] scaffold0157 (1 HSPs)
scaffold0157 (301-370)||(15822-15887)
[»] scaffold0154 (1 HSPs)
scaffold0154 (311-370)||(1678-1738)
[»] scaffold0128 (1 HSPs)
scaffold0128 (301-370)||(17678-17743)
[»] scaffold0117 (1 HSPs)
scaffold0117 (301-370)||(18426-18491)


Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 33041510 - 33041875
Alignment:
Q  1 aaagcaaaagtcaagaaggtcggccactacatgacaattgcacattgctgcagatcgtagnnnnnnncagtaaccaatttgtggtcctatattagagaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| ||||||||||||||||||||||    
T  33041510 aaagcaaaagtcaagaaggtcggccactacatgacaattgcacattgctgcagattgtagaaaaaaacagtaaccaacttgtggtcctatattagagaat 33041609  T
Q  101 ggagatcaagggcgctaactattatcaattctgaattctttcagaatttgtcagtaatttcagtcaagaaaattgtcctttgtatttgtgaccccataaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  33041610 ggagatcaagggcgctaactattatcaattctgaattctttcagaatttgtcagtaatttcagtcaagaagattgtcctttgtatttctgaccccataaa 33041709  T
Q  201 attgatgtaggattacaatgagacagtgcatatttaaacaattcatgaaacatgtttaatgttattttgttaatcagaaaatgatattggnnnnnnnnnn 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  33041710 attgatgtaggattacaatgagacagtgcatatttaaacaattcatgaaacatgtttaatgttattttgttaatcagaaaatgatattggtttttttttt 33041809  T
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||  |||||||||  |||||||||||||    ||||||||||| |||||||||||||  ||||||||    
T  33041810 gtcaagcagtctagtggttagagctcacaca----atttaattgtgaagaagtagggtgttcggggttcg 33041875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 3439071 - 3439006
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  3439071 gtcaaatagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 3439006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 28153089 - 28153154
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| ||||||| ||||||||    
T  28153089 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggggtgtccggggttcg 28153154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 28194755 - 28194690
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| |||||||||||||||    ||||||||||||||||| ||||||| ||||||||    
T  28194755 gtcaaatagcctagtggctagagctcacacaa----tttaattgtggagaagtggggtgtccggggttcg 28194690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 29449570 - 29449506
Alignment:
Q  302 tcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||| ||||||| || |||||||||||||||||||    ||||||||||||||| ||||||||||||||    
T  29449570 tcaagtagtctaatggctagagctcacacaattta----attgtggagaagtagagtgtctggggttcg 29449506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 44822547 - 44822481
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||   |||||||||||||| | ||||||||||||||    
T  44822547 gtcaagtagcctagtggctagagctcacacaattta---aattgtggagaagtggagtgtctggggttcg 44822481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 22653591 - 22653656
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||| |||||||||| |||    |||||||||||||||||| | ||||| ||||||||    
T  22653591 gtcaaatagtctagtggctagagctcataca----atttaattgtggagaagtggagtgtccggggttcg 22653656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 33228880 - 33228945
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  33228880 gtcaagtagcctagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 33228945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 34614098 - 34614037
Alignment:
Q  305 aatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||| |||||||||||||||||||    ||||||||||||||| ||||| ||||||||    
T  34614098 aatagcctagtggctagagctcacacaattta----attgtggagaagtagagtgtccggggttcg 34614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 37486880 - 37486928
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagt 353  Q
    |||||||||||||||| ||||||||||||||||||    ||||||||||||||    
T  37486880 gtcaaatagtctagtggctagagctcacacaattt----aattgtggagaagt 37486928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 370
Target Start/End: Original strand, 34149658 - 34149692
Alignment:
Q  336 atttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||||||||||||| ||||||||    
T  34149658 atttaattgtggagaagtagggtgtccggggttcg 34149692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 370
Target Start/End: Original strand, 43057898 - 43057932
Alignment:
Q  336 atttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||||||||||||| ||||||||    
T  43057898 atttaattgtggagaagtagggtgtccggggttcg 43057932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 39408648 - 39408702
Alignment:
Q  312 tagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||||||||||    |||||||||||||| | ||||||||||||||    
T  39408648 tagtggctagagctcacacaattt----aattgtggagaagtggagtgtctggggttcg 39408702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 1309073 - 1309138
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  1309073 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 1309138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 1844940 - 1844875
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| ||||||| | ||||||    
T  1844940 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggggtgtccgaggttcg 1844875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 6331684 - 6331619
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  6331684 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 6331619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 11190051 - 11189986
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| ||| || |||||||||||||||||||    ||||||||||||| || |||||||||||||    
T  11190051 gtcaagtagcctaatggctagagctcacacaattta----attgtggagaagtgggatgtctggggttcg 11189986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 18278364 - 18278429
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||| ||||    
T  18278364 gtcaaatagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccgggattcg 18278429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 18694908 - 18694843
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||||||| ||||    
T  18694908 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtctgggattcg 18694843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 20296541 - 20296476
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  20296541 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 20296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 36005565 - 36005500
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| ||| || |||||||||||||||||||    ||||||||||||| | ||||||||||||||    
T  36005565 gtcaagtagcctattggctagagctcacacaattta----attgtggagaagtggagtgtctggggttcg 36005500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 38400437 - 38400372
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| |||||||  |||||||    
T  38400437 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggggtgtccagggttcg 38400372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 40535396 - 40535461
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  40535396 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 40535461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 41509639 - 41509574
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  41509639 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 41509574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 44186566 - 44186501
