View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14212_low_11 (Length: 380)
Name: NF14212_low_11
Description: NF14212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14212_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 16 - 363
Target Start/End: Original strand, 7213139 - 7213508
Alignment:
| Q |
16 |
atgagggtaataaattaatggaatgtagcggggaaataaaacagtgacatccatgtcttttggaatcaagacaaacatcaaagacaagatgaggcatttc |
115 |
Q |
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| T |
7213139 |
atgagggtaataaattaatggaatgtagcggggaaataaaacagtgacatccatgtcttttggaatcaagacaaacatcaaagacaagatgaggcatttc |
7213238 |
T |
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| Q |
116 |
cctactcagcaacataacgttactttgattttaagtacgcctgattaagtagtagataatttacttatttagtcttaagtagtttatgtattcacaaaat |
215 |
Q |
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| T |
7213239 |
cctactcagcaacataacgttactttgatattaagtacgcctgattaagtagtagataatttacttatttagtcttaagtagtttatgtattcacaaaat |
7213338 |
T |
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| Q |
216 |
tagcaacct----------------------acaatgacaccaacaagagactaagacatcactatacgatccaaaataccaagacattgagaatataga |
293 |
Q |
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| T |
7213339 |
tagcaacctacaatgacccaagtgacaacccacaatgacaccaacaagagactaaaacatcactatacgatccaaaatactaagacattgagaatataga |
7213438 |
T |
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| Q |
294 |
ttacttctcttataaacaagaggttgctatttaaagggaaagattttatcaagaaagcatagcgaaagat |
363 |
Q |
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| T |
7213439 |
ttacttcttttataaacaagaggttgctatttaaagtgaaagattttatcaagaaagtatagcgaaagat |
7213508 |
T |
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