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||| ||| |||||||||||||||    ||||||||||||||||| ||||||| | ||||||    
T  44186566 gtcaagtagtctggtggctagagctcacacaa----tttaattgtggagaagtggggtgtccgaggttcg 44186501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 22997459 - 22997394
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||||||    ||||||||||||||||||||| ||||||||    
T  22997459 gtcaagtagtctagtggctagagctcacacaattta----attgtggagaagtagggtgtccggggttcg 22997394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 23790942 - 23791007
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||||||    |||||||||||||||||||||| ||||||||    
T  23790942 gtcaagtagtctagtggctagagctcacacaattt----aattgtggagaagtagggtgtccggggttcg 23791007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 7177418 - 7177353
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||    | ||||||||||||||||| ||||||||||||||||    
T  7177418 gtcaagtagcctagtggctagagctcacac----tgtttaattgtggagaagtggggtgtctggggttcg 7177353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 7545452 - 7545387
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| ||||||  ||||||||    
T  7545452 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggggtgttcggggttcg 7545387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 7581167 - 7581102
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||    |||||||||||||| ||||||||| |||||    
T  7581167 gtcaagtagcctagtggctagagctcacacaattta----attgtggagaagtaaggtgtctggcgttcg 7581102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 31802176 - 31802111
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  31802176 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 31802111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 26347527 - 26347464
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggtt 368  Q
    ||||| |||||||||| ||||||||||||||    ||| |||||||||||||| | ||||||||||||    
T  26347527 gtcaagtagtctagtggctagagctcacaca----attaaattgtggagaagtggagtgtctggggtt 26347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 13158667 - 13158721
Alignment:
Q  312 tagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  13158667 tagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 13158721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 13163523 - 13163577
Alignment:
Q  312 tagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  13163523 tagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 13163577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 743686 - 743621
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||| |||||||||    ||||||||||||| | ||||| ||||||||    
T  743686 gtcaagtagtctagtggctagagctcgcacaattta----attgtggagaagtggagtgtccggggttcg 743621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 2817013 - 2816948
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| ||||||| || |||||    
T  2817013 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggggtgtccggagttcg 2816948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 10517322 - 10517257
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  10517322 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 10517257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 13116571 - 13116636
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||  ||||||| ||||||||    
T  13116571 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagaggggtgtccggggttcg 13116636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 19953775 - 19953840
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  19953775 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 19953840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 27219007 - 27218942
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  27219007 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 27218942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 28148680 - 28148745
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  28148680 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 28148745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 31803542 - 31803607
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    ||||||||||||||||||  ||||||  |||||||    
T  31803542 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtgaggtgtccagggttcg 31803607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 32611501 - 32611566
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  32611501 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 32611566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 33646958 - 33646893
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| ||||||| | ||||||    
T  33646958 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggggtgtccgaggttcg 33646893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 24333691 - 24333622
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||| || || ||||||||||||||||||| || ||||||||||||| | |||| |||||||||    
T  24333691 gtcaaatagtttaatggctagagctcacacaatttaattgattgtggagaagtggagtgtttggggttcg 24333622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 2754483 - 2754418
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||| ||||| |||||||||||||||||||    ||||||||||||||||||||| ||||||||    
T  2754483 gtcaagtagtttagtggctagagctcacacaattta----attgtggagaagtagggtgtccggggttcg 2754418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 7180561 - 7180626
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  7180561 gtcaagtagcctagtgactagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 7180626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 21265779 - 21265714
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||    ||||||||||||| ||||||| ||||||||    
T  21265779 gtcaagtagcctagtggctagagctcacacaattta----attgtggagaagtggggtgtccggggttcg 21265714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 44732756 - 44732691
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||| ||||||||||||    ||||||||||||| ||||||| ||||||||    
T  44732756 gtcaagtagtctagtggctagagttcacacaattta----attgtggagaagtggggtgtccggggttcg 44732691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 48638655 - 48638590
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||     ||||||||||||||||| ||||||||||||||||    
T  48638655 gtcaagtagcctagtggctagagctcacaca----gtttaattgtggagaagtggggtgtctggggttcg 48638590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 23234068 - 23234009
Alignment:
Q  307 tagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||| | ||||||||||||||  ||||  || ||||||||||||||||||||||||||||    
T  23234068 tagtctagcggctagagctcacaca--ttat--aaatgtggagaagtagggtgtctggggttcg 23234009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 40375262 - 40375328
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcgt 371  Q
    ||||| ||| ||||||  |||||||||||||||||    |||||||||||||||| ||||| |||||||||    
T  40375262 gtcaagtagcctagtggttagagctcacacaattt----aattgtggagaagtagagtgtccggggttcgt 40375328  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 1570139 - 1570204
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  1570139 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 1570204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 3560328 - 3560393
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    ||| |||||||||||||| | || |||||||||||    
T  3560328 gtcaagtagtctagtggctagagctcacaca----attaaattgtggagaagtggagtatctggggttcg 3560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 6438011 - 6438076
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  6438011 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 6438076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 7191155 - 7191090
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    |||||||||||||||||  |||||| ||||||||    
T  7191155 gtcaagtaggctagtggctagagctcacacaa----tttaattgtggagaagtgaggtgtccggggttcg 7191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 11215124 - 11215059
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  11215124 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagtggagtgtctggggttcg 11215059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 12048071 - 12048136
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| ||||||| ||| ||||    
T  12048071 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggggtgtccgggattcg 12048136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 12650331 - 12650396
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| ||||||| || |||||    
T  12650331 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggggtgtccggagttcg 12650396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 15819548 - 15819613
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  15819548 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 15819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 25999973 - 25999908
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| || ||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  25999973 gtcaagtaatctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 25999908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 27642674 - 27642739
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | |||||  |||||||    
T  27642674 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccagggttcg 27642739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 28564292 - 28564357
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| ||||||| | ||||||    
T  28564292 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggggtgtccgaggttcg 28564357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 29188759 - 29188694
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | || || ||||||||    
T  29188759 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtatccggggttcg 29188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 32594374 - 32594309
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  32594374 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 32594309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 34557275 - 34557326
Alignment:
Q  305 aatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtc 361  Q
    |||||||||||| |||||||||||||     |||||| |||||||||||||||||||    
T  34557275 aatagtctagtggctagagctcacac-----atttaaatgtggagaagtagggtgtc 34557326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 39346926 - 39346991
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| ||||| ||||||||    |||||||||||||||||| | ||||| ||||||||    
T  39346926 gtcaaatagcctagtggctagaactcacaca----atttaattgtggagaagtggagtgtccggggttcg 39346991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 40519490 - 40519555
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  40519490 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 40519555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 45333659 - 45333724
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  45333659 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagtggagtgtctggggttcg 45333724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 21133130 - 21133065
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  21133130 gtcaagtagactagtggctagagctcacacaattta----attgtggagaagtggggtgtctggggttcg 21133065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 38344172 - 38344107
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | ||||||||||||||    
T  38344172 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtctggggttcg 38344107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 1337062 - 1337127
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  1337062 gtcaaatagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 1337127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 5571017 - 5570952
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||| ||||||    ||||||||||||| ||||||| ||||||||    
T  5571017 gtcaagtagtctagtggctagagctcacataattta----attgtggagaagtggggtgtccggggttcg 5570952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 6942478 - 6942543
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  6942478 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 6942543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 44673595 - 44673660
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    ||||||||||||| |||| | ||||||||||||||    
T  44673595 gtcaagtagtctagtggctagagctcacaca----atttaattgtggaaaagtggagtgtctggggttcg 44673660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 10568208 - 10568144
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttc 369  Q
    ||||| ||| |||||| |||||||||||||||||||    ||||||||||||| ||||||| |||||||    
T  10568208 gtcaagtagcctagtggctagagctcacacaattta----attgtggagaagtggggtgtccggggttc 10568144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 5333033 - 5332974
Alignment:
Q  307 tagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  5333033 tagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 5332974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 37291035 - 37290980
Alignment:
Q  311 ctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||| |||||||||||||||||||    ||||||||||||| ||||||| ||||||||    
T  37291035 ctagtggctagagctcacacaattta----attgtggagaagtggggtgtccggggttcg 37290980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 370
Target Start/End: Original strand, 38107452 - 38107486
Alignment:
Q  336 atttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||||| ||||||||||||||||    
T  38107452 atttaattgtggagaagtggggtgtctggggttcg 38107486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 11491914 - 11491856
Alignment:
Q  307 tagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttc 369  Q
    |||||||||| |||||||||||||||    ||||||||||||||||| | ||||| |||||||    
T  11491914 tagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttc 11491856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 22274559 - 22274623
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||     |||||||||||||| ||||||| ||||||||    
T  22274559 gtcaagtagcctagtggctagagctcacacaatt-----aattgtggagaagtggggtgtccggggttcg 22274623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 2787028 - 2787093
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  2787028 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 2787093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 8034359 - 8034424
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||| ||||||||||||    |||||||||||||| |||||||||| |||||    
T  8034359 gtcaagtagcctagtggctagaactcacacaattt----aattgtggagaagtggggtgtctggtgttcg 8034424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 10736821 - 10736886
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  10736821 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 10736886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 13647404 - 13647469
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    ||| |||||||||||||| | ||||| ||||||||    
T  13647404 gtcaagtagtctagtggctagagctcacaca----attaaattgtggagaagtggagtgtccggggttcg 13647469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 13747829 - 13747894
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    ||| |||||||||||||| | ||||| ||||||||    
T  13747829 gtcaagtagtctagtggctagagctcacaca----attaaattgtggagaagtggagtgtccggggttcg 13747894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 16449248 - 16449183
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  16449248 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagtggagtgtctggggttcg 16449183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 17072510 - 17072575
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| ||||||  ||||||||    
T  17072510 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggggtgttcggggttcg 17072575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 17575761 - 17575696
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| ||||||  ||||||||    
T  17575761 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggggtgttcggggttcg 17575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 28909588 - 28909523
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  28909588 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 28909523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 34472420 - 34472355
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||  ||||||||||||||    |||||||||||| |||| | ||||||||||||||    
T  34472420 gtcaagtagtctagtggttagagctcacacaa----tttaattgtggaaaagtggagtgtctggggttcg 34472355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 37717486 - 37717421
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  37717486 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 37717421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 38219515 - 38219580
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  38219515 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 38219580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 39169608 - 39169543
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  39169608 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagttgagtgtctggggttcg 39169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 43186976 - 43186911
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  43186976 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 43186911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 43283913 - 43283978
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||| | | ||||| ||||||||    
T  43283913 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaaatggagtgtccggggttcg 43283978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 27798744 - 27798679
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| |||||||||||||||    ||||||||||||||||||| ||||| ||||||||    
T  27798744 gtcaaatagcctagtggctagagctcacacaa----tttaattgtggagaagtagagtgtccggggttcg 27798679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 16789192 - 16789128
Alignment:
Q  302 tcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||| |||||||||| |||||||||||||||||||    ||||||||||||| ||||||| ||||||||    
T  16789192 tcaagtagtctagtggctagagctcacacaattta----attgtggagaagtggggtgtccggggttcg 16789128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 42525520 - 42525458
Alignment:
Q  304 aaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  42525520 aaatagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 42525458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 6558924 - 6558859
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||    ||||||||||||||||||||| || |||||    
T  6558924 gtcaagtagcctagtgactagagctcacacaattta----attgtggagaagtagggtgtccggagttcg 6558859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 11897371 - 11897306
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  11897371 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 11897306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 15241519 - 15241454
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| ||||||| | ||||||    
T  15241519 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggggtgtccgaggttcg 15241454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 16603521 - 16603456
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| |||| || |||||||||||    ||||||||||||||| ||||||||||||||    
T  16603521 gtcaaatagcctagtgactagggcgcacacaattta----attgtggagaagtagagtgtctggggttcg 16603456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 18026775 - 18026840
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||| ||||| ||||||||||||||    |||||||||||||||||| ||| ||| ||||||||    
T  18026775 gtcaaatagtatagtggctagagctcacaca----atttaattgtggagaagtggggagtccggggttcg 18026840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 39886159 - 39886224
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  39886159 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 39886224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 41319398 - 41319463
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  41319398 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 41319463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 11786008 - 11786072
Alignment:
Q  302 tcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||| |||||||||| ||||||||||||||    |||||||||||||||||| | |||| |||||||||    
T  11786008 tcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtgtggggttcg 11786072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 41930218 - 41930163
Alignment:
Q  311 ctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||| |||||||||||||||||||    ||||| ||||||| ||||||||||||||||    
T  41930218 ctagtggctagagctcacacaattta----attgtagagaagtggggtgtctggggttcg 41930163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 4153664 - 4153614
Alignment:
Q  307 tagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtc 361  Q
    |||||||||| |||||||||||||||    ||||||||||||||||||| |||||    
T  4153664 tagtctagtggctagagctcacacaa----tttaattgtggagaagtagagtgtc 4153614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 10241419 - 10241386
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatt 334  Q
    |||||||||||||||| |||||||||||||||||    
T  10241419 gtcaaatagtctagtggctagagctcacacaatt 10241386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 34208496 - 34208432
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||| |||||||||||     |||||||||||||| ||||||||||||||||    
T  34208496 gtcaagtagcctagtggctagaactcacacaatt-----aattgtggagaagtggggtgtctggggttcg 34208432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 4745823 - 4745888
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  4745823 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 4745888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 7171818 - 7171786
Alignment:
Q  338 ttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||| ||||||||||||||||    
T  7171818 ttaattgtggagaagtggggtgtctggggttcg 7171786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 8968872 - 8968807
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  8968872 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 8968807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 9835156 - 9835091
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  9835156 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 9835091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 11795616 - 11795551
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  11795616 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 11795551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 12463879 - 12463814
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  12463879 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 12463814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 16386688 - 16386753
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | || || ||||||||    
T  16386688 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtatccggggttcg 16386753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 20707734 - 20707799
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||| |||| || ||||||||||||||    ||||||||||||||||||   ||||||||||||||    
T  20707734 gtcaaataatctaatggctagagctcacaca----atttaattgtggagaagtgaagtgtctggggttcg 20707799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 25400314 - 25400379
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  25400314 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 25400379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 25648031 - 25648092
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctgggg 366  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||||||||    
T  25648031 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtctgggg 25648092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 25729399 - 25729452
Alignment:
Q  313 agtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||| ||||||||||||||||||    |||||||||||||| | ||||||||||||||    
T  25729399 agtggctagagctcacacaattt----aattgtggagaagtggagtgtctggggttcg 25729452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 29691480 - 29691415
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| |||||||  |||||||    
T  29691480 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggggtgtccagggttcg 29691415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 42916512 - 42916447
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||| ||||| ||| |||||||||||||||    ||||||||||||| ||||||| ||||||||    
T  42916512 gtcaagtagtttagtggctaaagctcacacaattta----attgtggagaagtggggtgtccggggttcg 42916447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 43581001 - 43580936
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||| ||||    
T  43581001 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccgggattcg 43580936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 40051745 - 40051680
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  40051745 gtcaagtagcctagtggctagagctcacacaattta----attgtggagaagtggggtgtctggggttcg 40051680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 2222662 - 2222597
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||    ||||||||||||| ||||||| ||||||||    
T  2222662 gtcaagtagcctagtggctagagctcacacaattta----attgtggagaagtggggtgtccggggttcg 2222597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 3036002 - 3036067
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  3036002 gtcaagtagcctagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 3036067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 10417168 - 10417233
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  10417168 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 10417233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 13264221 - 13264286
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    ||||||||||| |||||| ||||||| ||||||||    
T  13264221 gtcaagtagtctagtggctagagctcacaca----atttaattgtgaagaagtggggtgtccggggttcg 13264286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 21935600 - 21935535
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||| |||||||||||||||    ||||||||||||| ||||||| ||||||||    
T  21935600 gtcaagtagtctagtggctaaagctcacacaattta----attgtggagaagtggggtgtccggggttcg 21935535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 23778772 - 23778837
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||| |||||  |||||||||||||||||    |||||||||||||| ||||||||||||||||    
T  23778772 gtcaagtagtttagtggttagagctcacacaattt----aattgtggagaagtggggtgtctggggttcg 23778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 39696285 - 39696350
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||||| ||||  ||||||||    
T  39696285 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtagagtgttcggggttcg 39696350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 43271664 - 43271729
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||| ||||||||||||||    |||||||||||||| ||||||||||||||||    
T  43271664 gtcaagtagcctagtggctatagctcacacaattt----aattgtggagaagtggggtgtctggggttcg 43271729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 370
Target Start/End: Complemental strand, 34932609 - 34932553
Alignment:
Q  310 tctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||| |||||||||| ||||||||    |||||||||||||||||||| |||||||||    
T  34932609 tctagtggctagagctcatacaattta----attgtggagaagtagggtgtttggggttcg 34932553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 370
Target Start/End: Original strand, 27743693 - 27743727
Alignment:
Q  336 atttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||||||||||||| ||||||||    
T  27743693 atttaattgtggagaagtagggtgtccggggttcg 27743727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 5179830 - 5179894
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||| |||||||||||||||||    |||||||||||||| | ||||| ||||||||    
T  5179830 gtcaagtagtctagtgt-tagagctcacacaattt----aattgtggagaagtggagtgtccggggttcg 5179894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 5304957 - 5305022
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  5304957 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 5305022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 10141106 - 10141041
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  10141106 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 10141041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 10402564 - 10402499
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    |||||||||||||||||  |||||| ||||||||    
T  10402564 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtgaggtgtccggggttcg 10402499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 12504590 - 12504655
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||||||| || ||||||||||||||    |||||||||||||||||| | || || ||||||||    
T  12504590 gtcaaatagtctaatggctagagctcacaca----atttaattgtggagaagtggagtatccggggttcg 12504655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 12581975 - 12582040
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  12581975 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 12582040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 42231635 - 42231570
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  42231635 gtcaagtagcctagtgactagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 42231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 42381060 - 42381125
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||| ||||||||||||||    |||||||||||||| ||||||||| ||||||    
T  42381060 gtcaagtagcctagtggctaaagctcacacaattt----aattgtggagaagtggggtgtctgaggttcg 42381125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 42395350 - 42395285
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||| |||||||||||    ||||||||||||||||| ||||||| || |||||    
T  42395350 gtcaagtagtctagtggctaaagctcacacaa----tttaattgtggagaagtggggtgtccggagttcg 42395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 43147331 - 43147396
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  43147331 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 43147396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 43597018 - 43596953
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  43597018 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 43596953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 46774977 - 46775042
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  46774977 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 46775042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 46998315 - 46998380
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||| || ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  46998315 gtcaagtagtctaatggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 46998380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 47934019 - 47934084
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    ||| |||||||||||||| | ||||| ||||||||    
T  47934019 gtcaagtagtctagtggctagagctcacaca----attaaattgtggagaagtggagtgtccggggttcg 47934084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 48569123 - 48569188
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  48569123 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagtggagtgtctggggttcg 48569188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 48950907 - 48950842
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  48950907 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 48950842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 49901605 - 49901540
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||  ||||||| ||||||||    
T  49901605 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagcggggtgtccggggttcg 49901540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 53634198 - 53634263
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  53634198 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 53634263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 55021677 - 55021612
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    |||||||||||||||||   ||||| ||||||||    
T  55021677 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtgaagtgtccggggttcg 55021612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 56087901 - 56087966
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||| ||||||||    |||||||||||||||||| ||||||| ||| ||||    
T  56087901 gtcaagtagtctagtggctagaactcacaca----atttaattgtggagaagtggggtgtccgggattcg 56087966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 4860284 - 4860219
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||  ||||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  4860284 gtcaagtagtctagtggttagagctcacacaattta----attgtggagaagtggggtgtctggggttcg 4860219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 4880292 - 4880227
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||  ||||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  4880292 gtcaagtagtctagtggttagagctcacacaattta----attgtggagaagtggggtgtctggggttcg 4880227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 34898714 - 34898779
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| || ||||||| ||||||||||||||||||    |||||||||||||| ||||||||||||||||    
T  34898714 gtcaagtaatctagtggctagagctcacacaattt----aattgtggagaagtggggtgtctggggttcg 34898779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 52410188 - 52410253
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | ||||||||||||||    
T  52410188 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtctggggttcg 52410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 48739692 - 48739756
Alignment:
Q  302 tcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||| |||||||||| ||||||||||||||     ||||||||||||||||| ||||||||||||||||    
T  48739692 tcaagtagtctagtggctagagctcacaca----gtttaattgtggagaagtggggtgtctggggttcg 48739756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 32429870 - 32429805
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| ||||||  ||||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  32429870 gtcaagtagcctagtggttagagctcacacaattta----attgtggagaagtggggtgtctggggttcg 32429805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 39720058 - 39719993
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||||||    ||||||||||||| ||||||| ||||||||    
T  39720058 gtcaagtagcctagtggctagagctcacacaattta----attgtggagaagtggggtgtccggggttcg 39719993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 41936354 - 41936419
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  41936354 gtcaagtagcctagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 41936419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 53432684 - 53432749
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  53432684 gtcaagtagcctagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 53432749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 25279006 - 25279070
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttc 369  Q
    |||||||| || |||| ||||||||||||||||||    |||||||||||||| ||||||| |||||||    
T  25279006 gtcaaataatcgagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttc 25279070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 32256502 - 32256566
Alignment:
Q  302 tcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||| |||| ||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  32256502 tcaagtagtttagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 32256566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 336
Target Start/End: Original strand, 48887348 - 48887383
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaattta 336  Q
    |||||||||||||||| |||||||||||||||||||    
T  48887348 gtcaaatagtctagtggctagagctcacacaattta 48887383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 24430272 - 24430217
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgt 360  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| ||||||    
T  24430272 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggggtgt 24430217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 45198836 - 45198781
Alignment:
Q  311 ctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||| |||||||||||||||||||    ||||||||||||||| ||||||| ||||||    
T  45198836 ctagtggctagagctcacacaattta----attgtggagaagtagagtgtctgaggttcg 45198781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 33225306 - 33225360
Alignment:
Q  312 tagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||||||||||||||    |||||||||||||| | ||||||||||||||    
T  33225306 tagtggctagagctcacacaattt----aattgtggagaagtggagtgtctggggttcg 33225360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 370
Target Start/End: Original strand, 40910130 - 40910192
Alignment:
Q  304 aaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||| |||||| |||||||||||||||| ||    ||||||||||||| | ||||||||||||||    
T  40910130 aaatagcctagtggctagagctcacacaatata----attgtggagaagtggagtgtctggggttcg 40910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 44685116 - 44685180
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||| |||||||||||     |||||||||||||| |||||| |||||||||    
T  44685116 gtcaagtagtctagtggctagaactcacacaatt-----aattgtggagaagtggggtgtttggggttcg 44685180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 47098844 - 47098790
Alignment:
Q  312 tagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||||||||||||    ||||||||||||| | ||||||||||||||    
T  47098844 tagtggctagagctcacacaattta----attgtggagaagtggagtgtctggggttcg 47098790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 3894667 - 3894602
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | ||||| || |||||    
T  3894667 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggagttcg 3894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 4139123 - 4139058
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  4139123 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 4139058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 11820127 - 11820062
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | || || ||||||||    
T  11820127 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtttccggggttcg 11820062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 17729114 - 17729049
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | |||||  |||||||    
T  17729114 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccagggttcg 17729049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 18194461 - 18194396
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  18194461 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 18194396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 19030343 - 19030278
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | |||||  |||||||    
T  19030343 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccagggttcg 19030278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 22501878 - 22501943
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  22501878 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagtggagtgtctggggttcg 22501943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 30555174 - 30555239
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  30555174 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 30555239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 31528905 - 31528970
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| |||||||||| |||||||    |||||||||||||| | ||||| ||||||||    
T  31528905 gtcaaatagcctagtggctagagctcatacaattt----aattgtggagaagtggagtgtccggggttcg 31528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 33706674 - 33706739
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  33706674 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 33706739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 37488407 - 37488472
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  37488407 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 37488472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 37800558 - 37800623
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  37800558 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 37800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 40933778 - 40933843
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  40933778 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 40933843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 42920594 - 42920659
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| | ||||||||||||||||    |||||||||||||| | ||||||||||||||    
T  42920594 gtcaagtagcctagtggccagagctcacacaattt----aattgtggagaagtggagtgtctggggttcg 42920659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 49983688 - 49983720
Alignment:
Q  338 ttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||||||||||| ||||||||    
T  49983688 ttaattgtggagaagtagggtgtccggggttcg 49983720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 50496761 - 50496826
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  50496761 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 50496826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 53163717 - 53163652
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    |||||||| |||||||| ||||||| ||||||||    
T  53163717 gtcaagtagcctagtggctagagctcacacaa----tttaattgcggagaagtggggtgtccggggttcg 53163652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 55007970 - 55008027
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtct 362  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||||| ||||||    
T  55007970 gtcaattagcctagtggctagagctcacaca----atttaattgtggagaagtagagtgtct 55008027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 10773 - 10838
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  10773 gtcaagtagcctagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 10838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 59906 - 59841
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  59906 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 59841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 10244836 - 10244901
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  10244836 gtcaagtagcctagtggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 10244901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 12640536 - 12640601
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||||    |||||||||||||| | ||||||||||||||    
T  12640536 gtcaagtagcctagtggctagagctcacacaattt----aattgtggagaagtggagtgtctggggttcg 12640601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 31077850 - 31077915
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | ||||| ||||||||    
T  31077850 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgtccggggttcg 31077915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 31769459 - 31769524
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||| ||||||||||||||    |||||||||||||||| ||||||||||||||    
T  31769459 gtcaagtagcctagtggctaaagctcacacaattt----aattgtggagaagtagagtgtctggggttcg 31769524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 32047212 - 32047147
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||| |||||| |||||||||||||||    |||||||||||||||||  |||||| ||||||||    
T  32047212 gtcaaatagcctagtggctagagctcacacaa----tttaattgtggagaagtgaggtgtccggggttcg 32047147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 8174229 - 8174174
Alignment:
Q  311 ctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||| |||||||||||||||||||    ||||||||||||||| ||||| ||||||||    
T  8174229 ctagtggctagagctcacacaattta----attgtggagaagtagagtgtccggggttcg 8174174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 370
Target Start/End: Complemental strand, 24188562 - 24188528
Alignment:
Q  336 atttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||||||||||||||| ||||||||||||||||    
T  24188562 atttaattgtggagaagtggggtgtctggggttcg 24188528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 30388464 - 30388519
Alignment:
Q  311 ctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||| ||||||||||||||||||    |||||||||||||| | ||||||||||||||    
T  30388464 ctagtggctagagctcacacaattt----aattgtggagaagtggagtgtctggggttcg 30388519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 16861316 - 16861349
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatt 334  Q
    |||||||||||||||| |||||||||||||||||    
T  16861316 gtcaaatagtctagtggctagagctcacacaatt 16861349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 3062897 - 3062832
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  3062897 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 3062832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 4960907 - 4960842
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  4960907 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtcaggggttcg 4960842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 15106638 - 15106703
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||||||| || ||| ||||||||||||||    |||||||||||||| | ||||||||||||||    
T  15106638 gtcaagtagtctactggctaaagctcacacaattt----aattgtggagaagtggagtgtctggggttcg 15106703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 16200682 - 16200617
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||  |||||| ||||||||||||    ||||||||||| | ||||||||||||||||    
T  16200682 gtcaagtagtctagtagctagagatcacacaattta----attgtggagaaatggggtgtctggggttcg 16200617  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 21762839 - 21762904
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| |||| |||| ||||||    
T  21762839 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggggtctctgaggttcg 21762904  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 24061276 - 24061341
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||||||||||||||    |||||||||||||||||| | ||||  ||||||||    
T  24061276 gtcaagtagtctagtggctagagctcacaca----atttaattgtggagaagtggagtgttcggggttcg 24061341  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 26130129 - 26130194
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| ||| |||| |||||||||    |||||||||||||||||||||  ||||||||    
T  26130129 gtcaagtagtctagtgactaaagctaacacaattt----aattgtggagaagtagggtgttcggggttcg 26130194  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 29617528 - 29617463
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  29617528 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 29617463  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 31026342 - 31026277
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  31026342 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 31026277  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 32619473 - 32619408
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  32619473 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 32619408  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 35950251 - 35950186
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  35950251 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 35950186  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 36174513 - 36174448
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| |||||||||| |||||||||||||||    |||||||||||| |||| | ||||| ||||||||    
T  36174513 gtcaagtagtctagtggctagagctcacacaa----tttaattgtggaaaagtggagtgtccggggttcg 36174448  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 43119379 - 43119444
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||    |||||||||||||||||| |||||||  |||||||    
T  43119379 gtcaagtagcctagtggctagagctcacaca----atttaattgtggagaagtggggtgtccagggttcg 43119444  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 48447856 - 48447807
Alignment:
Q  317 tctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||||||||||||||    ||||||||||||| | ||||||||||||||    
T  48447856 tctagagctcacacaattta----attgtggagaagtggagtgtctggggttcg 48447807  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 48719922 - 48719857
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  48719922 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagtggagtgtctggggttcg 48719857  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 370
Target Start/End: Original strand, 93932 - 93994
Alignment:
Q  304 aaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||||||| |||||||||| |||    |||||||||||||||||| ||||||| || |||||    
T  93932 aaatagtctagtggctagagctcataca----atttaattgtggagaagtggggtgtccggagttcg 93994  T

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Target: scaffold0690 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 3789 - 3724
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  3789 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 3724  T

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Target: scaffold0445 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 3961 - 4026
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| ||||||||||||||||| |    ||||||||||||| | ||||||||||||||    
T  3961 gtcaagtagcctagtggctagagctcacacaattaa----attgtggagaagtggagtgtctggggttcg 4026  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 15887 - 15822
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||||||||||| || |||||||||||||||    ||||||||||||||||| | || || ||||||||    
T  15887 gtcaaatagtctaatggctagagctcacacaa----tttaattgtggagaagtggagtatccggggttcg 15822  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 1678 - 1738
Alignment:
Q  311 ctagtgtctagagctcacacaattta-tttaattgtggagaagtagggtgtctggggttcg 370  Q
    |||||| |||||| |||||||||| | ||||||||||||||||| | ||||| ||||||||    
T  1678 ctagtggctagagatcacacaattaaatttaattgtggagaagtggagtgtccggggttcg 1738  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 17743 - 17678
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| |||||| |||||||||||||||    ||||||||||||||||| | ||||| ||||||||    
T  17743 gtcaagtagcctagtggctagagctcacacaa----tttaattgtggagaagtggagtgtccggggttcg 17678  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 18426 - 18491
Alignment:
Q  301 gtcaaatagtctagtgtctagagctcacacaatttatttaattgtggagaagtagggtgtctggggttcg 370  Q
    ||||| ||| ||| || ||||||||||||||||||    |||||||||||||| ||||||| ||||||||    
T  18426 gtcaagtagcctaatggctagagctcacacaattt----aattgtggagaagtggggtgtccggggttcg 18491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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